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Delete app.py
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app.py
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import gradio as gr
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from mhnreact.inspect import list_models, load_clf
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from rdkit.Chem import rdChemReactions as Reaction
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from rdkit.Chem.Draw import rdMolDraw2D
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from PIL import Image, ImageDraw
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from ssretro_template import ssretro
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def get_output(p):
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rxn = Reaction.ReactionFromSmarts(p, useSmiles=False)
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d = rdMolDraw2D.MolDraw2DCairo(800, 200)
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d.DrawReaction(rxn, highlightByReactant=False)
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d.FinishDrawing()
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text = d.GetDrawingText()
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return text
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def ssretro_prediction(molecule):
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model_fn = list_models()[0]
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retro_clf = load_clf(model_fn)
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outputs = ssretro(molecule, retro_clf)
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predict, txt = [], []
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for pred in outputs:
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txt.append(f'predicted top-{pred["template_rank"]-1}, prob: {pred["prob"]:2.1f}%; {pred["reaction"]}')
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predict.append(get_output(pred["reaction"]))
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return predict, txt
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def mhn_react_backend(mol):
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output_dir = "outputs"
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formatter = "03d"
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images = []
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predictions, comments = ssretro_prediction(mol)
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for i in range(len(predictions)):
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output_im = f"{str(output_dir)}/{format(i, formatter)}.png"
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with open(output_im, "wb") as fh:
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fh.write(predictions[i])
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fh.close()
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img = Image.open(output_im)
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I1 = ImageDraw.Draw(img)
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I1.text((20, 10), comments[i], fill=(30, 0, 44))
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images.append(img)
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img.save(output_im)
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return images
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demo = gr.Interface(fn=mhn_react_backend, inputs="text", outputs="gallery")
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demo.launch()
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