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https://github.com/huggingface/datasets/issues/1610 | shuffle does not accept seed | Hi Thomas
thanks for reponse, yes, I did checked it, but this does not work for me please see
```
(internship) rkarimi@italix17:/idiap/user/rkarimi/dev$ python
Python 3.7.9 (default, Aug 31 2020, 12:42:55)
[GCC 7.3.0] :: Anaconda, Inc. on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import datasets
2020-12-20 01:48:50.766004: W tensorflow/stream_executor/platform/default/dso_loader.cc:60] Could not load dynamic library 'libcudart.so.11.0'; dlerror: libcudart.so.11.0: cannot open shared object file: No such file or directory
2020-12-20 01:48:50.766029: I tensorflow/stream_executor/cuda/cudart_stub.cc:29] Ignore above cudart dlerror if you do not have a GPU set up on your machine.
>>> data = datasets.load_dataset("scitail", "snli_format")
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
Reusing dataset scitail (/idiap/temp/rkarimi/cache_home_1/datasets/scitail/snli_format/1.1.0/fd8ccdfc3134ce86eb4ef10ba7f21ee2a125c946e26bb1dd3625fe74f48d3b90)
>>> data.shuffle(seed=2)
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
TypeError: shuffle() got an unexpected keyword argument 'seed'
```
datasets version
`datasets 1.1.2 <pip>
`
| Hi
I need to shuffle the dataset, but this needs to be based on epoch+seed to be consistent across the cores, when I pass seed to shuffle, this does not accept seed, could you assist me with this? thanks @lhoestq
| 134 | shuffle does not accept seed
Hi
I need to shuffle the dataset, but this needs to be based on epoch+seed to be consistent across the cores, when I pass seed to shuffle, this does not accept seed, could you assist me with this? thanks @lhoestq
Hi Thomas
thanks for reponse, yes, I did checked it, but this does not work for me please see
```
(internship) rkarimi@italix17:/idiap/user/rkarimi/dev$ python
Python 3.7.9 (default, Aug 31 2020, 12:42:55)
[GCC 7.3.0] :: Anaconda, Inc. on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import datasets
2020-12-20 01:48:50.766004: W tensorflow/stream_executor/platform/default/dso_loader.cc:60] Could not load dynamic library 'libcudart.so.11.0'; dlerror: libcudart.so.11.0: cannot open shared object file: No such file or directory
2020-12-20 01:48:50.766029: I tensorflow/stream_executor/cuda/cudart_stub.cc:29] Ignore above cudart dlerror if you do not have a GPU set up on your machine.
>>> data = datasets.load_dataset("scitail", "snli_format")
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
Reusing dataset scitail (/idiap/temp/rkarimi/cache_home_1/datasets/scitail/snli_format/1.1.0/fd8ccdfc3134ce86eb4ef10ba7f21ee2a125c946e26bb1dd3625fe74f48d3b90)
>>> data.shuffle(seed=2)
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
TypeError: shuffle() got an unexpected keyword argument 'seed'
```
datasets version
`datasets 1.1.2 <pip>
`
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https://github.com/huggingface/datasets/issues/1610 | shuffle does not accept seed | Thanks for reporting !
Indeed it looks like an issue with `suffle` on `DatasetDict`. We're going to fix that.
In the meantime you can shuffle each split (train, validation, test) separately:
```python
shuffled_train_dataset = data["train"].shuffle(seed=42)
```
| Hi
I need to shuffle the dataset, but this needs to be based on epoch+seed to be consistent across the cores, when I pass seed to shuffle, this does not accept seed, could you assist me with this? thanks @lhoestq
| 36 | shuffle does not accept seed
Hi
I need to shuffle the dataset, but this needs to be based on epoch+seed to be consistent across the cores, when I pass seed to shuffle, this does not accept seed, could you assist me with this? thanks @lhoestq
Thanks for reporting !
Indeed it looks like an issue with `suffle` on `DatasetDict`. We're going to fix that.
In the meantime you can shuffle each split (train, validation, test) separately:
```python
shuffled_train_dataset = data["train"].shuffle(seed=42)
```
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https://github.com/huggingface/datasets/issues/1609 | Not able to use 'jigsaw_toxicity_pred' dataset | Hi @jassimran,
The `jigsaw_toxicity_pred` dataset has not been released yet, it will be available with version 2 of `datasets`, coming soon.
