W&B logging add hyperparameters (#1399)

* W&B logging add hyperparameters

* hyp bug fix and image logging updates

* if plots and wandb:

* cleanup

* wandb/ gitignore add

* cleanup 2

* cleanup 3

* move wandb import to top of file

* wandb evolve

* update import

* wandb.run.finish()

* default anchors: 3

.gitignore

@@ -79,9 +79,11 @@ sdist/
 var/
 wheels/
 *.egg-info/
+wandb/
 .installed.cfg
 *.egg
 
+
 # PyInstaller
 #  Usually these files are written by a python script from a template
 #  before PyInstaller builds the exe, so as to inject date/other infos into it.

data/hyp.scratch.yaml

@@ -17,7 +17,7 @@ obj: 1.0  # obj loss gain (scale with pixels)
 obj_pw: 1.0  # obj BCELoss positive_weight
 iou_t: 0.20  # IoU training threshold
 anchor_t: 4.0  # anchor-multiple threshold
-# anchors: 0  # anchors per output grid (0 to ignore)
+# anchors: 3  # anchors per output layer (0 to ignore)
 fl_gamma: 0.0  # focal loss gamma (efficientDet default gamma=1.5)
 hsv_h: 0.015  # image HSV-Hue augmentation (fraction)
 hsv_s: 0.7  # image HSV-Saturation augmentation (fraction)

test.py

@@ -75,7 +75,7 @@ def test(data,
     niou = iouv.numel()
 
     # Logging
-    log_imgs = min(log_imgs, 100)  # ceil
+    log_imgs, wandb = min(log_imgs, 100), None  # ceil
     try:
         import wandb  # Weights & Biases
     except ImportError:
@@ -132,6 +132,7 @@ def test(data,
                 continue
 
             # Append to text file
+            path = Path(paths[si])
             if save_txt:
                 gn = torch.tensor(shapes[si][0])[[1, 0, 1, 0]]  # normalization gain whwh
                 x = pred.clone()
@@ -139,18 +140,18 @@ def test(data,
                 for *xyxy, conf, cls in x:
                     xywh = (xyxy2xywh(torch.tensor(xyxy).view(1, 4)) / gn).view(-1).tolist()  # normalized xywh
                     line = (cls, *xywh, conf) if save_conf else (cls, *xywh)  # label format
-                    with open(str(save_dir / 'labels' / Path(paths[si]).stem) + '.txt', 'a') as f:
+                    with open(save_dir / 'labels' / (path.stem + '.txt'), 'a') as f:
                         f.write(('%g ' * len(line)).rstrip() % line + '\n')
 
             # W&B logging
-            if len(wandb_images) < log_imgs:
+            if plots and len(wandb_images) < log_imgs:
                 box_data = [{"position": {"minX": xyxy[0], "minY": xyxy[1], "maxX": xyxy[2], "maxY": xyxy[3]},
                              "class_id": int(cls),
                              "box_caption": "%s %.3f" % (names[cls], conf),
                              "scores": {"class_score": conf},
-                             "domain": "pixel"} for *xyxy, conf, cls in pred.clone().tolist()]
+                             "domain": "pixel"} for *xyxy, conf, cls in pred.tolist()]
                 boxes = {"predictions": {"box_data": box_data, "class_labels": names}}
-                wandb_images.append(wandb.Image(img[si], boxes=boxes))
+                wandb_images.append(wandb.Image(img[si], boxes=boxes, caption=path.name))
 
