JuIm/Biological_Process · Datasets at Hugging Face

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maturation of SSU-rRNA protein modification process ribosome biogenesis
coenzyme A metabolic process polyamine catabolic process spermidine catabolic process spermine catabolic process
fatty acid biosynthetic process monounsaturated fatty acid biosynthetic process
metabolic process
alanine biosynthetic process D-alanine biosynthetic process DNA damage response L-alanine biosynthetic process from pyruvate response to antibiotic
asparagine catabolic process via L-aspartate protein homotetramerization
aerotaxis chemotaxis establishment of localization in cell positive regulation of post-translational protein modification signal transduction
negative regulation of DNA replication regulation of DNA-templated transcription regulation of gene expression response to starvation
negative regulation of termination of DNA-templated transcription regulation of gene expression transcription antitermination
bacterial-type DNA replication DNA damage response DNA strand elongation involved in DNA replication DNA-templated DNA replication error-prone translesion synthesis negative regulation of DNA-templated DNA replication initiation regulation of DNA-templated DNA replication initiation
glycolytic process
fructose 1,6-bisphosphate metabolic process fructose 6-phosphate metabolic process fructose metabolic process gluconeogenesis sucrose biosynthetic process
cellular response to iron ion DNA damage response intracellular sequestering of iron ion iron ion transport response to oxidative stress
cell division division septum assembly FtsZ-dependent cytokinesis protein polymerization
negative regulation of DNA-templated transcription negative regulation of siderophore biosynthetic process positive regulation of DNA-templated transcription
glucose metabolic process glycolytic process
glucose metabolic process pyridoxal phosphate biosynthetic process pyridoxine biosynthetic process
ammonia assimilation cycle glutamine biosynthetic process nitrogen utilization response to radiation
fructose 1,6-bisphosphate metabolic process gluconeogenesis glycerol metabolic process
response to hydrogen peroxide
diaminopimelate biosynthetic process lysine biosynthetic process lysine biosynthetic process via diaminopimelate
arabinose catabolic process
anaerobic respiration positive regulation of DNA-templated transcription regulation of DNA-templated transcription response to nitric oxide
DNA-templated transcription positive regulation of DNA-templated transcription
glyoxylate cycle tricarboxylic acid cycle
molybdate ion transport negative regulation of DNA-templated transcription negative regulation of DNA-templated transcription initiation positive regulation of DNA-templated transcription
lysine catabolic process
fatty acid biosynthetic process lipid modification methylation
bacterial-type flagellum-dependent swarming motility chemotaxis regulation of bacterial-type flagellum-dependent cell motility regulation of chemotaxis
cell cycle cell division maturation of SSU-rRNA rRNA processing tRNA processing
pantothenate biosynthetic process
D-ribose catabolic process
chorismate metabolic process L-phenylalanine biosynthetic process tyrosine biosynthetic process
cellular response to antibiotic cellular response to heat cellular response to pH cellular response to phosphate starvation cellular response to starvation intracellular phosphate ion homeostasis negative regulation of gene expression negative regulation of ion transmembrane transporter activity negative regulation of phosphate metabolic process negative regulation of phosphate transmembrane transport phosphate ion transport regulation of cell growth
protein maturation protein maturation by protein folding protein refolding protein stabilization response to heat
chaperone-mediated protein folding
cellular response to heat protein quality control for misfolded or incompletely synthesized proteins proteolysis response to heat response to X-ray
GMP salvage guanine salvage hypoxanthine metabolic process IMP salvage protein homotetramerization purine ribonucleoside salvage
GMP salvage IMP salvage protein homotetramerization purine ribonucleoside salvage XMP salvage
acetate biosynthetic process acetate catabolic process acetate metabolic process acetyl-CoA biosynthetic process from acetate L-threonine catabolic process to propionate
DNA damage response glucose metabolic process protein maturation
2'-deoxyribonucleotide biosynthetic process nucleobase-containing small molecule interconversion
2-oxoglutarate metabolic process glycine decarboxylation via glycine cleavage system glycolytic process one-carbon metabolic process pyruvate catabolic process pyruvate metabolic process response to oxidative stress tricarboxylic acid cycle
cell redox homeostasis removal of superoxide radicals
cellular response to cold mRNA stabilization positive regulation of translation response to cold response to radiation RNA catabolic process
negative regulation of DNA-templated transcription phosphorelay signal transduction system positive regulation of DNA-templated transcription regulation of DNA-templated transcription
