misantamaria commited on
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1c5c1a3
1 Parent(s): 7399708

entrypoint 2 docker folder

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  1. docker/entrypoint-rstudio.sh +25 -0
docker/entrypoint-rstudio.sh ADDED
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+ #!/bin/bash --login
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+ set -e
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+
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+ echo ". ${HOME}/miniconda3/etc/profile.d/conda.sh" >> ${HOME}/.bashrc
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+ # Make bash automatically activate the conda environment
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+ echo "conda activate ${ENV_PREFIX}" >> ~/.bashrc
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+ #echo "export WANDB_ENTITY=${WANDB_ENTITY:-default}" >> ${HOME}/.bashrc
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+ # echo "WANDB_ENTITY=${WANDB_ENTITY:-default}" >> ${HOME}/.Renviron
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+
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+ # Define an array of environment variable names from the ENV_VARS Compose variable
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+ IFS=',' read -ra ENV_VAR_NAMES <<< "$ENV_VARS"
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+
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+ echo "ENV_VAR_NAMES=${ENV_VAR_NAMES[@]}"
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+
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+ # Loop through the array of environment variable names and set the variables
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+ for ENV_VAR_NAME in "${ENV_VAR_NAMES[@]}"; do
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+ ENV_VAR_VALUE="${!ENV_VAR_NAME:-default}"
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+ echo "$ENV_VAR_NAME=$ENV_VAR_VALUE" >> ${HOME}/.Renviron
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+ done
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+
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+ ulimit -s 16384
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+
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+ # start rstudio server
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+ /init
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+ exec "$@"