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https://github.com/huggingface/datasets/issues/5513 | Some functions use a param named `type` shouldn't that be avoided since it's a Python reserved name? | Hi @mariosasko, ok it makes sense. Anyway, don't you think it's worth it at some point to start a deprecation cycle e.g. `fs` in `load_from_disk`? It doesn't affect user experience but it's for sure a bad practice IMO, but's up to you 😄 Feel free to close this issue otherwise! | Hi @mariosasko, @lhoestq, or whoever reads this! :)
After going through `ArrowDataset.set_format` I found out that the `type` param is actually named `type` which is a Python reserved name as you may already know, shouldn't that be renamed to `format_type` before the 3.0.0 is released?
Just wanted to get your input, and if applicable, tackle this issue myself! Thanks 🤗 | 304 | 50 | Some functions use a param named `type` shouldn't that be avoided since it's a Python reserved name?
Hi @mariosasko, @lhoestq, or whoever reads this! :)
After going through `ArrowDataset.set_format` I found out that the `type` param is actually named `type` which is a Python reserved name as you may already know, shouldn't that be renamed to `format_type` before the 3.0.0 is released?
Just wanted to get your input, and if applicable, tackle this issue myself! Thanks 🤗
Hi @mariosasko, ok it makes sense. Anyway, don't you think it's worth it at some point to start a deprecation cycle e.g. `fs` in `load_from_disk`? It doesn't affect user experience but it's for sure a bad practice IMO, but's up to you 😄 Feel free to close this issue otherwise! | [
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https://github.com/huggingface/datasets/issues/5513 | Some functions use a param named `type` shouldn't that be avoided since it's a Python reserved name? | I don't think deprecating a param name in this particular instance is worth the hassle, so I'm closing the issue 🙂. | Hi @mariosasko, @lhoestq, or whoever reads this! :)
After going through `ArrowDataset.set_format` I found out that the `type` param is actually named `type` which is a Python reserved name as you may already know, shouldn't that be renamed to `format_type` before the 3.0.0 is released?
Just wanted to get your input, and if applicable, tackle this issue myself! Thanks 🤗 | 304 | 21 | Some functions use a param named `type` shouldn't that be avoided since it's a Python reserved name?
Hi @mariosasko, @lhoestq, or whoever reads this! :)
After going through `ArrowDataset.set_format` I found out that the `type` param is actually named `type` which is a Python reserved name as you may already know, shouldn't that be renamed to `format_type` before the 3.0.0 is released?
Just wanted to get your input, and if applicable, tackle this issue myself! Thanks 🤗
I don't think deprecating a param name in this particular instance is worth the hassle, so I'm closing the issue 🙂. | [
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https://github.com/huggingface/datasets/issues/5511 | Creating a dummy dataset from a bigger one | Update `datasets` or downgrade `huggingface-hub` ;)
The `huggingface-hub` lib did a breaking change a few months ago, and you're using an old version of `datasets` that does't support it | ### Describe the bug
I often want to create a dummy dataset from a bigger dataset for fast iteration when training. However, I'm having a hard time doing this especially when trying to upload the dataset to the Hub.
### Steps to reproduce the bug
```python
from datasets import load_dataset
dataset = load_dataset("lambdalabs/pokemon-blip-captions")
dataset["train"] = dataset["train"].select(range(20))
dataset.push_to_hub("patrickvonplaten/dummy_image_data")
```
gives:
```
~/python_bin/datasets/arrow_dataset.py in _push_parquet_shards_to_hub(self, repo_id, split, private, token, branch, max_shard_size, embed_external_files)
4003 base_wait_time=2.0,
4004 max_retries=5,
-> 4005 max_wait_time=20.0,
4006 )
4007 return repo_id, split, uploaded_size, dataset_nbytes
~/python_bin/datasets/utils/file_utils.py in _retry(func, func_args, func_kwargs, exceptions, status_codes, max_retries, base_wait_time, max_wait_time)
328 while True:
329 try:
--> 330 return func(*func_args, **func_kwargs)
331 except exceptions as err:
332 if retry >= max_retries or (status_codes and err.response.status_code not in status_codes):
~/hf/lib/python3.7/site-packages/huggingface_hub/utils/_validators.py in _inner_fn(*args, **kwargs)
122 )
123
--> 124 return fn(*args, **kwargs)
125
126 return _inner_fn # type: ignore
TypeError: upload_file() got an unexpected keyword argument 'identical_ok'
In [2]:
```
### Expected behavior
I would have expected this to work. It's for me the most intuitive way of creating a dummy dataset.
### Environment info
```
- `datasets` version: 2.1.1.dev0
- Platform: Linux-4.19.0-22-cloud-amd64-x86_64-with-debian-10.13
- Python version: 3.7.3
- PyArrow version: 11.0.0
- Pandas version: 1.3.5
``` | 305 | 29 | Creating a dummy dataset from a bigger one
### Describe the bug
I often want to create a dummy dataset from a bigger dataset for fast iteration when training. However, I'm having a hard time doing this especially when trying to upload the dataset to the Hub.
### Steps to reproduce the bug
```python
from datasets import load_dataset
dataset = load_dataset("lambdalabs/pokemon-blip-captions")
dataset["train"] = dataset["train"].select(range(20))
dataset.push_to_hub("patrickvonplaten/dummy_image_data")
```
gives:
```
~/python_bin/datasets/arrow_dataset.py in _push_parquet_shards_to_hub(self, repo_id, split, private, token, branch, max_shard_size, embed_external_files)
4003 base_wait_time=2.0,
4004 max_retries=5,
-> 4005 max_wait_time=20.0,
4006 )
4007 return repo_id, split, uploaded_size, dataset_nbytes
~/python_bin/datasets/utils/file_utils.py in _retry(func, func_args, func_kwargs, exceptions, status_codes, max_retries, base_wait_time, max_wait_time)
328 while True:
329 try:
--> 330 return func(*func_args, **func_kwargs)
331 except exceptions as err:
332 if retry >= max_retries or (status_codes and err.response.status_code not in status_codes):
~/hf/lib/python3.7/site-packages/huggingface_hub/utils/_validators.py in _inner_fn(*args, **kwargs)
122 )
123
--> 124 return fn(*args, **kwargs)
125
126 return _inner_fn # type: ignore
TypeError: upload_file() got an unexpected keyword argument 'identical_ok'
In [2]:
```
### Expected behavior
I would have expected this to work. It's for me the most intuitive way of creating a dummy dataset.
### Environment info
```
- `datasets` version: 2.1.1.dev0
- Platform: Linux-4.19.0-22-cloud-amd64-x86_64-with-debian-10.13
- Python version: 3.7.3
- PyArrow version: 11.0.0
- Pandas version: 1.3.5
```
Update `datasets` or downgrade `huggingface-hub` ;)
The `huggingface-hub` lib did a breaking change a few months ago, and you're using an old version of `datasets` that does't support it | [
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https://github.com/huggingface/datasets/issues/5511 | Creating a dummy dataset from a bigger one | Getting same error with latest versions.
```shell
---------------------------------------------------------------------------
TypeError Traceback (most recent call last)
Cell In[99], line 1
----> 1 dataset.push_to_hub("mirfan899/kids_phoneme_asr")
File /opt/conda/lib/python3.10/site-packages/datasets/arrow_dataset.py:3538, in Dataset.push_to_hub(self, repo_id, split, private, token, branch, shard_size, embed_external_files)
3493 def push_to_hub(
3494 self,
3495 repo_id: str,
(...)
3501 embed_external_files: bool = True,
3502 ):
3503 """Pushes the dataset to the hub.
3504 The dataset is pushed using HTTP requests and does not need to have neither git or git-lfs installed.
3505
(...)
3536 ```
3537 """
-> 3538 repo_id, split, uploaded_size, dataset_nbytes = self._push_parquet_shards_to_hub(
3539 repo_id=repo_id,
3540 split=split,
3541 private=private,
3542 token=token,
3543 branch=branch,
3544 shard_size=shard_size,
3545 embed_external_files=embed_external_files,
3546 )
3547 organization, dataset_name = repo_id.split("/")
3548 info_to_dump = self.info.copy()
File /opt/conda/lib/python3.10/site-packages/datasets/arrow_dataset.py:3474, in Dataset._push_parquet_shards_to_hub(self, repo_id, split, private, token, branch, shard_size, embed_external_files)
3472 shard.to_parquet(buffer)
3473 uploaded_size += buffer.tell()
-> 3474 _retry(
3475 api.upload_file,
3476 func_kwargs=dict(
3477 path_or_fileobj=buffer.getvalue(),
3478 path_in_repo=path_in_repo(index),
3479 repo_id=repo_id,
3480 token=token,
3481 repo_type="dataset",
3482 revision=branch,
3483 identical_ok=True,
3484 ),
3485 exceptions=HTTPError,
3486 status_codes=[504],
3487 base_wait_time=2.0,
3488 max_retries=5,
3489 max_wait_time=20.0,
3490 )
3491 return repo_id, split, uploaded_size, dataset_nbytes
File /opt/conda/lib/python3.10/site-packages/datasets/utils/file_utils.py:330, in _retry(func, func_args, func_kwargs, exceptions, status_codes, max_retries, base_wait_time, max_wait_time)
328 while True:
329 try:
--> 330 return func(*func_args, **func_kwargs)
331 except exceptions as err:
332 if retry >= max_retries or (status_codes and err.response.status_code not in status_codes):
File /opt/conda/lib/python3.10/site-packages/huggingface_hub/utils/_validators.py:120, in validate_hf_hub_args.<locals>._inner_fn(*args, **kwargs)
117 if check_use_auth_token:
118 kwargs = smoothly_deprecate_use_auth_token(fn_name=fn.__name__, has_token=has_token, kwargs=kwargs)
--> 120 return fn(*args, **kwargs)
TypeError: HfApi.upload_file() got an unexpected keyword argument 'identical_ok'
``` | ### Describe the bug
I often want to create a dummy dataset from a bigger dataset for fast iteration when training. However, I'm having a hard time doing this especially when trying to upload the dataset to the Hub.
### Steps to reproduce the bug
```python
from datasets import load_dataset
dataset = load_dataset("lambdalabs/pokemon-blip-captions")
dataset["train"] = dataset["train"].select(range(20))
dataset.push_to_hub("patrickvonplaten/dummy_image_data")
```
gives:
```
~/python_bin/datasets/arrow_dataset.py in _push_parquet_shards_to_hub(self, repo_id, split, private, token, branch, max_shard_size, embed_external_files)
4003 base_wait_time=2.0,
4004 max_retries=5,
-> 4005 max_wait_time=20.0,
4006 )
4007 return repo_id, split, uploaded_size, dataset_nbytes
~/python_bin/datasets/utils/file_utils.py in _retry(func, func_args, func_kwargs, exceptions, status_codes, max_retries, base_wait_time, max_wait_time)
328 while True:
329 try:
--> 330 return func(*func_args, **func_kwargs)
331 except exceptions as err:
332 if retry >= max_retries or (status_codes and err.response.status_code not in status_codes):
~/hf/lib/python3.7/site-packages/huggingface_hub/utils/_validators.py in _inner_fn(*args, **kwargs)
122 )
123
--> 124 return fn(*args, **kwargs)
125
126 return _inner_fn # type: ignore
TypeError: upload_file() got an unexpected keyword argument 'identical_ok'
In [2]:
```
### Expected behavior
I would have expected this to work. It's for me the most intuitive way of creating a dummy dataset.
### Environment info
```
- `datasets` version: 2.1.1.dev0
- Platform: Linux-4.19.0-22-cloud-amd64-x86_64-with-debian-10.13
- Python version: 3.7.3
- PyArrow version: 11.0.0
- Pandas version: 1.3.5
``` | 305 | 237 | Creating a dummy dataset from a bigger one
### Describe the bug
I often want to create a dummy dataset from a bigger dataset for fast iteration when training. However, I'm having a hard time doing this especially when trying to upload the dataset to the Hub.
### Steps to reproduce the bug
```python
from datasets import load_dataset
dataset = load_dataset("lambdalabs/pokemon-blip-captions")
dataset["train"] = dataset["train"].select(range(20))
dataset.push_to_hub("patrickvonplaten/dummy_image_data")
```
gives:
```
~/python_bin/datasets/arrow_dataset.py in _push_parquet_shards_to_hub(self, repo_id, split, private, token, branch, max_shard_size, embed_external_files)
4003 base_wait_time=2.0,
4004 max_retries=5,
-> 4005 max_wait_time=20.0,
4006 )
4007 return repo_id, split, uploaded_size, dataset_nbytes
~/python_bin/datasets/utils/file_utils.py in _retry(func, func_args, func_kwargs, exceptions, status_codes, max_retries, base_wait_time, max_wait_time)
328 while True:
329 try:
--> 330 return func(*func_args, **func_kwargs)
331 except exceptions as err:
332 if retry >= max_retries or (status_codes and err.response.status_code not in status_codes):
~/hf/lib/python3.7/site-packages/huggingface_hub/utils/_validators.py in _inner_fn(*args, **kwargs)
122 )
123
--> 124 return fn(*args, **kwargs)
125
126 return _inner_fn # type: ignore
TypeError: upload_file() got an unexpected keyword argument 'identical_ok'
In [2]:
```
### Expected behavior
I would have expected this to work. It's for me the most intuitive way of creating a dummy dataset.
### Environment info
```
- `datasets` version: 2.1.1.dev0
- Platform: Linux-4.19.0-22-cloud-amd64-x86_64-with-debian-10.13
- Python version: 3.7.3
- PyArrow version: 11.0.0
- Pandas version: 1.3.5
```
Getting same error with latest versions.
```shell
---------------------------------------------------------------------------
TypeError Traceback (most recent call last)
Cell In[99], line 1
----> 1 dataset.push_to_hub("mirfan899/kids_phoneme_asr")
File /opt/conda/lib/python3.10/site-packages/datasets/arrow_dataset.py:3538, in Dataset.push_to_hub(self, repo_id, split, private, token, branch, shard_size, embed_external_files)
3493 def push_to_hub(
3494 self,
3495 repo_id: str,
(...)
3501 embed_external_files: bool = True,
3502 ):
3503 """Pushes the dataset to the hub.
3504 The dataset is pushed using HTTP requests and does not need to have neither git or git-lfs installed.
3505
(...)
3536 ```
3537 """
-> 3538 repo_id, split, uploaded_size, dataset_nbytes = self._push_parquet_shards_to_hub(
3539 repo_id=repo_id,
3540 split=split,
3541 private=private,
3542 token=token,
3543 branch=branch,
3544 shard_size=shard_size,
3545 embed_external_files=embed_external_files,
3546 )
3547 organization, dataset_name = repo_id.split("/")
3548 info_to_dump = self.info.copy()
File /opt/conda/lib/python3.10/site-packages/datasets/arrow_dataset.py:3474, in Dataset._push_parquet_shards_to_hub(self, repo_id, split, private, token, branch, shard_size, embed_external_files)
3472 shard.to_parquet(buffer)
3473 uploaded_size += buffer.tell()
-> 3474 _retry(
3475 api.upload_file,
3476 func_kwargs=dict(
3477 path_or_fileobj=buffer.getvalue(),
3478 path_in_repo=path_in_repo(index),
3479 repo_id=repo_id,
3480 token=token,
3481 repo_type="dataset",
3482 revision=branch,
3483 identical_ok=True,
3484 ),
3485 exceptions=HTTPError,
3486 status_codes=[504],
3487 base_wait_time=2.0,
3488 max_retries=5,
3489 max_wait_time=20.0,
3490 )
3491 return repo_id, split, uploaded_size, dataset_nbytes
File /opt/conda/lib/python3.10/site-packages/datasets/utils/file_utils.py:330, in _retry(func, func_args, func_kwargs, exceptions, status_codes, max_retries, base_wait_time, max_wait_time)
328 while True:
329 try:
--> 330 return func(*func_args, **func_kwargs)
331 except exceptions as err:
332 if retry >= max_retries or (status_codes and err.response.status_code not in status_codes):
File /opt/conda/lib/python3.10/site-packages/huggingface_hub/utils/_validators.py:120, in validate_hf_hub_args.<locals>._inner_fn(*args, **kwargs)
117 if check_use_auth_token:
118 kwargs = smoothly_deprecate_use_auth_token(fn_name=fn.__name__, has_token=has_token, kwargs=kwargs)
--> 120 return fn(*args, **kwargs)
TypeError: HfApi.upload_file() got an unexpected keyword argument 'identical_ok'
``` | [
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https://github.com/huggingface/datasets/issues/5508 | Saving a dataset after setting format to torch doesn't work, but only if filtering | Hey, I'm a research engineer working on language modelling wanting to contribute to open source. I was wondering if I could give it a shot? | ### Describe the bug
Saving a dataset after setting format to torch doesn't work, but only if filtering
### Steps to reproduce the bug
```
a = Dataset.from_dict({"b": [1, 2]})
a.set_format('torch')
a.save_to_disk("test_save") # saves successfully
a.filter(None).save_to_disk("test_save_filter") # does not
>> [...] TypeError: Provided `function` which is applied to all elements of table returns a `dict` of types [<class 'torch.Tensor'>]. When using `batched=True`, make sure provided `function` returns a `dict` of types like `(<class 'list'>, <class 'numpy.ndarray'>)`.
# note: skipping the format change to torch lets this work.
### Expected behavior
Saving to work
### Environment info
- `datasets` version: 2.4.0
- Platform: Linux-6.1.9-arch1-1-x86_64-with-glibc2.36
- Python version: 3.10.9
- PyArrow version: 9.0.0
- Pandas version: 1.4.4 | 306 | 25 | Saving a dataset after setting format to torch doesn't work, but only if filtering
### Describe the bug
Saving a dataset after setting format to torch doesn't work, but only if filtering
### Steps to reproduce the bug
```
a = Dataset.from_dict({"b": [1, 2]})
a.set_format('torch')
a.save_to_disk("test_save") # saves successfully
a.filter(None).save_to_disk("test_save_filter") # does not
>> [...] TypeError: Provided `function` which is applied to all elements of table returns a `dict` of types [<class 'torch.Tensor'>]. When using `batched=True`, make sure provided `function` returns a `dict` of types like `(<class 'list'>, <class 'numpy.ndarray'>)`.
# note: skipping the format change to torch lets this work.
### Expected behavior
Saving to work
### Environment info
- `datasets` version: 2.4.0
- Platform: Linux-6.1.9-arch1-1-x86_64-with-glibc2.36
- Python version: 3.10.9
- PyArrow version: 9.0.0
- Pandas version: 1.4.4
Hey, I'm a research engineer working on language modelling wanting to contribute to open source. I was wondering if I could give it a shot? | [
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https://github.com/huggingface/datasets/issues/5506 | IterableDataset and Dataset return different batch sizes when using Trainer with multiple GPUs | Hi ! `datasets` doesn't do batching - the PyTorch DataLoader does and is created by the `Trainer`. Do you pass other arguments to training_args with respect to data loading ?
Also we recently released `.to_iterable_dataset` that does pretty much what you implemented, but using contiguous shards to get a better speed:
```python
if use_iterable_dataset:
num_shards = 100
dataset = dataset.to_iterable_dataset(num_shards=num_shards)
``` | ### Describe the bug
I am training a Roberta model using 2 GPUs and the `Trainer` API with a batch size of 256.
Initially I used a standard `Dataset`, but had issues with slow data loading. After reading [this issue](https://github.com/huggingface/datasets/issues/2252), I swapped to loading my dataset as contiguous shards and passing those to an `IterableDataset`. I observed an unexpected drop in GPU memory utilization, and found the batch size returned from the model had been cut in half.
When using `Trainer` with 2 GPUs and a batch size of 256, `Dataset` returns a batch of size 512 (256 per GPU), while `IterableDataset` returns a batch size of 256 (256 total). My guess is `IterableDataset` isn't accounting for multiple cards.
### Steps to reproduce the bug
```python
import datasets
from datasets import IterableDataset
from transformers import RobertaConfig
from transformers import RobertaTokenizerFast
from transformers import RobertaForMaskedLM
from transformers import DataCollatorForLanguageModeling
from transformers import Trainer, TrainingArguments
use_iterable_dataset = True
def gen_from_shards(shards):
for shard in shards:
for example in shard:
yield example
dataset = datasets.load_from_disk('my_dataset.hf')
if use_iterable_dataset:
n_shards = 100
shards = [dataset.shard(num_shards=n_shards, index=i) for i in range(n_shards)]
dataset = IterableDataset.from_generator(gen_from_shards, gen_kwargs={"shards": shards})
tokenizer = RobertaTokenizerFast.from_pretrained("./my_tokenizer", max_len=160, use_fast=True)
config = RobertaConfig(
vocab_size=8248,
max_position_embeddings=256,
num_attention_heads=8,
num_hidden_layers=6,
type_vocab_size=1)
model = RobertaForMaskedLM(config=config)
data_collator = DataCollatorForLanguageModeling(tokenizer=tokenizer, mlm=True, mlm_probability=0.15)
training_args = TrainingArguments(
per_device_train_batch_size=256
# other args removed for brevity
)
trainer = Trainer(
model=model,
args=training_args,
data_collator=data_collator,
train_dataset=dataset,
)
trainer.train()
```
### Expected behavior
Expected `Dataset` and `IterableDataset` to have the same batch size behavior. If the current behavior is intentional, the batch size printout at the start of training should be updated. Currently, both dataset classes result in `Trainer` printing the same total batch size, even though the batch size sent to the GPUs are different.
### Environment info
datasets 2.7.1
transformers 4.25.1 | 307 | 61 | IterableDataset and Dataset return different batch sizes when using Trainer with multiple GPUs
### Describe the bug
I am training a Roberta model using 2 GPUs and the `Trainer` API with a batch size of 256.
Initially I used a standard `Dataset`, but had issues with slow data loading. After reading [this issue](https://github.com/huggingface/datasets/issues/2252), I swapped to loading my dataset as contiguous shards and passing those to an `IterableDataset`. I observed an unexpected drop in GPU memory utilization, and found the batch size returned from the model had been cut in half.
When using `Trainer` with 2 GPUs and a batch size of 256, `Dataset` returns a batch of size 512 (256 per GPU), while `IterableDataset` returns a batch size of 256 (256 total). My guess is `IterableDataset` isn't accounting for multiple cards.
### Steps to reproduce the bug
```python
import datasets
from datasets import IterableDataset
from transformers import RobertaConfig
from transformers import RobertaTokenizerFast
from transformers import RobertaForMaskedLM
from transformers import DataCollatorForLanguageModeling
from transformers import Trainer, TrainingArguments
use_iterable_dataset = True
def gen_from_shards(shards):
for shard in shards:
for example in shard:
yield example
dataset = datasets.load_from_disk('my_dataset.hf')
if use_iterable_dataset:
n_shards = 100
shards = [dataset.shard(num_shards=n_shards, index=i) for i in range(n_shards)]
dataset = IterableDataset.from_generator(gen_from_shards, gen_kwargs={"shards": shards})
tokenizer = RobertaTokenizerFast.from_pretrained("./my_tokenizer", max_len=160, use_fast=True)
config = RobertaConfig(
vocab_size=8248,
max_position_embeddings=256,
num_attention_heads=8,
num_hidden_layers=6,
type_vocab_size=1)
model = RobertaForMaskedLM(config=config)
data_collator = DataCollatorForLanguageModeling(tokenizer=tokenizer, mlm=True, mlm_probability=0.15)
training_args = TrainingArguments(
per_device_train_batch_size=256
# other args removed for brevity
)
trainer = Trainer(
model=model,
args=training_args,
data_collator=data_collator,
train_dataset=dataset,
)
trainer.train()
```
### Expected behavior
Expected `Dataset` and `IterableDataset` to have the same batch size behavior. If the current behavior is intentional, the batch size printout at the start of training should be updated. Currently, both dataset classes result in `Trainer` printing the same total batch size, even though the batch size sent to the GPUs are different.
### Environment info
datasets 2.7.1
transformers 4.25.1
Hi ! `datasets` doesn't do batching - the PyTorch DataLoader does and is created by the `Trainer`. Do you pass other arguments to training_args with respect to data loading ?
Also we recently released `.to_iterable_dataset` that does pretty much what you implemented, but using contiguous shards to get a better speed:
```python
if use_iterable_dataset:
num_shards = 100
dataset = dataset.to_iterable_dataset(num_shards=num_shards)
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] |
https://github.com/huggingface/datasets/issues/5506 | IterableDataset and Dataset return different batch sizes when using Trainer with multiple GPUs | This is the full set of training args passed. No training args were changed when switching dataset types.
```python
training_args = TrainingArguments(
output_dir="./checkpoints",
overwrite_output_dir=True,
num_train_epochs=1,
per_device_train_batch_size=256,
save_steps=2000,
save_total_limit=4,
prediction_loss_only=True,
report_to='none',
gradient_accumulation_steps=6,
fp16=True,
max_steps=60000,
lr_scheduler_type='linear',
warmup_ratio=0.1,
logging_steps=100,
weight_decay=0.01,
adam_beta1=0.9,
adam_beta2=0.98,
adam_epsilon=1e-6,
learning_rate=1e-4
)
``` | ### Describe the bug
I am training a Roberta model using 2 GPUs and the `Trainer` API with a batch size of 256.
Initially I used a standard `Dataset`, but had issues with slow data loading. After reading [this issue](https://github.com/huggingface/datasets/issues/2252), I swapped to loading my dataset as contiguous shards and passing those to an `IterableDataset`. I observed an unexpected drop in GPU memory utilization, and found the batch size returned from the model had been cut in half.
When using `Trainer` with 2 GPUs and a batch size of 256, `Dataset` returns a batch of size 512 (256 per GPU), while `IterableDataset` returns a batch size of 256 (256 total). My guess is `IterableDataset` isn't accounting for multiple cards.
### Steps to reproduce the bug
```python
import datasets
from datasets import IterableDataset
from transformers import RobertaConfig
from transformers import RobertaTokenizerFast
from transformers import RobertaForMaskedLM
from transformers import DataCollatorForLanguageModeling
from transformers import Trainer, TrainingArguments
use_iterable_dataset = True
def gen_from_shards(shards):
for shard in shards:
for example in shard:
yield example
dataset = datasets.load_from_disk('my_dataset.hf')
if use_iterable_dataset:
n_shards = 100
shards = [dataset.shard(num_shards=n_shards, index=i) for i in range(n_shards)]
dataset = IterableDataset.from_generator(gen_from_shards, gen_kwargs={"shards": shards})
tokenizer = RobertaTokenizerFast.from_pretrained("./my_tokenizer", max_len=160, use_fast=True)
config = RobertaConfig(
vocab_size=8248,
max_position_embeddings=256,
num_attention_heads=8,
num_hidden_layers=6,
type_vocab_size=1)
model = RobertaForMaskedLM(config=config)
data_collator = DataCollatorForLanguageModeling(tokenizer=tokenizer, mlm=True, mlm_probability=0.15)
training_args = TrainingArguments(
per_device_train_batch_size=256
# other args removed for brevity
)
trainer = Trainer(
model=model,
args=training_args,
data_collator=data_collator,
train_dataset=dataset,
)
trainer.train()
```
### Expected behavior
Expected `Dataset` and `IterableDataset` to have the same batch size behavior. If the current behavior is intentional, the batch size printout at the start of training should be updated. Currently, both dataset classes result in `Trainer` printing the same total batch size, even though the batch size sent to the GPUs are different.
### Environment info
datasets 2.7.1
transformers 4.25.1 | 307 | 43 | IterableDataset and Dataset return different batch sizes when using Trainer with multiple GPUs
### Describe the bug
I am training a Roberta model using 2 GPUs and the `Trainer` API with a batch size of 256.
Initially I used a standard `Dataset`, but had issues with slow data loading. After reading [this issue](https://github.com/huggingface/datasets/issues/2252), I swapped to loading my dataset as contiguous shards and passing those to an `IterableDataset`. I observed an unexpected drop in GPU memory utilization, and found the batch size returned from the model had been cut in half.
When using `Trainer` with 2 GPUs and a batch size of 256, `Dataset` returns a batch of size 512 (256 per GPU), while `IterableDataset` returns a batch size of 256 (256 total). My guess is `IterableDataset` isn't accounting for multiple cards.
### Steps to reproduce the bug
```python
import datasets
from datasets import IterableDataset
from transformers import RobertaConfig
from transformers import RobertaTokenizerFast
from transformers import RobertaForMaskedLM
from transformers import DataCollatorForLanguageModeling
from transformers import Trainer, TrainingArguments
use_iterable_dataset = True
def gen_from_shards(shards):
for shard in shards:
for example in shard:
yield example
dataset = datasets.load_from_disk('my_dataset.hf')
if use_iterable_dataset:
n_shards = 100
shards = [dataset.shard(num_shards=n_shards, index=i) for i in range(n_shards)]
dataset = IterableDataset.from_generator(gen_from_shards, gen_kwargs={"shards": shards})
tokenizer = RobertaTokenizerFast.from_pretrained("./my_tokenizer", max_len=160, use_fast=True)
config = RobertaConfig(
vocab_size=8248,
max_position_embeddings=256,
num_attention_heads=8,
num_hidden_layers=6,
type_vocab_size=1)
model = RobertaForMaskedLM(config=config)
data_collator = DataCollatorForLanguageModeling(tokenizer=tokenizer, mlm=True, mlm_probability=0.15)
training_args = TrainingArguments(
per_device_train_batch_size=256
# other args removed for brevity
)
trainer = Trainer(
model=model,
args=training_args,
data_collator=data_collator,
train_dataset=dataset,
)
trainer.train()
```
### Expected behavior
Expected `Dataset` and `IterableDataset` to have the same batch size behavior. If the current behavior is intentional, the batch size printout at the start of training should be updated. Currently, both dataset classes result in `Trainer` printing the same total batch size, even though the batch size sent to the GPUs are different.