You can still access it by installing the master (unreleased) version of datasets directly :
`pip install git+https://github.com/huggingface/datasets.git@master`
Please let me know if this helps | When trying to use jigsaw_toxicity_pred dataset, like this in a [colab](https://colab.research.google.com/drive/1LwO2A5M2X5dvhkAFYE4D2CUT3WUdWnkn?usp=sharing):
```
from datasets import list_datasets, list_metrics, load_dataset, load_metric
ds = load_dataset("jigsaw_toxicity_pred")
```
I see below error:
> FileNotFoundError: Couldn't find file at https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/jigsaw_toxicity_pred/jigsaw_toxicity_pred.py
During handling of the above exception, another exception occurred:
FileNotFoundError Traceback (most recent call last)
FileNotFoundError: Couldn't find file at https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/jigsaw_toxicity_pred/jigsaw_toxicity_pred.py
During handling of the above exception, another exception occurred:
FileNotFoundError Traceback (most recent call last)
/usr/local/lib/python3.6/dist-packages/datasets/load.py in prepare_module(path, script_version, download_config, download_mode, dataset, force_local_path, **download_kwargs)
280 raise FileNotFoundError(
281 "Couldn't find file locally at {}, or remotely at {} or {}".format(
--> 282 combined_path, github_file_path, file_path
283 )
284 )
FileNotFoundError: Couldn't find file locally at jigsaw_toxicity_pred/jigsaw_toxicity_pred.py, or remotely at https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/jigsaw_toxicity_pred/jigsaw_toxicity_pred.py or https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/jigsaw_toxicity_pred/jigsaw_toxicity_pred.py | 46 | Not able to use 'jigsaw_toxicity_pred' dataset
When trying to use jigsaw_toxicity_pred dataset, like this in a [colab](https://colab.research.google.com/drive/1LwO2A5M2X5dvhkAFYE4D2CUT3WUdWnkn?usp=sharing):
```
from datasets import list_datasets, list_metrics, load_dataset, load_metric
ds = load_dataset("jigsaw_toxicity_pred")
```
I see below error:
> FileNotFoundError: Couldn't find file at https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/jigsaw_toxicity_pred/jigsaw_toxicity_pred.py
During handling of the above exception, another exception occurred:
FileNotFoundError Traceback (most recent call last)
FileNotFoundError: Couldn't find file at https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/jigsaw_toxicity_pred/jigsaw_toxicity_pred.py
During handling of the above exception, another exception occurred:
FileNotFoundError Traceback (most recent call last)
/usr/local/lib/python3.6/dist-packages/datasets/load.py in prepare_module(path, script_version, download_config, download_mode, dataset, force_local_path, **download_kwargs)
280 raise FileNotFoundError(
281 "Couldn't find file locally at {}, or remotely at {} or {}".format(
--> 282 combined_path, github_file_path, file_path
283 )
284 )
FileNotFoundError: Couldn't find file locally at jigsaw_toxicity_pred/jigsaw_toxicity_pred.py, or remotely at https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/jigsaw_toxicity_pred/jigsaw_toxicity_pred.py or https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/jigsaw_toxicity_pred/jigsaw_toxicity_pred.py
Hi @jassimran,
The `jigsaw_toxicity_pred` dataset has not been released yet, it will be available with version 2 of `datasets`, coming soon.
You can still access it by installing the master (unreleased) version of datasets directly :
`pip install git+https://github.com/huggingface/datasets.git@master`
Please let me know if this helps | [
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https://github.com/huggingface/datasets/issues/1600 | AttributeError: 'DatasetDict' object has no attribute 'train_test_split' | Hi @david-waterworth!
As indicated in the error message, `load_dataset("csv")` returns a `DatasetDict` object, which is mapping of `str` to `Dataset` objects. I believe in this case the behavior is to return a `train` split with all the data.
`train_test_split` is a method of the `Dataset` object, so you will need to do something like this:
```python
dataset_dict = load_dataset(`'csv', data_files='data.txt')
dataset = dataset_dict['split name, eg train']
dataset.train_test_split(test_size=0.1)
```
Please let me know if this helps. 🙂 | The following code fails with "'DatasetDict' object has no attribute 'train_test_split'" - am I doing something wrong?
```
from datasets import load_dataset
dataset = load_dataset('csv', data_files='data.txt')
dataset = dataset.train_test_split(test_size=0.1)
```
> AttributeError: 'DatasetDict' object has no attribute 'train_test_split' | 76 | AttributeError: 'DatasetDict' object has no attribute 'train_test_split'
The following code fails with "'DatasetDict' object has no attribute 'train_test_split'" - am I doing something wrong?
```
from datasets import load_dataset
dataset = load_dataset('csv', data_files='data.txt')
dataset = dataset.train_test_split(test_size=0.1)
```
> AttributeError: 'DatasetDict' object has no attribute 'train_test_split'
Hi @david-waterworth!
As indicated in the error message, `load_dataset("csv")` returns a `DatasetDict` object, which is mapping of `str` to `Dataset` objects. I believe in this case the behavior is to return a `train` split with all the data.
`train_test_split` is a method of the `Dataset` object, so you will need to do something like this:
```python
dataset_dict = load_dataset(`'csv', data_files='data.txt')
dataset = dataset_dict['split name, eg train']
dataset.train_test_split(test_size=0.1)
```
Please let me know if this helps. 🙂 | [
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https://github.com/huggingface/datasets/issues/1600 | AttributeError: 'DatasetDict' object has no attribute 'train_test_split' | Thanks, that's working - the same issue also tripped me up with training.
I also agree https://github.com/huggingface/datasets/issues/767 would be a useful addition. | The following code fails with "'DatasetDict' object has no attribute 'train_test_split'" - am I doing something wrong?
```
from datasets import load_dataset
dataset = load_dataset('csv', data_files='data.txt')
dataset = dataset.train_test_split(test_size=0.1)
```
> AttributeError: 'DatasetDict' object has no attribute 'train_test_split' | 22 | AttributeError: 'DatasetDict' object has no attribute 'train_test_split'
The following code fails with "'DatasetDict' object has no attribute 'train_test_split'" - am I doing something wrong?