fatty acid biosynthetic process long-chain fatty acid biosynthetic process malonyl-CoA biosynthetic process negative regulation of translation
carbon utilization ethanol biosynthetic process mixed acid fermentation protein homooligomerization response to oxidative stress
de novo' L-methionine biosynthetic process diaminopimelate biosynthetic process DNA damage response homoserine biosynthetic process isoleucine biosynthetic process lysine biosynthetic process via diaminopimelate threonine biosynthetic process
electron transport chain iron-sulfur cluster assembly P450-containing electron transport chain
cell division division septum assembly FtsZ-dependent cytokinesis peptidoglycan turnover positive regulation of cell division response to antibiotic transmembrane transport
glycol catabolic process L-fucose catabolic process propanediol metabolic process rhamnose catabolic process
anaerobic glycerol catabolic process methylglyoxal catabolic process protein homotetramerization
branched-chain amino acid transport D-alanine transport isoleucine transmembrane transport L-alanine transport L-isoleucine import across plasma membrane L-valine import across plasma membrane L-valine transmembrane transport phenylalanine transport
L-serine biosynthetic process
Gram-negative-bacterium-type cell outer membrane assembly lipopolysaccharide transport transmembrane transport
6-sulfoquinovose(1-) catabolic process 6-sulfoquinovose(1-) catabolic process to glycerone phosphate and 3-sulfolactaldehyde protein homotetramerization toxin catabolic process
negative regulation of translational elongation translation
cell morphogenesis FtsZ-dependent cytokinesis negative regulation of cell division peptidoglycan biosynthetic process regulation of cell shape regulation of chromosome segregation
negative regulation of termination of DNA-templated transcription positive regulation of DNA-templated transcription regulation of gene expression response to cold
cellular response to heat negative regulation of termination of DNA-templated transcription regulation of gene expression
regulation of fatty acid biosynthetic process regulation of nitrogen utilization
phosphoenolpyruvate-dependent sugar phosphotransferase system positive regulation of glycogen catabolic process regulation of carbon utilization
cytoplasmic translation negative regulation of translation
phosphorelay signal transduction system positive regulation of DNA-templated transcription regulation of DNA-templated transcription
cell redox homeostasis
enzyme-directed rRNA pseudouridine synthesis RNA modification tRNA metabolic process tRNA processing tRNA pseudouridine synthesis
enzyme-directed rRNA pseudouridine synthesis
amino acid transport cell motility putrescine transport
D-galactonate catabolic process D-galactonate transmembrane transport
hexuronate transmembrane transport
cardiolipin biosynthetic process
cell adhesion involved in single-species biofilm formation negative regulation of bacterial-type flagellum-dependent cell motility response to oxygen levels
cell wall organization cellular response to nutrient signal transduction
iron-sulfur cluster assembly protein maturation by iron-sulfur cluster transfer
L-serine transport
amino acid transport L-serine transport threonine transport
beta-alanine transport D-alanine transport D-serine transport glycine transport L-alanine transport
cadaverine transport cellular stress response to acidic pH L-lysine transmembrane transport
putrescine transport
dipeptide transport heme transmembrane transport protein transport
phosphate ion transmembrane transport phosphate ion transport
peptide transport potassium ion transmembrane transport putrescine transport
protein catabolic process proteolysis
fatty acid biosynthetic process fatty acid elongation, saturated fatty acid monounsaturated fatty acid biosynthetic process response to cold
anaerobic electron transport chain anaerobic respiration cellular response to starvation fermentation hydrogen metabolic process
protein maturation protein maturation by nickel ion transfer protein-containing complex assembly
aminoacyl-tRNA metabolism involved in translational fidelity response to X-ray translation
cellular response to cell envelope stress response to antibiotic xenobiotic detoxification by transmembrane export across the plasma membrane
cell wall organization peptidoglycan-protein cross-linking regulation of cell shape
DNA recombination DNA synthesis involved in DNA repair DNA-templated DNA replication protein homotetramerization
peptidoglycan biosynthetic process regulation of cell shape
lipopolysaccharide metabolic process regulation of lipid biosynthetic process
gluconeogenesis glycolytic process
carbohydrate metabolic process D-tagatose 6-phosphate catabolic process protein homotetramerization
biosynthetic process L-threonine catabolic process to glycine
aspartate biosynthetic process isoleucine biosynthetic process leucine biosynthetic process valine biosynthetic process
D-arabinose catabolic process L-fucose catabolic process pentose catabolic process
de novo' AMP biosynthetic process 'de novo' IMP biosynthetic process DNA damage response
amino acid biosynthetic process aromatic amino acid family biosynthetic process chorismate biosynthetic process