### Environment info
datasets 2.7.1
transformers 4.25.1
This is the full set of training args passed. No training args were changed when switching dataset types.
```python
training_args = TrainingArguments(
output_dir="./checkpoints",
overwrite_output_dir=True,
num_train_epochs=1,
per_device_train_batch_size=256,
save_steps=2000,
save_total_limit=4,
prediction_loss_only=True,
report_to='none',
gradient_accumulation_steps=6,
fp16=True,
max_steps=60000,
lr_scheduler_type='linear',
warmup_ratio=0.1,
logging_steps=100,
weight_decay=0.01,
adam_beta1=0.9,
adam_beta2=0.98,
adam_epsilon=1e-6,
learning_rate=1e-4
)
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https://github.com/huggingface/datasets/issues/5506 | IterableDataset and Dataset return different batch sizes when using Trainer with multiple GPUs | Makes sense. Given that it's a `transformers` issue and already being tracked, I'll close this out. | ### Describe the bug
I am training a Roberta model using 2 GPUs and the `Trainer` API with a batch size of 256.
Initially I used a standard `Dataset`, but had issues with slow data loading. After reading [this issue](https://github.com/huggingface/datasets/issues/2252), I swapped to loading my dataset as contiguous shards and passing those to an `IterableDataset`. I observed an unexpected drop in GPU memory utilization, and found the batch size returned from the model had been cut in half.
When using `Trainer` with 2 GPUs and a batch size of 256, `Dataset` returns a batch of size 512 (256 per GPU), while `IterableDataset` returns a batch size of 256 (256 total). My guess is `IterableDataset` isn't accounting for multiple cards.
### Steps to reproduce the bug
```python
import datasets
from datasets import IterableDataset
from transformers import RobertaConfig
from transformers import RobertaTokenizerFast
from transformers import RobertaForMaskedLM
from transformers import DataCollatorForLanguageModeling
from transformers import Trainer, TrainingArguments
use_iterable_dataset = True
def gen_from_shards(shards):
for shard in shards:
for example in shard:
yield example
dataset = datasets.load_from_disk('my_dataset.hf')
if use_iterable_dataset:
n_shards = 100
shards = [dataset.shard(num_shards=n_shards, index=i) for i in range(n_shards)]
dataset = IterableDataset.from_generator(gen_from_shards, gen_kwargs={"shards": shards})
tokenizer = RobertaTokenizerFast.from_pretrained("./my_tokenizer", max_len=160, use_fast=True)
config = RobertaConfig(
vocab_size=8248,
max_position_embeddings=256,
num_attention_heads=8,
num_hidden_layers=6,
type_vocab_size=1)
model = RobertaForMaskedLM(config=config)
data_collator = DataCollatorForLanguageModeling(tokenizer=tokenizer, mlm=True, mlm_probability=0.15)
training_args = TrainingArguments(
per_device_train_batch_size=256
# other args removed for brevity
)
trainer = Trainer(
model=model,
args=training_args,
data_collator=data_collator,
train_dataset=dataset,
)
trainer.train()
```
### Expected behavior
Expected `Dataset` and `IterableDataset` to have the same batch size behavior. If the current behavior is intentional, the batch size printout at the start of training should be updated. Currently, both dataset classes result in `Trainer` printing the same total batch size, even though the batch size sent to the GPUs are different.
### Environment info
datasets 2.7.1
transformers 4.25.1 | 307 | 16 | IterableDataset and Dataset return different batch sizes when using Trainer with multiple GPUs
### Describe the bug
I am training a Roberta model using 2 GPUs and the `Trainer` API with a batch size of 256.
Initially I used a standard `Dataset`, but had issues with slow data loading. After reading [this issue](https://github.com/huggingface/datasets/issues/2252), I swapped to loading my dataset as contiguous shards and passing those to an `IterableDataset`. I observed an unexpected drop in GPU memory utilization, and found the batch size returned from the model had been cut in half.
When using `Trainer` with 2 GPUs and a batch size of 256, `Dataset` returns a batch of size 512 (256 per GPU), while `IterableDataset` returns a batch size of 256 (256 total). My guess is `IterableDataset` isn't accounting for multiple cards.
### Steps to reproduce the bug
```python
import datasets
from datasets import IterableDataset
from transformers import RobertaConfig
from transformers import RobertaTokenizerFast
from transformers import RobertaForMaskedLM
from transformers import DataCollatorForLanguageModeling
from transformers import Trainer, TrainingArguments
use_iterable_dataset = True
def gen_from_shards(shards):
for shard in shards:
for example in shard:
yield example
dataset = datasets.load_from_disk('my_dataset.hf')
if use_iterable_dataset:
n_shards = 100
shards = [dataset.shard(num_shards=n_shards, index=i) for i in range(n_shards)]
dataset = IterableDataset.from_generator(gen_from_shards, gen_kwargs={"shards": shards})
tokenizer = RobertaTokenizerFast.from_pretrained("./my_tokenizer", max_len=160, use_fast=True)
config = RobertaConfig(
vocab_size=8248,
max_position_embeddings=256,
num_attention_heads=8,
num_hidden_layers=6,
type_vocab_size=1)
model = RobertaForMaskedLM(config=config)
data_collator = DataCollatorForLanguageModeling(tokenizer=tokenizer, mlm=True, mlm_probability=0.15)
training_args = TrainingArguments(
per_device_train_batch_size=256
# other args removed for brevity
)
trainer = Trainer(
model=model,
args=training_args,
data_collator=data_collator,
train_dataset=dataset,
)
trainer.train()
```
### Expected behavior
Expected `Dataset` and `IterableDataset` to have the same batch size behavior. If the current behavior is intentional, the batch size printout at the start of training should be updated. Currently, both dataset classes result in `Trainer` printing the same total batch size, even though the batch size sent to the GPUs are different.
### Environment info
datasets 2.7.1
transformers 4.25.1
Makes sense. Given that it's a `transformers` issue and already being tracked, I'll close this out. | [
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https://github.com/huggingface/datasets/issues/5505 | PyTorch BatchSampler still loads from Dataset one-by-one | This change seems to come from a few months ago in the PyTorch side. That's good news and it means we may not need to pass a batch_sampler as soon as we add `Dataset.__getitems__` to get the optimal speed :)
Thanks for reporting ! Would you like to open a PR to add `__getitems__` and remove this outdated documentation ? | ### Describe the bug
In [the docs here](https://huggingface.co/docs/datasets/use_with_pytorch#use-a-batchsampler), it mentions the issue of the Dataset being read one-by-one, then states that using a BatchSampler resolves the issue.
I'm not sure if this is a mistake in the docs or the code, but it seems that the only way for a Dataset to be passed a list of indexes by PyTorch (instead of one index at a time) is to define a `__getitems__` method (note the plural) on the Dataset object, and since the HF Dataset doesn't have this, PyTorch executes [this line of code](https://github.com/pytorch/pytorch/blob/master/torch/utils/data/_utils/fetch.py#L58), reverting to fetching one-by-one.
### Steps to reproduce the bug
You can put a breakpoint in `Dataset.__getitem__()` or just print the args from there and see that it's called multiple times for a single `next(iter(dataloader))`, even when using the code from the docs:
```py
from torch.utils.data.sampler import BatchSampler, RandomSampler
batch_sampler = BatchSampler(RandomSampler(ds), batch_size=32, drop_last=False)
dataloader = DataLoader(ds, batch_sampler=batch_sampler)
```
### Expected behavior
The expected behaviour would be for it to fetch batches from the dataset, rather than one-by-one.
To demonstrate that there is room for improvement: once I have a HF dataset `ds`, if I just add this line:
```py
ds.__getitems__ = ds.__getitem__
```
...then the time taken to loop over the dataset improves considerably (for wikitext-103, from one minute to 13 seconds with batch size 32). Probably not a big deal in the grand scheme of things, but seems like an easy win.
### Environment info
- `datasets` version: 2.9.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 10.0.1
- Pandas version: 1.5.3 | 308 | 60 | PyTorch BatchSampler still loads from Dataset one-by-one
### Describe the bug
In [the docs here](https://huggingface.co/docs/datasets/use_with_pytorch#use-a-batchsampler), it mentions the issue of the Dataset being read one-by-one, then states that using a BatchSampler resolves the issue.
I'm not sure if this is a mistake in the docs or the code, but it seems that the only way for a Dataset to be passed a list of indexes by PyTorch (instead of one index at a time) is to define a `__getitems__` method (note the plural) on the Dataset object, and since the HF Dataset doesn't have this, PyTorch executes [this line of code](https://github.com/pytorch/pytorch/blob/master/torch/utils/data/_utils/fetch.py#L58), reverting to fetching one-by-one.
### Steps to reproduce the bug
You can put a breakpoint in `Dataset.__getitem__()` or just print the args from there and see that it's called multiple times for a single `next(iter(dataloader))`, even when using the code from the docs:
```py
from torch.utils.data.sampler import BatchSampler, RandomSampler
batch_sampler = BatchSampler(RandomSampler(ds), batch_size=32, drop_last=False)
dataloader = DataLoader(ds, batch_sampler=batch_sampler)
```
### Expected behavior
The expected behaviour would be for it to fetch batches from the dataset, rather than one-by-one.
To demonstrate that there is room for improvement: once I have a HF dataset `ds`, if I just add this line:
```py
ds.__getitems__ = ds.__getitem__
```
...then the time taken to loop over the dataset improves considerably (for wikitext-103, from one minute to 13 seconds with batch size 32). Probably not a big deal in the grand scheme of things, but seems like an easy win.
### Environment info
- `datasets` version: 2.9.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 10.0.1
- Pandas version: 1.5.3
This change seems to come from a few months ago in the PyTorch side. That's good news and it means we may not need to pass a batch_sampler as soon as we add `Dataset.__getitems__` to get the optimal speed :)
Thanks for reporting ! Would you like to open a PR to add `__getitems__` and remove this outdated documentation ? | [
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https://github.com/huggingface/datasets/issues/5505 | PyTorch BatchSampler still loads from Dataset one-by-one | Yeah I figured this was the sort of thing that probably once worked. I can confirm that you no longer need the batch sampler, just `batch_size=n` in the `DataLoader`.
I'll pass on the PR, I'm flat out right now, sorry. | ### Describe the bug
In [the docs here](https://huggingface.co/docs/datasets/use_with_pytorch#use-a-batchsampler), it mentions the issue of the Dataset being read one-by-one, then states that using a BatchSampler resolves the issue.
I'm not sure if this is a mistake in the docs or the code, but it seems that the only way for a Dataset to be passed a list of indexes by PyTorch (instead of one index at a time) is to define a `__getitems__` method (note the plural) on the Dataset object, and since the HF Dataset doesn't have this, PyTorch executes [this line of code](https://github.com/pytorch/pytorch/blob/master/torch/utils/data/_utils/fetch.py#L58), reverting to fetching one-by-one.
### Steps to reproduce the bug
You can put a breakpoint in `Dataset.__getitem__()` or just print the args from there and see that it's called multiple times for a single `next(iter(dataloader))`, even when using the code from the docs:
```py
from torch.utils.data.sampler import BatchSampler, RandomSampler
batch_sampler = BatchSampler(RandomSampler(ds), batch_size=32, drop_last=False)
dataloader = DataLoader(ds, batch_sampler=batch_sampler)
```
### Expected behavior
The expected behaviour would be for it to fetch batches from the dataset, rather than one-by-one.
To demonstrate that there is room for improvement: once I have a HF dataset `ds`, if I just add this line:
```py
ds.__getitems__ = ds.__getitem__
```
...then the time taken to loop over the dataset improves considerably (for wikitext-103, from one minute to 13 seconds with batch size 32). Probably not a big deal in the grand scheme of things, but seems like an easy win.
### Environment info
- `datasets` version: 2.9.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 10.0.1
- Pandas version: 1.5.3 | 308 | 40 | PyTorch BatchSampler still loads from Dataset one-by-one
### Describe the bug
In [the docs here](https://huggingface.co/docs/datasets/use_with_pytorch#use-a-batchsampler), it mentions the issue of the Dataset being read one-by-one, then states that using a BatchSampler resolves the issue.
I'm not sure if this is a mistake in the docs or the code, but it seems that the only way for a Dataset to be passed a list of indexes by PyTorch (instead of one index at a time) is to define a `__getitems__` method (note the plural) on the Dataset object, and since the HF Dataset doesn't have this, PyTorch executes [this line of code](https://github.com/pytorch/pytorch/blob/master/torch/utils/data/_utils/fetch.py#L58), reverting to fetching one-by-one.
### Steps to reproduce the bug
You can put a breakpoint in `Dataset.__getitem__()` or just print the args from there and see that it's called multiple times for a single `next(iter(dataloader))`, even when using the code from the docs:
```py
from torch.utils.data.sampler import BatchSampler, RandomSampler
batch_sampler = BatchSampler(RandomSampler(ds), batch_size=32, drop_last=False)
dataloader = DataLoader(ds, batch_sampler=batch_sampler)
```
### Expected behavior
The expected behaviour would be for it to fetch batches from the dataset, rather than one-by-one.
To demonstrate that there is room for improvement: once I have a HF dataset `ds`, if I just add this line:
```py
ds.__getitems__ = ds.__getitem__
```
...then the time taken to loop over the dataset improves considerably (for wikitext-103, from one minute to 13 seconds with batch size 32). Probably not a big deal in the grand scheme of things, but seems like an easy win.
### Environment info
- `datasets` version: 2.9.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 10.0.1
- Pandas version: 1.5.3
Yeah I figured this was the sort of thing that probably once worked. I can confirm that you no longer need the batch sampler, just `batch_size=n` in the `DataLoader`.
I'll pass on the PR, I'm flat out right now, sorry. | [
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https://github.com/huggingface/datasets/issues/5499 | `load_dataset` has ~4 seconds of overhead for cached data | Hi ! To skip the verification step that checks if newer data exist, you can enable offline mode with `HF_DATASETS_OFFLINE=1`.
Although I agree this step should be much faster for datasets hosted on the HF Hub - we could just compare the commit hash from the local data and the remote git repository. We're not been leveraging the git commit hashes, since the library was built before we even had git repositories for each dataset on HF. | ### Feature request
When loading a dataset that has been cached locally, the `load_dataset` function takes a lot longer than it should take to fetch the dataset from disk (or memory).
This is particularly noticeable for smaller datasets. For example, wikitext-2, comparing `load_data` (once cached) and `load_from_disk`, the `load_dataset` method takes 40 times longer.
⏱ 4.84s ⮜ load_dataset
⏱ 119ms ⮜ load_from_disk
### Motivation
I assume this is doing something like checking for a newer version.
If so, that's an age old problem: do you make the user wait _every single time they load from cache_ or do you do something like load from cache always, _then_ check for a newer version and alert if they have stale data. The decision usually revolves around what percentage of the time the data will have been updated, and how dangerous old data is.
For most datasets it's extremely unlikely that there will be a newer version on any given run, so 99% of the time this is just wasted time.
Maybe you don't want to make that decision for all users, but at least having the _option_ to not wait for checks would be an improvement.
### Your contribution
. | 310 | 77 | `load_dataset` has ~4 seconds of overhead for cached data
### Feature request
When loading a dataset that has been cached locally, the `load_dataset` function takes a lot longer than it should take to fetch the dataset from disk (or memory).
This is particularly noticeable for smaller datasets. For example, wikitext-2, comparing `load_data` (once cached) and `load_from_disk`, the `load_dataset` method takes 40 times longer.
⏱ 4.84s ⮜ load_dataset
⏱ 119ms ⮜ load_from_disk
### Motivation
I assume this is doing something like checking for a newer version.
If so, that's an age old problem: do you make the user wait _every single time they load from cache_ or do you do something like load from cache always, _then_ check for a newer version and alert if they have stale data. The decision usually revolves around what percentage of the time the data will have been updated, and how dangerous old data is.
For most datasets it's extremely unlikely that there will be a newer version on any given run, so 99% of the time this is just wasted time.
Maybe you don't want to make that decision for all users, but at least having the _option_ to not wait for checks would be an improvement.
### Your contribution
.
Hi ! To skip the verification step that checks if newer data exist, you can enable offline mode with `HF_DATASETS_OFFLINE=1`.
Although I agree this step should be much faster for datasets hosted on the HF Hub - we could just compare the commit hash from the local data and the remote git repository. We're not been leveraging the git commit hashes, since the library was built before we even had git repositories for each dataset on HF. | [
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https://github.com/huggingface/datasets/issues/5498 | TypeError: 'bool' object is not iterable when filtering a datasets.arrow_dataset.Dataset | Hi! Instead of a single boolean, your filter function should return an iterable (of booleans) in the batched mode like so:
```python
train_dataset = train_dataset.filter(
function=lambda batch: [image is not None for image in batch["image"]],
batched=True,
batch_size=10)
```
PS: You can make this operation much faster by operating directly on the arrow data to skip the decoding part:
```python
train_dataset = train_dataset.with_format("arrow")
train_dataset = train_dataset.filter(
function=lambda table: table["image"].is_valid().to_pylist(),
batched=True,
batch_size=100)
train_dataset = train_dataset.with_format(None)
``` | ### Describe the bug
Hi,
Thanks for the amazing work on the library!
**Describe the bug**
I think I might have noticed a small bug in the filter method.
Having loaded a dataset using `load_dataset`, when I try to filter out empty entries with `batched=True`, I get a TypeError.
### Steps to reproduce the bug
```
train_dataset = train_dataset.filter(
function=lambda example: example["image"] is not None,
batched=True,
batch_size=10)
```
Error message:
```
File .../lib/python3.9/site-packages/datasets/fingerprint.py:480, in fingerprint_transform.<locals>._fingerprint.<locals>.wrapper(*args, **kwargs)
476 validate_fingerprint(kwargs[fingerprint_name])
478 # Call actual function
--> 480 out = func(self, *args, **kwargs)
...
-> 5666 indices_array = [i for i, to_keep in zip(indices, mask) if to_keep]
5667 if indices_mapping is not None:
5668 indices_array = pa.array(indices_array, type=pa.uint64())
TypeError: 'bool' object is not iterable
```
**Removing batched=True allows to bypass the issue.**
### Expected behavior
According to the doc, "[batch_size corresponds to the] number of examples per batch provided to function if batched = True", so we shouldn't need to remove the batchd=True arg?
source: https://huggingface.co/docs/datasets/v2.9.0/en/package_reference/main_classes#datasets.Dataset.filter
### Environment info
- `datasets` version: 2.9.0
- Platform: Linux-5.4.0-122-generic-x86_64-with-glibc2.31
- Python version: 3.9.10
- PyArrow version: 10.0.1
- Pandas version: 1.5.3 | 311 | 74 | TypeError: 'bool' object is not iterable when filtering a datasets.arrow_dataset.Dataset
### Describe the bug
Hi,
Thanks for the amazing work on the library!
**Describe the bug**
I think I might have noticed a small bug in the filter method.
Having loaded a dataset using `load_dataset`, when I try to filter out empty entries with `batched=True`, I get a TypeError.
### Steps to reproduce the bug
```
train_dataset = train_dataset.filter(
function=lambda example: example["image"] is not None,
batched=True,
batch_size=10)
```
Error message:
```
File .../lib/python3.9/site-packages/datasets/fingerprint.py:480, in fingerprint_transform.<locals>._fingerprint.<locals>.wrapper(*args, **kwargs)
476 validate_fingerprint(kwargs[fingerprint_name])
478 # Call actual function
--> 480 out = func(self, *args, **kwargs)
...
-> 5666 indices_array = [i for i, to_keep in zip(indices, mask) if to_keep]
5667 if indices_mapping is not None:
5668 indices_array = pa.array(indices_array, type=pa.uint64())
TypeError: 'bool' object is not iterable
```
**Removing batched=True allows to bypass the issue.**
### Expected behavior
According to the doc, "[batch_size corresponds to the] number of examples per batch provided to function if batched = True", so we shouldn't need to remove the batchd=True arg?
source: https://huggingface.co/docs/datasets/v2.9.0/en/package_reference/main_classes#datasets.Dataset.filter
### Environment info
- `datasets` version: 2.9.0
- Platform: Linux-5.4.0-122-generic-x86_64-with-glibc2.31
- Python version: 3.9.10
- PyArrow version: 10.0.1
- Pandas version: 1.5.3
Hi! Instead of a single boolean, your filter function should return an iterable (of booleans) in the batched mode like so:
```python
train_dataset = train_dataset.filter(
function=lambda batch: [image is not None for image in batch["image"]],
batched=True,
batch_size=10)
```
PS: You can make this operation much faster by operating directly on the arrow data to skip the decoding part:
```python
train_dataset = train_dataset.with_format("arrow")
train_dataset = train_dataset.filter(
function=lambda table: table["image"].is_valid().to_pylist(),
batched=True,
batch_size=100)
train_dataset = train_dataset.with_format(None)
``` | [
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https://github.com/huggingface/datasets/issues/5496 | Add a `reduce` method | Hi! Sure, feel free to open a PR, so we can see the API you have in mind. | ### Feature request
Right now the `Dataset` class implements `map()` and `filter()`, but leaves out the third functional idiom popular among Python users: `reduce`.
### Motivation
A `reduce` method is often useful when calculating dataset statistics, for example, the occurrence of a particular n-gram or the average line length of a code dataset.
### Your contribution
I haven't contributed to `datasets` before, but I don't expect this will be too difficult, since the implementation will closely follow that of `map` and `filter`. I could have a crack over the weekend. | 312 | 18 | Add a `reduce` method
### Feature request
Right now the `Dataset` class implements `map()` and `filter()`, but leaves out the third functional idiom popular among Python users: `reduce`.
### Motivation
A `reduce` method is often useful when calculating dataset statistics, for example, the occurrence of a particular n-gram or the average line length of a code dataset.
### Your contribution
I haven't contributed to `datasets` before, but I don't expect this will be too difficult, since the implementation will closely follow that of `map` and `filter`. I could have a crack over the weekend.
Hi! Sure, feel free to open a PR, so we can see the API you have in mind. | [
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] |
https://github.com/huggingface/datasets/issues/5495 | to_tf_dataset fails with datetime UTC columns even if not included in columns argument | Hi! This is indeed a bug in our zero-copy logic.
To fix it, instead of the line:
https://github.com/huggingface/datasets/blob/7cfac43b980ab9e4a69c2328f085770996323005/src/datasets/features/features.py#L702
we should have:
```python
return pa.types.is_primitive(pa_type) and not (pa.types.is_boolean(pa_type) or pa.types.is_temporal(pa_type))
``` | ### Describe the bug
There appears to be some eager behavior in `to_tf_dataset` that runs against every column in a dataset even if they aren't included in the columns argument. This is problematic with datetime UTC columns due to them not working with zero copy. If I don't have UTC information in my datetime column, then everything works as expected.
### Steps to reproduce the bug
```python
import numpy as np
import pandas as pd
from datasets import Dataset
df = pd.DataFrame(np.random.rand(2, 1), columns=["x"])
# df["dt"] = pd.to_datetime(["2023-01-01", "2023-01-01"]) # works fine
df["dt"] = pd.to_datetime(["2023-01-01 00:00:00.00000+00:00", "2023-01-01 00:00:00.00000+00:00"])
df.to_parquet("test.pq")
ds = Dataset.from_parquet("test.pq")
tf_ds = ds.to_tf_dataset(columns=["x"], batch_size=2, shuffle=True)
```
```
ArrowInvalid Traceback (most recent call last)
Cell In[1], line 12
8 df.to_parquet("test.pq")
11 ds = Dataset.from_parquet("test.pq")
---> 12 tf_ds = ds.to_tf_dataset(columns=["r"], batch_size=2, shuffle=True)
File ~/venv/lib/python3.8/site-packages/datasets/arrow_dataset.py:411, in TensorflowDatasetMixin.to_tf_dataset(self, batch_size, columns, shuffle, collate_fn, drop_remainder, collate_fn_args, label_cols, prefetch, num_workers)
407 dataset = self
409 # TODO(Matt, QL): deprecate the retention of label_ids and label
--> 411 output_signature, columns_to_np_types = dataset._get_output_signature(
412 dataset,
413 collate_fn=collate_fn,
414 collate_fn_args=collate_fn_args,
415 cols_to_retain=cols_to_retain,
416 batch_size=batch_size if drop_remainder else None,
417 )
419 if "labels" in output_signature:
420 if ("label_ids" in columns or "label" in columns) and "labels" not in columns:
File ~/venv/lib/python3.8/site-packages/datasets/arrow_dataset.py:254, in TensorflowDatasetMixin._get_output_signature(dataset, collate_fn, collate_fn_args, cols_to_retain, batch_size, num_test_batches)
252 for _ in range(num_test_batches):
253 indices = sample(range(len(dataset)), test_batch_size)
--> 254 test_batch = dataset[indices]
255 if cols_to_retain is not None:
256 test_batch = {key: value for key, value in test_batch.items() if key in cols_to_retain}
File ~/venv/lib/python3.8/site-packages/datasets/arrow_dataset.py:2590, in Dataset.__getitem__(self, key)
2588 def __getitem__(self, key): # noqa: F811
2589 """Can be used to index columns (by string names) or rows (by integer index or iterable of indices or bools)."""
-> 2590 return self._getitem(
2591 key,
2592 )
File ~/venv/lib/python3.8/site-packages/datasets/arrow_dataset.py:2575, in Dataset._getitem(self, key, **kwargs)
2573 formatter = get_formatter(format_type, features=self.features, **format_kwargs)
2574 pa_subtable = query_table(self._data, key, indices=self._indices if self._indices is not None else None)
-> 2575 formatted_output = format_table(
2576 pa_subtable, key, formatter=formatter, format_columns=format_columns, output_all_columns=output_all_columns
2577 )
2578 return formatted_output
File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:634, in format_table(table, key, formatter, format_columns, output_all_columns)
632 python_formatter = PythonFormatter(features=None)
633 if format_columns is None:
--> 634 return formatter(pa_table, query_type=query_type)
635 elif query_type == "column":
636 if key in format_columns:
File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:410, in Formatter.__call__(self, pa_table, query_type)
408 return self.format_column(pa_table)
409 elif query_type == "batch":
--> 410 return self.format_batch(pa_table)
File ~/venv/lib/python3.8/site-packages/datasets/formatting/np_formatter.py:78, in NumpyFormatter.format_batch(self, pa_table)
77 def format_batch(self, pa_table: pa.Table) -> Mapping:
---> 78 batch = self.numpy_arrow_extractor().extract_batch(pa_table)
79 batch = self.python_features_decoder.decode_batch(batch)
80 batch = self.recursive_tensorize(batch)
File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:164, in NumpyArrowExtractor.extract_batch(self, pa_table)
163 def extract_batch(self, pa_table: pa.Table) -> dict:
--> 164 return {col: self._arrow_array_to_numpy(pa_table[col]) for col in pa_table.column_names}
File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:164, in <dictcomp>(.0)
163 def extract_batch(self, pa_table: pa.Table) -> dict:
--> 164 return {col: self._arrow_array_to_numpy(pa_table[col]) for col in pa_table.column_names}
File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:185, in NumpyArrowExtractor._arrow_array_to_numpy(self, pa_array)
181 else:
182 zero_copy_only = _is_zero_copy_only(pa_array.type) and all(
183 not _is_array_with_nulls(chunk) for chunk in pa_array.chunks
184 )
--> 185 array: List = [
186 row for chunk in pa_array.chunks for row in chunk.to_numpy(zero_copy_only=zero_copy_only)
187 ]
188 else:
189 if isinstance(pa_array.type, _ArrayXDExtensionType):
190 # don't call to_pylist() to preserve dtype of the fixed-size array
File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:186, in <listcomp>(.0)
181 else:
182 zero_copy_only = _is_zero_copy_only(pa_array.type) and all(
183 not _is_array_with_nulls(chunk) for chunk in pa_array.chunks
184 )
185 array: List = [
--> 186 row for chunk in pa_array.chunks for row in chunk.to_numpy(zero_copy_only=zero_copy_only)
187 ]
188 else:
189 if isinstance(pa_array.type, _ArrayXDExtensionType):
190 # don't call to_pylist() to preserve dtype of the fixed-size array
File ~/venv/lib/python3.8/site-packages/pyarrow/array.pxi:1475, in pyarrow.lib.Array.to_numpy()
File ~/venv/lib/python3.8/site-packages/pyarrow/error.pxi:100, in pyarrow.lib.check_status()
ArrowInvalid: Needed to copy 1 chunks with 0 nulls, but zero_copy_only was True
```
### Expected behavior
I think there are two potential issues/fixes
1. Proper handling of datetime UTC columns (perhaps there is something incorrect with zero copy handling here)
2. Not eagerly running against every column in a dataset when the columns argument of `to_tf_dataset` specifies a subset of columns (although I'm not sure if this is unavoidable)
### Environment info
- `datasets` version: 2.9.0
- Platform: macOS-13.2-x86_64-i386-64bit
- Python version: 3.8.12
- PyArrow version: 11.0.0
- Pandas version: 1.5.3
| 313 | 30 | to_tf_dataset fails with datetime UTC columns even if not included in columns argument
### Describe the bug
There appears to be some eager behavior in `to_tf_dataset` that runs against every column in a dataset even if they aren't included in the columns argument. This is problematic with datetime UTC columns due to them not working with zero copy. If I don't have UTC information in my datetime column, then everything works as expected.