```
from datasets import load_dataset
dataset = load_dataset('csv', data_files='data.txt')
dataset = dataset.train_test_split(test_size=0.1)
```
> AttributeError: 'DatasetDict' object has no attribute 'train_test_split'
Thanks, that's working - the same issue also tripped me up with training.
I also agree https://github.com/huggingface/datasets/issues/767 would be a useful addition. | [
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] |
https://github.com/huggingface/datasets/issues/1600 | AttributeError: 'DatasetDict' object has no attribute 'train_test_split' | > ```python
> dataset_dict = load_dataset(`'csv', data_files='data.txt')
> dataset = dataset_dict['split name, eg train']
> dataset.train_test_split(test_size=0.1)
> ```
I am getting error like
KeyError: 'split name, eg train'
Could you please tell me how to solve this? | The following code fails with "'DatasetDict' object has no attribute 'train_test_split'" - am I doing something wrong?
```
from datasets import load_dataset
dataset = load_dataset('csv', data_files='data.txt')
dataset = dataset.train_test_split(test_size=0.1)
```
> AttributeError: 'DatasetDict' object has no attribute 'train_test_split' | 37 | AttributeError: 'DatasetDict' object has no attribute 'train_test_split'
The following code fails with "'DatasetDict' object has no attribute 'train_test_split'" - am I doing something wrong?
```
from datasets import load_dataset
dataset = load_dataset('csv', data_files='data.txt')
dataset = dataset.train_test_split(test_size=0.1)
```
> AttributeError: 'DatasetDict' object has no attribute 'train_test_split'
> ```python
> dataset_dict = load_dataset(`'csv', data_files='data.txt')
> dataset = dataset_dict['split name, eg train']
> dataset.train_test_split(test_size=0.1)
> ```
I am getting error like
KeyError: 'split name, eg train'
Could you please tell me how to solve this? | [
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https://github.com/huggingface/datasets/issues/1594 | connection error | This happen quite often when they are too many concurrent requests to github.
i can understand it’s a bit cumbersome to handle on the user side. Maybe we should try a few times in the lib (eg with timeout) before failing, what do you think @lhoestq ? | Hi
I am hitting to this error, thanks
```
> Traceback (most recent call last):
File "finetune_t5_trainer.py", line 379, in <module>
main()
File "finetune_t5_trainer.py", line 208, in main
if training_args.do_eval or training_args.evaluation_strategy != EvaluationStrategy.NO
File "finetune_t5_trainer.py", line 207, in <dictcomp>
for task in data_args.eval_tasks}
File "/workdir/seq2seq/data/tasks.py", line 70, in get_dataset
dataset = self.load_dataset(split=split)
File "/workdir/seq2seq/data/tasks.py", line 66, in load_dataset
return datasets.load_dataset(self.task.name, split=split, script_version="master")
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 589, in load_dataset
path, script_version=script_version, download_config=download_config, download_mode=download_mode, dataset=True
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 267, in prepare_module
local_path = cached_path(file_path, download_config=download_config)
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 308, in cached_path
use_etag=download_config.use_etag,
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 487, in get_from_cache
raise ConnectionError("Couldn't reach {}".format(url))
ConnectionError: Couldn't reach https://raw.githubusercontent.com/huggingface/datasets/master/datasets/boolq/boolq.py
el/0 I1217 01:11:33.898849 354161 main shadow.py:210 Current job status: FINISHED
``` | 47 | connection error
Hi
I am hitting to this error, thanks
```
> Traceback (most recent call last):
File "finetune_t5_trainer.py", line 379, in <module>
main()
File "finetune_t5_trainer.py", line 208, in main
if training_args.do_eval or training_args.evaluation_strategy != EvaluationStrategy.NO
File "finetune_t5_trainer.py", line 207, in <dictcomp>
for task in data_args.eval_tasks}
File "/workdir/seq2seq/data/tasks.py", line 70, in get_dataset
dataset = self.load_dataset(split=split)
File "/workdir/seq2seq/data/tasks.py", line 66, in load_dataset
return datasets.load_dataset(self.task.name, split=split, script_version="master")
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 589, in load_dataset
path, script_version=script_version, download_config=download_config, download_mode=download_mode, dataset=True
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 267, in prepare_module
local_path = cached_path(file_path, download_config=download_config)
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 308, in cached_path
use_etag=download_config.use_etag,
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 487, in get_from_cache
raise ConnectionError("Couldn't reach {}".format(url))
ConnectionError: Couldn't reach https://raw.githubusercontent.com/huggingface/datasets/master/datasets/boolq/boolq.py
el/0 I1217 01:11:33.898849 354161 main shadow.py:210 Current job status: FINISHED
```
This happen quite often when they are too many concurrent requests to github.
i can understand it’s a bit cumbersome to handle on the user side. Maybe we should try a few times in the lib (eg with timeout) before failing, what do you think @lhoestq ? | [
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https://github.com/huggingface/datasets/issues/1594 | connection error | Hi @lhoestq thank you for the modification, I will use`script_version="master"` for now :), to my experience, also setting timeout to a larger number like 3*60 which I normally use helps a lot on this.