maturation of SSU-rRNA protein modification process ribosome biogenesis

coenzyme A metabolic process polyamine catabolic process spermidine catabolic process spermine catabolic process

fatty acid biosynthetic process monounsaturated fatty acid biosynthetic process

metabolic process

alanine biosynthetic process D-alanine biosynthetic process DNA damage response L-alanine biosynthetic process from pyruvate response to antibiotic

asparagine catabolic process via L-aspartate protein homotetramerization

aerotaxis chemotaxis establishment of localization in cell positive regulation of post-translational protein modification signal transduction

negative regulation of DNA replication regulation of DNA-templated transcription regulation of gene expression response to starvation

negative regulation of termination of DNA-templated transcription regulation of gene expression transcription antitermination

bacterial-type DNA replication DNA damage response DNA strand elongation involved in DNA replication DNA-templated DNA replication error-prone translesion synthesis negative regulation of DNA-templated DNA replication initiation regulation of DNA-templated DNA replication initiation

glycolytic process

fructose 1,6-bisphosphate metabolic process fructose 6-phosphate metabolic process fructose metabolic process gluconeogenesis sucrose biosynthetic process

cellular response to iron ion DNA damage response intracellular sequestering of iron ion iron ion transport response to oxidative stress

cell division division septum assembly FtsZ-dependent cytokinesis protein polymerization

negative regulation of DNA-templated transcription negative regulation of siderophore biosynthetic process positive regulation of DNA-templated transcription

glucose metabolic process glycolytic process

glucose metabolic process pyridoxal phosphate biosynthetic process pyridoxine biosynthetic process

ammonia assimilation cycle glutamine biosynthetic process nitrogen utilization response to radiation

fructose 1,6-bisphosphate metabolic process gluconeogenesis glycerol metabolic process

response to hydrogen peroxide

diaminopimelate biosynthetic process lysine biosynthetic process lysine biosynthetic process via diaminopimelate

arabinose catabolic process

anaerobic respiration positive regulation of DNA-templated transcription regulation of DNA-templated transcription response to nitric oxide

DNA-templated transcription positive regulation of DNA-templated transcription

glyoxylate cycle tricarboxylic acid cycle

molybdate ion transport negative regulation of DNA-templated transcription negative regulation of DNA-templated transcription initiation positive regulation of DNA-templated transcription

lysine catabolic process

fatty acid biosynthetic process lipid modification methylation

bacterial-type flagellum-dependent swarming motility chemotaxis regulation of bacterial-type flagellum-dependent cell motility regulation of chemotaxis

cell cycle cell division maturation of SSU-rRNA rRNA processing tRNA processing

pantothenate biosynthetic process

D-ribose catabolic process

chorismate metabolic process L-phenylalanine biosynthetic process tyrosine biosynthetic process

cellular response to antibiotic cellular response to heat cellular response to pH cellular response to phosphate starvation cellular response to starvation intracellular phosphate ion homeostasis negative regulation of gene expression negative regulation of ion transmembrane transporter activity negative regulation of phosphate metabolic process negative regulation of phosphate transmembrane transport phosphate ion transport regulation of cell growth

protein maturation protein maturation by protein folding protein refolding protein stabilization response to heat

chaperone-mediated protein folding

cellular response to heat protein quality control for misfolded or incompletely synthesized proteins proteolysis response to heat response to X-ray

GMP salvage guanine salvage hypoxanthine metabolic process IMP salvage protein homotetramerization purine ribonucleoside salvage

GMP salvage IMP salvage protein homotetramerization purine ribonucleoside salvage XMP salvage

acetate biosynthetic process acetate catabolic process acetate metabolic process acetyl-CoA biosynthetic process from acetate L-threonine catabolic process to propionate

DNA damage response glucose metabolic process protein maturation

2'-deoxyribonucleotide biosynthetic process nucleobase-containing small molecule interconversion