### Steps to reproduce the bug
```python
import numpy as np
import pandas as pd
from datasets import Dataset
df = pd.DataFrame(np.random.rand(2, 1), columns=["x"])
# df["dt"] = pd.to_datetime(["2023-01-01", "2023-01-01"]) # works fine
df["dt"] = pd.to_datetime(["2023-01-01 00:00:00.00000+00:00", "2023-01-01 00:00:00.00000+00:00"])
df.to_parquet("test.pq")
ds = Dataset.from_parquet("test.pq")
tf_ds = ds.to_tf_dataset(columns=["x"], batch_size=2, shuffle=True)
```
```
ArrowInvalid Traceback (most recent call last)
Cell In[1], line 12
8 df.to_parquet("test.pq")
11 ds = Dataset.from_parquet("test.pq")
---> 12 tf_ds = ds.to_tf_dataset(columns=["r"], batch_size=2, shuffle=True)
File ~/venv/lib/python3.8/site-packages/datasets/arrow_dataset.py:411, in TensorflowDatasetMixin.to_tf_dataset(self, batch_size, columns, shuffle, collate_fn, drop_remainder, collate_fn_args, label_cols, prefetch, num_workers)
407 dataset = self
409 # TODO(Matt, QL): deprecate the retention of label_ids and label
--> 411 output_signature, columns_to_np_types = dataset._get_output_signature(
412 dataset,
413 collate_fn=collate_fn,
414 collate_fn_args=collate_fn_args,
415 cols_to_retain=cols_to_retain,
416 batch_size=batch_size if drop_remainder else None,
417 )
419 if "labels" in output_signature:
420 if ("label_ids" in columns or "label" in columns) and "labels" not in columns:
File ~/venv/lib/python3.8/site-packages/datasets/arrow_dataset.py:254, in TensorflowDatasetMixin._get_output_signature(dataset, collate_fn, collate_fn_args, cols_to_retain, batch_size, num_test_batches)
252 for _ in range(num_test_batches):
253 indices = sample(range(len(dataset)), test_batch_size)
--> 254 test_batch = dataset[indices]
255 if cols_to_retain is not None:
256 test_batch = {key: value for key, value in test_batch.items() if key in cols_to_retain}
File ~/venv/lib/python3.8/site-packages/datasets/arrow_dataset.py:2590, in Dataset.__getitem__(self, key)
2588 def __getitem__(self, key): # noqa: F811
2589 """Can be used to index columns (by string names) or rows (by integer index or iterable of indices or bools)."""
-> 2590 return self._getitem(
2591 key,
2592 )
File ~/venv/lib/python3.8/site-packages/datasets/arrow_dataset.py:2575, in Dataset._getitem(self, key, **kwargs)
2573 formatter = get_formatter(format_type, features=self.features, **format_kwargs)
2574 pa_subtable = query_table(self._data, key, indices=self._indices if self._indices is not None else None)
-> 2575 formatted_output = format_table(
2576 pa_subtable, key, formatter=formatter, format_columns=format_columns, output_all_columns=output_all_columns
2577 )
2578 return formatted_output
File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:634, in format_table(table, key, formatter, format_columns, output_all_columns)
632 python_formatter = PythonFormatter(features=None)
633 if format_columns is None:
--> 634 return formatter(pa_table, query_type=query_type)
635 elif query_type == "column":
636 if key in format_columns:
File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:410, in Formatter.__call__(self, pa_table, query_type)
408 return self.format_column(pa_table)
409 elif query_type == "batch":
--> 410 return self.format_batch(pa_table)
File ~/venv/lib/python3.8/site-packages/datasets/formatting/np_formatter.py:78, in NumpyFormatter.format_batch(self, pa_table)
77 def format_batch(self, pa_table: pa.Table) -> Mapping:
---> 78 batch = self.numpy_arrow_extractor().extract_batch(pa_table)
79 batch = self.python_features_decoder.decode_batch(batch)
80 batch = self.recursive_tensorize(batch)
File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:164, in NumpyArrowExtractor.extract_batch(self, pa_table)
163 def extract_batch(self, pa_table: pa.Table) -> dict:
--> 164 return {col: self._arrow_array_to_numpy(pa_table[col]) for col in pa_table.column_names}
File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:164, in <dictcomp>(.0)
163 def extract_batch(self, pa_table: pa.Table) -> dict:
--> 164 return {col: self._arrow_array_to_numpy(pa_table[col]) for col in pa_table.column_names}
File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:185, in NumpyArrowExtractor._arrow_array_to_numpy(self, pa_array)
181 else:
182 zero_copy_only = _is_zero_copy_only(pa_array.type) and all(
183 not _is_array_with_nulls(chunk) for chunk in pa_array.chunks
184 )
--> 185 array: List = [
186 row for chunk in pa_array.chunks for row in chunk.to_numpy(zero_copy_only=zero_copy_only)
187 ]
188 else:
189 if isinstance(pa_array.type, _ArrayXDExtensionType):
190 # don't call to_pylist() to preserve dtype of the fixed-size array
File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:186, in <listcomp>(.0)
181 else:
182 zero_copy_only = _is_zero_copy_only(pa_array.type) and all(
183 not _is_array_with_nulls(chunk) for chunk in pa_array.chunks
184 )
185 array: List = [
--> 186 row for chunk in pa_array.chunks for row in chunk.to_numpy(zero_copy_only=zero_copy_only)
187 ]
188 else:
189 if isinstance(pa_array.type, _ArrayXDExtensionType):
190 # don't call to_pylist() to preserve dtype of the fixed-size array
File ~/venv/lib/python3.8/site-packages/pyarrow/array.pxi:1475, in pyarrow.lib.Array.to_numpy()
File ~/venv/lib/python3.8/site-packages/pyarrow/error.pxi:100, in pyarrow.lib.check_status()
ArrowInvalid: Needed to copy 1 chunks with 0 nulls, but zero_copy_only was True
```
### Expected behavior
I think there are two potential issues/fixes
1. Proper handling of datetime UTC columns (perhaps there is something incorrect with zero copy handling here)
2. Not eagerly running against every column in a dataset when the columns argument of `to_tf_dataset` specifies a subset of columns (although I'm not sure if this is unavoidable)
### Environment info
- `datasets` version: 2.9.0
- Platform: macOS-13.2-x86_64-i386-64bit
- Python version: 3.8.12
- PyArrow version: 11.0.0
- Pandas version: 1.5.3
Hi! This is indeed a bug in our zero-copy logic.
To fix it, instead of the line:
https://github.com/huggingface/datasets/blob/7cfac43b980ab9e4a69c2328f085770996323005/src/datasets/features/features.py#L702
we should have:
```python
return pa.types.is_primitive(pa_type) and not (pa.types.is_boolean(pa_type) or pa.types.is_temporal(pa_type))
``` | [
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https://github.com/huggingface/datasets/issues/5494 | Update audio installation doc page | Totally agree, the docs should be in sync with our code.
Indeed to avoid confusing users, I think we should have updated the docs at the same time as this PR:
- #5167 | Our [installation documentation page](https://huggingface.co/docs/datasets/installation#audio) says that one can use Datasets for mp3 only with `torchaudio<0.12`. `torchaudio>0.12` is actually supported too but requires a specific version of ffmpeg which is not easily installed on all linux versions but there is a custom ubuntu repo for it, we have insctructions in the code: https://github.com/huggingface/datasets/blob/main/src/datasets/features/audio.py#L327
So we should update the doc page. But first investigate [this issue](5488). | 314 | 33 | Update audio installation doc page
Our [installation documentation page](https://huggingface.co/docs/datasets/installation#audio) says that one can use Datasets for mp3 only with `torchaudio<0.12`. `torchaudio>0.12` is actually supported too but requires a specific version of ffmpeg which is not easily installed on all linux versions but there is a custom ubuntu repo for it, we have insctructions in the code: https://github.com/huggingface/datasets/blob/main/src/datasets/features/audio.py#L327
So we should update the doc page. But first investigate [this issue](5488).
Totally agree, the docs should be in sync with our code.
Indeed to avoid confusing users, I think we should have updated the docs at the same time as this PR:
- #5167 | [
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https://github.com/huggingface/datasets/issues/5494 | Update audio installation doc page | No, @polinaeterna, nothing to be sorry about.
My comment was for all of us datasets team, as a reminder: when making a PR, but also when reviewing some other's PR, we should not forget to update the corresponding docstring and doc pages. It is something we can improve if we help each other in reminding about it... :hugs: | Our [installation documentation page](https://huggingface.co/docs/datasets/installation#audio) says that one can use Datasets for mp3 only with `torchaudio<0.12`. `torchaudio>0.12` is actually supported too but requires a specific version of ffmpeg which is not easily installed on all linux versions but there is a custom ubuntu repo for it, we have insctructions in the code: https://github.com/huggingface/datasets/blob/main/src/datasets/features/audio.py#L327
So we should update the doc page. But first investigate [this issue](5488). | 314 | 58 | Update audio installation doc page
Our [installation documentation page](https://huggingface.co/docs/datasets/installation#audio) says that one can use Datasets for mp3 only with `torchaudio<0.12`. `torchaudio>0.12` is actually supported too but requires a specific version of ffmpeg which is not easily installed on all linux versions but there is a custom ubuntu repo for it, we have insctructions in the code: https://github.com/huggingface/datasets/blob/main/src/datasets/features/audio.py#L327
So we should update the doc page. But first investigate [this issue](5488).
No, @polinaeterna, nothing to be sorry about.
My comment was for all of us datasets team, as a reminder: when making a PR, but also when reviewing some other's PR, we should not forget to update the corresponding docstring and doc pages. It is something we can improve if we help each other in reminding about it... :hugs: | [
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https://github.com/huggingface/datasets/issues/5494 | Update audio installation doc page | @polinaeterna I think we can close this issue now as we no longer use `torchaudio` for decoding. | Our [installation documentation page](https://huggingface.co/docs/datasets/installation#audio) says that one can use Datasets for mp3 only with `torchaudio<0.12`. `torchaudio>0.12` is actually supported too but requires a specific version of ffmpeg which is not easily installed on all linux versions but there is a custom ubuntu repo for it, we have insctructions in the code: https://github.com/huggingface/datasets/blob/main/src/datasets/features/audio.py#L327
So we should update the doc page. But first investigate [this issue](5488). | 314 | 17 | Update audio installation doc page
Our [installation documentation page](https://huggingface.co/docs/datasets/installation#audio) says that one can use Datasets for mp3 only with `torchaudio<0.12`. `torchaudio>0.12` is actually supported too but requires a specific version of ffmpeg which is not easily installed on all linux versions but there is a custom ubuntu repo for it, we have insctructions in the code: https://github.com/huggingface/datasets/blob/main/src/datasets/features/audio.py#L327
So we should update the doc page. But first investigate [this issue](5488).
@polinaeterna I think we can close this issue now as we no longer use `torchaudio` for decoding. | [
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https://github.com/huggingface/datasets/issues/5492 | Push_to_hub in a pull request | Assigned to myself and will get to it in the next week, but if someone finds this issue annoying and wants to submit a PR before I do, just ping me here and I'll reassign :). | Right now `ds.push_to_hub()` can push a dataset on `main` or on a new branch with `branch=`, but there is no way to open a pull request. Even passing `branch=refs/pr/x` doesn't seem to work: it tries to create a branch with that name
cc @nateraw
It should be possible to tweak the use of `huggingface_hub` in `push_to_hub` to make it open a PR or push to an existing PR | 315 | 36 | Push_to_hub in a pull request
Right now `ds.push_to_hub()` can push a dataset on `main` or on a new branch with `branch=`, but there is no way to open a pull request. Even passing `branch=refs/pr/x` doesn't seem to work: it tries to create a branch with that name
cc @nateraw
It should be possible to tweak the use of `huggingface_hub` in `push_to_hub` to make it open a PR or push to an existing PR
Assigned to myself and will get to it in the next week, but if someone finds this issue annoying and wants to submit a PR before I do, just ping me here and I'll reassign :). | [
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https://github.com/huggingface/datasets/issues/5488 | Error loading MP3 files from CommonVoice | Hi @kradonneoh, thanks for reporting.
Please note that to work with audio datasets (and specifically with MP3 files) we have detailed installation instructions in our docs: https://huggingface.co/docs/datasets/installation#audio
- one of the requirements is torchaudio<0.12.0
Let us know if the problem persists after having followed them. | ### Describe the bug
When loading a CommonVoice dataset with `datasets==2.9.0` and `torchaudio>=0.12.0`, I get an error reading the audio arrays:
```python
---------------------------------------------------------------------------
LibsndfileError Traceback (most recent call last)
~/.local/lib/python3.8/site-packages/datasets/features/audio.py in _decode_mp3(self, path_or_file)
310 try: # try torchaudio anyway because sometimes it works (depending on the os and os packages installed)
--> 311 array, sampling_rate = self._decode_mp3_torchaudio(path_or_file)
312 except RuntimeError:
~/.local/lib/python3.8/site-packages/datasets/features/audio.py in _decode_mp3_torchaudio(self, path_or_file)
351
--> 352 array, sampling_rate = torchaudio.load(path_or_file, format="mp3")
353 if self.sampling_rate and self.sampling_rate != sampling_rate:
~/.local/lib/python3.8/site-packages/torchaudio/backend/soundfile_backend.py in load(filepath, frame_offset, num_frames, normalize, channels_first, format)
204 """
--> 205 with soundfile.SoundFile(filepath, "r") as file_:
206 if file_.format != "WAV" or normalize:
~/.local/lib/python3.8/site-packages/soundfile.py in __init__(self, file, mode, samplerate, channels, subtype, endian, format, closefd)
654 format, subtype, endian)
--> 655 self._file = self._open(file, mode_int, closefd)
656 if set(mode).issuperset('r+') and self.seekable():
~/.local/lib/python3.8/site-packages/soundfile.py in _open(self, file, mode_int, closefd)
1212 err = _snd.sf_error(file_ptr)
-> 1213 raise LibsndfileError(err, prefix="Error opening {0!r}: ".format(self.name))
1214 if mode_int == _snd.SFM_WRITE:
LibsndfileError: Error opening <_io.BytesIO object at 0x7fa539462090>: File contains data in an unknown format.
```
I assume this is because there's some issue with the mp3 decoding process. I've verified that I have `ffmpeg>=4` (on a Linux distro), which appears to be the fallback backend for `torchaudio,` (at least according to #4889).
### Steps to reproduce the bug
```python
dataset = load_dataset("mozilla-foundation/common_voice_11_0", "be", split="train")
dataset[0]
```
### Expected behavior
Similar behavior to `torchaudio<0.12.0`, which doesn't result in a `LibsndfileError`
### Environment info
- `datasets` version: 2.9.0
- Platform: Linux-5.15.0-52-generic-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 10.0.1
- Pandas version: 1.5.1 | 316 | 45 | Error loading MP3 files from CommonVoice
### Describe the bug
When loading a CommonVoice dataset with `datasets==2.9.0` and `torchaudio>=0.12.0`, I get an error reading the audio arrays:
```python
---------------------------------------------------------------------------
LibsndfileError Traceback (most recent call last)
~/.local/lib/python3.8/site-packages/datasets/features/audio.py in _decode_mp3(self, path_or_file)
310 try: # try torchaudio anyway because sometimes it works (depending on the os and os packages installed)
--> 311 array, sampling_rate = self._decode_mp3_torchaudio(path_or_file)
312 except RuntimeError:
~/.local/lib/python3.8/site-packages/datasets/features/audio.py in _decode_mp3_torchaudio(self, path_or_file)
351
--> 352 array, sampling_rate = torchaudio.load(path_or_file, format="mp3")
353 if self.sampling_rate and self.sampling_rate != sampling_rate:
~/.local/lib/python3.8/site-packages/torchaudio/backend/soundfile_backend.py in load(filepath, frame_offset, num_frames, normalize, channels_first, format)
204 """
--> 205 with soundfile.SoundFile(filepath, "r") as file_:
206 if file_.format != "WAV" or normalize:
~/.local/lib/python3.8/site-packages/soundfile.py in __init__(self, file, mode, samplerate, channels, subtype, endian, format, closefd)
654 format, subtype, endian)
--> 655 self._file = self._open(file, mode_int, closefd)
656 if set(mode).issuperset('r+') and self.seekable():
~/.local/lib/python3.8/site-packages/soundfile.py in _open(self, file, mode_int, closefd)
1212 err = _snd.sf_error(file_ptr)
-> 1213 raise LibsndfileError(err, prefix="Error opening {0!r}: ".format(self.name))
1214 if mode_int == _snd.SFM_WRITE:
LibsndfileError: Error opening <_io.BytesIO object at 0x7fa539462090>: File contains data in an unknown format.
```
I assume this is because there's some issue with the mp3 decoding process. I've verified that I have `ffmpeg>=4` (on a Linux distro), which appears to be the fallback backend for `torchaudio,` (at least according to #4889).
### Steps to reproduce the bug
```python
dataset = load_dataset("mozilla-foundation/common_voice_11_0", "be", split="train")
dataset[0]
```
### Expected behavior
Similar behavior to `torchaudio<0.12.0`, which doesn't result in a `LibsndfileError`
### Environment info
- `datasets` version: 2.9.0
- Platform: Linux-5.15.0-52-generic-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 10.0.1
- Pandas version: 1.5.1
Hi @kradonneoh, thanks for reporting.
Please note that to work with audio datasets (and specifically with MP3 files) we have detailed installation instructions in our docs: https://huggingface.co/docs/datasets/installation#audio
- one of the requirements is torchaudio<0.12.0
Let us know if the problem persists after having followed them. | [
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https://github.com/huggingface/datasets/issues/5488 | Error loading MP3 files from CommonVoice | I saw that and have followed it (hence the Expected Behavior section of the bug report).
Is there no intention of updating to the latest version? It does limit the version of `torch` I can use, which isn’t ideal. | ### Describe the bug
When loading a CommonVoice dataset with `datasets==2.9.0` and `torchaudio>=0.12.0`, I get an error reading the audio arrays:
```python
---------------------------------------------------------------------------
LibsndfileError Traceback (most recent call last)
~/.local/lib/python3.8/site-packages/datasets/features/audio.py in _decode_mp3(self, path_or_file)
310 try: # try torchaudio anyway because sometimes it works (depending on the os and os packages installed)
--> 311 array, sampling_rate = self._decode_mp3_torchaudio(path_or_file)
312 except RuntimeError:
~/.local/lib/python3.8/site-packages/datasets/features/audio.py in _decode_mp3_torchaudio(self, path_or_file)
351
--> 352 array, sampling_rate = torchaudio.load(path_or_file, format="mp3")
353 if self.sampling_rate and self.sampling_rate != sampling_rate:
~/.local/lib/python3.8/site-packages/torchaudio/backend/soundfile_backend.py in load(filepath, frame_offset, num_frames, normalize, channels_first, format)
204 """
--> 205 with soundfile.SoundFile(filepath, "r") as file_:
206 if file_.format != "WAV" or normalize:
~/.local/lib/python3.8/site-packages/soundfile.py in __init__(self, file, mode, samplerate, channels, subtype, endian, format, closefd)
654 format, subtype, endian)
--> 655 self._file = self._open(file, mode_int, closefd)
656 if set(mode).issuperset('r+') and self.seekable():
~/.local/lib/python3.8/site-packages/soundfile.py in _open(self, file, mode_int, closefd)
1212 err = _snd.sf_error(file_ptr)
-> 1213 raise LibsndfileError(err, prefix="Error opening {0!r}: ".format(self.name))
1214 if mode_int == _snd.SFM_WRITE:
LibsndfileError: Error opening <_io.BytesIO object at 0x7fa539462090>: File contains data in an unknown format.
```
I assume this is because there's some issue with the mp3 decoding process. I've verified that I have `ffmpeg>=4` (on a Linux distro), which appears to be the fallback backend for `torchaudio,` (at least according to #4889).
### Steps to reproduce the bug
```python
dataset = load_dataset("mozilla-foundation/common_voice_11_0", "be", split="train")
dataset[0]
```
### Expected behavior
Similar behavior to `torchaudio<0.12.0`, which doesn't result in a `LibsndfileError`
### Environment info
- `datasets` version: 2.9.0
- Platform: Linux-5.15.0-52-generic-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 10.0.1
- Pandas version: 1.5.1 | 316 | 39 | Error loading MP3 files from CommonVoice
### Describe the bug
When loading a CommonVoice dataset with `datasets==2.9.0` and `torchaudio>=0.12.0`, I get an error reading the audio arrays:
```python
---------------------------------------------------------------------------
LibsndfileError Traceback (most recent call last)
~/.local/lib/python3.8/site-packages/datasets/features/audio.py in _decode_mp3(self, path_or_file)
310 try: # try torchaudio anyway because sometimes it works (depending on the os and os packages installed)
--> 311 array, sampling_rate = self._decode_mp3_torchaudio(path_or_file)
312 except RuntimeError:
~/.local/lib/python3.8/site-packages/datasets/features/audio.py in _decode_mp3_torchaudio(self, path_or_file)
351
--> 352 array, sampling_rate = torchaudio.load(path_or_file, format="mp3")
353 if self.sampling_rate and self.sampling_rate != sampling_rate:
~/.local/lib/python3.8/site-packages/torchaudio/backend/soundfile_backend.py in load(filepath, frame_offset, num_frames, normalize, channels_first, format)
204 """
--> 205 with soundfile.SoundFile(filepath, "r") as file_:
206 if file_.format != "WAV" or normalize:
~/.local/lib/python3.8/site-packages/soundfile.py in __init__(self, file, mode, samplerate, channels, subtype, endian, format, closefd)
654 format, subtype, endian)
--> 655 self._file = self._open(file, mode_int, closefd)
656 if set(mode).issuperset('r+') and self.seekable():
~/.local/lib/python3.8/site-packages/soundfile.py in _open(self, file, mode_int, closefd)
1212 err = _snd.sf_error(file_ptr)
-> 1213 raise LibsndfileError(err, prefix="Error opening {0!r}: ".format(self.name))
1214 if mode_int == _snd.SFM_WRITE:
LibsndfileError: Error opening <_io.BytesIO object at 0x7fa539462090>: File contains data in an unknown format.
```
I assume this is because there's some issue with the mp3 decoding process. I've verified that I have `ffmpeg>=4` (on a Linux distro), which appears to be the fallback backend for `torchaudio,` (at least according to #4889).
### Steps to reproduce the bug
```python
dataset = load_dataset("mozilla-foundation/common_voice_11_0", "be", split="train")
dataset[0]
```
### Expected behavior
Similar behavior to `torchaudio<0.12.0`, which doesn't result in a `LibsndfileError`
### Environment info
- `datasets` version: 2.9.0
- Platform: Linux-5.15.0-52-generic-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 10.0.1
- Pandas version: 1.5.1
I saw that and have followed it (hence the Expected Behavior section of the bug report).
Is there no intention of updating to the latest version? It does limit the version of `torch` I can use, which isn’t ideal. | [
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https://github.com/huggingface/datasets/issues/5488 | Error loading MP3 files from CommonVoice | @kradonneoh hey! actually with `ffmpeg4` loading of mp3 files should work, so this is a not expected behavior and we need to investigate it. It works on my side with `torchaudio==0.13` and `ffmpeg==4.2.7`. Which `torchaudio` version do you use?
`datasets` should support decoding of mp3 files with `torchaudio` when its version is `>0.12` but as you noted it requires `ffmpeg>4`, we need to fix this in the documentation, thank you for pointing to this!
But according to your traceback it seems that it tries to use [`libsndfile`](https://github.com/libsndfile/libsndfile) backend for mp3 decoding. And `libsndfile` library supports mp3 decoding starting from version 1.1.0 which on Linux has to be compiled from source for now afaik.
fyi - we are aiming at getting rid of `torchaudio` dependency at all by the next major library release in favor of `libsndfile` too. | ### Describe the bug
When loading a CommonVoice dataset with `datasets==2.9.0` and `torchaudio>=0.12.0`, I get an error reading the audio arrays:
```python
---------------------------------------------------------------------------
LibsndfileError Traceback (most recent call last)
~/.local/lib/python3.8/site-packages/datasets/features/audio.py in _decode_mp3(self, path_or_file)
310 try: # try torchaudio anyway because sometimes it works (depending on the os and os packages installed)
--> 311 array, sampling_rate = self._decode_mp3_torchaudio(path_or_file)
312 except RuntimeError:
~/.local/lib/python3.8/site-packages/datasets/features/audio.py in _decode_mp3_torchaudio(self, path_or_file)
351
--> 352 array, sampling_rate = torchaudio.load(path_or_file, format="mp3")
353 if self.sampling_rate and self.sampling_rate != sampling_rate:
~/.local/lib/python3.8/site-packages/torchaudio/backend/soundfile_backend.py in load(filepath, frame_offset, num_frames, normalize, channels_first, format)
204 """
--> 205 with soundfile.SoundFile(filepath, "r") as file_:
206 if file_.format != "WAV" or normalize:
~/.local/lib/python3.8/site-packages/soundfile.py in __init__(self, file, mode, samplerate, channels, subtype, endian, format, closefd)
654 format, subtype, endian)
--> 655 self._file = self._open(file, mode_int, closefd)
656 if set(mode).issuperset('r+') and self.seekable():
~/.local/lib/python3.8/site-packages/soundfile.py in _open(self, file, mode_int, closefd)
1212 err = _snd.sf_error(file_ptr)
-> 1213 raise LibsndfileError(err, prefix="Error opening {0!r}: ".format(self.name))
1214 if mode_int == _snd.SFM_WRITE:
LibsndfileError: Error opening <_io.BytesIO object at 0x7fa539462090>: File contains data in an unknown format.
```
I assume this is because there's some issue with the mp3 decoding process. I've verified that I have `ffmpeg>=4` (on a Linux distro), which appears to be the fallback backend for `torchaudio,` (at least according to #4889).
### Steps to reproduce the bug
```python
dataset = load_dataset("mozilla-foundation/common_voice_11_0", "be", split="train")
dataset[0]
```
### Expected behavior
Similar behavior to `torchaudio<0.12.0`, which doesn't result in a `LibsndfileError`
### Environment info
- `datasets` version: 2.9.0
- Platform: Linux-5.15.0-52-generic-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 10.0.1
- Pandas version: 1.5.1 | 316 | 137 | Error loading MP3 files from CommonVoice
### Describe the bug
When loading a CommonVoice dataset with `datasets==2.9.0` and `torchaudio>=0.12.0`, I get an error reading the audio arrays:
```python
---------------------------------------------------------------------------
LibsndfileError Traceback (most recent call last)
~/.local/lib/python3.8/site-packages/datasets/features/audio.py in _decode_mp3(self, path_or_file)
310 try: # try torchaudio anyway because sometimes it works (depending on the os and os packages installed)
--> 311 array, sampling_rate = self._decode_mp3_torchaudio(path_or_file)
312 except RuntimeError:
~/.local/lib/python3.8/site-packages/datasets/features/audio.py in _decode_mp3_torchaudio(self, path_or_file)
351
--> 352 array, sampling_rate = torchaudio.load(path_or_file, format="mp3")
353 if self.sampling_rate and self.sampling_rate != sampling_rate:
~/.local/lib/python3.8/site-packages/torchaudio/backend/soundfile_backend.py in load(filepath, frame_offset, num_frames, normalize, channels_first, format)
204 """
--> 205 with soundfile.SoundFile(filepath, "r") as file_:
206 if file_.format != "WAV" or normalize:
~/.local/lib/python3.8/site-packages/soundfile.py in __init__(self, file, mode, samplerate, channels, subtype, endian, format, closefd)
654 format, subtype, endian)
--> 655 self._file = self._open(file, mode_int, closefd)
656 if set(mode).issuperset('r+') and self.seekable():
~/.local/lib/python3.8/site-packages/soundfile.py in _open(self, file, mode_int, closefd)
1212 err = _snd.sf_error(file_ptr)
-> 1213 raise LibsndfileError(err, prefix="Error opening {0!r}: ".format(self.name))
1214 if mode_int == _snd.SFM_WRITE:
LibsndfileError: Error opening <_io.BytesIO object at 0x7fa539462090>: File contains data in an unknown format.
```
I assume this is because there's some issue with the mp3 decoding process. I've verified that I have `ffmpeg>=4` (on a Linux distro), which appears to be the fallback backend for `torchaudio,` (at least according to #4889).