| Hi
I am hitting to this error, thanks
```
> Traceback (most recent call last):
File "finetune_t5_trainer.py", line 379, in <module>
main()
File "finetune_t5_trainer.py", line 208, in main
if training_args.do_eval or training_args.evaluation_strategy != EvaluationStrategy.NO
File "finetune_t5_trainer.py", line 207, in <dictcomp>
for task in data_args.eval_tasks}
File "/workdir/seq2seq/data/tasks.py", line 70, in get_dataset
dataset = self.load_dataset(split=split)
File "/workdir/seq2seq/data/tasks.py", line 66, in load_dataset
return datasets.load_dataset(self.task.name, split=split, script_version="master")
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 589, in load_dataset
path, script_version=script_version, download_config=download_config, download_mode=download_mode, dataset=True
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 267, in prepare_module
local_path = cached_path(file_path, download_config=download_config)
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 308, in cached_path
use_etag=download_config.use_etag,
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 487, in get_from_cache
raise ConnectionError("Couldn't reach {}".format(url))
ConnectionError: Couldn't reach https://raw.githubusercontent.com/huggingface/datasets/master/datasets/boolq/boolq.py
el/0 I1217 01:11:33.898849 354161 main shadow.py:210 Current job status: FINISHED
``` | 34 | connection error
Hi
I am hitting to this error, thanks
```
> Traceback (most recent call last):
File "finetune_t5_trainer.py", line 379, in <module>
main()
File "finetune_t5_trainer.py", line 208, in main
if training_args.do_eval or training_args.evaluation_strategy != EvaluationStrategy.NO
File "finetune_t5_trainer.py", line 207, in <dictcomp>
for task in data_args.eval_tasks}
File "/workdir/seq2seq/data/tasks.py", line 70, in get_dataset
dataset = self.load_dataset(split=split)
File "/workdir/seq2seq/data/tasks.py", line 66, in load_dataset
return datasets.load_dataset(self.task.name, split=split, script_version="master")
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 589, in load_dataset
path, script_version=script_version, download_config=download_config, download_mode=download_mode, dataset=True
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 267, in prepare_module
local_path = cached_path(file_path, download_config=download_config)
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 308, in cached_path
use_etag=download_config.use_etag,
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 487, in get_from_cache
raise ConnectionError("Couldn't reach {}".format(url))
ConnectionError: Couldn't reach https://raw.githubusercontent.com/huggingface/datasets/master/datasets/boolq/boolq.py
el/0 I1217 01:11:33.898849 354161 main shadow.py:210 Current job status: FINISHED
```
Hi @lhoestq thank you for the modification, I will use`script_version="master"` for now :), to my experience, also setting timeout to a larger number like 3*60 which I normally use helps a lot on this.
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https://github.com/huggingface/datasets/issues/1593 | Access to key in DatasetDict map | Indeed that would be cool
Also FYI right now the easiest way to do this is
```python
dataset_dict["train"] = dataset_dict["train"].map(my_transform_for_the_train_set)
dataset_dict["test"] = dataset_dict["test"].map(my_transform_for_the_test_set)
``` | It is possible that we want to do different things in the `map` function (and possibly other functions too) of a `DatasetDict`, depending on the key. I understand that `DatasetDict.map` is a really thin wrapper of `Dataset.map`, so it is easy to directly implement this functionality in the client code. Still, it'd be nice if there can be a flag, similar to `with_indices`, that allows the callable to know the key inside `DatasetDict`. | 24 | Access to key in DatasetDict map
It is possible that we want to do different things in the `map` function (and possibly other functions too) of a `DatasetDict`, depending on the key. I understand that `DatasetDict.map` is a really thin wrapper of `Dataset.map`, so it is easy to directly implement this functionality in the client code. Still, it'd be nice if there can be a flag, similar to `with_indices`, that allows the callable to know the key inside `DatasetDict`.
Indeed that would be cool
Also FYI right now the easiest way to do this is
```python
dataset_dict["train"] = dataset_dict["train"].map(my_transform_for_the_train_set)
dataset_dict["test"] = dataset_dict["test"].map(my_transform_for_the_test_set)
``` | [
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https://github.com/huggingface/datasets/issues/1591 | IWSLT-17 Link Broken | Sorry, this is a duplicate of #1287. Not sure why it didn't come up when I searched `iwslt` in the issues list. | ```
FileNotFoundError: Couldn't find file at https://wit3.fbk.eu/archive/2017-01-trnmted//texts/DeEnItNlRo/DeEnItNlRo/DeEnItNlRo-DeEnItNlRo.tgz
``` | 22 | IWSLT-17 Link Broken
```
FileNotFoundError: Couldn't find file at https://wit3.fbk.eu/archive/2017-01-trnmted//texts/DeEnItNlRo/DeEnItNlRo/DeEnItNlRo-DeEnItNlRo.tgz
```
Sorry, this is a duplicate of #1287. Not sure why it didn't come up when I searched `iwslt` in the issues list. | [
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] |
https://github.com/huggingface/datasets/issues/1590 | Add helper to resolve namespace collision | I was thinking about using something like [importlib](https://docs.python.org/3/library/importlib.html#importing-a-source-file-directly) to over-ride the collision.
