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README.md
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We share here also code used to benchmark PINNACLE on the TDC.scDTI task.
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https://colab.research.google.com/drive/14WeNbDNyDi_45hFayBMtt2MBOvhyRRvy?usp=sharing
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## References
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* Dataset entry in Therapeutics Data Commons, https://tdcommons.ai/multi_pred_tasks/scdti/
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* Li, Michelle, et al. “Contextual AI models for single-cell protein biology” Nature Methods (2024)
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We share here also code used to benchmark PINNACLE on the TDC.scDTI task.
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https://colab.research.google.com/drive/14WeNbDNyDi_45hFayBMtt2MBOvhyRRvy?usp=sharing
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## TDC Citation
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```
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@inproceedings{
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velez-arce2024signals,
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title={Signals in the Cells: Multimodal and Contextualized Machine Learning Foundations for Therapeutics},
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author={Alejandro Velez-Arce and Kexin Huang and Michelle M Li and Xiang Lin and Wenhao Gao and Bradley Pentelute and Tianfan Fu and Manolis Kellis and Marinka Zitnik},
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booktitle={NeurIPS 2024 Workshop on AI for New Drug Modalities},
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year={2024},
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url={https://openreview.net/forum?id=kL8dlYp6IM}
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}
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```
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## References
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* Dataset entry in Therapeutics Data Commons, https://tdcommons.ai/multi_pred_tasks/scdti/
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* Li, Michelle, et al. “Contextual AI models for single-cell protein biology” Nature Methods (2024)
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