Fix download location for Raoultella_electrica

#6
InstaDeep Ltd org
edited Feb 14

As pointed out by vsubasri.

you get the following error when downloading the dataset

FileNotFoundError: Couldn't find file at https://ftp.ncbi.nlm.nih.gov/genomes/refseq/bacteria/Raoultella_electrica/latest_assembly_versions/GCF_006711645.1_ASM671164v1/GCF_006711645.1_ASM671164v1_genomic.fna.gz

According to the file cataloging the updates done in the new RefSeq release :

The following are organism name updates (current_tax_id|current_name|previous_tax_id|previous_name):
[...]
1259973|Klebsiella electrica|1259973|Raoultella electrica
[...]

So the file can now be found at

https://ftp.ncbi.nlm.nih.gov/genomes/refseq/bacteria/Klebsiella_electrica/latest_assembly_versions/GCF_006711645.1_ASM671164v1/GCF_006711645.1_ASM671164v1_genomic.fna.gz

This PR fixes the download URL.

BioGeek changed pull request title from Raoultella_electrica to Fix download location for Raoultella_electrica
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