             # Clip boxes to image bounds
             clip_coords(pred, (height, width))
@@ -158,13 +159,13 @@ def test(data,
             # Append to pycocotools JSON dictionary
             if save_json:
                 # [{"image_id": 42, "category_id": 18, "bbox": [258.15, 41.29, 348.26, 243.78], "score": 0.236}, ...
-                image_id = Path(paths[si]).stem
+                image_id = int(path.stem) if path.stem.isnumeric() else path.stem
                 box = pred[:, :4].clone()  # xyxy
                 scale_coords(img[si].shape[1:], box, shapes[si][0], shapes[si][1])  # to original shape
                 box = xyxy2xywh(box)  # xywh
                 box[:, :2] -= box[:, 2:] / 2  # xy center to top-left corner
                 for p, b in zip(pred.tolist(), box.tolist()):
-                    jdict.append({'image_id': int(image_id) if image_id.isnumeric() else image_id,
+                    jdict.append({'image_id': image_id,
                                   'category_id': coco91class[int(p[5])] if is_coco else int(p[5]),
                                   'bbox': [round(x, 3) for x in b],
                                   'score': round(p[4], 5)})
@@ -203,15 +204,11 @@ def test(data,
             stats.append((correct.cpu(), pred[:, 4].cpu(), pred[:, 5].cpu(), tcls))
 
         # Plot images
-        if plots and batch_i < 1:
+        if plots and batch_i < 3:
             f = save_dir / f'test_batch{batch_i}_labels.jpg'  # filename
-            plot_images(img, targets, paths, str(f), names)  # labels
+            plot_images(img, targets, paths, f, names)  # labels
             f = save_dir / f'test_batch{batch_i}_pred.jpg'
-            plot_images(img, output_to_target(output, width, height), paths, str(f), names)  # predictions
-
-    # W&B logging
-    if wandb_images:
-        wandb.log({"outputs": wandb_images})
+            plot_images(img, output_to_target(output, width, height), paths, f, names)  # predictions
 
     # Compute statistics
     stats = [np.concatenate(x, 0) for x in zip(*stats)]  # to numpy
@@ -223,6 +220,11 @@ def test(data,
     else:
         nt = torch.zeros(1)
 
+    # W&B logging
+    if plots and wandb:
+        wandb.log({"Images": wandb_images})
+        wandb.log({"Validation": [wandb.Image(str(x), caption=x.name) for x in sorted(save_dir.glob('test*.jpg'))]})
+
     # Print results
     pf = '%20s' + '%12.3g' * 6  # print format
     print(pf % ('all', seen, nt.sum(), mp, mr, map50, map))

train.py

@@ -34,6 +34,12 @@ from utils.torch_utils import ModelEMA, select_device, intersect_dicts, torch_di
 
 logger = logging.getLogger(__name__)
 
+try:
+    import wandb
+except ImportError:
+    wandb = None
+    logger.info("Install Weights & Biases for experiment logging via 'pip install wandb' (recommended)")
+
 
 def train(hyp, opt, device, tb_writer=None, wandb=None):
     logger.info(f'Hyperparameters {hyp}')
@@ -54,6 +60,7 @@ def train(hyp, opt, device, tb_writer=None, wandb=None):
         yaml.dump(vars(opt), f, sort_keys=False)
 
     # Configure
+    plots = not opt.evolve  # create plots
     cuda = device.type != 'cpu'
     init_seeds(2 + rank)
     with open(opt.data) as f:
@@ -122,6 +129,7 @@ def train(hyp, opt, device, tb_writer=None, wandb=None):
 
     # Logging
     if wandb and wandb.run is None:
+        opt.hyp = hyp  # add hyperparameters
         wandb_run = wandb.init(config=opt, resume="allow",
                                project='YOLOv5' if opt.project == 'runs/train' else Path(opt.project).stem,
                                name=save_dir.stem,
@@ -164,7 +172,7 @@ def train(hyp, opt, device, tb_writer=None, wandb=None):
         model = torch.nn.SyncBatchNorm.convert_sync_batchnorm(model).to(device)
         logger.info('Using SyncBatchNorm()')
 
-    # Exponential moving average
+    # EMA
     ema = ModelEMA(model) if rank in [-1, 0] else None
 