### Steps to reproduce the bug
```python
dataset = load_dataset("mozilla-foundation/common_voice_11_0", "be", split="train")
dataset[0]
```
### Expected behavior
Similar behavior to `torchaudio<0.12.0`, which doesn't result in a `LibsndfileError`
### Environment info
- `datasets` version: 2.9.0
- Platform: Linux-5.15.0-52-generic-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 10.0.1
- Pandas version: 1.5.1
@kradonneoh hey! actually with `ffmpeg4` loading of mp3 files should work, so this is a not expected behavior and we need to investigate it. It works on my side with `torchaudio==0.13` and `ffmpeg==4.2.7`. Which `torchaudio` version do you use?
`datasets` should support decoding of mp3 files with `torchaudio` when its version is `>0.12` but as you noted it requires `ffmpeg>4`, we need to fix this in the documentation, thank you for pointing to this!
But according to your traceback it seems that it tries to use [`libsndfile`](https://github.com/libsndfile/libsndfile) backend for mp3 decoding. And `libsndfile` library supports mp3 decoding starting from version 1.1.0 which on Linux has to be compiled from source for now afaik.
fyi - we are aiming at getting rid of `torchaudio` dependency at all by the next major library release in favor of `libsndfile` too. | [
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https://github.com/huggingface/datasets/issues/5487 | Incorrect filepath for dill module | Hi! The correct path is still `dill._dill.XXXX` in the latest release. What do you get when you run `python -c "import dill; print(dill.__version__)"` in your environment? | ### Describe the bug
I installed the `datasets` package and when I try to `import` it, I get the following error:
```
Traceback (most recent call last):
File "/var/folders/jt/zw5g74ln6tqfdzsl8tx378j00000gn/T/ipykernel_3805/3458380017.py", line 1, in <module>
import datasets
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/__init__.py", line 43, in <module>
from .arrow_dataset import Dataset
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 66, in <module>
from .arrow_writer import ArrowWriter, OptimizedTypedSequence
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_writer.py", line 27, in <module>
from .features import Features, Image, Value
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/__init__.py", line 17, in <module>
from .audio import Audio
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/audio.py", line 12, in <module>
from ..download.streaming_download_manager import xopen
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/__init__.py", line 9, in <module>
from .download_manager import DownloadManager, DownloadMode
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/download_manager.py", line 36, in <module>
from ..utils.py_utils import NestedDataStructure, map_nested, size_str
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 602, in <module>
class Pickler(dill.Pickler):
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 605, in Pickler
dispatch = dill._dill.MetaCatchingDict(dill.Pickler.dispatch.copy())
AttributeError: module 'dill' has no attribute '_dill'
```
Looking at the github source code for dill, it appears that `datasets` has a bug or is not compatible with the latest `dill`. Specifically, rather than `dill._dill.XXXX` it should be `dill.dill._dill.XXXX`. But given the popularity of `datasets` I feel confused about me being the first person to have this issue, so it makes me wonder if I'm misdiagnosing the issue.
### Steps to reproduce the bug
Install `dill` and `datasets` packages and then `import datasets`
### Expected behavior
I expect `datasets` to import.
### Environment info
- `datasets` version: 2.9.0
- Platform: macOS-10.16-x86_64-i386-64bit
- Python version: 3.9.13
- PyArrow version: 11.0.0
- Pandas version: 1.4.4 | 317 | 26 | Incorrect filepath for dill module
### Describe the bug
I installed the `datasets` package and when I try to `import` it, I get the following error:
```
Traceback (most recent call last):
File "/var/folders/jt/zw5g74ln6tqfdzsl8tx378j00000gn/T/ipykernel_3805/3458380017.py", line 1, in <module>
import datasets
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/__init__.py", line 43, in <module>
from .arrow_dataset import Dataset
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 66, in <module>
from .arrow_writer import ArrowWriter, OptimizedTypedSequence
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_writer.py", line 27, in <module>
from .features import Features, Image, Value
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/__init__.py", line 17, in <module>
from .audio import Audio
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/audio.py", line 12, in <module>
from ..download.streaming_download_manager import xopen
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/__init__.py", line 9, in <module>
from .download_manager import DownloadManager, DownloadMode
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/download_manager.py", line 36, in <module>
from ..utils.py_utils import NestedDataStructure, map_nested, size_str
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 602, in <module>
class Pickler(dill.Pickler):
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 605, in Pickler
dispatch = dill._dill.MetaCatchingDict(dill.Pickler.dispatch.copy())
AttributeError: module 'dill' has no attribute '_dill'
```
Looking at the github source code for dill, it appears that `datasets` has a bug or is not compatible with the latest `dill`. Specifically, rather than `dill._dill.XXXX` it should be `dill.dill._dill.XXXX`. But given the popularity of `datasets` I feel confused about me being the first person to have this issue, so it makes me wonder if I'm misdiagnosing the issue.
### Steps to reproduce the bug
Install `dill` and `datasets` packages and then `import datasets`
### Expected behavior
I expect `datasets` to import.
### Environment info
- `datasets` version: 2.9.0
- Platform: macOS-10.16-x86_64-i386-64bit
- Python version: 3.9.13
- PyArrow version: 11.0.0
- Pandas version: 1.4.4
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https://github.com/huggingface/datasets/issues/5487 | Incorrect filepath for dill module | `0.3.6` I feel like that's bad news, because it's probably not the issue.
My mistake, about the wrong path guess. I think I didn't notice that the first `dill` in the path isn't supposed to be included in the path specification in python.
<img width="146" alt="Screen Shot 2023-01-31 at 12 58 32 PM" src="https://user-images.githubusercontent.com/35349273/215844209-74af6a8f-9bff-4c75-9495-44c658c8e9f7.png">
| ### Describe the bug
I installed the `datasets` package and when I try to `import` it, I get the following error:
```
Traceback (most recent call last):
File "/var/folders/jt/zw5g74ln6tqfdzsl8tx378j00000gn/T/ipykernel_3805/3458380017.py", line 1, in <module>
import datasets
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/__init__.py", line 43, in <module>
from .arrow_dataset import Dataset
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 66, in <module>
from .arrow_writer import ArrowWriter, OptimizedTypedSequence
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_writer.py", line 27, in <module>
from .features import Features, Image, Value
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/__init__.py", line 17, in <module>
from .audio import Audio
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/audio.py", line 12, in <module>
from ..download.streaming_download_manager import xopen
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/__init__.py", line 9, in <module>
from .download_manager import DownloadManager, DownloadMode
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/download_manager.py", line 36, in <module>
from ..utils.py_utils import NestedDataStructure, map_nested, size_str
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 602, in <module>
class Pickler(dill.Pickler):
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 605, in Pickler
dispatch = dill._dill.MetaCatchingDict(dill.Pickler.dispatch.copy())
AttributeError: module 'dill' has no attribute '_dill'
```
Looking at the github source code for dill, it appears that `datasets` has a bug or is not compatible with the latest `dill`. Specifically, rather than `dill._dill.XXXX` it should be `dill.dill._dill.XXXX`. But given the popularity of `datasets` I feel confused about me being the first person to have this issue, so it makes me wonder if I'm misdiagnosing the issue.
### Steps to reproduce the bug
Install `dill` and `datasets` packages and then `import datasets`
### Expected behavior
I expect `datasets` to import.
### Environment info
- `datasets` version: 2.9.0
- Platform: macOS-10.16-x86_64-i386-64bit
- Python version: 3.9.13
- PyArrow version: 11.0.0
- Pandas version: 1.4.4 | 317 | 54 | Incorrect filepath for dill module
### Describe the bug
I installed the `datasets` package and when I try to `import` it, I get the following error:
```
Traceback (most recent call last):
File "/var/folders/jt/zw5g74ln6tqfdzsl8tx378j00000gn/T/ipykernel_3805/3458380017.py", line 1, in <module>
import datasets
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/__init__.py", line 43, in <module>
from .arrow_dataset import Dataset
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 66, in <module>
from .arrow_writer import ArrowWriter, OptimizedTypedSequence
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_writer.py", line 27, in <module>
from .features import Features, Image, Value
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/__init__.py", line 17, in <module>
from .audio import Audio
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/audio.py", line 12, in <module>
from ..download.streaming_download_manager import xopen
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/__init__.py", line 9, in <module>
from .download_manager import DownloadManager, DownloadMode
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/download_manager.py", line 36, in <module>
from ..utils.py_utils import NestedDataStructure, map_nested, size_str
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 602, in <module>
class Pickler(dill.Pickler):
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 605, in Pickler
dispatch = dill._dill.MetaCatchingDict(dill.Pickler.dispatch.copy())
AttributeError: module 'dill' has no attribute '_dill'
```
Looking at the github source code for dill, it appears that `datasets` has a bug or is not compatible with the latest `dill`. Specifically, rather than `dill._dill.XXXX` it should be `dill.dill._dill.XXXX`. But given the popularity of `datasets` I feel confused about me being the first person to have this issue, so it makes me wonder if I'm misdiagnosing the issue.
### Steps to reproduce the bug
Install `dill` and `datasets` packages and then `import datasets`
### Expected behavior
I expect `datasets` to import.
### Environment info
- `datasets` version: 2.9.0
- Platform: macOS-10.16-x86_64-i386-64bit
- Python version: 3.9.13
- PyArrow version: 11.0.0
- Pandas version: 1.4.4
`0.3.6` I feel like that's bad news, because it's probably not the issue.
My mistake, about the wrong path guess. I think I didn't notice that the first `dill` in the path isn't supposed to be included in the path specification in python.
<img width="146" alt="Screen Shot 2023-01-31 at 12 58 32 PM" src="https://user-images.githubusercontent.com/35349273/215844209-74af6a8f-9bff-4c75-9495-44c658c8e9f7.png">
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] |
https://github.com/huggingface/datasets/issues/5487 | Incorrect filepath for dill module | Hi, @avivbrokman, this issue you report appeared only with old versions of dill. See:
- #288
Are you sure you are in the right Python environment?
- Please note that Jupyter (where I guess you get the error) may have multiple execution backends (IPython kernels) that might be different from the Python environment your are using to get the dill version
- Have you run `import dill; print(dill.__version__)` in the same Jupyter/IPython that you were using when you got the error while executing `import datasets`? | ### Describe the bug
I installed the `datasets` package and when I try to `import` it, I get the following error:
```
Traceback (most recent call last):
File "/var/folders/jt/zw5g74ln6tqfdzsl8tx378j00000gn/T/ipykernel_3805/3458380017.py", line 1, in <module>
import datasets
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/__init__.py", line 43, in <module>
from .arrow_dataset import Dataset
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 66, in <module>
from .arrow_writer import ArrowWriter, OptimizedTypedSequence
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_writer.py", line 27, in <module>
from .features import Features, Image, Value
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/__init__.py", line 17, in <module>
from .audio import Audio
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/audio.py", line 12, in <module>
from ..download.streaming_download_manager import xopen
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/__init__.py", line 9, in <module>
from .download_manager import DownloadManager, DownloadMode
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/download_manager.py", line 36, in <module>
from ..utils.py_utils import NestedDataStructure, map_nested, size_str
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 602, in <module>
class Pickler(dill.Pickler):
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 605, in Pickler
dispatch = dill._dill.MetaCatchingDict(dill.Pickler.dispatch.copy())
AttributeError: module 'dill' has no attribute '_dill'
```
Looking at the github source code for dill, it appears that `datasets` has a bug or is not compatible with the latest `dill`. Specifically, rather than `dill._dill.XXXX` it should be `dill.dill._dill.XXXX`. But given the popularity of `datasets` I feel confused about me being the first person to have this issue, so it makes me wonder if I'm misdiagnosing the issue.
### Steps to reproduce the bug
Install `dill` and `datasets` packages and then `import datasets`
### Expected behavior
I expect `datasets` to import.
### Environment info
- `datasets` version: 2.9.0
- Platform: macOS-10.16-x86_64-i386-64bit
- Python version: 3.9.13
- PyArrow version: 11.0.0
- Pandas version: 1.4.4 | 317 | 85 | Incorrect filepath for dill module
### Describe the bug
I installed the `datasets` package and when I try to `import` it, I get the following error:
```
Traceback (most recent call last):
File "/var/folders/jt/zw5g74ln6tqfdzsl8tx378j00000gn/T/ipykernel_3805/3458380017.py", line 1, in <module>
import datasets
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/__init__.py", line 43, in <module>
from .arrow_dataset import Dataset
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 66, in <module>
from .arrow_writer import ArrowWriter, OptimizedTypedSequence
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_writer.py", line 27, in <module>
from .features import Features, Image, Value
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/__init__.py", line 17, in <module>
from .audio import Audio
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/audio.py", line 12, in <module>
from ..download.streaming_download_manager import xopen
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/__init__.py", line 9, in <module>
from .download_manager import DownloadManager, DownloadMode
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/download_manager.py", line 36, in <module>
from ..utils.py_utils import NestedDataStructure, map_nested, size_str
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 602, in <module>
class Pickler(dill.Pickler):
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 605, in Pickler
dispatch = dill._dill.MetaCatchingDict(dill.Pickler.dispatch.copy())
AttributeError: module 'dill' has no attribute '_dill'
```
Looking at the github source code for dill, it appears that `datasets` has a bug or is not compatible with the latest `dill`. Specifically, rather than `dill._dill.XXXX` it should be `dill.dill._dill.XXXX`. But given the popularity of `datasets` I feel confused about me being the first person to have this issue, so it makes me wonder if I'm misdiagnosing the issue.
### Steps to reproduce the bug
Install `dill` and `datasets` packages and then `import datasets`
### Expected behavior
I expect `datasets` to import.
### Environment info
- `datasets` version: 2.9.0
- Platform: macOS-10.16-x86_64-i386-64bit
- Python version: 3.9.13
- PyArrow version: 11.0.0
- Pandas version: 1.4.4
Hi, @avivbrokman, this issue you report appeared only with old versions of dill. See:
- #288
Are you sure you are in the right Python environment?
- Please note that Jupyter (where I guess you get the error) may have multiple execution backends (IPython kernels) that might be different from the Python environment your are using to get the dill version
- Have you run `import dill; print(dill.__version__)` in the same Jupyter/IPython that you were using when you got the error while executing `import datasets`? | [
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https://github.com/huggingface/datasets/issues/5487 | Incorrect filepath for dill module | I'm using spyder, and I am still getting `0.3.6` for `dill`, so unfortunately #288 isn't applicable, I think. However, I found something odd that I believe is a clue:
```
import inspect
import dill
inspect.getfile(dill)
>>> '/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/dill/__init__.py'
```
I checked out the directory, and there is no `dill` subdirectory within '/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/dill`, as there should be. Rather, `_dill.py` is in '/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/dill` itself.
If I run `pip install dill` or `pip install --upgrade dill`, I get the message `Requirement already satisfied: dill in ./opt/anaconda3/lib/python3.9/site-packages (0.3.6)`. If I run `conda upgrade dill`, I get the message `Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source.` a couple of times, followed by
```
Solving environment: failed
Solving environment: /
Found conflicts! Looking for incompatible packages.
```
And then terminal proceeds to list conflicts between different packages I have.
This is all very strange to me because I recently uninstalled and reinstalled `anaconda`.
| ### Describe the bug
I installed the `datasets` package and when I try to `import` it, I get the following error:
```
Traceback (most recent call last):
File "/var/folders/jt/zw5g74ln6tqfdzsl8tx378j00000gn/T/ipykernel_3805/3458380017.py", line 1, in <module>
import datasets
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/__init__.py", line 43, in <module>
from .arrow_dataset import Dataset
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 66, in <module>
from .arrow_writer import ArrowWriter, OptimizedTypedSequence
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_writer.py", line 27, in <module>
from .features import Features, Image, Value
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/__init__.py", line 17, in <module>
from .audio import Audio
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/audio.py", line 12, in <module>
from ..download.streaming_download_manager import xopen
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/__init__.py", line 9, in <module>
from .download_manager import DownloadManager, DownloadMode
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/download_manager.py", line 36, in <module>
from ..utils.py_utils import NestedDataStructure, map_nested, size_str
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 602, in <module>
class Pickler(dill.Pickler):
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 605, in Pickler
dispatch = dill._dill.MetaCatchingDict(dill.Pickler.dispatch.copy())
AttributeError: module 'dill' has no attribute '_dill'
```
Looking at the github source code for dill, it appears that `datasets` has a bug or is not compatible with the latest `dill`. Specifically, rather than `dill._dill.XXXX` it should be `dill.dill._dill.XXXX`. But given the popularity of `datasets` I feel confused about me being the first person to have this issue, so it makes me wonder if I'm misdiagnosing the issue.
### Steps to reproduce the bug
Install `dill` and `datasets` packages and then `import datasets`
### Expected behavior
I expect `datasets` to import.
### Environment info
- `datasets` version: 2.9.0
- Platform: macOS-10.16-x86_64-i386-64bit
- Python version: 3.9.13
- PyArrow version: 11.0.0
- Pandas version: 1.4.4 | 317 | 152 | Incorrect filepath for dill module
### Describe the bug
I installed the `datasets` package and when I try to `import` it, I get the following error:
```
Traceback (most recent call last):
File "/var/folders/jt/zw5g74ln6tqfdzsl8tx378j00000gn/T/ipykernel_3805/3458380017.py", line 1, in <module>
import datasets
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/__init__.py", line 43, in <module>
from .arrow_dataset import Dataset
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 66, in <module>
from .arrow_writer import ArrowWriter, OptimizedTypedSequence
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_writer.py", line 27, in <module>
from .features import Features, Image, Value
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/__init__.py", line 17, in <module>
from .audio import Audio
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/audio.py", line 12, in <module>
from ..download.streaming_download_manager import xopen
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/__init__.py", line 9, in <module>
from .download_manager import DownloadManager, DownloadMode
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/download_manager.py", line 36, in <module>
from ..utils.py_utils import NestedDataStructure, map_nested, size_str
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 602, in <module>
class Pickler(dill.Pickler):
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 605, in Pickler
dispatch = dill._dill.MetaCatchingDict(dill.Pickler.dispatch.copy())
AttributeError: module 'dill' has no attribute '_dill'
```
Looking at the github source code for dill, it appears that `datasets` has a bug or is not compatible with the latest `dill`. Specifically, rather than `dill._dill.XXXX` it should be `dill.dill._dill.XXXX`. But given the popularity of `datasets` I feel confused about me being the first person to have this issue, so it makes me wonder if I'm misdiagnosing the issue.
### Steps to reproduce the bug
Install `dill` and `datasets` packages and then `import datasets`
### Expected behavior
I expect `datasets` to import.
### Environment info
- `datasets` version: 2.9.0
- Platform: macOS-10.16-x86_64-i386-64bit
- Python version: 3.9.13
- PyArrow version: 11.0.0
- Pandas version: 1.4.4
I'm using spyder, and I am still getting `0.3.6` for `dill`, so unfortunately #288 isn't applicable, I think. However, I found something odd that I believe is a clue:
```
import inspect
import dill
inspect.getfile(dill)
>>> '/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/dill/__init__.py'
```
I checked out the directory, and there is no `dill` subdirectory within '/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/dill`, as there should be. Rather, `_dill.py` is in '/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/dill` itself.
If I run `pip install dill` or `pip install --upgrade dill`, I get the message `Requirement already satisfied: dill in ./opt/anaconda3/lib/python3.9/site-packages (0.3.6)`. If I run `conda upgrade dill`, I get the message `Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source.` a couple of times, followed by
```
Solving environment: failed
Solving environment: /
Found conflicts! Looking for incompatible packages.
```
And then terminal proceeds to list conflicts between different packages I have.
This is all very strange to me because I recently uninstalled and reinstalled `anaconda`.
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https://github.com/huggingface/datasets/issues/5487 | Incorrect filepath for dill module | As I said above, I guess this is not a problem with `datasets`. I think you have different Python environments: one with the new dill version (the one you get while using pip) and other with the old dill version (the one where you get the AttributeError).
You should update `dill` in the Python environment you are using within spyder.
Please note that the `_dill` module is present in the `dill` package since their 2.8.0 version. | ### Describe the bug
I installed the `datasets` package and when I try to `import` it, I get the following error:
```
Traceback (most recent call last):
File "/var/folders/jt/zw5g74ln6tqfdzsl8tx378j00000gn/T/ipykernel_3805/3458380017.py", line 1, in <module>
import datasets
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/__init__.py", line 43, in <module>
from .arrow_dataset import Dataset
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 66, in <module>
from .arrow_writer import ArrowWriter, OptimizedTypedSequence
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_writer.py", line 27, in <module>
from .features import Features, Image, Value
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/__init__.py", line 17, in <module>
from .audio import Audio
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/audio.py", line 12, in <module>
from ..download.streaming_download_manager import xopen
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/__init__.py", line 9, in <module>
from .download_manager import DownloadManager, DownloadMode
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/download_manager.py", line 36, in <module>
from ..utils.py_utils import NestedDataStructure, map_nested, size_str
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 602, in <module>
class Pickler(dill.Pickler):
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 605, in Pickler
dispatch = dill._dill.MetaCatchingDict(dill.Pickler.dispatch.copy())
AttributeError: module 'dill' has no attribute '_dill'
```
Looking at the github source code for dill, it appears that `datasets` has a bug or is not compatible with the latest `dill`. Specifically, rather than `dill._dill.XXXX` it should be `dill.dill._dill.XXXX`. But given the popularity of `datasets` I feel confused about me being the first person to have this issue, so it makes me wonder if I'm misdiagnosing the issue.
### Steps to reproduce the bug
Install `dill` and `datasets` packages and then `import datasets`
### Expected behavior
I expect `datasets` to import.
### Environment info
- `datasets` version: 2.9.0
- Platform: macOS-10.16-x86_64-i386-64bit
- Python version: 3.9.13
- PyArrow version: 11.0.0
- Pandas version: 1.4.4 | 317 | 76 | Incorrect filepath for dill module
### Describe the bug
I installed the `datasets` package and when I try to `import` it, I get the following error:
```
Traceback (most recent call last):
File "/var/folders/jt/zw5g74ln6tqfdzsl8tx378j00000gn/T/ipykernel_3805/3458380017.py", line 1, in <module>
import datasets
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/__init__.py", line 43, in <module>
from .arrow_dataset import Dataset
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 66, in <module>
from .arrow_writer import ArrowWriter, OptimizedTypedSequence
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_writer.py", line 27, in <module>
from .features import Features, Image, Value
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/__init__.py", line 17, in <module>
from .audio import Audio
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/audio.py", line 12, in <module>
from ..download.streaming_download_manager import xopen
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/__init__.py", line 9, in <module>
from .download_manager import DownloadManager, DownloadMode
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/download_manager.py", line 36, in <module>
from ..utils.py_utils import NestedDataStructure, map_nested, size_str
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 602, in <module>
class Pickler(dill.Pickler):
File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 605, in Pickler
dispatch = dill._dill.MetaCatchingDict(dill.Pickler.dispatch.copy())
AttributeError: module 'dill' has no attribute '_dill'
```
Looking at the github source code for dill, it appears that `datasets` has a bug or is not compatible with the latest `dill`. Specifically, rather than `dill._dill.XXXX` it should be `dill.dill._dill.XXXX`. But given the popularity of `datasets` I feel confused about me being the first person to have this issue, so it makes me wonder if I'm misdiagnosing the issue.
### Steps to reproduce the bug
Install `dill` and `datasets` packages and then `import datasets`
### Expected behavior
I expect `datasets` to import.
### Environment info
- `datasets` version: 2.9.0
- Platform: macOS-10.16-x86_64-i386-64bit
- Python version: 3.9.13
- PyArrow version: 11.0.0
- Pandas version: 1.4.4
As I said above, I guess this is not a problem with `datasets`. I think you have different Python environments: one with the new dill version (the one you get while using pip) and other with the old dill version (the one where you get the AttributeError).
You should update `dill` in the Python environment you are using within spyder.
Please note that the `_dill` module is present in the `dill` package since their 2.8.0 version. | [
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https://github.com/huggingface/datasets/issues/5486 | Adding `sep` to TextConfig | Hi @omar-araboghli, thanks for your proposal.
Have you tried to use "csv" loader instead of "text"? That already has a `sep` argument. | I have a local a `.txt` file that follows the `CONLL2003` format which I need to load using `load_script`. However, by using `sample_by='line'`, one can only split the dataset into lines without splitting each line into columns. Would it be reasonable to add a `sep` argument in combination with `sample_by='paragraph'` to parse a paragraph into an array for each column ? If so, I am happy to contribute!
## Environment
* `python 3.8.10`
* `datasets 2.9.0`
## Snippet of `train.txt`
```txt
Distribution NN O O
and NN O O
dynamics NN O O
of NN O O
electron NN O B-RP
complexes NN O I-RP
in NN O O
cyanobacterial NN O B-R
membranes NN O I-R
The NN O O
occurrence NN O O
of NN O O
prostaglandin NN O B-R
F2α NN O I-R
in NN O O
Pharbitis NN O B-R
seedlings NN O I-R
grown NN O O
under NN O O
short NN O B-P
days NN O I-P
or NN O I-P
days NN O I-P
```
## Current Behaviour
```python
# defining 4 features ['tokens', 'pos_tags', 'chunk_tags', 'ner_tags'] here would fail with `ValueError: Length of names (4) does not match length of arrays (1)`
dataset = datasets.load_dataset(path='text', features=features, data_files={'train': 'train.txt'}, sample_by='line')
dataset['train']['tokens'][0]
>>> 'Distribution\tNN\tO\tO'
```
## Expected Behaviour / Suggestion
```python
# suppose we defined 4 features ['tokens', 'pos_tags', 'chunk_tags', 'ner_tags']
dataset = datasets.load_dataset(path='text', features=features, data_files={'train': 'train.txt'}, sample_by='paragraph', sep='\t')
dataset['train']['tokens'][0]
>>> ['Distribution', 'and', 'dynamics', ... ]
dataset['train']['ner_tags'][0]
>>> ['O', 'O', 'O', ... ]
``` | 318 | 22 | Adding `sep` to TextConfig
I have a local a `.txt` file that follows the `CONLL2003` format which I need to load using `load_script`. However, by using `sample_by='line'`, one can only split the dataset into lines without splitting each line into columns. Would it be reasonable to add a `sep` argument in combination with `sample_by='paragraph'` to parse a paragraph into an array for each column ? If so, I am happy to contribute!
## Environment
* `python 3.8.10`
* `datasets 2.9.0`
## Snippet of `train.txt`
```txt
Distribution NN O O
and NN O O
dynamics NN O O
of NN O O
electron NN O B-RP
complexes NN O I-RP
in NN O O
cyanobacterial NN O B-R
membranes NN O I-R
The NN O O
occurrence NN O O
of NN O O
prostaglandin NN O B-R
F2α NN O I-R
in NN O O
Pharbitis NN O B-R
seedlings NN O I-R
grown NN O O
under NN O O
short NN O B-P
days NN O I-P
or NN O I-P
days NN O I-P
```
## Current Behaviour
```python
# defining 4 features ['tokens', 'pos_tags', 'chunk_tags', 'ner_tags'] here would fail with `ValueError: Length of names (4) does not match length of arrays (1)`
dataset = datasets.load_dataset(path='text', features=features, data_files={'train': 'train.txt'}, sample_by='line')
dataset['train']['tokens'][0]
>>> 'Distribution\tNN\tO\tO'
```
## Expected Behaviour / Suggestion
```python
# suppose we defined 4 features ['tokens', 'pos_tags', 'chunk_tags', 'ner_tags']
dataset = datasets.load_dataset(path='text', features=features, data_files={'train': 'train.txt'}, sample_by='paragraph', sep='\t')
dataset['train']['tokens'][0]
>>> ['Distribution', 'and', 'dynamics', ... ]
dataset['train']['ner_tags'][0]
>>> ['O', 'O', 'O', ... ]
```
Hi @omar-araboghli, thanks for your proposal.
Have you tried to use "csv" loader instead of "text"? That already has a `sep` argument. | [
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https://github.com/huggingface/datasets/issues/5486 | Adding `sep` to TextConfig | Hi @albertvillanova, thanks for the quick response!
Indeed, I have been trying to use `csv` instead of `text`. However I am still not able to define range of rows as one sequence, that is achievable with passing `sample_by='paragraph'` to the `TextConfig`
For instance, the below code
```python
import datasets
dataset = datasets.load_dataset(
path='csv',
data_files={'train': TRAINING_SET_PATH},
sep='\t',
header=None,
column_names=['tokens', 'pos_tags', 'chunk_tags', 'ner_tags']
)
```
leads to
```python
dataset
>>> DatasetDict({
train: Dataset({
features: ['tokens', 'pos_tags', 'chunk_tags', 'ner_tags'],
num_rows: 62543
})
})
dataset['train'][0]
>>> {'tokens': 'Distribution',
'pos_tags': 'NN',
'chunk_tags': 'O',
'ner_tags': 'O'
}
```
Is there a way to deal with multiple csv rows as one dataset instance, where each column is a sequence of those rows ? | I have a local a `.txt` file that follows the `CONLL2003` format which I need to load using `load_script`. However, by using `sample_by='line'`, one can only split the dataset into lines without splitting each line into columns. Would it be reasonable to add a `sep` argument in combination with `sample_by='paragraph'` to parse a paragraph into an array for each column ? If so, I am happy to contribute!
