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<li class="toctree-l1 current"><a class="current reference internal" href="#">Data</a><ul> |
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<div class="section" id="data"> |
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<h1>Data<a class="headerlink" href="#data" title="Permalink to this headline">¶</a></h1> |
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<div class="section" id="trained-models"> |
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<h2>Trained Models<a class="headerlink" href="#trained-models" title="Permalink to this headline">¶</a></h2> |
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<ul class="simple"> |
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<li><p><a class="reference external" href="http://cb.csail.mit.edu/cb/dscript/data/models/lm_v1.sav">Bepler & Berger language model</a></p></li> |
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<li><p><a class="reference external" href="http://cb.csail.mit.edu/cb/dscript/data/models/human_v1.sav">Human data trained model</a></p></li> |
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<div class="section" id="sample-data"> |
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<h2>Sample Data<a class="headerlink" href="#sample-data" title="Permalink to this headline">¶</a></h2> |
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<div class="section" id="sequences"> |
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<h3>Sequences<a class="headerlink" href="#sequences" title="Permalink to this headline">¶</a></h3> |
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<ul class="simple"> |
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<li><p><a class="reference external" href="https://github.com/samsledje/D-SCRIPT/blob/main/data/seqs/human.fasta">Human</a></p></li> |
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<li><p><a class="reference external" href="https://github.com/samsledje/D-SCRIPT/blob/main/data/seqs/mouse.fasta">Mouse</a></p></li> |
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<li><p><a class="reference external" href="https://github.com/samsledje/D-SCRIPT/blob/main/data/seqs/fly.fasta">Fly</a></p></li> |
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<li><p><a class="reference external" href="https://github.com/samsledje/D-SCRIPT/blob/main/data/seqs/yeast.fasta">Yeast</a></p></li> |
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<li><p><a class="reference external" href="https://github.com/samsledje/D-SCRIPT/blob/main/data/seqs/worm.fasta">Worm</a></p></li> |
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</ul> |
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<div class="section" id="interactions"> |
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<h3>Interactions<a class="headerlink" href="#interactions" title="Permalink to this headline">¶</a></h3> |
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<ul class="simple"> |
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<li><p><a class="reference external" href="https://github.com/samsledje/D-SCRIPT/blob/main/data/pairs/human_train.tsv">Human Train</a></p></li> |
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<li><p><a class="reference external" href="https://github.com/samsledje/D-SCRIPT/blob/main/data/pairs/human_test.tsv">Human Test</a></p></li> |
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<li><p><a class="reference external" href="https://github.com/samsledje/D-SCRIPT/blob/main/data/pairs/mouse_test.tsv">Mouse Test</a></p></li> |
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<li><p><a class="reference external" href="https://github.com/samsledje/D-SCRIPT/blob/main/data/pairs/fly_test.tsv">Fly Test</a></p></li> |
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<li><p><a class="reference external" href="https://github.com/samsledje/D-SCRIPT/blob/main/data/pairs/yeast_test.tsv">Yeast Test</a></p></li> |
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<li><p><a class="reference external" href="https://github.com/samsledje/D-SCRIPT/blob/main/data/pairs/worm_test.tsv">Worm Test</a></p></li> |
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