**Reason requested**: I use the [following template](https://github.com/jramapuram/ml_base/) repo where I house all my datasets as a submodule. | Many projects use a module called `datasets`, however this is incompatible with huggingface datasets. It would be great if there if there was some helper or similar function to resolve such a common conflict. | 29 | Add helper to resolve namespace collision
Many projects use a module called `datasets`, however this is incompatible with huggingface datasets. It would be great if there if there was some helper or similar function to resolve such a common conflict.
I was thinking about using something like [importlib](https://docs.python.org/3/library/importlib.html#importing-a-source-file-directly) to over-ride the collision.
**Reason requested**: I use the [following template](https://github.com/jramapuram/ml_base/) repo where I house all my datasets as a submodule. | [
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https://github.com/huggingface/datasets/issues/1590 | Add helper to resolve namespace collision | Alternatively huggingface could consider some submodule type structure like:
`import huggingface.datasets`
`import huggingface.transformers`
`datasets` is a very common module in ML and should be an end-user decision and not scope all of python ¯\_(ツ)_/¯
| Many projects use a module called `datasets`, however this is incompatible with huggingface datasets. It would be great if there if there was some helper or similar function to resolve such a common conflict. | 34 | Add helper to resolve namespace collision
Many projects use a module called `datasets`, however this is incompatible with huggingface datasets. It would be great if there if there was some helper or similar function to resolve such a common conflict.
Alternatively huggingface could consider some submodule type structure like:
`import huggingface.datasets`
`import huggingface.transformers`
`datasets` is a very common module in ML and should be an end-user decision and not scope all of python ¯\_(ツ)_/¯
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https://github.com/huggingface/datasets/issues/1590 | Add helper to resolve namespace collision | It also wasn't initially obvious to me that the samples which contain `import datasets` were in fact importing a huggingface library (in fact all the huggingface imports are very generic - transformers, tokenizers, datasets...) | Many projects use a module called `datasets`, however this is incompatible with huggingface datasets. It would be great if there if there was some helper or similar function to resolve such a common conflict. | 34 | Add helper to resolve namespace collision
Many projects use a module called `datasets`, however this is incompatible with huggingface datasets. It would be great if there if there was some helper or similar function to resolve such a common conflict.
It also wasn't initially obvious to me that the samples which contain `import datasets` were in fact importing a huggingface library (in fact all the huggingface imports are very generic - transformers, tokenizers, datasets...) | [
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https://github.com/huggingface/datasets/issues/1585 | FileNotFoundError for `amazon_polarity` | Hi @phtephanx , the `amazon_polarity` dataset has not been released yet. It will be available in the coming soon v2of `datasets` :)
You can still access it now if you want, but you will need to install datasets via the master branch:
`pip install git+https://github.com/huggingface/datasets.git@master` | Version: `datasets==v1.1.3`
### Reproduction
```python
from datasets import load_dataset
data = load_dataset("amazon_polarity")
```
crashes with
```bash
FileNotFoundError: Couldn't find file at https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/amazon_polarity/amazon_polarity.py
```
and
```bash
FileNotFoundError: Couldn't find file at https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/amazon_polarity/amazon_polarity.py
```
and
```bash
FileNotFoundError: Couldn't find file locally at amazon_polarity/amazon_polarity.py, or remotely at https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/amazon_polarity/amazon_polarity.py or https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/amazon_polarity/amazon_polarity.py
``` | 45 | FileNotFoundError for `amazon_polarity`
Version: `datasets==v1.1.3`
### Reproduction
```python
from datasets import load_dataset
data = load_dataset("amazon_polarity")
```
crashes with
```bash
FileNotFoundError: Couldn't find file at https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/amazon_polarity/amazon_polarity.py
```
and
```bash
FileNotFoundError: Couldn't find file at https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/amazon_polarity/amazon_polarity.py
```
and
```bash
FileNotFoundError: Couldn't find file locally at amazon_polarity/amazon_polarity.py, or remotely at https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/amazon_polarity/amazon_polarity.py or https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/amazon_polarity/amazon_polarity.py
```
Hi @phtephanx , the `amazon_polarity` dataset has not been released yet. It will be available in the coming soon v2of `datasets` :)
You can still access it now if you want, but you will need to install datasets via the master branch:
`pip install git+https://github.com/huggingface/datasets.git@master` | [
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https://github.com/huggingface/datasets/issues/1581 | Installing datasets and transformers in a tensorflow docker image throws Permission Error on 'import transformers' | Thanks for reporting !
You can override the directory in which cache file are stored using for example
```
ENV HF_HOME="/root/cache/hf_cache_home"
```
This way both `transformers` and `datasets` will use this directory instead of the default `.cache` | I am using a docker container, based on latest tensorflow-gpu image, to run transformers and datasets (4.0.1 and 1.1.3 respectively - Dockerfile attached below). Importing transformers throws a Permission Error to access `/.cache`:
```
$ docker run --gpus=all --rm -it -u $(id -u):$(id -g) -v $(pwd)/data:/root/data -v $(pwd):/root -v $(pwd)/models/:/root/models -v $(pwd)/saved_models/:/root/saved_models -e "HOST_HOSTNAME=$(hostname)" hf-error:latest /bin/bash
________ _______________
___ __/__________________________________ ____/__ /________ __
__ / _ _ \_ __ \_ ___/ __ \_ ___/_ /_ __ /_ __ \_ | /| / /
_ / / __/ / / /(__ )/ /_/ / / _ __/ _ / / /_/ /_ |/ |/ /
/_/ \___//_/ /_//____/ \____//_/ /_/ /_/ \____/____/|__/
You are running this container as user with ID 1000 and group 1000,
which should map to the ID and group for your user on the Docker host. Great!