## Environment
* `python 3.8.10`
* `datasets 2.9.0`
## Snippet of `train.txt`
```txt
Distribution NN O O
and NN O O
dynamics NN O O
of NN O O
electron NN O B-RP
complexes NN O I-RP
in NN O O
cyanobacterial NN O B-R
membranes NN O I-R
The NN O O
occurrence NN O O
of NN O O
prostaglandin NN O B-R
F2α NN O I-R
in NN O O
Pharbitis NN O B-R
seedlings NN O I-R
grown NN O O
under NN O O
short NN O B-P
days NN O I-P
or NN O I-P
days NN O I-P
```
## Current Behaviour
```python
# defining 4 features ['tokens', 'pos_tags', 'chunk_tags', 'ner_tags'] here would fail with `ValueError: Length of names (4) does not match length of arrays (1)`
dataset = datasets.load_dataset(path='text', features=features, data_files={'train': 'train.txt'}, sample_by='line')
dataset['train']['tokens'][0]
>>> 'Distribution\tNN\tO\tO'
```
## Expected Behaviour / Suggestion
```python
# suppose we defined 4 features ['tokens', 'pos_tags', 'chunk_tags', 'ner_tags']
dataset = datasets.load_dataset(path='text', features=features, data_files={'train': 'train.txt'}, sample_by='paragraph', sep='\t')
dataset['train']['tokens'][0]
>>> ['Distribution', 'and', 'dynamics', ... ]
dataset['train']['ner_tags'][0]
>>> ['O', 'O', 'O', ... ]
``` | 318 | 116 | Adding `sep` to TextConfig
I have a local a `.txt` file that follows the `CONLL2003` format which I need to load using `load_script`. However, by using `sample_by='line'`, one can only split the dataset into lines without splitting each line into columns. Would it be reasonable to add a `sep` argument in combination with `sample_by='paragraph'` to parse a paragraph into an array for each column ? If so, I am happy to contribute!
## Environment
* `python 3.8.10`
* `datasets 2.9.0`
## Snippet of `train.txt`
```txt
Distribution NN O O
and NN O O
dynamics NN O O
of NN O O
electron NN O B-RP
complexes NN O I-RP
in NN O O
cyanobacterial NN O B-R
membranes NN O I-R
The NN O O
occurrence NN O O
of NN O O
prostaglandin NN O B-R
F2α NN O I-R
in NN O O
Pharbitis NN O B-R
seedlings NN O I-R
grown NN O O
under NN O O
short NN O B-P
days NN O I-P
or NN O I-P
days NN O I-P
```
## Current Behaviour
```python
# defining 4 features ['tokens', 'pos_tags', 'chunk_tags', 'ner_tags'] here would fail with `ValueError: Length of names (4) does not match length of arrays (1)`
dataset = datasets.load_dataset(path='text', features=features, data_files={'train': 'train.txt'}, sample_by='line')
dataset['train']['tokens'][0]
>>> 'Distribution\tNN\tO\tO'
```
## Expected Behaviour / Suggestion
```python
# suppose we defined 4 features ['tokens', 'pos_tags', 'chunk_tags', 'ner_tags']
dataset = datasets.load_dataset(path='text', features=features, data_files={'train': 'train.txt'}, sample_by='paragraph', sep='\t')
dataset['train']['tokens'][0]
>>> ['Distribution', 'and', 'dynamics', ... ]
dataset['train']['ner_tags'][0]
>>> ['O', 'O', 'O', ... ]
```
Hi @albertvillanova, thanks for the quick response!
Indeed, I have been trying to use `csv` instead of `text`. However I am still not able to define range of rows as one sequence, that is achievable with passing `sample_by='paragraph'` to the `TextConfig`
For instance, the below code
```python
import datasets
dataset = datasets.load_dataset(
path='csv',
data_files={'train': TRAINING_SET_PATH},
sep='\t',
header=None,
column_names=['tokens', 'pos_tags', 'chunk_tags', 'ner_tags']
)
```
leads to
```python
dataset
>>> DatasetDict({
train: Dataset({
features: ['tokens', 'pos_tags', 'chunk_tags', 'ner_tags'],
num_rows: 62543
})
})
dataset['train'][0]
>>> {'tokens': 'Distribution',
'pos_tags': 'NN',
'chunk_tags': 'O',
'ner_tags': 'O'
}
```
Is there a way to deal with multiple csv rows as one dataset instance, where each column is a sequence of those rows ? | [
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https://github.com/huggingface/datasets/issues/5482 | Reload features from Parquet metadata | I'd be happy to have a look, if nobody else has started working on this yet @lhoestq.
It seems to me that for the `arrow` format features are currently attached as metadata [in `datasets.arrow_writer`](https://github.com/huggingface/datasets/blob/5f810b7011a8a4ab077a1847c024d2d9e267b065/src/datasets/arrow_writer.py#L412) and retrieved from the metadata at `load_dataset` time using [`datasets.features.features.from_arrow_schema`](https://github.com/huggingface/datasets/blob/5f810b7011a8a4ab077a1847c024d2d9e267b065/src/datasets/features/features.py#L1602).
This will need to be replicated for `parquet` via calls to [this api](https://arrow.apache.org/docs/python/generated/pyarrow.parquet.write_metadata.html) from `io.parquet.ParquetWriter` and `io.parquet.ParquetReader` [respectively](https://github.com/huggingface/datasets/blob/5f810b7011a8a4ab077a1847c024d2d9e267b065/src/datasets/io/parquet.py#L104).
Any other important considerations?
| The idea would be to allow this :
```python
ds.to_parquet("my_dataset/ds.parquet")
reloaded = load_dataset("my_dataset")
assert ds.features == reloaded.features
```
And it should also work with Image and Audio types (right now they're reloaded as a dict type)
This can be implemented by storing and reading the feature types in the parquet metadata, as we do for arrow files. | 320 | 66 | Reload features from Parquet metadata
The idea would be to allow this :
```python
ds.to_parquet("my_dataset/ds.parquet")
reloaded = load_dataset("my_dataset")
assert ds.features == reloaded.features
```
And it should also work with Image and Audio types (right now they're reloaded as a dict type)
This can be implemented by storing and reading the feature types in the parquet metadata, as we do for arrow files.
I'd be happy to have a look, if nobody else has started working on this yet @lhoestq.
It seems to me that for the `arrow` format features are currently attached as metadata [in `datasets.arrow_writer`](https://github.com/huggingface/datasets/blob/5f810b7011a8a4ab077a1847c024d2d9e267b065/src/datasets/arrow_writer.py#L412) and retrieved from the metadata at `load_dataset` time using [`datasets.features.features.from_arrow_schema`](https://github.com/huggingface/datasets/blob/5f810b7011a8a4ab077a1847c024d2d9e267b065/src/datasets/features/features.py#L1602).
This will need to be replicated for `parquet` via calls to [this api](https://arrow.apache.org/docs/python/generated/pyarrow.parquet.write_metadata.html) from `io.parquet.ParquetWriter` and `io.parquet.ParquetReader` [respectively](https://github.com/huggingface/datasets/blob/5f810b7011a8a4ab077a1847c024d2d9e267b065/src/datasets/io/parquet.py#L104).
Any other important considerations?
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https://github.com/huggingface/datasets/issues/5482 | Reload features from Parquet metadata | Thanks @MFreidank ! That's correct :)
Reading the metadata to infer the features can be ideally done in the `parquet.py` file in `packaged_builder` when a parquet file is read. You can cast the arrow table to the schema you get from the features.arrow_schema | The idea would be to allow this :
```python
ds.to_parquet("my_dataset/ds.parquet")
reloaded = load_dataset("my_dataset")
assert ds.features == reloaded.features
```
And it should also work with Image and Audio types (right now they're reloaded as a dict type)
This can be implemented by storing and reading the feature types in the parquet metadata, as we do for arrow files. | 320 | 43 | Reload features from Parquet metadata
The idea would be to allow this :
```python
ds.to_parquet("my_dataset/ds.parquet")
reloaded = load_dataset("my_dataset")
assert ds.features == reloaded.features
```
And it should also work with Image and Audio types (right now they're reloaded as a dict type)
This can be implemented by storing and reading the feature types in the parquet metadata, as we do for arrow files.
Thanks @MFreidank ! That's correct :)
Reading the metadata to infer the features can be ideally done in the `parquet.py` file in `packaged_builder` when a parquet file is read. You can cast the arrow table to the schema you get from the features.arrow_schema | [
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https://github.com/huggingface/datasets/issues/5481 | Load a cached dataset as iterable | Hi ! Sure :) you can comment `#self-assign` to assign yourself to this issue.
I can give you some pointers to get started:
`load_dataset` works roughly this way:
1. it instantiate a dataset builder using `load_dataset_builder()`
2. the builder download and prepare the dataset as Arrow files in the cache using `download_and_prepare()`
3. the builder returns a Dataset object with `as_dataset()`
One way to approach this would be to implement `as_iterable_dataset()` in `builder.py`.
And similarly to `as_dataset()`, you can use the `ArrowReader`. It has a `get_file_instructions()` method that can be helpful. It gives you the files to read as list of dictionaries with those keys: `filename`, `skip` and `take`.
The `skip` and `take` arguments are used in case the user wants to load a subset of the dataset, e.g.
```python
load_dataset(..., split="train[:10]")
```
Let me know if you have questions or if I can help :) | The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True | 321 | 146 | Load a cached dataset as iterable
The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True
Hi ! Sure :) you can comment `#self-assign` to assign yourself to this issue.
I can give you some pointers to get started:
`load_dataset` works roughly this way:
1. it instantiate a dataset builder using `load_dataset_builder()`
2. the builder download and prepare the dataset as Arrow files in the cache using `download_and_prepare()`
3. the builder returns a Dataset object with `as_dataset()`
One way to approach this would be to implement `as_iterable_dataset()` in `builder.py`.
And similarly to `as_dataset()`, you can use the `ArrowReader`. It has a `get_file_instructions()` method that can be helpful. It gives you the files to read as list of dictionaries with those keys: `filename`, `skip` and `take`.
The `skip` and `take` arguments are used in case the user wants to load a subset of the dataset, e.g.
```python
load_dataset(..., split="train[:10]")
```
Let me know if you have questions or if I can help :) | [
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] |
https://github.com/huggingface/datasets/issues/5481 | Load a cached dataset as iterable | This use-case is a bit specific, and `load_dataset` already has enough parameters (plus, `streaming=True` also returns an iterable dataset, so we would have to explain the difference), so I think it would be better to add `IterableDataset.from_file` to the API (more flexible and aligned with the goal from https://github.com/huggingface/datasets/issues/3444) instead. | The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True | 321 | 50 | Load a cached dataset as iterable
The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True
This use-case is a bit specific, and `load_dataset` already has enough parameters (plus, `streaming=True` also returns an iterable dataset, so we would have to explain the difference), so I think it would be better to add `IterableDataset.from_file` to the API (more flexible and aligned with the goal from https://github.com/huggingface/datasets/issues/3444) instead. | [
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-2.1212551593780518
] |
https://github.com/huggingface/datasets/issues/5481 | Load a cached dataset as iterable | > This use-case is a bit specific
This allows to use `datasets` for large scale training where map-style datasets are too slow and use too much memory in PyTorch. So I would still consider adding it.
Alternatively we could add this feature one level bellow:
```python
builder = load_dataset_builder(...)
builder.download_and_prepare()
ids = builder.as_iterable_dataset()
``` | The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True | 321 | 54 | Load a cached dataset as iterable
The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True
> This use-case is a bit specific
This allows to use `datasets` for large scale training where map-style datasets are too slow and use too much memory in PyTorch. So I would still consider adding it.
Alternatively we could add this feature one level bellow:
```python
builder = load_dataset_builder(...)
builder.download_and_prepare()
ids = builder.as_iterable_dataset()
``` | [
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https://github.com/huggingface/datasets/issues/5481 | Load a cached dataset as iterable | Yes, I see how this can be useful. Still, I think `Dataset.to_iterable` + `IterableDataset.from_file` would be much cleaner in terms of the API design (and more flexible since `load_dataset` can only access the "initial" (unprocessed) version of a dataset).
And since it can be tricky to manually find the "initial" version of a dataset in the cache, maybe `load_dataset` could return an iterable dataset streamed from the cache if `streaming=True` and the cache is up-to-date. | The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True | 321 | 75 | Load a cached dataset as iterable
The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True
Yes, I see how this can be useful. Still, I think `Dataset.to_iterable` + `IterableDataset.from_file` would be much cleaner in terms of the API design (and more flexible since `load_dataset` can only access the "initial" (unprocessed) version of a dataset).
And since it can be tricky to manually find the "initial" version of a dataset in the cache, maybe `load_dataset` could return an iterable dataset streamed from the cache if `streaming=True` and the cache is up-to-date. | [
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https://github.com/huggingface/datasets/issues/5481 | Load a cached dataset as iterable | > This allows to use datasets for large scale training where map-style datasets are too slow and use too much memory in PyTorch.
I second that. e.g. In my last experiment Oscar-en uses 16GB RSS RAM per process and when using multiple processes the host quickly runs out cpu memory. | The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True | 321 | 50 | Load a cached dataset as iterable
The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True
> This allows to use datasets for large scale training where map-style datasets are too slow and use too much memory in PyTorch.
I second that. e.g. In my last experiment Oscar-en uses 16GB RSS RAM per process and when using multiple processes the host quickly runs out cpu memory. | [
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] |
https://github.com/huggingface/datasets/issues/5481 | Load a cached dataset as iterable | >And since it can be tricky to manually find the "initial" version of a dataset in the cache, maybe load_dataset could return an iterable dataset streamed from the cache if streaming=True and the cache is up-to-date.
This is exactly the need on JeanZay (HPC) - I have the dataset cache ready, but the compute node is offline, so making streaming work off a local cache would address that need.
If you will have a working POC I can be the tester. | The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True | 321 | 81 | Load a cached dataset as iterable
The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True
>And since it can be tricky to manually find the "initial" version of a dataset in the cache, maybe load_dataset could return an iterable dataset streamed from the cache if streaming=True and the cache is up-to-date.
This is exactly the need on JeanZay (HPC) - I have the dataset cache ready, but the compute node is offline, so making streaming work off a local cache would address that need.
If you will have a working POC I can be the tester. | [
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https://github.com/huggingface/datasets/issues/5481 | Load a cached dataset as iterable | > Yes, I see how this can be useful. Still, I think Dataset.to_iterable + IterableDataset.from_file would be much cleaner in terms of the API design (and more flexible since load_dataset can only access the "initial" (unprocessed) version of a dataset).
I like `IterableDataset.from_file` as well. On the other hand `Dataset.to_iterable` first requires to load a Dataset object, which can take time depending on your hardware and your dataset size (sometimes 1h+).
> And since it can be tricky to manually find the "initial" version of a dataset in the cache, maybe load_dataset could return an iterable dataset streamed from the cache if streaming=True and the cache is up-to-date.
That would definitely do the job. I was suggesting a different parameter just to make explicit the difference between
- streaming from the raw data
- streaming from the local cache
But I'd be fine with streaming from cache is the cache is up-to-date since it's always faster. We could log a message as usual to make it explicit that the cache is used | The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True | 321 | 172 | Load a cached dataset as iterable
The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True
> Yes, I see how this can be useful. Still, I think Dataset.to_iterable + IterableDataset.from_file would be much cleaner in terms of the API design (and more flexible since load_dataset can only access the "initial" (unprocessed) version of a dataset).
I like `IterableDataset.from_file` as well. On the other hand `Dataset.to_iterable` first requires to load a Dataset object, which can take time depending on your hardware and your dataset size (sometimes 1h+).
> And since it can be tricky to manually find the "initial" version of a dataset in the cache, maybe load_dataset could return an iterable dataset streamed from the cache if streaming=True and the cache is up-to-date.
That would definitely do the job. I was suggesting a different parameter just to make explicit the difference between
- streaming from the raw data
- streaming from the local cache
But I'd be fine with streaming from cache is the cache is up-to-date since it's always faster. We could log a message as usual to make it explicit that the cache is used | [
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https://github.com/huggingface/datasets/issues/5481 | Load a cached dataset as iterable | > I was suggesting a different parameter just to make explicit the difference between
MosaicML's `streaming` library does the same (tries to stream from the local cache if possible), so logging a message should be explicit enough :). | The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True | 321 | 38 | Load a cached dataset as iterable
The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True
> I was suggesting a different parameter just to make explicit the difference between
MosaicML's `streaming` library does the same (tries to stream from the local cache if possible), so logging a message should be explicit enough :). | [
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https://github.com/huggingface/datasets/issues/5481 | Load a cached dataset as iterable | Hi Both! It has been a while since my first issue so I am gonna go for this one ! #self-assign | The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True | 321 | 21 | Load a cached dataset as iterable
The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True
Hi Both! It has been a while since my first issue so I am gonna go for this one ! #self-assign | [
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https://github.com/huggingface/datasets/issues/5481 | Load a cached dataset as iterable | https://github.com/huggingface/datasets/pull/5821 should be helpful to implement `IterableDataset.from_file`, since it defines a new ArrowExamplesIterable that takes an Arrow tables generator function (e.g. from a file) and can be used in an IterableDataset | The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True | 321 | 31 | Load a cached dataset as iterable
The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True
https://github.com/huggingface/datasets/pull/5821 should be helpful to implement `IterableDataset.from_file`, since it defines a new ArrowExamplesIterable that takes an Arrow tables generator function (e.g. from a file) and can be used in an IterableDataset | [
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https://github.com/huggingface/datasets/issues/5481 | Load a cached dataset as iterable | So what's recommanded usage of `IterableDataset.from_file` and `load_dataset`? How about I have multiple arrow files and `load_dataset` is often convenient to handle that. | The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True | 321 | 23 | Load a cached dataset as iterable
The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True
So what's recommanded usage of `IterableDataset.from_file` and `load_dataset`? How about I have multiple arrow files and `load_dataset` is often convenient to handle that. | [
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] |
https://github.com/huggingface/datasets/issues/5481 | Load a cached dataset as iterable | If you have multiple Arrow files you can load them using
```python
from datasets import load_dataset
data_files = {"train": ["path/to/0.arrow", "path/to/1.arrow", ..., "path/to/n.arrow"]}
ds = load_dataset("arrow", data_files=data_files, streaming=True)
```
This is equivalent to calling `IterableDataset.from_file` and `concatenate_datasets`. | The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True | 321 | 37 | Load a cached dataset as iterable
The idea would be to allow something like
```python
ds = load_dataset("c4", "en", as_iterable=True)
```
To be used to train models. It would load an IterableDataset from the cached Arrow files.
Cc @stas00
Edit : from the discussions we may load from cache when streaming=True
If you have multiple Arrow files you can load them using
```python
from datasets import load_dataset
data_files = {"train": ["path/to/0.arrow", "path/to/1.arrow", ..., "path/to/n.arrow"]}
ds = load_dataset("arrow", data_files=data_files, streaming=True)
```
This is equivalent to calling `IterableDataset.from_file` and `concatenate_datasets`. | [
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https://github.com/huggingface/datasets/issues/5477 | Unpin sqlalchemy once issue is fixed | @albertvillanova It looks like that issue has been fixed so I made a PR to unpin sqlalchemy! | Once the source issue is fixed:
- pandas-dev/pandas#51015
we should revert the pin introduced in:
- #5476 | 322 | 17 | Unpin sqlalchemy once issue is fixed
Once the source issue is fixed:
- pandas-dev/pandas#51015
we should revert the pin introduced in:
- #5476
@albertvillanova It looks like that issue has been fixed so I made a PR to unpin sqlalchemy! | [
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] |
https://github.com/huggingface/datasets/issues/5477 | Unpin sqlalchemy once issue is fixed | The source issue:
- https://github.com/pandas-dev/pandas/issues/40686
has been fixed:
- https://github.com/pandas-dev/pandas/pull/48576
The fix was released yesterday (2023-04-03) only in `pandas-2.0.0`:
- https://github.com/pandas-dev/pandas/releases/tag/v2.0.0
but it will not be back-ported to `pandas-1`:
- https://github.com/pandas-dev/pandas/pull/48576#issuecomment-1466467159
Also note that `pandas-2.0.0` dropped support for Python 3.7:
- https://github.com/pandas-dev/pandas/issues/41678
- https://github.com/pandas-dev/pandas/pull/41989
Therefore, we cannot unpin `sqlalchemy` until we drop support for Python 3.7 (these Python users cannot use `pandas-2`). | Once the source issue is fixed:
- pandas-dev/pandas#51015
we should revert the pin introduced in:
- #5476 | 322 | 62 | Unpin sqlalchemy once issue is fixed
Once the source issue is fixed:
- pandas-dev/pandas#51015
we should revert the pin introduced in:
- #5476
The source issue:
- https://github.com/pandas-dev/pandas/issues/40686
has been fixed:
- https://github.com/pandas-dev/pandas/pull/48576
The fix was released yesterday (2023-04-03) only in `pandas-2.0.0`:
- https://github.com/pandas-dev/pandas/releases/tag/v2.0.0
but it will not be back-ported to `pandas-1`:
- https://github.com/pandas-dev/pandas/pull/48576#issuecomment-1466467159
Also note that `pandas-2.0.0` dropped support for Python 3.7:
- https://github.com/pandas-dev/pandas/issues/41678
- https://github.com/pandas-dev/pandas/pull/41989
Therefore, we cannot unpin `sqlalchemy` until we drop support for Python 3.7 (these Python users cannot use `pandas-2`). | [
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https://github.com/huggingface/datasets/issues/5475 | Dataset scan time is much slower than using native arrow | Hi ! In your code you only iterate on the Arrow buffers - you don't actually load the data as python objects. For a fair comparison, you can modify your code using:
```diff
- for _ in range(0, len(table), bsz):
- _ = {k:table[k][_ : _ + bsz] for k in cols}
+ for _ in range(0, len(table), bsz):
+ _ = {k:table[k][_ : _ + bsz].to_pylist() for k in cols}
```
I re-ran your code and got a speed ratio of 1.00x and 1.02x | ### Describe the bug
I'm basically running the same scanning experiment from the tutorials https://huggingface.co/course/chapter5/4?fw=pt except now I'm comparing to a native pyarrow version.
I'm finding that the native pyarrow approach is much faster (2 orders of magnitude). Is there something I'm missing that explains this phenomenon?
### Steps to reproduce the bug
https://colab.research.google.com/drive/11EtHDaGAf1DKCpvYnAPJUW-LFfAcDzHY?usp=sharing
### Expected behavior
I expect scan times to be on par with using pyarrow directly.
### Environment info
standard colab environment | 323 | 85 | Dataset scan time is much slower than using native arrow
### Describe the bug
I'm basically running the same scanning experiment from the tutorials https://huggingface.co/course/chapter5/4?fw=pt except now I'm comparing to a native pyarrow version.
I'm finding that the native pyarrow approach is much faster (2 orders of magnitude). Is there something I'm missing that explains this phenomenon?
### Steps to reproduce the bug
https://colab.research.google.com/drive/11EtHDaGAf1DKCpvYnAPJUW-LFfAcDzHY?usp=sharing
### Expected behavior
I expect scan times to be on par with using pyarrow directly.
### Environment info
standard colab environment
Hi ! In your code you only iterate on the Arrow buffers - you don't actually load the data as python objects. For a fair comparison, you can modify your code using:
```diff
- for _ in range(0, len(table), bsz):
- _ = {k:table[k][_ : _ + bsz] for k in cols}
+ for _ in range(0, len(table), bsz):
+ _ = {k:table[k][_ : _ + bsz].to_pylist() for k in cols}
```
I re-ran your code and got a speed ratio of 1.00x and 1.02x | [
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https://github.com/huggingface/datasets/issues/5475 | Dataset scan time is much slower than using native arrow | Ah I see, datasets is implicitly making this conversion. Thanks for pointing that out!
If it's not too much, I would also suggest updating some of your docs with the same `.to_pylist()` conversion in the code snippet that follows [here](https://huggingface.co/course/chapter5/4?fw=pt#:~:text=let%E2%80%99s%20run%20a%20little%20speed%20test%20by%20iterating%20over%20all%20the%20elements%20in%20the%20PubMed%20Abstracts%20dataset%3A). | ### Describe the bug
I'm basically running the same scanning experiment from the tutorials https://huggingface.co/course/chapter5/4?fw=pt except now I'm comparing to a native pyarrow version.
I'm finding that the native pyarrow approach is much faster (2 orders of magnitude). Is there something I'm missing that explains this phenomenon?
### Steps to reproduce the bug
https://colab.research.google.com/drive/11EtHDaGAf1DKCpvYnAPJUW-LFfAcDzHY?usp=sharing
### Expected behavior
I expect scan times to be on par with using pyarrow directly.
### Environment info
standard colab environment | 323 | 40 | Dataset scan time is much slower than using native arrow
### Describe the bug
I'm basically running the same scanning experiment from the tutorials https://huggingface.co/course/chapter5/4?fw=pt except now I'm comparing to a native pyarrow version.
I'm finding that the native pyarrow approach is much faster (2 orders of magnitude). Is there something I'm missing that explains this phenomenon?
### Steps to reproduce the bug
https://colab.research.google.com/drive/11EtHDaGAf1DKCpvYnAPJUW-LFfAcDzHY?usp=sharing
### Expected behavior
I expect scan times to be on par with using pyarrow directly.
### Environment info
standard colab environment
Ah I see, datasets is implicitly making this conversion. Thanks for pointing that out!
If it's not too much, I would also suggest updating some of your docs with the same `.to_pylist()` conversion in the code snippet that follows [here](https://huggingface.co/course/chapter5/4?fw=pt#:~:text=let%E2%80%99s%20run%20a%20little%20speed%20test%20by%20iterating%20over%20all%20the%20elements%20in%20the%20PubMed%20Abstracts%20dataset%3A). | [
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https://github.com/huggingface/datasets/issues/5475 | Dataset scan time is much slower than using native arrow | This code snippet shows `datasets` code that reads the Arrow data as python objects already, there is no need to add to_pylist. Or were you thinking about something else ? | ### Describe the bug
I'm basically running the same scanning experiment from the tutorials https://huggingface.co/course/chapter5/4?fw=pt except now I'm comparing to a native pyarrow version.
I'm finding that the native pyarrow approach is much faster (2 orders of magnitude). Is there something I'm missing that explains this phenomenon?
### Steps to reproduce the bug
https://colab.research.google.com/drive/11EtHDaGAf1DKCpvYnAPJUW-LFfAcDzHY?usp=sharing
### Expected behavior
I expect scan times to be on par with using pyarrow directly.
### Environment info
standard colab environment | 323 | 30 | Dataset scan time is much slower than using native arrow
### Describe the bug
I'm basically running the same scanning experiment from the tutorials https://huggingface.co/course/chapter5/4?fw=pt except now I'm comparing to a native pyarrow version.
I'm finding that the native pyarrow approach is much faster (2 orders of magnitude). Is there something I'm missing that explains this phenomenon?
### Steps to reproduce the bug
https://colab.research.google.com/drive/11EtHDaGAf1DKCpvYnAPJUW-LFfAcDzHY?usp=sharing
### Expected behavior
I expect scan times to be on par with using pyarrow directly.
### Environment info
standard colab environment
This code snippet shows `datasets` code that reads the Arrow data as python objects already, there is no need to add to_pylist. Or were you thinking about something else ? | [
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https://github.com/huggingface/datasets/issues/5474 | Column project operation on `datasets.Dataset` | Hi ! This would be a nice addition indeed :) This sounds like a duplicate of https://github.com/huggingface/datasets/issues/5468
> Not sure. Some of my PRs are still open and some do not have any discussions.
Sorry to hear that, feel free to ping me on those PRs | ### Feature request
There is no operation to select a subset of columns of original dataset. Expected API follows.
```python
a = Dataset.from_dict({
'int': [0, 1, 2]
'char': ['a', 'b', 'c'],
'none': [None] * 3,
})
b = a.project('int', 'char') # usually, .select()
print(a.column_names) # stdout: ['int', 'char', 'none']
print(b.column_names) # stdout: ['int', 'char']
```
Method project can easily accept not only column names (as a `str)` but univariant function applied to corresponding column as an example. Or keyword arguments can be used in order to rename columns in advance (see `pandas`, `pyspark`, `pyarrow`, and SQL)..
### Motivation
Projection is a typical operation in every data processing library. And it is a basic block of a well-known data manipulation language like SQL. Without this operation `datasets.Dataset` interface is not complete.
### Your contribution
Not sure. Some of my PRs are still open and some do not have any discussions. | 324 | 46 | Column project operation on `datasets.Dataset`
### Feature request
There is no operation to select a subset of columns of original dataset. Expected API follows.
```python
a = Dataset.from_dict({
'int': [0, 1, 2]
'char': ['a', 'b', 'c'],
'none': [None] * 3,
})
b = a.project('int', 'char') # usually, .select()
print(a.column_names) # stdout: ['int', 'char', 'none']
print(b.column_names) # stdout: ['int', 'char']
```
Method project can easily accept not only column names (as a `str)` but univariant function applied to corresponding column as an example. Or keyword arguments can be used in order to rename columns in advance (see `pandas`, `pyspark`, `pyarrow`, and SQL)..
