################################################################################### # ALEX'S UTILITIES # # alternatively # url = "https://alx.gd/util" # with httpimport.remote_repo(url): # import util # # poetry add pandas tabulate rich import json import os import shlex import struct import platform import subprocess import tabulate from IPython.display import clear_output import rich import datetime import time import random import string import pandas as pd import logging import importlib from uuid import uuid4 from IPython import embed import numpy as np from pathlib import Path import inspect import sys from rich import console console = console.Console() def find_root_from_readme(): # Attempt to find README.md in the current directory and up two levels max_levels_up = 2 current_dir = os.path.abspath(os.curdir) for _ in range(max_levels_up + 1): # Construct the path to where README.md might be readme_path = os.path.join(current_dir, "README.md") # Check if README.md exists at this path if os.path.isfile(readme_path): # Return the absolute path if found return os.path.dirname(os.path.abspath(readme_path)) # Move up one directory level current_dir = os.path.dirname(current_dir) # Return None if README.md was not found return None ROOT_DIR = find_root_from_readme() PAPER_DIR = os.path.join(ROOT_DIR, 'manuscript') FIG_DIR = os.path.join(PAPER_DIR, 'figures') AUDIO_DIR = os.path.join(ROOT_DIR, 'audio_files') pd.set_option('display.max_colwidth', 70) def configure_logging(): filename = f"{ROOT_DIR}/logs/log.txt" if not os.path.exists(filename): os.makedirs(os.path.dirname(filename), exist_ok=True) logging.basicConfig(filename=filename, filemode='w', format='%(asctime)s,%(msecs)d %(name)s %(levelname)s %(message)s', datefmt='%Y-%m-%d %H:%M', level=logging.DEBUG) return filename def get_root_dir(): # assumes in the root/utilities folder return os.path.dirname(os.path.abspath("../README.md")) def get_fig_dir(): return get_root_dir() + "/manuscript/figures" def reload(): importlib.reload(util) def generate_hash(): return str(uuid4()) def generate_random_string(): return ''.join(random.choice(string.ascii_lowercase) for _ in range(2)) + ''.join( random.choice(string.digits) for _ in range(2)) + ''.join( random.choice(string.ascii_lowercase) for _ in range(2)) + ''.join( random.choice(string.digits) for _ in range(2)) + ''.join( random.choice(string.ascii_lowercase) for _ in range(2)) def wait_rand(): wait_time = random.randint(1, 3) time.sleep(wait_time) def log_and_print(text): logging.info(text) print(text) def log(text): logging.info(text) def get_timestamp(): timestamp = '{:%Y-%m-%d-T-%H-%M-%S}'.format(datetime.datetime.now()) return timestamp def printl(text): print(text, end="") def cprint(text): clear_output(wait=True) print(text, flush=True) def log_and_rich_print(text): logging.info(text) rich.print(text, flush=True) def rprint(text): rich.print(text, flush=True) def lp(text): log_and_rich_print(text) def start_log_task(text): rich.print(f"[yellow] ◕ {text} [/yellow]", flush=True, end="...") logging.info(text) def log_task(text): rich.print(f"[yellow] ⦿ {text} [/yellow]", flush=True) logging.info(text) def end_log_task(): rich.print(f"[yellow bold] Done [/yellow bold]", flush=True) logging.info("Done") def log_mini_task(text, text2=None): if text2: text = text + "..." + str(text2) console.log(f" ─── {text} ", style="italic") logging.info(text) def clear(): os.system('cls' if os.name == 'nt' else 'clear') def tab_cols(df, cns): for cn in cns: print("\n\n{}".format(titlecase(cn))) print(tabulate.tabulate(pd.DataFrame(df[cn].value_counts()), tablefmt="pipe", headers=['Name', 'Count'])) def tab(df, tbformat="heavy_grid"): print(tabulate.tabulate(df, headers='keys', tablefmt=tbformat, showindex=False)) def header(m): length = get_terminal_size()[0] print(colored(m, 'yellow')) print(colored('▒' * length, 'white')) def alert(m, error_code): text_color = ['green', 'yellow', 'red', 'white'][error_code] length = get_terminal_size()[0] print(colored('\n > ' + m, text_color)) def hr(): length = get_terminal_size()[0] print(colored('-' * length, 'white')) def logo(): logo = ''' ▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁ ▏ ▕ ▏ ▕ ▏ ▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓░░░░░░░░░░░░░░░░░░░░░░ ▕ ▏ ▓▓▓▓ ▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓░░░░░░░░░░░░░░░░░░░ ▕ ▏ ▓▓▓▓ [bold]SYNTHETIC[/bold] ▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓░░░░░░░░░░░░░░ ▕ ▏ ▓▓▓▓ [yellow bold]PATIENT[/yellow bold] ▓▓▓▓▓▓▓▓▓▓▓▓▓▓▒▒▒▒▒▓▓▒▒▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓░░░░░░░░░░ ▕ ▏ ▓▓▓▓ [yellow]PROJECT[/yellow] ▓▓▓▓▓▓▓▓▒░▒▒░░▒▒▒░▒▒▒░▒▒▒▒▒▒▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓░░░░░ ▕ ▏ ▓▓▓▓ ▓▓▓▓▓▒░▒░░░░░░░░░░░░░░░░░▒▒▒▒▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓░░░ ▕ ▏ ▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▒▒░▒▒░░░░░░░▒▒▒▒▒▒▒▒▒░░░▒▒░░▒▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓░░ ▕ ▏ ▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▒░▒▒░ ░░░░▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░▒▒▒▒▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓ ▕ ▏ ▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▒░▒▒░ ░░░▒▒▒▓▓▒▓███▓▓▒▒▒░░▒▒▒▒▒▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓ ▕ ▏ ▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓░▒▒▒░ 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▓▓▓▓▓▓▓▓▒ ░▒░░▒▒▒▒░░▒▒▒░▒░ ▒▓▓▓▓▓▓▓▓ ▕ ▏ ▓▓▓▓▓▓▓ ░▒█▒▒▒░░ ▒▒▒ ▒▓▓▓▓▓▓ ▕ ▏ ▓▓▓▓▓▒ ░░ ▒▓▓▓▒░ ░░▓ ░ ▒▓▓▓▓▓ ▕ ▏ ▓▓▓▓▒ ░ ░ ░ ▒▓▓▓▓ ▕ ▏ ▓▓▓▓ ▒▒▒░░▓▒▒▒▒░░▒▒▓▒▒░░ ░▒░▓▒ ░░▒▒▒▒▒▒▒▒▓▓▒▒▒░▒▓▒░ ▓▓▓▓ ▕ ▏ ▓▓▓░ ▒▒▒▒▒ ▒▓░ ░▓▒▒▒ ░▓▓▓ ▕ ▏ ▓▓▓▒▓▒░░ ░▒░ ░▒░ ▒░░░▒▓▓▓ ▕ ▏ ▓▓░ ░░▒▒░ ░░░ ▒▓▓ ▕ ▏ ▓▒ ▒▓ ▕ ▏ ▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔ ▕ ▏ ▕ ▏ [italic white]Ahmed Al-Farsi, Synthetic Patient #1[/italic white] ▕ ▏ ▕ ▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔▔ [blue]© [bold]GRANOLA AI[/bold][/blue] ''' rich.print(logo) def initialize(): logging_file_path = configure_logging() clear() logo() start_log_task("Loading utilities") end_log_task() log_mini_task("Logging configured at: " + logging_file_path) log_mini_task("Utilities loaded") if __name__ == "__main__": print("hello world")