     # DDP mode
@@ -191,10 +199,12 @@ def train(hyp, opt, device, tb_writer=None, wandb=None):
             c = torch.tensor(labels[:, 0])  # classes
             # cf = torch.bincount(c.long(), minlength=nc) + 1.  # frequency
             # model._initialize_biases(cf.to(device))
-            plot_labels(labels, save_dir=save_dir)
-            if tb_writer:
-                # tb_writer.add_hparams(hyp, {})  # causes duplicate https://github.com/ultralytics/yolov5/pull/384
-                tb_writer.add_histogram('classes', c, 0)
+            if plots:
+                plot_labels(labels, save_dir=save_dir)
+                if tb_writer:
+                    tb_writer.add_histogram('classes', c, 0)
+                if wandb:
+                    wandb.log({"Labels": [wandb.Image(str(x), caption=x.name) for x in save_dir.glob('*labels*.png')]})
 
             # Anchors
             if not opt.noautoanchor:
@@ -298,14 +308,17 @@ def train(hyp, opt, device, tb_writer=None, wandb=None):
                 pbar.set_description(s)
 
                 # Plot
-                if ni < 3:
-                    f = str(save_dir / f'train_batch{ni}.jpg')  # filename
-                    result = plot_images(images=imgs, targets=targets, paths=paths, fname=f)
-                    # if tb_writer and result is not None:
-                    # tb_writer.add_image(f, result, dataformats='HWC', global_step=epoch)
-                    # tb_writer.add_graph(model, imgs)  # add model to tensorboard
+                if plots and ni < 3:
+                    f = save_dir / f'train_batch{ni}.jpg'  # filename
+                    plot_images(images=imgs, targets=targets, paths=paths, fname=f)
+                    # if tb_writer:
+                    #     tb_writer.add_image(f, result, dataformats='HWC', global_step=epoch)
+                    #     tb_writer.add_graph(model, imgs)  # add model to tensorboard
+                elif plots and ni == 3 and wandb:
+                    wandb.log({"Mosaics": [wandb.Image(str(x), caption=x.name) for x in save_dir.glob('train*.jpg')]})
 
             # end batch ------------------------------------------------------------------------------------------------
+        # end epoch ----------------------------------------------------------------------------------------------------
 
         # Scheduler
         lr = [x['lr'] for x in optimizer.param_groups]  # for tensorboard
@@ -325,7 +338,7 @@ def train(hyp, opt, device, tb_writer=None, wandb=None):
                                                  single_cls=opt.single_cls,
                                                  dataloader=testloader,
                                                  save_dir=save_dir,
-                                                 plots=epoch == 0 or final_epoch,  # plot first and last
+                                                 plots=plots and final_epoch,
                                                  log_imgs=opt.log_imgs if wandb else 0)
 
             # Write
@@ -380,11 +393,16 @@ def train(hyp, opt, device, tb_writer=None, wandb=None):
                     strip_optimizer(f2)  # strip optimizer
                     os.system('gsutil cp %s gs://%s/weights' % (f2, opt.bucket)) if opt.bucket else None  # upload
         # Finish
-        if not opt.evolve:
+        if plots:
             plot_results(save_dir=save_dir)  # save as results.png
+            if wandb:
+                wandb.log({"Results": [wandb.Image(str(save_dir / x), caption=x) for x in
+                                       ['results.png', 'precision-recall_curve.png']]})
         logger.info('%g epochs completed in %.3f hours.\n' % (epoch - start_epoch + 1, (time.time() - t0) / 3600))
+    else:
+        dist.destroy_process_group()
 
-    dist.destroy_process_group() if rank not in [-1, 0] else None
+    wandb.run.finish() if wandb and wandb.run else None
     torch.cuda.empty_cache()
     return results
 