### Motivation
Projection is a typical operation in every data processing library. And it is a basic block of a well-known data manipulation language like SQL. Without this operation `datasets.Dataset` interface is not complete.
### Your contribution
Not sure. Some of my PRs are still open and some do not have any discussions.
Hi ! This would be a nice addition indeed :) This sounds like a duplicate of https://github.com/huggingface/datasets/issues/5468
> Not sure. Some of my PRs are still open and some do not have any discussions.
Sorry to hear that, feel free to ping me on those PRs | [
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https://github.com/huggingface/datasets/issues/5468 | Allow opposite of remove_columns on Dataset and DatasetDict | Hi! I agree it would be nice to have a method like that. Instead of `keep_columns`, we can name it `select_columns` to be more aligned with PyArrow's naming convention (`pa.Table.select`). | ### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
- | 325 | 30 | Allow opposite of remove_columns on Dataset and DatasetDict
### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
-
Hi! I agree it would be nice to have a method like that. Instead of `keep_columns`, we can name it `select_columns` to be more aligned with PyArrow's naming convention (`pa.Table.select`). | [
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https://github.com/huggingface/datasets/issues/5468 | Allow opposite of remove_columns on Dataset and DatasetDict | Hi, I am a newbie to open source and would like to contribute. @mariosasko can I take up this issue ? | ### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
- | 325 | 21 | Allow opposite of remove_columns on Dataset and DatasetDict
### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
-
Hi, I am a newbie to open source and would like to contribute. @mariosasko can I take up this issue ? | [
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https://github.com/huggingface/datasets/issues/5468 | Allow opposite of remove_columns on Dataset and DatasetDict | Hey, I also want to work on this issue I am a newbie to open source. | ### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
- | 325 | 16 | Allow opposite of remove_columns on Dataset and DatasetDict
### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
-
Hey, I also want to work on this issue I am a newbie to open source. | [
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https://github.com/huggingface/datasets/issues/5468 | Allow opposite of remove_columns on Dataset and DatasetDict | This sounds related to https://github.com/huggingface/datasets/issues/5474
I'm fine with `select_columns`, or we could also override `select` to also accept a list of columns maybe ? | ### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
- | 325 | 24 | Allow opposite of remove_columns on Dataset and DatasetDict
### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
-
This sounds related to https://github.com/huggingface/datasets/issues/5474
I'm fine with `select_columns`, or we could also override `select` to also accept a list of columns maybe ? | [
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https://github.com/huggingface/datasets/issues/5468 | Allow opposite of remove_columns on Dataset and DatasetDict | @lhoestq, I am planning to add a member function to the dataset class to perform the selection operation. Do you think its the right way to proceed? or there is a better option ? | ### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
- | 325 | 34 | Allow opposite of remove_columns on Dataset and DatasetDict
### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
-
@lhoestq, I am planning to add a member function to the dataset class to perform the selection operation. Do you think its the right way to proceed? or there is a better option ? | [
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https://github.com/huggingface/datasets/issues/5468 | Allow opposite of remove_columns on Dataset and DatasetDict | Unless @mariosasko thinks otherwise, I think it can go in `Dataset.select()` :)
Though some parameters like keep_in_memory, indices_cache_file_name or writer_batch_size wouldn't when selecting columns, so we would need to update the docstring as well | ### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
- | 325 | 34 | Allow opposite of remove_columns on Dataset and DatasetDict
### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
-
Unless @mariosasko thinks otherwise, I think it can go in `Dataset.select()` :)
Though some parameters like keep_in_memory, indices_cache_file_name or writer_batch_size wouldn't when selecting columns, so we would need to update the docstring as well | [
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https://github.com/huggingface/datasets/issues/5468 | Allow opposite of remove_columns on Dataset and DatasetDict | If someone wants to give it a shot, feel free to comment `#self-assign` and it will assign the issue to you.
Feel free to ping us here if you have questions or if we can help :) | ### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
- | 325 | 37 | Allow opposite of remove_columns on Dataset and DatasetDict
### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
-
If someone wants to give it a shot, feel free to comment `#self-assign` and it will assign the issue to you.
Feel free to ping us here if you have questions or if we can help :) | [
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https://github.com/huggingface/datasets/issues/5468 | Allow opposite of remove_columns on Dataset and DatasetDict | I would rather have this functionality as a separate method. IMO it's always better to be explicit than to have an API where a single method can do different/uncorrelated things (somewhat reminds me of Pandas, and there is probably a good reason why PyArrow is more rigid in this aspect). | ### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
- | 325 | 50 | Allow opposite of remove_columns on Dataset and DatasetDict
### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
-
I would rather have this functionality as a separate method. IMO it's always better to be explicit than to have an API where a single method can do different/uncorrelated things (somewhat reminds me of Pandas, and there is probably a good reason why PyArrow is more rigid in this aspect). | [
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https://github.com/huggingface/datasets/issues/5468 | Allow opposite of remove_columns on Dataset and DatasetDict | In the end I also think it would be nice to have it as a separate method, this way we can also have it for `IterableDataset` (which can't have `select` for indices) | ### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
- | 325 | 32 | Allow opposite of remove_columns on Dataset and DatasetDict
### Feature request
In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code:
```python
COLUMNS_TO_KEEP = ["text", "audio"]
all_columns = gigaspeech["train"].column_names
columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP)
gigaspeech = gigaspeech.remove_columns(columns_to_remove)
```
This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write:
```python
gigaspeech = gigaspeech.keep_columns(["text", "audio"])
```
Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is.
### Motivation
Less code to write for the user of the dataset.
### Your contribution
-
In the end I also think it would be nice to have it as a separate method, this way we can also have it for `IterableDataset` (which can't have `select` for indices) | [
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https://github.com/huggingface/datasets/issues/5464 | NonMatchingChecksumError for hendrycks_test | Thanks for reporting, @sarahwie.
Please note this issue was already fixed in `datasets` 2.6.0 version:
- #5040
If you update your `datasets` version, you will be able to load the dataset:
```
pip install -U datasets
``` | ### Describe the bug
The checksum of the file has likely changed on the remote host.
### Steps to reproduce the bug
`dataset = nlp.load_dataset("hendrycks_test", "anatomy")`
### Expected behavior
no error thrown
### Environment info
- `datasets` version: 2.2.1
- Platform: macOS-13.1-arm64-arm-64bit
- Python version: 3.9.13
- PyArrow version: 9.0.0
- Pandas version: 1.5.1 | 326 | 37 | NonMatchingChecksumError for hendrycks_test
### Describe the bug
The checksum of the file has likely changed on the remote host.
### Steps to reproduce the bug
`dataset = nlp.load_dataset("hendrycks_test", "anatomy")`
### Expected behavior
no error thrown
### Environment info
- `datasets` version: 2.2.1
- Platform: macOS-13.1-arm64-arm-64bit
- Python version: 3.9.13
- PyArrow version: 9.0.0
- Pandas version: 1.5.1
Thanks for reporting, @sarahwie.
Please note this issue was already fixed in `datasets` 2.6.0 version:
- #5040
If you update your `datasets` version, you will be able to load the dataset:
```
pip install -U datasets
``` | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | Ccing @dwofk (the author of `fast-depth`).
Thanks, @awsaf49 for reporting this. I believe this is because the NYU Depth V2 shipped from `fast-depth` is already preprocessed.
If you think it might be better to have the NYU Depth V2 dataset from BTS [here](https://huggingface.co/datasets/sayakpaul/nyu_depth_v2) feel free to open a PR, I am happy to provide guidance :) | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 56 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
Ccing @dwofk (the author of `fast-depth`).
Thanks, @awsaf49 for reporting this. I believe this is because the NYU Depth V2 shipped from `fast-depth` is already preprocessed.
If you think it might be better to have the NYU Depth V2 dataset from BTS [here](https://huggingface.co/datasets/sayakpaul/nyu_depth_v2) feel free to open a PR, I am happy to provide guidance :) | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | Good catch ! Ideally it would be nice to have the datasets in the raw form, this way users can choose whatever processing they want to apply | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 27 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
Good catch ! Ideally it would be nice to have the datasets in the raw form, this way users can choose whatever processing they want to apply | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | > Ccing @dwofk (the author of `fast-depth`).
>
> Thanks, @awsaf49 for reporting this. I believe this is because the NYU Depth V2 shipped from `fast-depth` is already preprocessed.
>
> If you think it might be better to have the NYU Depth V2 dataset from BTS [here](https://huggingface.co/datasets/sayakpaul/nyu_depth_v2) feel free to open a PR, I am happy to provide guidance :)
@sayakpaul I would love to create a PR on this. As this will be my first PR here, some guidance would be helpful.
Need a bit of advice on the dataset, there are three publicly available datasets. Which one should I consider for PR?
1. [BTS](https://github.com/cleinc/bts): Containst train/test: 36K/654 data, dtype = `uint16` hence more precise
2. [DenseDepth](https://github.com/ialhashim/DenseDepth) It contains train/test: 50K/654 data, dtype = `uint8` hence less precise
3. [Official](https://cs.nyu.edu/~silberman/datasets/nyu_depth_v2.html#raw_parts): Size is big 400GB+, requires **MatLab** code for fixing **projection** and **sync**, DataType: `pgm` and `dump` hence can't be used directly.
cc: @lhoestq
| ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 155 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
> Ccing @dwofk (the author of `fast-depth`).
>
> Thanks, @awsaf49 for reporting this. I believe this is because the NYU Depth V2 shipped from `fast-depth` is already preprocessed.
>
> If you think it might be better to have the NYU Depth V2 dataset from BTS [here](https://huggingface.co/datasets/sayakpaul/nyu_depth_v2) feel free to open a PR, I am happy to provide guidance :)
@sayakpaul I would love to create a PR on this. As this will be my first PR here, some guidance would be helpful.
Need a bit of advice on the dataset, there are three publicly available datasets. Which one should I consider for PR?
1. [BTS](https://github.com/cleinc/bts): Containst train/test: 36K/654 data, dtype = `uint16` hence more precise
2. [DenseDepth](https://github.com/ialhashim/DenseDepth) It contains train/test: 50K/654 data, dtype = `uint8` hence less precise
3. [Official](https://cs.nyu.edu/~silberman/datasets/nyu_depth_v2.html#raw_parts): Size is big 400GB+, requires **MatLab** code for fixing **projection** and **sync**, DataType: `pgm` and `dump` hence can't be used directly.
cc: @lhoestq
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | I think BTS. Repositories like https://github.com/vinvino02/GLPDepth usually use BTS. Also, just for clarity, the PR will be to https://huggingface.co/datasets/sayakpaul/nyu_depth_v2. Once we have worked it out, we can update the following things:
* https://github.com/huggingface/blog/pull/718
* https://huggingface.co/docs/datasets/main/en/depth_estimation
Don't worry about it if it seems overwhelming. We will work it out together :)
@lhoestq what do you think? | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 55 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
I think BTS. Repositories like https://github.com/vinvino02/GLPDepth usually use BTS. Also, just for clarity, the PR will be to https://huggingface.co/datasets/sayakpaul/nyu_depth_v2. Once we have worked it out, we can update the following things:
* https://github.com/huggingface/blog/pull/718
* https://huggingface.co/docs/datasets/main/en/depth_estimation
Don't worry about it if it seems overwhelming. We will work it out together :)
@lhoestq what do you think? | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | @sayakpaul If I get this right I have to,
1. Create a PR on https://huggingface.co/datasets/sayakpaul/nyu_depth_v2
2. Create a PR on https://github.com/huggingface/blog
3. Create a PR on https://github.com/huggingface/datasets to update https://github.com/huggingface/datasets/blob/main/docs/source/depth_estimation.mdx | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 30 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
@sayakpaul If I get this right I have to,
1. Create a PR on https://huggingface.co/datasets/sayakpaul/nyu_depth_v2
2. Create a PR on https://github.com/huggingface/blog
3. Create a PR on https://github.com/huggingface/datasets to update https://github.com/huggingface/datasets/blob/main/docs/source/depth_estimation.mdx | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | Yup opening a PR to use BTS on https://huggingface.co/datasets/sayakpaul/nyu_depth_v2 sounds good :) Thanks for the help ! | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 17 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
Yup opening a PR to use BTS on https://huggingface.co/datasets/sayakpaul/nyu_depth_v2 sounds good :) Thanks for the help ! | [
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] |
https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | Finally, I have found the origin of the **discretized depth map**. When I first loaded the datasets from HF I noticed it was 30GB but in DenseDepth data is only 4GB with dtype=uint8. This means data from fast-depth (before loading to HF) must have high precision. So when I tried to dig deeper by directly loading depth_map from `h5py`, I found depth_map from `h5py` came with `float32`. But when the data is processed in HF with `datasets.Image()` it was directly converted to `uint8` from `float32` hence the **discretized** depth map.
https://github.com/huggingface/datasets/blob/c78559cacbb0ca6e0bc8bfc313cc0359f8c23ead/src/datasets/features/image.py#L91-L93
## Solutions:
#### 1. Array2D
Use `Array2D` feature with `float32` for depth_map
* Code:
```py
Features({'depth_map': Array2D(shape=(480, 640), dtype='float32')})
```
* Pros:
No precision loss.
* Cons:
As depth_map is saved as Array I think it can't be visuzlied in [hf.co/dataset](https://huggingface.co/datasets/sayakpaul/nyu_depth_v2) page like segmentation mask.
#### 2. Uint16
Use `uint16` as dtype for Image in `_h5_loader` for saving depth maps and accept `uint16` dtype in `datasets.Image()` feature.
* Code
```py
depth = np.array(h5f["depth"])
depth /= 10.0 # [0, max_depth] -> [0, 1]
depth *= (2**16 -1) # transform from [0, 1] -> [0, 2^16 - 1]
depth = depth.astype('uint16')
```
* Pros:
* We can visualize depth map in hf.co/datasets page like segmentation mask.
* No need for post-processing.
* Cons:
* We need to make two change
* Modify `_h5_loader` in https://huggingface.co/datasets/sayakpaul/nyu_depth_v2 to convert depth_map from `float32` to `uint16`.
* Make sure `datasets.Image()` converts `np.ndarray` to `uint16` checking max value
* Precision loss due to `float32` to `uint16`
* Post-processing required for depth_map to transform from `[0, 2^16 - 1]` to `[0, max_depth]` before feeding them to model. | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 270 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
Finally, I have found the origin of the **discretized depth map**. When I first loaded the datasets from HF I noticed it was 30GB but in DenseDepth data is only 4GB with dtype=uint8. This means data from fast-depth (before loading to HF) must have high precision. So when I tried to dig deeper by directly loading depth_map from `h5py`, I found depth_map from `h5py` came with `float32`. But when the data is processed in HF with `datasets.Image()` it was directly converted to `uint8` from `float32` hence the **discretized** depth map.
https://github.com/huggingface/datasets/blob/c78559cacbb0ca6e0bc8bfc313cc0359f8c23ead/src/datasets/features/image.py#L91-L93
## Solutions:
#### 1. Array2D
Use `Array2D` feature with `float32` for depth_map
* Code:
```py
Features({'depth_map': Array2D(shape=(480, 640), dtype='float32')})
```
* Pros:
No precision loss.
* Cons:
As depth_map is saved as Array I think it can't be visuzlied in [hf.co/dataset](https://huggingface.co/datasets/sayakpaul/nyu_depth_v2) page like segmentation mask.
#### 2. Uint16
Use `uint16` as dtype for Image in `_h5_loader` for saving depth maps and accept `uint16` dtype in `datasets.Image()` feature.
* Code
```py
depth = np.array(h5f["depth"])
depth /= 10.0 # [0, max_depth] -> [0, 1]
depth *= (2**16 -1) # transform from [0, 1] -> [0, 2^16 - 1]
depth = depth.astype('uint16')
```
* Pros:
* We can visualize depth map in hf.co/datasets page like segmentation mask.
* No need for post-processing.
* Cons:
* We need to make two change
* Modify `_h5_loader` in https://huggingface.co/datasets/sayakpaul/nyu_depth_v2 to convert depth_map from `float32` to `uint16`.
* Make sure `datasets.Image()` converts `np.ndarray` to `uint16` checking max value
* Precision loss due to `float32` to `uint16`
* Post-processing required for depth_map to transform from `[0, 2^16 - 1]` to `[0, max_depth]` before feeding them to model. | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | Thanks so much for digging into this.
Since the second solution entails changes to core datatypes in `datasets`, I think it's better to go with the first solution.
@lhoestq WDYT? | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 30 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
Thanks so much for digging into this.
Since the second solution entails changes to core datatypes in `datasets`, I think it's better to go with the first solution.
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | @sayakpaul Yes, Solution 1 requires minimal change and provides no precision loss. But I think support for `uint16` image would be a great addition as many datasets come with `uint16` image. For example [UW-Madison GI Tract Image Segmentation](https://www.kaggle.com/competitions/uw-madison-gi-tract-image-segmentation) dataset, here the image itself comes with `uint16` dtype rather than mask. So, saving `uint16` image with `uint8` will result in precision loss.
Perhaps we can adapt solution 1 for this issue and Add support for `uint16` image separately? | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 77 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
@sayakpaul Yes, Solution 1 requires minimal change and provides no precision loss. But I think support for `uint16` image would be a great addition as many datasets come with `uint16` image. For example [UW-Madison GI Tract Image Segmentation](https://www.kaggle.com/competitions/uw-madison-gi-tract-image-segmentation) dataset, here the image itself comes with `uint16` dtype rather than mask. So, saving `uint16` image with `uint8` will result in precision loss.
Perhaps we can adapt solution 1 for this issue and Add support for `uint16` image separately? | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | Using Array2D makes it not practical to use to train a model - in `transformers` we expect an image type.
There is a pull request to support more precision than uint8 in Image() here: https://github.com/huggingface/datasets/pull/5365/files
we can probably merge it today and do a release right away | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 47 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
Using Array2D makes it not practical to use to train a model - in `transformers` we expect an image type.
There is a pull request to support more precision than uint8 in Image() here: https://github.com/huggingface/datasets/pull/5365/files
we can probably merge it today and do a release right away | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | Fantastic, @lhoestq!
@awsaf49 then let's wait for the PR to get merged and then take the next steps? | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 18 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
Fantastic, @lhoestq!
@awsaf49 then let's wait for the PR to get merged and then take the next steps? | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | The PR adds support for uint16 which is ok for BTS if I understand correctly, would it be ok for you ? | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 22 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
The PR adds support for uint16 which is ok for BTS if I understand correctly, would it be ok for you ? | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | If the main issue with the current version of NYU we have on the Hub is related to the precision loss stemming from `Image()`, I'd prefer if `Image()` supported float32 as well. | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 32 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
If the main issue with the current version of NYU we have on the Hub is related to the precision loss stemming from `Image()`, I'd prefer if `Image()` supported float32 as well. | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | I also prefer `float32` as it offers more precision. But I'm not sure if we'll be able to visualize image with `float32` precision. | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 23 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
I also prefer `float32` as it offers more precision. But I'm not sure if we'll be able to visualize image with `float32` precision. | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | We could have a separate loading for the float32 one using Array2D, but I feel like it's less convenient to use due to the amount of disk space and because it's not an Image() type. That's why I think uint16 is a better solution for users | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 46 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
We could have a separate loading for the float32 one using Array2D, but I feel like it's less convenient to use due to the amount of disk space and because it's not an Image() type. That's why I think uint16 is a better solution for users | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | Yep. I just tested from the PR and it works:
```python
>>> train_dataset = load_dataset("sayakpaul/nyu_depth_v2", split="train", streaming=True)
Downloading readme: 100%|██████████████████| 8.71k/8.71k [00:00<00:00, 3.60MB/s]
>>> next(iter(train_dataset))
{'image': <PIL.PngImagePlugin.PngImageFile image mode=RGB size=640x480 at 0x1382ED7F0>,
'depth_map': <PIL.TiffImagePlugin.TiffImageFile image mode=F size=640x480 at 0x1382EDF28>}
>>> x = next(iter(train_dataset))
>>> np.asarray(x["depth_map"])
array([[0. , 0. , 0. , ..., 0. , 0. ,
0. ],
[0. , 0. , 0. , ..., 0. , 0. ,
0. ],
[0. , 0. , 0. , ..., 0. , 0. ,
0. ],
...,
[0. , 2.2861192, 2.2861192, ..., 2.234162 , 2.234162 ,
0. ],
[0. , 2.2861192, 2.2861192, ..., 2.234162 , 2.234162 ,
0. ],
[0. , 2.2861192, 2.2861192, ..., 2.234162 , 2.234162 ,
0. ]], dtype=float32)
``` | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 120 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
Yep. I just tested from the PR and it works:
```python
>>> train_dataset = load_dataset("sayakpaul/nyu_depth_v2", split="train", streaming=True)
Downloading readme: 100%|██████████████████| 8.71k/8.71k [00:00<00:00, 3.60MB/s]
>>> next(iter(train_dataset))
{'image': <PIL.PngImagePlugin.PngImageFile image mode=RGB size=640x480 at 0x1382ED7F0>,
'depth_map': <PIL.TiffImagePlugin.TiffImageFile image mode=F size=640x480 at 0x1382EDF28>}
>>> x = next(iter(train_dataset))
>>> np.asarray(x["depth_map"])
array([[0. , 0. , 0. , ..., 0. , 0. ,
0. ],
[0. , 0. , 0. , ..., 0. , 0. ,
0. ],
[0. , 0. , 0. , ..., 0. , 0. ,
0. ],
...,
[0. , 2.2861192, 2.2861192, ..., 2.234162 , 2.234162 ,
0. ],
[0. , 2.2861192, 2.2861192, ..., 2.234162 , 2.234162 ,
0. ],
[0. , 2.2861192, 2.2861192, ..., 2.234162 , 2.234162 ,
0. ]], dtype=float32)
``` | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | Great! the case is closed! This issue has been solved and I have to say, it was quite the thrill ride. I felt like Sherlock Holmes, solving a mystery and finding the bug🕵️♂️. But in all seriousness, it was a pleasure working on this issue and I'm glad we could get to the bottom of it.
On another note, should I consider closing the issue? I think we still need to make updates on https://github.com/huggingface/blog and https://github.com/huggingface/datasets/blob/main/docs/source/depth_estimation.mdx | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 77 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
Great! the case is closed! This issue has been solved and I have to say, it was quite the thrill ride. I felt like Sherlock Holmes, solving a mystery and finding the bug🕵️♂️. But in all seriousness, it was a pleasure working on this issue and I'm glad we could get to the bottom of it.
On another note, should I consider closing the issue? I think we still need to make updates on https://github.com/huggingface/blog and https://github.com/huggingface/datasets/blob/main/docs/source/depth_estimation.mdx | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | Haha thanks Mr Holmes :p
maybe let's close this issue when we're done updating the blog post and the documentation | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 20 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
Haha thanks Mr Holmes :p
maybe let's close this issue when we're done updating the blog post and the documentation | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | @awsaf49 thank you for your hard work!
I am a little unsure why the other links need to be updated, though. They all rely on datasets internally. | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 27 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
@awsaf49 thank you for your hard work!
I am a little unsure why the other links need to be updated, though. They all rely on datasets internally. | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | I think depth_map still shows discretized version. It would be nice to have corrected one.
<img src="https://huggingface.co/datasets/huggingface/documentation-images/resolve/main/datasets/depth_est_target_viz.png" width = 300> | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 20 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
I think depth_map still shows discretized version. It would be nice to have corrected one.
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | Also, I think we need to make some changes in the code to visualize depth_map as it is `float32` . `plot.imshow()` supports either [0, 1] + float32 or [0. 255] + uint8 | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 32 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
Also, I think we need to make some changes in the code to visualize depth_map as it is `float32` . `plot.imshow()` supports either [0, 1] + float32 or [0. 255] + uint8 | [
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https://github.com/huggingface/datasets/issues/5461 | Discrepancy in `nyu_depth_v2` dataset | Oh yes! Do you want to start with the fixes? Please feel free to say no but I wanted to make sure your contributions are reflected properly in our doc and the blog :) | ### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5 | 327 | 34 | Discrepancy in `nyu_depth_v2` dataset
### Describe the bug
I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison,
I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF.
Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue?
### Steps to reproduce the bug
This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo.
> Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same
### Expected behavior
Expected depth maps should be smooth rather than discrete/clipped.
### Environment info
- `datasets` version: 2.8.1.dev0
- Platform: Linux-5.10.147+-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
Oh yes! Do you want to start with the fixes? Please feel free to say no but I wanted to make sure your contributions are reflected properly in our doc and the blog :) | [
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https://github.com/huggingface/datasets/issues/5458 | slice split while streaming | Hi! Yes, that's correct. When `streaming` is `True`, only split names can be specified as `split`, and for slicing, you have to use `.skip`/`.take` instead.
E.g.
`load_dataset("lhoestq/demo1",revision=None, streaming=True, split="train[:3]")`
rewritten with `.skip`/`.take`:
`load_dataset("lhoestq/demo1",revision=None, streaming=True, split="train").take(3)`
| ### Describe the bug
When using the `load_dataset` function with streaming set to True, slicing splits is apparently not supported.
Did I miss this in the documentation?
### Steps to reproduce the bug
`load_dataset("lhoestq/demo1",revision=None, streaming=True, split="train[:3]")`
causes ValueError: Bad split: train[:3]. Available splits: ['train', 'test'] in builder.py, line 1213, in as_streaming_dataset
### Expected behavior
The first 3 entries of the dataset as a stream
### Environment info
- `datasets` version: 2.8.0
- Platform: Windows-10-10.0.19045-SP0
- Python version: 3.10.9
- PyArrow version: 10.0.1
- Pandas version: 1.5.2
| 328 | 35 | slice split while streaming
### Describe the bug
When using the `load_dataset` function with streaming set to True, slicing splits is apparently not supported.
Did I miss this in the documentation?
### Steps to reproduce the bug
`load_dataset("lhoestq/demo1",revision=None, streaming=True, split="train[:3]")`
causes ValueError: Bad split: train[:3]. Available splits: ['train', 'test'] in builder.py, line 1213, in as_streaming_dataset
### Expected behavior
The first 3 entries of the dataset as a stream
### Environment info
- `datasets` version: 2.8.0
- Platform: Windows-10-10.0.19045-SP0
- Python version: 3.10.9
- PyArrow version: 10.0.1
- Pandas version: 1.5.2
Hi! Yes, that's correct. When `streaming` is `True`, only split names can be specified as `split`, and for slicing, you have to use `.skip`/`.take` instead.
E.g.
`load_dataset("lhoestq/demo1",revision=None, streaming=True, split="train[:3]")`
rewritten with `.skip`/`.take`:
`load_dataset("lhoestq/demo1",revision=None, streaming=True, split="train").take(3)`
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] |
https://github.com/huggingface/datasets/issues/5457 | prebuilt dataset relies on `downloads/extracted` | Hi!
This issue is due to our audio/image datasets not being self-contained. This allows us to save disk space (files are written only once) but also leads to the issues like this one. We plan to make all our datasets self-contained in Datasets 3.0.
In the meantime, you can run the following map to ensure your dataset is self-contained:
```python
from datasets.table import embed_table_storage
# load_dataset ...
dset = dset.with_format("arrow")
dset.map(embed_table_storage, batched=True)
dset = dset.with_format("python")
```
| ### Describe the bug
I pre-built the dataset:
```
python -c 'import sys; from datasets import load_dataset; ds=load_dataset(sys.argv[1])' HuggingFaceM4/general-pmd-synthetic-testing
```
and it can be used just fine.
now I wipe out `downloads/extracted` and it no longer works.
```
rm -r ~/.cache/huggingface/datasets/downloads
```
That is I can still load it:
```
python -c 'import sys; from datasets import load_dataset; ds=load_dataset(sys.argv[1])' HuggingFaceM4/general-pmd-synthetic-testing
No config specified, defaulting to: general-pmd-synthetic-testing/100.unique
Found cached dataset general-pmd-synthetic-testing (/home/stas/.cache/huggingface/datasets/HuggingFaceM4___general-pmd-synthetic-testing/100.unique/1.1.1/86bc445e3e48cb5ef79de109eb4e54ff85b318cd55c3835c4ee8f86eae33d9d2)
```
but if I try to use it:
```
E stderr: Traceback (most recent call last):
E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/main.py", line 116, in <module>
E stderr: train_loader, val_loader = get_dataloaders(
E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/dataset.py", line 170, in get_dataloaders
E stderr: train_loader = get_dataloader_from_config(
E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/dataset.py", line 443, in get_dataloader_from_config
E stderr: dataloader = get_dataloader(
E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/dataset.py", line 264, in get_dataloader
E stderr: is_pmd = "meta" in hf_dataset[0] and "source" in hf_dataset[0]
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/arrow_dataset.py", line 2601, in __getitem__
E stderr: return self._getitem(
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/arrow_dataset.py", line 2586, in _getitem
E stderr: formatted_output = format_table(
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 634, in format_table
E stderr: return formatter(pa_table, query_type=query_type)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 406, in __call__
E stderr: return self.format_row(pa_table)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 442, in format_row
E stderr: row = self.python_features_decoder.decode_row(row)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 225, in decode_row
E stderr: return self.features.decode_example(row) if self.features else row
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1846, in decode_example
E stderr: return {
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1847, in <dictcomp>
E stderr: column_name: decode_nested_example(feature, value, token_per_repo_id=token_per_repo_id)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1304, in decode_nested_example
E stderr: return decode_nested_example([schema.feature], obj)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1296, in decode_nested_example
E stderr: if decode_nested_example(sub_schema, first_elmt) != first_elmt:
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1309, in decode_nested_example
E stderr: return schema.decode_example(obj, token_per_repo_id=token_per_repo_id)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/image.py", line 144, in decode_example
E stderr: image = PIL.Image.open(path)
E stderr: File "/home/stas/anaconda3/envs/py38-pt113/lib/python3.8/site-packages/PIL/Image.py", line 3092, in open
E stderr: fp = builtins.open(filename, "rb")
E stderr: FileNotFoundError: [Errno 2] No such file or directory: '/mnt/nvme0/code/data/cache/huggingface/datasets/downloads/extracted/134227b9b94c4eccf19b205bf3021d4492d0227b9be6c2ddb6bf517d8d55a8cb/data/101/images_01.jpg'
```
Only if I wipe out the cached dir and rebuild then it starts working as `download/extracted` is back again with extracted files.
