Spaces:
Sleeping
Sleeping
Update app.py
Browse files
app.py
CHANGED
@@ -51,32 +51,32 @@ default_values = {
|
|
51 |
interface = gr.Interface(
|
52 |
fn=demo,
|
53 |
inputs=[
|
54 |
-
gr.File(label="SPM Upload CSV file"
|
55 |
-
gr.Textbox(label="SPM identifier_column",
|
56 |
-
gr.Textbox(label="SPM sequence_column",
|
57 |
-
gr.Dropdown(label="SPM sortby", choices=["S-Support", "I-Support"],
|
58 |
-
gr.Number(label="SPM sliding_window_min",
|
59 |
-
gr.Number(label="SPM sliding_window_max",
|
60 |
-
gr.Number(label="SPM min_gap",
|
61 |
-
gr.Number(label="SPM max_gap",
|
62 |
-
gr.Number(label="SPM S_support_thresh",
|
63 |
-
gr.Number(label="SPM I_support_thresh",
|
64 |
-
gr.Number(label="SPM dataset_format",
|
65 |
-
gr.File(label="DSM Upload CSV file for left Dataset",
|
66 |
-
gr.File(label="DSM Upload CSV file for right Dataset",
|
67 |
-
gr.Textbox(label="DSM identifier_column",
|
68 |
-
gr.Textbox(label="DSM sequence_column",
|
69 |
-
gr.Dropdown(label="DSM sortby", choices=["S-Support", "I-Support"],
|
70 |
-
gr.Number(label="DSM sliding_window_min",
|
71 |
-
gr.Number(label="DSM sliding_window_max",
|
72 |
-
gr.Number(label="DSM min_gap",
|
73 |
-
gr.Number(label="DSM max_gap",
|
74 |
-
gr.Number(label="DSM S_support_thresh",
|
75 |
-
gr.Number(label="DSM I_support_thresh",
|
76 |
-
gr.Number(label="DSM threshold_pvalue",
|
77 |
-
gr.Number(label="DSM dataset_format",
|
78 |
-
gr.Dropdown(label="DSM test_type", choices=["poisson_means_test", "ttest_ind", "mannwhitneyu", "bws_test", "ranksums", "brunnermunzel", "mood", "ansari", "cramervonmises_2samp", "epps_singleton_2samp", "ks_2samp", "kstest"],
|
79 |
-
gr.Dropdown(label="Select method for which you want to view result", choices=["SPM", "DSM"],
|
80 |
],
|
81 |
outputs=[gr.File(label="SPM result"), gr.File(label="DSM result"), "dataframe"],
|
82 |
title="SPM And DSM Implementation in Python"
|
|
|
51 |
interface = gr.Interface(
|
52 |
fn=demo,
|
53 |
inputs=[
|
54 |
+
gr.File(label="SPM Upload CSV file"),
|
55 |
+
gr.Textbox(label="SPM identifier_column", value="Identifier"),
|
56 |
+
gr.Textbox(label="SPM sequence_column", value="Sequence"),
|
57 |
+
gr.Dropdown(label="SPM sortby", choices=["S-Support", "I-Support"], value="S-Support"),
|
58 |
+
gr.Number(label="SPM sliding_window_min", value=1),
|
59 |
+
gr.Number(label="SPM sliding_window_max", value=4),
|
60 |
+
gr.Number(label="SPM min_gap", value=1),
|
61 |
+
gr.Number(label="SPM max_gap", value=12),
|
62 |
+
gr.Number(label="SPM S_support_thresh", value=0.4),
|
63 |
+
gr.Number(label="SPM I_support_thresh", value=0),
|
64 |
+
gr.Number(label="SPM dataset_format", value=0),
|
65 |
+
gr.File(label="DSM Upload CSV file for left Dataset", value=None),
|
66 |
+
gr.File(label="DSM Upload CSV file for right Dataset", value=None),
|
67 |
+
gr.Textbox(label="DSM identifier_column", value="Identifier"),
|
68 |
+
gr.Textbox(label="DSM sequence_column", value="Sequence"),
|
69 |
+
gr.Dropdown(label="DSM sortby", choices=["S-Support", "I-Support"], value="S-Support"),
|
70 |
+
gr.Number(label="DSM sliding_window_min", value=1),
|
71 |
+
gr.Number(label="DSM sliding_window_max", value=1),
|
72 |
+
gr.Number(label="DSM min_gap", value=1),
|
73 |
+
gr.Number(label="DSM max_gap", value=12),
|
74 |
+
gr.Number(label="DSM S_support_thresh", value=0.4),
|
75 |
+
gr.Number(label="DSM I_support_thresh", value=0),
|
76 |
+
gr.Number(label="DSM threshold_pvalue", value=0.1),
|
77 |
+
gr.Number(label="DSM dataset_format", value=0),
|
78 |
+
gr.Dropdown(label="DSM test_type", choices=["poisson_means_test", "ttest_ind", "mannwhitneyu", "bws_test", "ranksums", "brunnermunzel", "mood", "ansari", "cramervonmises_2samp", "epps_singleton_2samp", "ks_2samp", "kstest"], value="ttest_ind"),
|
79 |
+
gr.Dropdown(label="Select method for which you want to view result", choices=["SPM", "DSM"], value="DSM")
|
80 |
],
|
81 |
outputs=[gr.File(label="SPM result"), gr.File(label="DSM result"), "dataframe"],
|
82 |
title="SPM And DSM Implementation in Python"
|