@@ -413,7 +431,7 @@ if __name__ == '__main__':
     parser.add_argument('--adam', action='store_true', help='use torch.optim.Adam() optimizer')
     parser.add_argument('--sync-bn', action='store_true', help='use SyncBatchNorm, only available in DDP mode')
     parser.add_argument('--local_rank', type=int, default=-1, help='DDP parameter, do not modify')
-    parser.add_argument('--log-imgs', type=int, default=10, help='number of images for W&B logging, max 100')
+    parser.add_argument('--log-imgs', type=int, default=16, help='number of images for W&B logging, max 100')
     parser.add_argument('--workers', type=int, default=8, help='maximum number of dataloader workers')
     parser.add_argument('--project', default='runs/train', help='save to project/name')
     parser.add_argument('--name', default='exp', help='save to project/name')
@@ -442,7 +460,7 @@ if __name__ == '__main__':
         assert len(opt.cfg) or len(opt.weights), 'either --cfg or --weights must be specified'
         opt.img_size.extend([opt.img_size[-1]] * (2 - len(opt.img_size)))  # extend to 2 sizes (train, test)
         opt.name = 'evolve' if opt.evolve else opt.name
-        opt.save_dir = increment_path(Path(opt.project) / opt.name, exist_ok=opt.exist_ok)  # increment run
+        opt.save_dir = increment_path(Path(opt.project) / opt.name, exist_ok=opt.exist_ok | opt.evolve)  # increment run
 
     # DDP mode
     device = select_device(opt.device, batch_size=opt.batch_size)
@@ -465,20 +483,10 @@ if __name__ == '__main__':
     # Train
     logger.info(opt)
     if not opt.evolve:
-        tb_writer, wandb = None, None  # init loggers
+        tb_writer = None  # init loggers
         if opt.global_rank in [-1, 0]:
-            # Tensorboard
             logger.info(f'Start Tensorboard with "tensorboard --logdir {opt.project}", view at http://localhost:6006/')
-            tb_writer = SummaryWriter(opt.save_dir)  # runs/train/exp
-
-            # W&B
-            try:
-                import wandb
-
-                assert os.environ.get('WANDB_DISABLED') != 'true'
-            except (ImportError, AssertionError):
-                logger.info("Install Weights & Biases for experiment logging via 'pip install wandb' (recommended)")
-
+            tb_writer = SummaryWriter(opt.save_dir)  # Tensorboard
         train(hyp, opt, device, tb_writer, wandb)
 
     # Evolve hyperparameters (optional)
@@ -553,7 +561,7 @@ if __name__ == '__main__':
                 hyp[k] = round(hyp[k], 5)  # significant digits
 
             # Train mutation
-            results = train(hyp.copy(), opt, device)
+            results = train(hyp.copy(), opt, device, wandb=wandb)
 
             # Write mutation results
             print_mutation(hyp.copy(), results, yaml_file, opt.bucket)

utils/plots.py

@@ -158,13 +158,13 @@ def plot_images(images, targets, paths=None, fname='images.jpg', names=None, max
                 cls = int(classes[j])
                 color = colors[cls % len(colors)]
                 cls = names[cls] if names else cls
-                if labels or conf[j] > 0.3:  # 0.3 conf thresh
+                if labels or conf[j] > 0.25:  # 0.25 conf thresh
                     label = '%s' % cls if labels else '%s %.1f' % (cls, conf[j])
                     plot_one_box(box, mosaic, label=label, color=color, line_thickness=tl)
 
         # Draw image filename labels
-        if paths is not None:
-            label = os.path.basename(paths[i])[:40]  # trim to 40 char
+        if paths:
+            label = Path(paths[i]).name[:40]  # trim to 40 char
             t_size = cv2.getTextSize(label, 0, fontScale=tl / 3, thickness=tf)[0]
             cv2.putText(mosaic, label, (block_x + 5, block_y + t_size[1] + 5), 0, tl / 3, [220, 220, 220], thickness=tf,
                         lineType=cv2.LINE_AA)
@@ -172,7 +172,7 @@ def plot_images(images, targets, paths=None, fname='images.jpg', names=None, max
         # Image border
         cv2.rectangle(mosaic, (block_x, block_y), (block_x + w, block_y + h), (255, 255, 255), thickness=3)
 
-    if fname is not None:
+    if fname:
         r = min(1280. / max(h, w) / ns, 1.0)  # ratio to limit image size
         mosaic = cv2.resize(mosaic, (int(ns * w * r), int(ns * h * r)), interpolation=cv2.INTER_AREA)
         # cv2.imwrite(fname, cv2.cvtColor(mosaic, cv2.COLOR_BGR2RGB))  # cv2 save