```
rm -r ~/.cache/huggingface/datasets/HuggingFaceM4___general-pmd-synthetic-testing
python -c 'import sys; from datasets import load_dataset; ds=load_dataset(sys.argv[1])' HuggingFaceM4/general-pmd-synthetic-testing
```
I think there are 2 issues here:
1. why does it still rely on extracted files after `arrow` files were printed - did I do something incorrectly when creating this dataset?
2. why doesn't the dataset know that it has been gutted and loads just fine? If it has a dependency on `download/extracted` then `load_dataset` should check if it's there and fail or force rebuilding. I am sure this could be a very expensive operation, so probably really solving #1 will not require this check. and this second item is probably an overkill. Other than perhaps if it had an optional `check_consistency` flag to do that.
### Environment info
datasets@main | 329 | 76 | prebuilt dataset relies on `downloads/extracted`
### Describe the bug
I pre-built the dataset:
```
python -c 'import sys; from datasets import load_dataset; ds=load_dataset(sys.argv[1])' HuggingFaceM4/general-pmd-synthetic-testing
```
and it can be used just fine.
now I wipe out `downloads/extracted` and it no longer works.
```
rm -r ~/.cache/huggingface/datasets/downloads
```
That is I can still load it:
```
python -c 'import sys; from datasets import load_dataset; ds=load_dataset(sys.argv[1])' HuggingFaceM4/general-pmd-synthetic-testing
No config specified, defaulting to: general-pmd-synthetic-testing/100.unique
Found cached dataset general-pmd-synthetic-testing (/home/stas/.cache/huggingface/datasets/HuggingFaceM4___general-pmd-synthetic-testing/100.unique/1.1.1/86bc445e3e48cb5ef79de109eb4e54ff85b318cd55c3835c4ee8f86eae33d9d2)
```
but if I try to use it:
```
E stderr: Traceback (most recent call last):
E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/main.py", line 116, in <module>
E stderr: train_loader, val_loader = get_dataloaders(
E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/dataset.py", line 170, in get_dataloaders
E stderr: train_loader = get_dataloader_from_config(
E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/dataset.py", line 443, in get_dataloader_from_config
E stderr: dataloader = get_dataloader(
E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/dataset.py", line 264, in get_dataloader
E stderr: is_pmd = "meta" in hf_dataset[0] and "source" in hf_dataset[0]
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/arrow_dataset.py", line 2601, in __getitem__
E stderr: return self._getitem(
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/arrow_dataset.py", line 2586, in _getitem
E stderr: formatted_output = format_table(
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 634, in format_table
E stderr: return formatter(pa_table, query_type=query_type)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 406, in __call__
E stderr: return self.format_row(pa_table)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 442, in format_row
E stderr: row = self.python_features_decoder.decode_row(row)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 225, in decode_row
E stderr: return self.features.decode_example(row) if self.features else row
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1846, in decode_example
E stderr: return {
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1847, in <dictcomp>
E stderr: column_name: decode_nested_example(feature, value, token_per_repo_id=token_per_repo_id)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1304, in decode_nested_example
E stderr: return decode_nested_example([schema.feature], obj)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1296, in decode_nested_example
E stderr: if decode_nested_example(sub_schema, first_elmt) != first_elmt:
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1309, in decode_nested_example
E stderr: return schema.decode_example(obj, token_per_repo_id=token_per_repo_id)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/image.py", line 144, in decode_example
E stderr: image = PIL.Image.open(path)
E stderr: File "/home/stas/anaconda3/envs/py38-pt113/lib/python3.8/site-packages/PIL/Image.py", line 3092, in open
E stderr: fp = builtins.open(filename, "rb")
E stderr: FileNotFoundError: [Errno 2] No such file or directory: '/mnt/nvme0/code/data/cache/huggingface/datasets/downloads/extracted/134227b9b94c4eccf19b205bf3021d4492d0227b9be6c2ddb6bf517d8d55a8cb/data/101/images_01.jpg'
```
Only if I wipe out the cached dir and rebuild then it starts working as `download/extracted` is back again with extracted files.
```
rm -r ~/.cache/huggingface/datasets/HuggingFaceM4___general-pmd-synthetic-testing
python -c 'import sys; from datasets import load_dataset; ds=load_dataset(sys.argv[1])' HuggingFaceM4/general-pmd-synthetic-testing
```
I think there are 2 issues here:
1. why does it still rely on extracted files after `arrow` files were printed - did I do something incorrectly when creating this dataset?
2. why doesn't the dataset know that it has been gutted and loads just fine? If it has a dependency on `download/extracted` then `load_dataset` should check if it's there and fail or force rebuilding. I am sure this could be a very expensive operation, so probably really solving #1 will not require this check. and this second item is probably an overkill. Other than perhaps if it had an optional `check_consistency` flag to do that.
### Environment info
datasets@main
Hi!
This issue is due to our audio/image datasets not being self-contained. This allows us to save disk space (files are written only once) but also leads to the issues like this one. We plan to make all our datasets self-contained in Datasets 3.0.
In the meantime, you can run the following map to ensure your dataset is self-contained:
```python
from datasets.table import embed_table_storage
# load_dataset ...
dset = dset.with_format("arrow")
dset.map(embed_table_storage, batched=True)
dset = dset.with_format("python")
```
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https://github.com/huggingface/datasets/issues/5457 | prebuilt dataset relies on `downloads/extracted` | Understood. Thank you, Mario.
Perhaps the solution could be very simple - move the extracted files into the directory of the cached dataset? Which would make it self-contained already and won't require waiting for a new major release. Unless I'm missing some back-compat nuance.
But regardless if X relies on Y - it could check if Y is still there when loading X. so not checking full consistency but just the top-level directory it relies on. | ### Describe the bug
I pre-built the dataset:
```
python -c 'import sys; from datasets import load_dataset; ds=load_dataset(sys.argv[1])' HuggingFaceM4/general-pmd-synthetic-testing
```
and it can be used just fine.
now I wipe out `downloads/extracted` and it no longer works.
```
rm -r ~/.cache/huggingface/datasets/downloads
```
That is I can still load it:
```
python -c 'import sys; from datasets import load_dataset; ds=load_dataset(sys.argv[1])' HuggingFaceM4/general-pmd-synthetic-testing
No config specified, defaulting to: general-pmd-synthetic-testing/100.unique
Found cached dataset general-pmd-synthetic-testing (/home/stas/.cache/huggingface/datasets/HuggingFaceM4___general-pmd-synthetic-testing/100.unique/1.1.1/86bc445e3e48cb5ef79de109eb4e54ff85b318cd55c3835c4ee8f86eae33d9d2)
```
but if I try to use it:
```
E stderr: Traceback (most recent call last):
E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/main.py", line 116, in <module>
E stderr: train_loader, val_loader = get_dataloaders(
E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/dataset.py", line 170, in get_dataloaders
E stderr: train_loader = get_dataloader_from_config(
E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/dataset.py", line 443, in get_dataloader_from_config
E stderr: dataloader = get_dataloader(
E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/dataset.py", line 264, in get_dataloader
E stderr: is_pmd = "meta" in hf_dataset[0] and "source" in hf_dataset[0]
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/arrow_dataset.py", line 2601, in __getitem__
E stderr: return self._getitem(
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/arrow_dataset.py", line 2586, in _getitem
E stderr: formatted_output = format_table(
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 634, in format_table
E stderr: return formatter(pa_table, query_type=query_type)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 406, in __call__
E stderr: return self.format_row(pa_table)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 442, in format_row
E stderr: row = self.python_features_decoder.decode_row(row)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 225, in decode_row
E stderr: return self.features.decode_example(row) if self.features else row
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1846, in decode_example
E stderr: return {
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1847, in <dictcomp>
E stderr: column_name: decode_nested_example(feature, value, token_per_repo_id=token_per_repo_id)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1304, in decode_nested_example
E stderr: return decode_nested_example([schema.feature], obj)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1296, in decode_nested_example
E stderr: if decode_nested_example(sub_schema, first_elmt) != first_elmt:
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1309, in decode_nested_example
E stderr: return schema.decode_example(obj, token_per_repo_id=token_per_repo_id)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/image.py", line 144, in decode_example
E stderr: image = PIL.Image.open(path)
E stderr: File "/home/stas/anaconda3/envs/py38-pt113/lib/python3.8/site-packages/PIL/Image.py", line 3092, in open
E stderr: fp = builtins.open(filename, "rb")
E stderr: FileNotFoundError: [Errno 2] No such file or directory: '/mnt/nvme0/code/data/cache/huggingface/datasets/downloads/extracted/134227b9b94c4eccf19b205bf3021d4492d0227b9be6c2ddb6bf517d8d55a8cb/data/101/images_01.jpg'
```
Only if I wipe out the cached dir and rebuild then it starts working as `download/extracted` is back again with extracted files.
```
rm -r ~/.cache/huggingface/datasets/HuggingFaceM4___general-pmd-synthetic-testing
python -c 'import sys; from datasets import load_dataset; ds=load_dataset(sys.argv[1])' HuggingFaceM4/general-pmd-synthetic-testing
```
I think there are 2 issues here:
1. why does it still rely on extracted files after `arrow` files were printed - did I do something incorrectly when creating this dataset?
2. why doesn't the dataset know that it has been gutted and loads just fine? If it has a dependency on `download/extracted` then `load_dataset` should check if it's there and fail or force rebuilding. I am sure this could be a very expensive operation, so probably really solving #1 will not require this check. and this second item is probably an overkill. Other than perhaps if it had an optional `check_consistency` flag to do that.
### Environment info
datasets@main | 329 | 76 | prebuilt dataset relies on `downloads/extracted`
### Describe the bug
I pre-built the dataset:
```
python -c 'import sys; from datasets import load_dataset; ds=load_dataset(sys.argv[1])' HuggingFaceM4/general-pmd-synthetic-testing
```
and it can be used just fine.
now I wipe out `downloads/extracted` and it no longer works.
```
rm -r ~/.cache/huggingface/datasets/downloads
```
That is I can still load it:
```
python -c 'import sys; from datasets import load_dataset; ds=load_dataset(sys.argv[1])' HuggingFaceM4/general-pmd-synthetic-testing
No config specified, defaulting to: general-pmd-synthetic-testing/100.unique
Found cached dataset general-pmd-synthetic-testing (/home/stas/.cache/huggingface/datasets/HuggingFaceM4___general-pmd-synthetic-testing/100.unique/1.1.1/86bc445e3e48cb5ef79de109eb4e54ff85b318cd55c3835c4ee8f86eae33d9d2)
```
but if I try to use it:
```
E stderr: Traceback (most recent call last):
E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/main.py", line 116, in <module>
E stderr: train_loader, val_loader = get_dataloaders(
E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/dataset.py", line 170, in get_dataloaders
E stderr: train_loader = get_dataloader_from_config(
E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/dataset.py", line 443, in get_dataloader_from_config
E stderr: dataloader = get_dataloader(
E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/dataset.py", line 264, in get_dataloader
E stderr: is_pmd = "meta" in hf_dataset[0] and "source" in hf_dataset[0]
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/arrow_dataset.py", line 2601, in __getitem__
E stderr: return self._getitem(
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/arrow_dataset.py", line 2586, in _getitem
E stderr: formatted_output = format_table(
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 634, in format_table
E stderr: return formatter(pa_table, query_type=query_type)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 406, in __call__
E stderr: return self.format_row(pa_table)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 442, in format_row
E stderr: row = self.python_features_decoder.decode_row(row)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 225, in decode_row
E stderr: return self.features.decode_example(row) if self.features else row
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1846, in decode_example
E stderr: return {
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1847, in <dictcomp>
E stderr: column_name: decode_nested_example(feature, value, token_per_repo_id=token_per_repo_id)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1304, in decode_nested_example
E stderr: return decode_nested_example([schema.feature], obj)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1296, in decode_nested_example
E stderr: if decode_nested_example(sub_schema, first_elmt) != first_elmt:
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1309, in decode_nested_example
E stderr: return schema.decode_example(obj, token_per_repo_id=token_per_repo_id)
E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/image.py", line 144, in decode_example
E stderr: image = PIL.Image.open(path)
E stderr: File "/home/stas/anaconda3/envs/py38-pt113/lib/python3.8/site-packages/PIL/Image.py", line 3092, in open
E stderr: fp = builtins.open(filename, "rb")
E stderr: FileNotFoundError: [Errno 2] No such file or directory: '/mnt/nvme0/code/data/cache/huggingface/datasets/downloads/extracted/134227b9b94c4eccf19b205bf3021d4492d0227b9be6c2ddb6bf517d8d55a8cb/data/101/images_01.jpg'
```
Only if I wipe out the cached dir and rebuild then it starts working as `download/extracted` is back again with extracted files.
```
rm -r ~/.cache/huggingface/datasets/HuggingFaceM4___general-pmd-synthetic-testing
python -c 'import sys; from datasets import load_dataset; ds=load_dataset(sys.argv[1])' HuggingFaceM4/general-pmd-synthetic-testing
```
I think there are 2 issues here:
1. why does it still rely on extracted files after `arrow` files were printed - did I do something incorrectly when creating this dataset?
2. why doesn't the dataset know that it has been gutted and loads just fine? If it has a dependency on `download/extracted` then `load_dataset` should check if it's there and fail or force rebuilding. I am sure this could be a very expensive operation, so probably really solving #1 will not require this check. and this second item is probably an overkill. Other than perhaps if it had an optional `check_consistency` flag to do that.
### Environment info
datasets@main
Understood. Thank you, Mario.
Perhaps the solution could be very simple - move the extracted files into the directory of the cached dataset? Which would make it self-contained already and won't require waiting for a new major release. Unless I'm missing some back-compat nuance.
But regardless if X relies on Y - it could check if Y is still there when loading X. so not checking full consistency but just the top-level directory it relies on. | [
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https://github.com/huggingface/datasets/issues/5454 | Save and resume the state of a DataLoader | Something that'd be nice to have is "manual update of state". One of the learning from training LLMs is the ability to skip some batches whenever we notice huge spike might be handy. | It would be nice when using `datasets` with a PyTorch DataLoader to be able to resume a training from a DataLoader state (e.g. to resume a training that crashed)
What I have in mind (but lmk if you have other ideas or comments):
For map-style datasets, this requires to have a PyTorch Sampler state that can be saved and reloaded per node and worker.
For iterable datasets, this requires to save the state of the dataset iterator, which includes:
- the current shard idx and row position in the current shard
- the epoch number
- the rng state
- the shuffle buffer
Right now you can already resume the data loading of an iterable dataset by using `IterableDataset.skip` but it takes a lot of time because it re-iterates on all the past data until it reaches the resuming point.
cc @stas00 @sgugger | 330 | 33 | Save and resume the state of a DataLoader
It would be nice when using `datasets` with a PyTorch DataLoader to be able to resume a training from a DataLoader state (e.g. to resume a training that crashed)
What I have in mind (but lmk if you have other ideas or comments):
For map-style datasets, this requires to have a PyTorch Sampler state that can be saved and reloaded per node and worker.
For iterable datasets, this requires to save the state of the dataset iterator, which includes:
- the current shard idx and row position in the current shard
- the epoch number
- the rng state
- the shuffle buffer
Right now you can already resume the data loading of an iterable dataset by using `IterableDataset.skip` but it takes a lot of time because it re-iterates on all the past data until it reaches the resuming point.
cc @stas00 @sgugger
Something that'd be nice to have is "manual update of state". One of the learning from training LLMs is the ability to skip some batches whenever we notice huge spike might be handy. | [
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https://github.com/huggingface/datasets/issues/5454 | Save and resume the state of a DataLoader | Your outline spec is very sound and clear, @lhoestq - thank you!
@thomasw21, indeed that would be a wonderful extra feature. In Megatron-Deepspeed we manually drained the dataloader for the range we wanted. I wasn't very satisfied with the way we did it, since its behavior would change if you were to do multiple range skips. I think it should remember all the ranges it skipped and not just skip the last range - since otherwise the data is inconsistent (but we probably should discuss this in a separate issue not to derail this much bigger one). | It would be nice when using `datasets` with a PyTorch DataLoader to be able to resume a training from a DataLoader state (e.g. to resume a training that crashed)
What I have in mind (but lmk if you have other ideas or comments):
For map-style datasets, this requires to have a PyTorch Sampler state that can be saved and reloaded per node and worker.
For iterable datasets, this requires to save the state of the dataset iterator, which includes:
- the current shard idx and row position in the current shard
- the epoch number
- the rng state
- the shuffle buffer
Right now you can already resume the data loading of an iterable dataset by using `IterableDataset.skip` but it takes a lot of time because it re-iterates on all the past data until it reaches the resuming point.
cc @stas00 @sgugger | 330 | 97 | Save and resume the state of a DataLoader
It would be nice when using `datasets` with a PyTorch DataLoader to be able to resume a training from a DataLoader state (e.g. to resume a training that crashed)
What I have in mind (but lmk if you have other ideas or comments):
For map-style datasets, this requires to have a PyTorch Sampler state that can be saved and reloaded per node and worker.
For iterable datasets, this requires to save the state of the dataset iterator, which includes:
- the current shard idx and row position in the current shard
- the epoch number
- the rng state
- the shuffle buffer
Right now you can already resume the data loading of an iterable dataset by using `IterableDataset.skip` but it takes a lot of time because it re-iterates on all the past data until it reaches the resuming point.
cc @stas00 @sgugger
Your outline spec is very sound and clear, @lhoestq - thank you!
@thomasw21, indeed that would be a wonderful extra feature. In Megatron-Deepspeed we manually drained the dataloader for the range we wanted. I wasn't very satisfied with the way we did it, since its behavior would change if you were to do multiple range skips. I think it should remember all the ranges it skipped and not just skip the last range - since otherwise the data is inconsistent (but we probably should discuss this in a separate issue not to derail this much bigger one). | [
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https://github.com/huggingface/datasets/issues/5451 | ImageFolder BadZipFile: Bad offset for central directory | Hi ! Could you share the full stack trace ? Which dataset did you try to load ?
it may be related to https://github.com/huggingface/datasets/pull/5640 | ### Describe the bug
I'm getting the following exception:
```
lib/python3.10/zipfile.py:1353 in _RealGetContents │
│ │
│ 1350 │ │ # self.start_dir: Position of start of central directory │
│ 1351 │ │ self.start_dir = offset_cd + concat │
│ 1352 │ │ if self.start_dir < 0: │
│ ❱ 1353 │ │ │ raise BadZipFile("Bad offset for central directory") │
│ 1354 │ │ fp.seek(self.start_dir, 0) │
│ 1355 │ │ data = fp.read(size_cd) │
│ 1356 │ │ fp = io.BytesIO(data) │
╰──────────────────────────────────────────────────────────────────────────────────────────────────╯
BadZipFile: Bad offset for central directory
Extracting data files: 35%|█████████████████▊ | 38572/110812 [00:10<00:20, 3576.26it/s]
```
### Steps to reproduce the bug
```
load_dataset(
args.dataset_name,
args.dataset_config_name,
cache_dir=args.cache_dir,
),
```
### Expected behavior
loads the dataset
### Environment info
datasets==2.8.0
Python 3.10.8
Linux 129-146-3-202 5.15.0-52-generic #58~20.04.1-Ubuntu SMP Thu Oct 13 13:09:46 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux | 331 | 24 | ImageFolder BadZipFile: Bad offset for central directory
### Describe the bug
I'm getting the following exception:
```
lib/python3.10/zipfile.py:1353 in _RealGetContents │
│ │
│ 1350 │ │ # self.start_dir: Position of start of central directory │
│ 1351 │ │ self.start_dir = offset_cd + concat │
│ 1352 │ │ if self.start_dir < 0: │
│ ❱ 1353 │ │ │ raise BadZipFile("Bad offset for central directory") │
│ 1354 │ │ fp.seek(self.start_dir, 0) │
│ 1355 │ │ data = fp.read(size_cd) │
│ 1356 │ │ fp = io.BytesIO(data) │
╰──────────────────────────────────────────────────────────────────────────────────────────────────╯
BadZipFile: Bad offset for central directory
Extracting data files: 35%|█████████████████▊ | 38572/110812 [00:10<00:20, 3576.26it/s]
```
### Steps to reproduce the bug
```
load_dataset(
args.dataset_name,
args.dataset_config_name,
cache_dir=args.cache_dir,
),
```
### Expected behavior
loads the dataset
### Environment info
datasets==2.8.0
Python 3.10.8
Linux 129-146-3-202 5.15.0-52-generic #58~20.04.1-Ubuntu SMP Thu Oct 13 13:09:46 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux
Hi ! Could you share the full stack trace ? Which dataset did you try to load ?
it may be related to https://github.com/huggingface/datasets/pull/5640 | [
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https://github.com/huggingface/datasets/issues/5451 | ImageFolder BadZipFile: Bad offset for central directory | The `BadZipFile` error means the ZIP file is corrupted, so I'm closing this issue as it's not directly related to `datasets`. | ### Describe the bug
I'm getting the following exception:
```
lib/python3.10/zipfile.py:1353 in _RealGetContents │
│ │
│ 1350 │ │ # self.start_dir: Position of start of central directory │
│ 1351 │ │ self.start_dir = offset_cd + concat │
│ 1352 │ │ if self.start_dir < 0: │
│ ❱ 1353 │ │ │ raise BadZipFile("Bad offset for central directory") │
│ 1354 │ │ fp.seek(self.start_dir, 0) │
│ 1355 │ │ data = fp.read(size_cd) │
│ 1356 │ │ fp = io.BytesIO(data) │
╰──────────────────────────────────────────────────────────────────────────────────────────────────╯
BadZipFile: Bad offset for central directory
Extracting data files: 35%|█████████████████▊ | 38572/110812 [00:10<00:20, 3576.26it/s]
```
### Steps to reproduce the bug
```
load_dataset(
args.dataset_name,
args.dataset_config_name,
cache_dir=args.cache_dir,
),
```
### Expected behavior
loads the dataset
### Environment info
datasets==2.8.0
Python 3.10.8
Linux 129-146-3-202 5.15.0-52-generic #58~20.04.1-Ubuntu SMP Thu Oct 13 13:09:46 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux | 331 | 21 | ImageFolder BadZipFile: Bad offset for central directory
### Describe the bug
I'm getting the following exception:
```
lib/python3.10/zipfile.py:1353 in _RealGetContents │
│ │
│ 1350 │ │ # self.start_dir: Position of start of central directory │
│ 1351 │ │ self.start_dir = offset_cd + concat │
│ 1352 │ │ if self.start_dir < 0: │
│ ❱ 1353 │ │ │ raise BadZipFile("Bad offset for central directory") │
│ 1354 │ │ fp.seek(self.start_dir, 0) │
│ 1355 │ │ data = fp.read(size_cd) │
│ 1356 │ │ fp = io.BytesIO(data) │
╰──────────────────────────────────────────────────────────────────────────────────────────────────╯
BadZipFile: Bad offset for central directory
Extracting data files: 35%|█████████████████▊ | 38572/110812 [00:10<00:20, 3576.26it/s]
```
### Steps to reproduce the bug
```
load_dataset(
args.dataset_name,
args.dataset_config_name,
cache_dir=args.cache_dir,
),
```
### Expected behavior
loads the dataset
### Environment info
datasets==2.8.0
Python 3.10.8
Linux 129-146-3-202 5.15.0-52-generic #58~20.04.1-Ubuntu SMP Thu Oct 13 13:09:46 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux
The `BadZipFile` error means the ZIP file is corrupted, so I'm closing this issue as it's not directly related to `datasets`. | [
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https://github.com/huggingface/datasets/issues/5451 | ImageFolder BadZipFile: Bad offset for central directory | For others that find this issue following a `BadZipFile` error, I had the same problem because I had a file in a folder dataset `my-image.target` and the datasets library was incorrectly determining that the (PNG) file was a zip archive. When it tried to extract the file, this error occurred.
Updating to `datasets==2.12.0` fixed the problem for me. | ### Describe the bug
I'm getting the following exception:
```
lib/python3.10/zipfile.py:1353 in _RealGetContents │
│ │
│ 1350 │ │ # self.start_dir: Position of start of central directory │
│ 1351 │ │ self.start_dir = offset_cd + concat │
│ 1352 │ │ if self.start_dir < 0: │
│ ❱ 1353 │ │ │ raise BadZipFile("Bad offset for central directory") │
│ 1354 │ │ fp.seek(self.start_dir, 0) │
│ 1355 │ │ data = fp.read(size_cd) │
│ 1356 │ │ fp = io.BytesIO(data) │
╰──────────────────────────────────────────────────────────────────────────────────────────────────╯
BadZipFile: Bad offset for central directory
Extracting data files: 35%|█████████████████▊ | 38572/110812 [00:10<00:20, 3576.26it/s]
```
### Steps to reproduce the bug
```
load_dataset(
args.dataset_name,
args.dataset_config_name,
cache_dir=args.cache_dir,
),
```
### Expected behavior
loads the dataset
### Environment info
datasets==2.8.0
Python 3.10.8
Linux 129-146-3-202 5.15.0-52-generic #58~20.04.1-Ubuntu SMP Thu Oct 13 13:09:46 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux | 331 | 58 | ImageFolder BadZipFile: Bad offset for central directory
### Describe the bug
I'm getting the following exception:
```
lib/python3.10/zipfile.py:1353 in _RealGetContents │
│ │
│ 1350 │ │ # self.start_dir: Position of start of central directory │
│ 1351 │ │ self.start_dir = offset_cd + concat │
│ 1352 │ │ if self.start_dir < 0: │
│ ❱ 1353 │ │ │ raise BadZipFile("Bad offset for central directory") │
│ 1354 │ │ fp.seek(self.start_dir, 0) │
│ 1355 │ │ data = fp.read(size_cd) │
│ 1356 │ │ fp = io.BytesIO(data) │
╰──────────────────────────────────────────────────────────────────────────────────────────────────╯
BadZipFile: Bad offset for central directory
Extracting data files: 35%|█████████████████▊ | 38572/110812 [00:10<00:20, 3576.26it/s]
```
### Steps to reproduce the bug
```
load_dataset(
args.dataset_name,
args.dataset_config_name,
cache_dir=args.cache_dir,
),
```
### Expected behavior
loads the dataset
### Environment info
datasets==2.8.0
Python 3.10.8
Linux 129-146-3-202 5.15.0-52-generic #58~20.04.1-Ubuntu SMP Thu Oct 13 13:09:46 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux
For others that find this issue following a `BadZipFile` error, I had the same problem because I had a file in a folder dataset `my-image.target` and the datasets library was incorrectly determining that the (PNG) file was a zip archive. When it tried to extract the file, this error occurred.
Updating to `datasets==2.12.0` fixed the problem for me. | [
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] |
https://github.com/huggingface/datasets/issues/5450 | to_tf_dataset with a TF collator causes bizarrely persistent slowdown | A possible hint: The function it seems to be spending a lot of time in (when iterating over the original dataset) is `_get_mp` in the PIL JPEG decoder:
| ### Describe the bug
This will make more sense if you take a look at [a Colab notebook that reproduces this issue.](https://colab.research.google.com/drive/1rxyeciQFWJTI0WrZ5aojp4Ls1ut18fNH?usp=sharing)
Briefly, there are several datasets that, when you iterate over them with `to_tf_dataset` **and** a data collator that returns `tf` tensors, become very slow. We haven't been able to figure this one out - it can be intermittent, and we have no idea what could possibly cause it. The weirdest thing is that **the slowdown affects other attempts to access the underlying dataset**. If you try to iterate over the `tf.data.Dataset`, then interrupt execution, and then try to iterate over the original dataset, the original dataset is now also very slow! This is true even if the dataset format is not set to `tf` - the iteration is slow even though it's not calling TF at all!
There is a simple workaround for this - we can simply get our data collators to return `np` tensors. When we do this, the bug is never triggered and everything is fine. In general, `np` is preferred for this kind of preprocessing work anyway, when the preprocessing is not going to be compiled into a pure `tf.data` pipeline! However, the issue is fascinating, and the TF team were wondering if anyone in datasets (cc @lhoestq @mariosasko) might have an idea of what could cause this.
### Steps to reproduce the bug
Run the attached Colab.