tf-docker /root > python
Python 3.6.9 (default, Oct 8 2020, 12:12:24)
[GCC 8.4.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import transformers
2020-12-15 23:53:21.165827: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/usr/local/lib/python3.6/dist-packages/transformers/__init__.py", line 22, in <module>
from .integrations import ( # isort:skip
File "/usr/local/lib/python3.6/dist-packages/transformers/integrations.py", line 5, in <module>
from .trainer_utils import EvaluationStrategy
File "/usr/local/lib/python3.6/dist-packages/transformers/trainer_utils.py", line 25, in <module>
from .file_utils import is_tf_available, is_torch_available, is_torch_tpu_available
File "/usr/local/lib/python3.6/dist-packages/transformers/file_utils.py", line 88, in <module>
import datasets # noqa: F401
File "/usr/local/lib/python3.6/dist-packages/datasets/__init__.py", line 26, in <module>
from .arrow_dataset import Dataset, concatenate_datasets
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_dataset.py", line 40, in <module>
from .arrow_reader import ArrowReader
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_reader.py", line 31, in <module>
from .utils import cached_path, logging
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/__init__.py", line 20, in <module>
from .download_manager import DownloadManager, GenerateMode
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/download_manager.py", line 25, in <module>
from .file_utils import HF_DATASETS_CACHE, cached_path, get_from_cache, hash_url_to_filename
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 118, in <module>
os.makedirs(HF_MODULES_CACHE, exist_ok=True)
File "/usr/lib/python3.6/os.py", line 210, in makedirs
makedirs(head, mode, exist_ok)
File "/usr/lib/python3.6/os.py", line 210, in makedirs
makedirs(head, mode, exist_ok)
File "/usr/lib/python3.6/os.py", line 220, in makedirs
mkdir(name, mode)
PermissionError: [Errno 13] Permission denied: '/.cache'
```
I've pinned the problem to `RUN pip install datasets`, and by commenting it you can actually import transformers correctly. Another workaround I've found is creating the directory and giving permissions to it directly on the Dockerfile.
```
FROM tensorflow/tensorflow:latest-gpu-jupyter
WORKDIR /root
EXPOSE 80
EXPOSE 8888
EXPOSE 6006
ENV SHELL /bin/bash
ENV PATH="/root/.local/bin:${PATH}"
ENV CUDA_CACHE_PATH="/root/cache/cuda"
ENV CUDA_CACHE_MAXSIZE="4294967296"
ENV TFHUB_CACHE_DIR="/root/cache/tfhub"
RUN pip install --upgrade pip
RUN apt update -y && apt upgrade -y
RUN pip install transformers
#Installing datasets will throw the error, try commenting and rebuilding
RUN pip install datasets
#Another workaround is creating the directory and give permissions explicitly
#RUN mkdir /.cache
#RUN chmod 777 /.cache
```
| 37 | Installing datasets and transformers in a tensorflow docker image throws Permission Error on 'import transformers'
I am using a docker container, based on latest tensorflow-gpu image, to run transformers and datasets (4.0.1 and 1.1.3 respectively - Dockerfile attached below). Importing transformers throws a Permission Error to access `/.cache`:
```
$ docker run --gpus=all --rm -it -u $(id -u):$(id -g) -v $(pwd)/data:/root/data -v $(pwd):/root -v $(pwd)/models/:/root/models -v $(pwd)/saved_models/:/root/saved_models -e "HOST_HOSTNAME=$(hostname)" hf-error:latest /bin/bash
________ _______________
___ __/__________________________________ ____/__ /________ __
__ / _ _ \_ __ \_ ___/ __ \_ ___/_ /_ __ /_ __ \_ | /| / /
_ / / __/ / / /(__ )/ /_/ / / _ __/ _ / / /_/ /_ |/ |/ /
/_/ \___//_/ /_//____/ \____//_/ /_/ /_/ \____/____/|__/
You are running this container as user with ID 1000 and group 1000,
which should map to the ID and group for your user on the Docker host. Great!