2-oxoglutarate metabolic process glycine decarboxylation via glycine cleavage system glycolytic process one-carbon metabolic process pyruvate catabolic process pyruvate metabolic process response to oxidative stress tricarboxylic acid cycle

cell redox homeostasis removal of superoxide radicals

cellular response to cold mRNA stabilization positive regulation of translation response to cold response to radiation RNA catabolic process

negative regulation of DNA-templated transcription phosphorelay signal transduction system positive regulation of DNA-templated transcription regulation of DNA-templated transcription

fatty acid biosynthetic process long-chain fatty acid biosynthetic process malonyl-CoA biosynthetic process negative regulation of translation

carbon utilization ethanol biosynthetic process mixed acid fermentation protein homooligomerization response to oxidative stress

de novo' L-methionine biosynthetic process diaminopimelate biosynthetic process DNA damage response homoserine biosynthetic process isoleucine biosynthetic process lysine biosynthetic process via diaminopimelate threonine biosynthetic process

electron transport chain iron-sulfur cluster assembly P450-containing electron transport chain

cell division division septum assembly FtsZ-dependent cytokinesis peptidoglycan turnover positive regulation of cell division response to antibiotic transmembrane transport

glycol catabolic process L-fucose catabolic process propanediol metabolic process rhamnose catabolic process

anaerobic glycerol catabolic process methylglyoxal catabolic process protein homotetramerization

branched-chain amino acid transport D-alanine transport isoleucine transmembrane transport L-alanine transport L-isoleucine import across plasma membrane L-valine import across plasma membrane L-valine transmembrane transport phenylalanine transport

L-serine biosynthetic process

Gram-negative-bacterium-type cell outer membrane assembly lipopolysaccharide transport transmembrane transport

6-sulfoquinovose(1-) catabolic process 6-sulfoquinovose(1-) catabolic process to glycerone phosphate and 3-sulfolactaldehyde protein homotetramerization toxin catabolic process

negative regulation of translational elongation translation

cell morphogenesis FtsZ-dependent cytokinesis negative regulation of cell division peptidoglycan biosynthetic process regulation of cell shape regulation of chromosome segregation

negative regulation of termination of DNA-templated transcription positive regulation of DNA-templated transcription regulation of gene expression response to cold

cellular response to heat negative regulation of termination of DNA-templated transcription regulation of gene expression

regulation of fatty acid biosynthetic process regulation of nitrogen utilization

phosphoenolpyruvate-dependent sugar phosphotransferase system positive regulation of glycogen catabolic process regulation of carbon utilization

cytoplasmic translation negative regulation of translation

phosphorelay signal transduction system positive regulation of DNA-templated transcription regulation of DNA-templated transcription

cell redox homeostasis

enzyme-directed rRNA pseudouridine synthesis RNA modification tRNA metabolic process tRNA processing tRNA pseudouridine synthesis

enzyme-directed rRNA pseudouridine synthesis

amino acid transport cell motility putrescine transport

D-galactonate catabolic process D-galactonate transmembrane transport

hexuronate transmembrane transport

cardiolipin biosynthetic process

cell adhesion involved in single-species biofilm formation negative regulation of bacterial-type flagellum-dependent cell motility response to oxygen levels

cell wall organization cellular response to nutrient signal transduction

iron-sulfur cluster assembly protein maturation by iron-sulfur cluster transfer

L-serine transport

amino acid transport L-serine transport threonine transport

beta-alanine transport D-alanine transport D-serine transport glycine transport L-alanine transport

cadaverine transport cellular stress response to acidic pH L-lysine transmembrane transport

putrescine transport

dipeptide transport heme transmembrane transport protein transport

phosphate ion transmembrane transport phosphate ion transport

peptide transport potassium ion transmembrane transport putrescine transport

protein catabolic process proteolysis

fatty acid biosynthetic process fatty acid elongation, saturated fatty acid monounsaturated fatty acid biosynthetic process response to cold

anaerobic electron transport chain anaerobic respiration cellular response to starvation fermentation hydrogen metabolic process

protein maturation protein maturation by nickel ion transfer protein-containing complex assembly

aminoacyl-tRNA metabolism involved in translational fidelity response to X-ray translation

cellular response to cell envelope stress response to antibiotic xenobiotic detoxification by transmembrane export across the plasma membrane

cell wall organization peptidoglycan-protein cross-linking regulation of cell shape

DNA recombination DNA synthesis involved in DNA repair DNA-templated DNA replication protein homotetramerization

peptidoglycan biosynthetic process regulation of cell shape

lipopolysaccharide metabolic process regulation of lipid biosynthetic process

gluconeogenesis glycolytic process

carbohydrate metabolic process D-tagatose 6-phosphate catabolic process protein homotetramerization

biosynthetic process L-threonine catabolic process to glycine

aspartate biosynthetic process isoleucine biosynthetic process leucine biosynthetic process valine biosynthetic process

D-arabinose catabolic process L-fucose catabolic process pentose catabolic process

de novo' AMP biosynthetic process 'de novo' IMP biosynthetic process DNA damage response

amino acid biosynthetic process aromatic amino acid family biosynthetic process chorismate biosynthetic process