### Expected behavior
The slowdown should go away, or at least not persist after we stop iterating over the `tf.data.Dataset`
### Environment info
The issue occurs on multiple versions of Python and TF, both on local machines and on Colab.
All testing was done using the latest versions of `transformers` and `datasets` from `main` | 332 | 29 | to_tf_dataset with a TF collator causes bizarrely persistent slowdown
### Describe the bug
This will make more sense if you take a look at [a Colab notebook that reproduces this issue.](https://colab.research.google.com/drive/1rxyeciQFWJTI0WrZ5aojp4Ls1ut18fNH?usp=sharing)
Briefly, there are several datasets that, when you iterate over them with `to_tf_dataset` **and** a data collator that returns `tf` tensors, become very slow. We haven't been able to figure this one out - it can be intermittent, and we have no idea what could possibly cause it. The weirdest thing is that **the slowdown affects other attempts to access the underlying dataset**. If you try to iterate over the `tf.data.Dataset`, then interrupt execution, and then try to iterate over the original dataset, the original dataset is now also very slow! This is true even if the dataset format is not set to `tf` - the iteration is slow even though it's not calling TF at all!
There is a simple workaround for this - we can simply get our data collators to return `np` tensors. When we do this, the bug is never triggered and everything is fine. In general, `np` is preferred for this kind of preprocessing work anyway, when the preprocessing is not going to be compiled into a pure `tf.data` pipeline! However, the issue is fascinating, and the TF team were wondering if anyone in datasets (cc @lhoestq @mariosasko) might have an idea of what could cause this.
### Steps to reproduce the bug
Run the attached Colab.
### Expected behavior
The slowdown should go away, or at least not persist after we stop iterating over the `tf.data.Dataset`
### Environment info
The issue occurs on multiple versions of Python and TF, both on local machines and on Colab.
All testing was done using the latest versions of `transformers` and `datasets` from `main`
A possible hint: The function it seems to be spending a lot of time in (when iterating over the original dataset) is `_get_mp` in the PIL JPEG decoder:
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https://github.com/huggingface/datasets/issues/5450 | to_tf_dataset with a TF collator causes bizarrely persistent slowdown | If "mp" is multiprocessing, this might suggest some kind of negative interaction between the JPEG decoder and TF's handling of processes/threads. Note that we haven't merged the parallel `to_tf_dataset` PR yet, so it's not caused by that PR! | ### Describe the bug
This will make more sense if you take a look at [a Colab notebook that reproduces this issue.](https://colab.research.google.com/drive/1rxyeciQFWJTI0WrZ5aojp4Ls1ut18fNH?usp=sharing)
Briefly, there are several datasets that, when you iterate over them with `to_tf_dataset` **and** a data collator that returns `tf` tensors, become very slow. We haven't been able to figure this one out - it can be intermittent, and we have no idea what could possibly cause it. The weirdest thing is that **the slowdown affects other attempts to access the underlying dataset**. If you try to iterate over the `tf.data.Dataset`, then interrupt execution, and then try to iterate over the original dataset, the original dataset is now also very slow! This is true even if the dataset format is not set to `tf` - the iteration is slow even though it's not calling TF at all!
There is a simple workaround for this - we can simply get our data collators to return `np` tensors. When we do this, the bug is never triggered and everything is fine. In general, `np` is preferred for this kind of preprocessing work anyway, when the preprocessing is not going to be compiled into a pure `tf.data` pipeline! However, the issue is fascinating, and the TF team were wondering if anyone in datasets (cc @lhoestq @mariosasko) might have an idea of what could cause this.
### Steps to reproduce the bug
Run the attached Colab.
### Expected behavior
The slowdown should go away, or at least not persist after we stop iterating over the `tf.data.Dataset`
### Environment info
The issue occurs on multiple versions of Python and TF, both on local machines and on Colab.
All testing was done using the latest versions of `transformers` and `datasets` from `main` | 332 | 38 | to_tf_dataset with a TF collator causes bizarrely persistent slowdown
### Describe the bug
This will make more sense if you take a look at [a Colab notebook that reproduces this issue.](https://colab.research.google.com/drive/1rxyeciQFWJTI0WrZ5aojp4Ls1ut18fNH?usp=sharing)
Briefly, there are several datasets that, when you iterate over them with `to_tf_dataset` **and** a data collator that returns `tf` tensors, become very slow. We haven't been able to figure this one out - it can be intermittent, and we have no idea what could possibly cause it. The weirdest thing is that **the slowdown affects other attempts to access the underlying dataset**. If you try to iterate over the `tf.data.Dataset`, then interrupt execution, and then try to iterate over the original dataset, the original dataset is now also very slow! This is true even if the dataset format is not set to `tf` - the iteration is slow even though it's not calling TF at all!
There is a simple workaround for this - we can simply get our data collators to return `np` tensors. When we do this, the bug is never triggered and everything is fine. In general, `np` is preferred for this kind of preprocessing work anyway, when the preprocessing is not going to be compiled into a pure `tf.data` pipeline! However, the issue is fascinating, and the TF team were wondering if anyone in datasets (cc @lhoestq @mariosasko) might have an idea of what could cause this.
### Steps to reproduce the bug
Run the attached Colab.
### Expected behavior
The slowdown should go away, or at least not persist after we stop iterating over the `tf.data.Dataset`
### Environment info
The issue occurs on multiple versions of Python and TF, both on local machines and on Colab.
All testing was done using the latest versions of `transformers` and `datasets` from `main`
If "mp" is multiprocessing, this might suggest some kind of negative interaction between the JPEG decoder and TF's handling of processes/threads. Note that we haven't merged the parallel `to_tf_dataset` PR yet, so it's not caused by that PR! | [
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https://github.com/huggingface/datasets/issues/5450 | to_tf_dataset with a TF collator causes bizarrely persistent slowdown | Update: MP isn't multiprocessing at all, it's an internal PIL method for loading metadata from JPEG files. No idea why that would be a bottleneck, but I'll see if a Python profiler can't figure out where the time is actually being spent. | ### Describe the bug
This will make more sense if you take a look at [a Colab notebook that reproduces this issue.](https://colab.research.google.com/drive/1rxyeciQFWJTI0WrZ5aojp4Ls1ut18fNH?usp=sharing)
Briefly, there are several datasets that, when you iterate over them with `to_tf_dataset` **and** a data collator that returns `tf` tensors, become very slow. We haven't been able to figure this one out - it can be intermittent, and we have no idea what could possibly cause it. The weirdest thing is that **the slowdown affects other attempts to access the underlying dataset**. If you try to iterate over the `tf.data.Dataset`, then interrupt execution, and then try to iterate over the original dataset, the original dataset is now also very slow! This is true even if the dataset format is not set to `tf` - the iteration is slow even though it's not calling TF at all!
There is a simple workaround for this - we can simply get our data collators to return `np` tensors. When we do this, the bug is never triggered and everything is fine. In general, `np` is preferred for this kind of preprocessing work anyway, when the preprocessing is not going to be compiled into a pure `tf.data` pipeline! However, the issue is fascinating, and the TF team were wondering if anyone in datasets (cc @lhoestq @mariosasko) might have an idea of what could cause this.
### Steps to reproduce the bug
Run the attached Colab.
### Expected behavior
The slowdown should go away, or at least not persist after we stop iterating over the `tf.data.Dataset`
### Environment info
The issue occurs on multiple versions of Python and TF, both on local machines and on Colab.
All testing was done using the latest versions of `transformers` and `datasets` from `main` | 332 | 42 | to_tf_dataset with a TF collator causes bizarrely persistent slowdown
### Describe the bug
This will make more sense if you take a look at [a Colab notebook that reproduces this issue.](https://colab.research.google.com/drive/1rxyeciQFWJTI0WrZ5aojp4Ls1ut18fNH?usp=sharing)
Briefly, there are several datasets that, when you iterate over them with `to_tf_dataset` **and** a data collator that returns `tf` tensors, become very slow. We haven't been able to figure this one out - it can be intermittent, and we have no idea what could possibly cause it. The weirdest thing is that **the slowdown affects other attempts to access the underlying dataset**. If you try to iterate over the `tf.data.Dataset`, then interrupt execution, and then try to iterate over the original dataset, the original dataset is now also very slow! This is true even if the dataset format is not set to `tf` - the iteration is slow even though it's not calling TF at all!
There is a simple workaround for this - we can simply get our data collators to return `np` tensors. When we do this, the bug is never triggered and everything is fine. In general, `np` is preferred for this kind of preprocessing work anyway, when the preprocessing is not going to be compiled into a pure `tf.data` pipeline! However, the issue is fascinating, and the TF team were wondering if anyone in datasets (cc @lhoestq @mariosasko) might have an idea of what could cause this.
### Steps to reproduce the bug
Run the attached Colab.
### Expected behavior
The slowdown should go away, or at least not persist after we stop iterating over the `tf.data.Dataset`
### Environment info
The issue occurs on multiple versions of Python and TF, both on local machines and on Colab.
All testing was done using the latest versions of `transformers` and `datasets` from `main`
Update: MP isn't multiprocessing at all, it's an internal PIL method for loading metadata from JPEG files. No idea why that would be a bottleneck, but I'll see if a Python profiler can't figure out where the time is actually being spent. | [
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https://github.com/huggingface/datasets/issues/5450 | to_tf_dataset with a TF collator causes bizarrely persistent slowdown | After further profiling, the slowdown is in the C methods for JPEG decoding that are included as part of PIL. Because Python profilers can't inspect inside that, I don't have any further information on which lines exactly are responsible for the slowdown or why.
In the meantime, I'm going to suggest switching from `return_tensors="tf"` to `return_tensors="np"` in most of our `transformers` code - this generally works better for pre-processing. Two relevant PRs are [here](https://github.com/huggingface/transformers/pull/21266) and [here](https://github.com/huggingface/notebooks/pull/308). | ### Describe the bug
This will make more sense if you take a look at [a Colab notebook that reproduces this issue.](https://colab.research.google.com/drive/1rxyeciQFWJTI0WrZ5aojp4Ls1ut18fNH?usp=sharing)
Briefly, there are several datasets that, when you iterate over them with `to_tf_dataset` **and** a data collator that returns `tf` tensors, become very slow. We haven't been able to figure this one out - it can be intermittent, and we have no idea what could possibly cause it. The weirdest thing is that **the slowdown affects other attempts to access the underlying dataset**. If you try to iterate over the `tf.data.Dataset`, then interrupt execution, and then try to iterate over the original dataset, the original dataset is now also very slow! This is true even if the dataset format is not set to `tf` - the iteration is slow even though it's not calling TF at all!
There is a simple workaround for this - we can simply get our data collators to return `np` tensors. When we do this, the bug is never triggered and everything is fine. In general, `np` is preferred for this kind of preprocessing work anyway, when the preprocessing is not going to be compiled into a pure `tf.data` pipeline! However, the issue is fascinating, and the TF team were wondering if anyone in datasets (cc @lhoestq @mariosasko) might have an idea of what could cause this.
### Steps to reproduce the bug
Run the attached Colab.
### Expected behavior
The slowdown should go away, or at least not persist after we stop iterating over the `tf.data.Dataset`
### Environment info
The issue occurs on multiple versions of Python and TF, both on local machines and on Colab.
All testing was done using the latest versions of `transformers` and `datasets` from `main` | 332 | 76 | to_tf_dataset with a TF collator causes bizarrely persistent slowdown
### Describe the bug
This will make more sense if you take a look at [a Colab notebook that reproduces this issue.](https://colab.research.google.com/drive/1rxyeciQFWJTI0WrZ5aojp4Ls1ut18fNH?usp=sharing)
Briefly, there are several datasets that, when you iterate over them with `to_tf_dataset` **and** a data collator that returns `tf` tensors, become very slow. We haven't been able to figure this one out - it can be intermittent, and we have no idea what could possibly cause it. The weirdest thing is that **the slowdown affects other attempts to access the underlying dataset**. If you try to iterate over the `tf.data.Dataset`, then interrupt execution, and then try to iterate over the original dataset, the original dataset is now also very slow! This is true even if the dataset format is not set to `tf` - the iteration is slow even though it's not calling TF at all!
There is a simple workaround for this - we can simply get our data collators to return `np` tensors. When we do this, the bug is never triggered and everything is fine. In general, `np` is preferred for this kind of preprocessing work anyway, when the preprocessing is not going to be compiled into a pure `tf.data` pipeline! However, the issue is fascinating, and the TF team were wondering if anyone in datasets (cc @lhoestq @mariosasko) might have an idea of what could cause this.
### Steps to reproduce the bug
Run the attached Colab.
### Expected behavior
The slowdown should go away, or at least not persist after we stop iterating over the `tf.data.Dataset`
### Environment info
The issue occurs on multiple versions of Python and TF, both on local machines and on Colab.
All testing was done using the latest versions of `transformers` and `datasets` from `main`
After further profiling, the slowdown is in the C methods for JPEG decoding that are included as part of PIL. Because Python profilers can't inspect inside that, I don't have any further information on which lines exactly are responsible for the slowdown or why.
In the meantime, I'm going to suggest switching from `return_tensors="tf"` to `return_tensors="np"` in most of our `transformers` code - this generally works better for pre-processing. Two relevant PRs are [here](https://github.com/huggingface/transformers/pull/21266) and [here](https://github.com/huggingface/notebooks/pull/308). | [
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https://github.com/huggingface/datasets/issues/5444 | info messages logged as warnings | Looks like a duplicate of https://github.com/huggingface/datasets/issues/1948.
I also think these should be logged as INFO messages, but let's see what @lhoestq thinks. | ### Describe the bug
Code in `datasets` is using `logger.warning` when it should be using `logger.info`.
Some of these are probably a matter of opinion, but I think anything starting with `logger.warning(f"Loading chached` clearly falls into the info category.
Definitions from the Python docs for reference:
* INFO: Confirmation that things are working as expected.
* WARNING: An indication that something unexpected happened, or indicative of some problem in the near future (e.g. ‘disk space low’). The software is still working as expected.
In theory, a user should be able to resolve things such that there are no warnings.
### Steps to reproduce the bug
Load any dataset that's already cached.
### Expected behavior
No output when log level is at the default WARNING level.
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 9.0.0
- Pandas version: 1.5.2 | 333 | 22 | info messages logged as warnings
### Describe the bug
Code in `datasets` is using `logger.warning` when it should be using `logger.info`.
Some of these are probably a matter of opinion, but I think anything starting with `logger.warning(f"Loading chached` clearly falls into the info category.
Definitions from the Python docs for reference:
* INFO: Confirmation that things are working as expected.
* WARNING: An indication that something unexpected happened, or indicative of some problem in the near future (e.g. ‘disk space low’). The software is still working as expected.
In theory, a user should be able to resolve things such that there are no warnings.
### Steps to reproduce the bug
Load any dataset that's already cached.
### Expected behavior
No output when log level is at the default WARNING level.
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 9.0.0
- Pandas version: 1.5.2
Looks like a duplicate of https://github.com/huggingface/datasets/issues/1948.
I also think these should be logged as INFO messages, but let's see what @lhoestq thinks. | [
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https://github.com/huggingface/datasets/issues/5444 | info messages logged as warnings | It can be considered unexpected to see a `map` function return instantaneously. The warning is here to explain this case by mentioning that the cache was used. I don't expect first time users (only seeing warnings) to guess that the cache works this way | ### Describe the bug
Code in `datasets` is using `logger.warning` when it should be using `logger.info`.
Some of these are probably a matter of opinion, but I think anything starting with `logger.warning(f"Loading chached` clearly falls into the info category.
Definitions from the Python docs for reference:
* INFO: Confirmation that things are working as expected.
* WARNING: An indication that something unexpected happened, or indicative of some problem in the near future (e.g. ‘disk space low’). The software is still working as expected.
In theory, a user should be able to resolve things such that there are no warnings.
### Steps to reproduce the bug
Load any dataset that's already cached.
### Expected behavior
No output when log level is at the default WARNING level.
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 9.0.0
- Pandas version: 1.5.2 | 333 | 44 | info messages logged as warnings
### Describe the bug
Code in `datasets` is using `logger.warning` when it should be using `logger.info`.
Some of these are probably a matter of opinion, but I think anything starting with `logger.warning(f"Loading chached` clearly falls into the info category.
Definitions from the Python docs for reference:
* INFO: Confirmation that things are working as expected.
* WARNING: An indication that something unexpected happened, or indicative of some problem in the near future (e.g. ‘disk space low’). The software is still working as expected.
In theory, a user should be able to resolve things such that there are no warnings.
### Steps to reproduce the bug
Load any dataset that's already cached.
### Expected behavior
No output when log level is at the default WARNING level.
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 9.0.0
- Pandas version: 1.5.2
It can be considered unexpected to see a `map` function return instantaneously. The warning is here to explain this case by mentioning that the cache was used. I don't expect first time users (only seeing warnings) to guess that the cache works this way | [
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https://github.com/huggingface/datasets/issues/5444 | info messages logged as warnings | Oh, so it's intentional? Do all Hugging Face packages use `warning` when using cache?
I guess feel free to close this issue then. | ### Describe the bug
Code in `datasets` is using `logger.warning` when it should be using `logger.info`.
Some of these are probably a matter of opinion, but I think anything starting with `logger.warning(f"Loading chached` clearly falls into the info category.
Definitions from the Python docs for reference:
* INFO: Confirmation that things are working as expected.
* WARNING: An indication that something unexpected happened, or indicative of some problem in the near future (e.g. ‘disk space low’). The software is still working as expected.
In theory, a user should be able to resolve things such that there are no warnings.
### Steps to reproduce the bug
Load any dataset that's already cached.
### Expected behavior
No output when log level is at the default WARNING level.
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 9.0.0
- Pandas version: 1.5.2 | 333 | 23 | info messages logged as warnings
### Describe the bug
Code in `datasets` is using `logger.warning` when it should be using `logger.info`.
Some of these are probably a matter of opinion, but I think anything starting with `logger.warning(f"Loading chached` clearly falls into the info category.
Definitions from the Python docs for reference:
* INFO: Confirmation that things are working as expected.
* WARNING: An indication that something unexpected happened, or indicative of some problem in the near future (e.g. ‘disk space low’). The software is still working as expected.
In theory, a user should be able to resolve things such that there are no warnings.
### Steps to reproduce the bug
Load any dataset that's already cached.
### Expected behavior
No output when log level is at the default WARNING level.
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 9.0.0
- Pandas version: 1.5.2
Oh, so it's intentional? Do all Hugging Face packages use `warning` when using cache?
I guess feel free to close this issue then. | [
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https://github.com/huggingface/datasets/issues/5444 | info messages logged as warnings | Yes it's intentional for `map`. For `load_dataset` it's also intentional but for a different reason: it shows where in the cache the dataset is located, in case the user wants to clear the cache. | ### Describe the bug
Code in `datasets` is using `logger.warning` when it should be using `logger.info`.
Some of these are probably a matter of opinion, but I think anything starting with `logger.warning(f"Loading chached` clearly falls into the info category.
Definitions from the Python docs for reference:
* INFO: Confirmation that things are working as expected.
* WARNING: An indication that something unexpected happened, or indicative of some problem in the near future (e.g. ‘disk space low’). The software is still working as expected.
In theory, a user should be able to resolve things such that there are no warnings.
### Steps to reproduce the bug
Load any dataset that's already cached.
### Expected behavior
No output when log level is at the default WARNING level.
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 9.0.0
- Pandas version: 1.5.2 | 333 | 34 | info messages logged as warnings
### Describe the bug
Code in `datasets` is using `logger.warning` when it should be using `logger.info`.
Some of these are probably a matter of opinion, but I think anything starting with `logger.warning(f"Loading chached` clearly falls into the info category.
Definitions from the Python docs for reference:
* INFO: Confirmation that things are working as expected.
* WARNING: An indication that something unexpected happened, or indicative of some problem in the near future (e.g. ‘disk space low’). The software is still working as expected.
In theory, a user should be able to resolve things such that there are no warnings.
### Steps to reproduce the bug
Load any dataset that's already cached.
### Expected behavior
No output when log level is at the default WARNING level.
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 9.0.0
- Pandas version: 1.5.2
Yes it's intentional for `map`. For `load_dataset` it's also intentional but for a different reason: it shows where in the cache the dataset is located, in case the user wants to clear the cache. | [
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https://github.com/huggingface/datasets/issues/5444 | info messages logged as warnings | OK I see. It's surprising to me that these are considered "something unexpected happened", the concept of cache is pretty common.
Has a user every actually complained that they ran their code once, and it took a minute while the data downloaded, then ran their code again and it ran really fast (and completed successfully) but they were so baffled by the fact that it ran quickly, _and_ didn't set the log level to INFO, _and_ hadn't read the docs (or thought about it) to know that datasets are cached, that they logged an issue asking that this information be output as a warning every time they run their code?
That seems like a very niche scenario to cater for, given that the side effect is to flood the console with irrelevant warnings for every other user every other time they run a bit of `datasets` code. And the real world impact is that people TURN OFF warnings, which is a pretty bad habit to get into.
Anyhoo, if there's no chance I'm going to change your mind, please close the issue :) | ### Describe the bug
Code in `datasets` is using `logger.warning` when it should be using `logger.info`.
Some of these are probably a matter of opinion, but I think anything starting with `logger.warning(f"Loading chached` clearly falls into the info category.
Definitions from the Python docs for reference:
* INFO: Confirmation that things are working as expected.
* WARNING: An indication that something unexpected happened, or indicative of some problem in the near future (e.g. ‘disk space low’). The software is still working as expected.
In theory, a user should be able to resolve things such that there are no warnings.
### Steps to reproduce the bug
Load any dataset that's already cached.
### Expected behavior
No output when log level is at the default WARNING level.
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 9.0.0
- Pandas version: 1.5.2 | 333 | 183 | info messages logged as warnings
### Describe the bug
Code in `datasets` is using `logger.warning` when it should be using `logger.info`.
Some of these are probably a matter of opinion, but I think anything starting with `logger.warning(f"Loading chached` clearly falls into the info category.
Definitions from the Python docs for reference:
* INFO: Confirmation that things are working as expected.
* WARNING: An indication that something unexpected happened, or indicative of some problem in the near future (e.g. ‘disk space low’). The software is still working as expected.
In theory, a user should be able to resolve things such that there are no warnings.
### Steps to reproduce the bug
Load any dataset that's already cached.
### Expected behavior
No output when log level is at the default WARNING level.
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 9.0.0
- Pandas version: 1.5.2
OK I see. It's surprising to me that these are considered "something unexpected happened", the concept of cache is pretty common.
Has a user every actually complained that they ran their code once, and it took a minute while the data downloaded, then ran their code again and it ran really fast (and completed successfully) but they were so baffled by the fact that it ran quickly, _and_ didn't set the log level to INFO, _and_ hadn't read the docs (or thought about it) to know that datasets are cached, that they logged an issue asking that this information be output as a warning every time they run their code?
That seems like a very niche scenario to cater for, given that the side effect is to flood the console with irrelevant warnings for every other user every other time they run a bit of `datasets` code. And the real world impact is that people TURN OFF warnings, which is a pretty bad habit to get into.
Anyhoo, if there's no chance I'm going to change your mind, please close the issue :) | [
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https://github.com/huggingface/datasets/issues/5444 | info messages logged as warnings | I see your point and I'm not closed to switching to INFO, but I think those logs are important to make the library less opaque. I also just checked `transformers` scripts and they default to INFO which is nice. However for colab users the default is still WARNING iirc, and it counts as one of the main env where `datasets` is used.
We also use progress bars a lot in `datasets`, that are shown if the logger is at the WARNING level. But we offer a function to disable the progress bars if necessary. | ### Describe the bug
Code in `datasets` is using `logger.warning` when it should be using `logger.info`.
Some of these are probably a matter of opinion, but I think anything starting with `logger.warning(f"Loading chached` clearly falls into the info category.
Definitions from the Python docs for reference:
* INFO: Confirmation that things are working as expected.
* WARNING: An indication that something unexpected happened, or indicative of some problem in the near future (e.g. ‘disk space low’). The software is still working as expected.
In theory, a user should be able to resolve things such that there are no warnings.
### Steps to reproduce the bug
Load any dataset that's already cached.
### Expected behavior
No output when log level is at the default WARNING level.
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 9.0.0
- Pandas version: 1.5.2 | 333 | 94 | info messages logged as warnings
### Describe the bug
Code in `datasets` is using `logger.warning` when it should be using `logger.info`.
Some of these are probably a matter of opinion, but I think anything starting with `logger.warning(f"Loading chached` clearly falls into the info category.
Definitions from the Python docs for reference:
* INFO: Confirmation that things are working as expected.
* WARNING: An indication that something unexpected happened, or indicative of some problem in the near future (e.g. ‘disk space low’). The software is still working as expected.
In theory, a user should be able to resolve things such that there are no warnings.
### Steps to reproduce the bug
Load any dataset that's already cached.
### Expected behavior
No output when log level is at the default WARNING level.
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 9.0.0
- Pandas version: 1.5.2
I see your point and I'm not closed to switching to INFO, but I think those logs are important to make the library less opaque. I also just checked `transformers` scripts and they default to INFO which is nice. However for colab users the default is still WARNING iirc, and it counts as one of the main env where `datasets` is used.
We also use progress bars a lot in `datasets`, that are shown if the logger is at the WARNING level. But we offer a function to disable the progress bars if necessary. | [
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https://github.com/huggingface/datasets/issues/5444 | info messages logged as warnings | These kinds of messages are logged as INFO in Transformers, so we should probably be consistent with them | ### Describe the bug
Code in `datasets` is using `logger.warning` when it should be using `logger.info`.
Some of these are probably a matter of opinion, but I think anything starting with `logger.warning(f"Loading chached` clearly falls into the info category.
Definitions from the Python docs for reference:
* INFO: Confirmation that things are working as expected.
* WARNING: An indication that something unexpected happened, or indicative of some problem in the near future (e.g. ‘disk space low’). The software is still working as expected.
In theory, a user should be able to resolve things such that there are no warnings.
### Steps to reproduce the bug
Load any dataset that's already cached.
### Expected behavior
No output when log level is at the default WARNING level.
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 9.0.0
- Pandas version: 1.5.2 | 333 | 18 | info messages logged as warnings
### Describe the bug
Code in `datasets` is using `logger.warning` when it should be using `logger.info`.
Some of these are probably a matter of opinion, but I think anything starting with `logger.warning(f"Loading chached` clearly falls into the info category.
Definitions from the Python docs for reference:
* INFO: Confirmation that things are working as expected.
* WARNING: An indication that something unexpected happened, or indicative of some problem in the near future (e.g. ‘disk space low’). The software is still working as expected.
In theory, a user should be able to resolve things such that there are no warnings.
### Steps to reproduce the bug
Load any dataset that's already cached.
### Expected behavior
No output when log level is at the default WARNING level.
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 9.0.0
- Pandas version: 1.5.2
These kinds of messages are logged as INFO in Transformers, so we should probably be consistent with them | [
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] |
https://github.com/huggingface/datasets/issues/5442 | OneDrive Integrations with HF Datasets | Hi!
We use [`fsspec`](https://github.com/fsspec/filesystem_spec) to integrate with storage providers. You can find more info (and the usage examples) in [our docs](https://huggingface.co/docs/datasets/v2.8.0/filesystems#download-and-prepare-a-dataset-into-a-cloud-storage).
[`gdrivefs`](https://github.com/fsspec/gdrivefs) makes it possible to use Google Drive as a storage service in Datasets, but this is not the case for OneDrive, since its[ Python SDK](https://github.com/OneDrive/onedrive-sdk-python) is not integrated with `fsspec`. Can you please request the integration with `fsspec` in their repo to address this limitation? | ### Feature request
First of all , I would like to thank all community who are developed DataSet storage and make it free available
How to integrate our Onedrive account or any other possible storage clouds (like google drive,...) with the **HF** datasets section.
For example, if I have **50GB** on my **Onedrive** account and I want to move between drive and Hugging face repo or vis versa
### Motivation
make the dataset section more flexible with other possible storage
like the integration between Google Collab and Google drive the storage
### Your contribution
Can be done using Hugging face CLI | 334 | 67 | OneDrive Integrations with HF Datasets
### Feature request
First of all , I would like to thank all community who are developed DataSet storage and make it free available
How to integrate our Onedrive account or any other possible storage clouds (like google drive,...) with the **HF** datasets section.
For example, if I have **50GB** on my **Onedrive** account and I want to move between drive and Hugging face repo or vis versa
### Motivation
make the dataset section more flexible with other possible storage
like the integration between Google Collab and Google drive the storage
### Your contribution
Can be done using Hugging face CLI
Hi!
We use [`fsspec`](https://github.com/fsspec/filesystem_spec) to integrate with storage providers. You can find more info (and the usage examples) in [our docs](https://huggingface.co/docs/datasets/v2.8.0/filesystems#download-and-prepare-a-dataset-into-a-cloud-storage).
[`gdrivefs`](https://github.com/fsspec/gdrivefs) makes it possible to use Google Drive as a storage service in Datasets, but this is not the case for OneDrive, since its[ Python SDK](https://github.com/OneDrive/onedrive-sdk-python) is not integrated with `fsspec`. Can you please request the integration with `fsspec` in their repo to address this limitation? | [
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