tf-docker /root > python
Python 3.6.9 (default, Oct 8 2020, 12:12:24)
[GCC 8.4.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import transformers
2020-12-15 23:53:21.165827: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/usr/local/lib/python3.6/dist-packages/transformers/__init__.py", line 22, in <module>
from .integrations import ( # isort:skip
File "/usr/local/lib/python3.6/dist-packages/transformers/integrations.py", line 5, in <module>
from .trainer_utils import EvaluationStrategy
File "/usr/local/lib/python3.6/dist-packages/transformers/trainer_utils.py", line 25, in <module>
from .file_utils import is_tf_available, is_torch_available, is_torch_tpu_available
File "/usr/local/lib/python3.6/dist-packages/transformers/file_utils.py", line 88, in <module>
import datasets # noqa: F401
File "/usr/local/lib/python3.6/dist-packages/datasets/__init__.py", line 26, in <module>
from .arrow_dataset import Dataset, concatenate_datasets
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_dataset.py", line 40, in <module>
from .arrow_reader import ArrowReader
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_reader.py", line 31, in <module>
from .utils import cached_path, logging
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/__init__.py", line 20, in <module>
from .download_manager import DownloadManager, GenerateMode
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/download_manager.py", line 25, in <module>
from .file_utils import HF_DATASETS_CACHE, cached_path, get_from_cache, hash_url_to_filename
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 118, in <module>
os.makedirs(HF_MODULES_CACHE, exist_ok=True)
File "/usr/lib/python3.6/os.py", line 210, in makedirs
makedirs(head, mode, exist_ok)
File "/usr/lib/python3.6/os.py", line 210, in makedirs
makedirs(head, mode, exist_ok)
File "/usr/lib/python3.6/os.py", line 220, in makedirs
mkdir(name, mode)
PermissionError: [Errno 13] Permission denied: '/.cache'
```
I've pinned the problem to `RUN pip install datasets`, and by commenting it you can actually import transformers correctly. Another workaround I've found is creating the directory and giving permissions to it directly on the Dockerfile.
```
FROM tensorflow/tensorflow:latest-gpu-jupyter
WORKDIR /root
EXPOSE 80
EXPOSE 8888
EXPOSE 6006
ENV SHELL /bin/bash
ENV PATH="/root/.local/bin:${PATH}"
ENV CUDA_CACHE_PATH="/root/cache/cuda"
ENV CUDA_CACHE_MAXSIZE="4294967296"
ENV TFHUB_CACHE_DIR="/root/cache/tfhub"
RUN pip install --upgrade pip
RUN apt update -y && apt upgrade -y
RUN pip install transformers
#Installing datasets will throw the error, try commenting and rebuilding
RUN pip install datasets
#Another workaround is creating the directory and give permissions explicitly
#RUN mkdir /.cache
#RUN chmod 777 /.cache
```
Thanks for reporting !
You can override the directory in which cache file are stored using for example
```
ENV HF_HOME="/root/cache/hf_cache_home"
```
This way both `transformers` and `datasets` will use this directory instead of the default `.cache` | [
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https://github.com/huggingface/datasets/issues/1581 | Installing datasets and transformers in a tensorflow docker image throws Permission Error on 'import transformers' | > Thanks for reporting !
> You can override the directory in which cache file are stored using for example
>
> ```
> ENV HF_HOME="/root/cache/hf_cache_home"
> ```
>
> This way both `transformers` and `datasets` will use this directory instead of the default `.cache`
can we disable caching directly? | I am using a docker container, based on latest tensorflow-gpu image, to run transformers and datasets (4.0.1 and 1.1.3 respectively - Dockerfile attached below). Importing transformers throws a Permission Error to access `/.cache`:
```
$ docker run --gpus=all --rm -it -u $(id -u):$(id -g) -v $(pwd)/data:/root/data -v $(pwd):/root -v $(pwd)/models/:/root/models -v $(pwd)/saved_models/:/root/saved_models -e "HOST_HOSTNAME=$(hostname)" hf-error:latest /bin/bash
________ _______________
___ __/__________________________________ ____/__ /________ __
__ / _ _ \_ __ \_ ___/ __ \_ ___/_ /_ __ /_ __ \_ | /| / /
_ / / __/ / / /(__ )/ /_/ / / _ __/ _ / / /_/ /_ |/ |/ /
/_/ \___//_/ /_//____/ \____//_/ /_/ /_/ \____/____/|__/
You are running this container as user with ID 1000 and group 1000,
which should map to the ID and group for your user on the Docker host. Great!
tf-docker /root > python
Python 3.6.9 (default, Oct 8 2020, 12:12:24)
[GCC 8.4.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import transformers
2020-12-15 23:53:21.165827: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/usr/local/lib/python3.6/dist-packages/transformers/__init__.py", line 22, in <module>
from .integrations import ( # isort:skip
File "/usr/local/lib/python3.6/dist-packages/transformers/integrations.py", line 5, in <module>
from .trainer_utils import EvaluationStrategy
File "/usr/local/lib/python3.6/dist-packages/transformers/trainer_utils.py", line 25, in <module>
from .file_utils import is_tf_available, is_torch_available, is_torch_tpu_available
File "/usr/local/lib/python3.6/dist-packages/transformers/file_utils.py", line 88, in <module>
import datasets # noqa: F401
File "/usr/local/lib/python3.6/dist-packages/datasets/__init__.py", line 26, in <module>
from .arrow_dataset import Dataset, concatenate_datasets
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_dataset.py", line 40, in <module>
from .arrow_reader import ArrowReader
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_reader.py", line 31, in <module>
from .utils import cached_path, logging
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/__init__.py", line 20, in <module>
from .download_manager import DownloadManager, GenerateMode
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/download_manager.py", line 25, in <module>
from .file_utils import HF_DATASETS_CACHE, cached_path, get_from_cache, hash_url_to_filename
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 118, in <module>
os.makedirs(HF_MODULES_CACHE, exist_ok=True)
File "/usr/lib/python3.6/os.py", line 210, in makedirs
makedirs(head, mode, exist_ok)
File "/usr/lib/python3.6/os.py", line 210, in makedirs
makedirs(head, mode, exist_ok)
File "/usr/lib/python3.6/os.py", line 220, in makedirs
mkdir(name, mode)
PermissionError: [Errno 13] Permission denied: '/.cache'
```
I've pinned the problem to `RUN pip install datasets`, and by commenting it you can actually import transformers correctly. Another workaround I've found is creating the directory and giving permissions to it directly on the Dockerfile.
```
FROM tensorflow/tensorflow:latest-gpu-jupyter
WORKDIR /root
EXPOSE 80
EXPOSE 8888
EXPOSE 6006
ENV SHELL /bin/bash
ENV PATH="/root/.local/bin:${PATH}"
ENV CUDA_CACHE_PATH="/root/cache/cuda"
ENV CUDA_CACHE_MAXSIZE="4294967296"
ENV TFHUB_CACHE_DIR="/root/cache/tfhub"
RUN pip install --upgrade pip
RUN apt update -y && apt upgrade -y
RUN pip install transformers
#Installing datasets will throw the error, try commenting and rebuilding
RUN pip install datasets
#Another workaround is creating the directory and give permissions explicitly
#RUN mkdir /.cache
#RUN chmod 777 /.cache
```
| 50 | Installing datasets and transformers in a tensorflow docker image throws Permission Error on 'import transformers'
I am using a docker container, based on latest tensorflow-gpu image, to run transformers and datasets (4.0.1 and 1.1.3 respectively - Dockerfile attached below). Importing transformers throws a Permission Error to access `/.cache`:
```
$ docker run --gpus=all --rm -it -u $(id -u):$(id -g) -v $(pwd)/data:/root/data -v $(pwd):/root -v $(pwd)/models/:/root/models -v $(pwd)/saved_models/:/root/saved_models -e "HOST_HOSTNAME=$(hostname)" hf-error:latest /bin/bash
________ _______________
___ __/__________________________________ ____/__ /________ __
__ / _ _ \_ __ \_ ___/ __ \_ ___/_ /_ __ /_ __ \_ | /| / /
_ / / __/ / / /(__ )/ /_/ / / _ __/ _ / / /_/ /_ |/ |/ /
/_/ \___//_/ /_//____/ \____//_/ /_/ /_/ \____/____/|__/
You are running this container as user with ID 1000 and group 1000,
which should map to the ID and group for your user on the Docker host. Great!
tf-docker /root > python
Python 3.6.9 (default, Oct 8 2020, 12:12:24)
[GCC 8.4.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import transformers
2020-12-15 23:53:21.165827: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/usr/local/lib/python3.6/dist-packages/transformers/__init__.py", line 22, in <module>
from .integrations import ( # isort:skip
File "/usr/local/lib/python3.6/dist-packages/transformers/integrations.py", line 5, in <module>
from .trainer_utils import EvaluationStrategy
File "/usr/local/lib/python3.6/dist-packages/transformers/trainer_utils.py", line 25, in <module>
from .file_utils import is_tf_available, is_torch_available, is_torch_tpu_available
File "/usr/local/lib/python3.6/dist-packages/transformers/file_utils.py", line 88, in <module>
import datasets # noqa: F401
File "/usr/local/lib/python3.6/dist-packages/datasets/__init__.py", line 26, in <module>
from .arrow_dataset import Dataset, concatenate_datasets
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_dataset.py", line 40, in <module>
from .arrow_reader import ArrowReader
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_reader.py", line 31, in <module>
from .utils import cached_path, logging
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/__init__.py", line 20, in <module>
from .download_manager import DownloadManager, GenerateMode
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/download_manager.py", line 25, in <module>
from .file_utils import HF_DATASETS_CACHE, cached_path, get_from_cache, hash_url_to_filename
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 118, in <module>
os.makedirs(HF_MODULES_CACHE, exist_ok=True)
File "/usr/lib/python3.6/os.py", line 210, in makedirs
makedirs(head, mode, exist_ok)
File "/usr/lib/python3.6/os.py", line 210, in makedirs
makedirs(head, mode, exist_ok)
File "/usr/lib/python3.6/os.py", line 220, in makedirs
mkdir(name, mode)
PermissionError: [Errno 13] Permission denied: '/.cache'
```
I've pinned the problem to `RUN pip install datasets`, and by commenting it you can actually import transformers correctly. Another workaround I've found is creating the directory and giving permissions to it directly on the Dockerfile.
```
FROM tensorflow/tensorflow:latest-gpu-jupyter
WORKDIR /root
EXPOSE 80
EXPOSE 8888
EXPOSE 6006
ENV SHELL /bin/bash
ENV PATH="/root/.local/bin:${PATH}"
ENV CUDA_CACHE_PATH="/root/cache/cuda"
ENV CUDA_CACHE_MAXSIZE="4294967296"
ENV TFHUB_CACHE_DIR="/root/cache/tfhub"
RUN pip install --upgrade pip
RUN apt update -y && apt upgrade -y
RUN pip install transformers
#Installing datasets will throw the error, try commenting and rebuilding
RUN pip install datasets
#Another workaround is creating the directory and give permissions explicitly
#RUN mkdir /.cache
#RUN chmod 777 /.cache
```
> Thanks for reporting !
> You can override the directory in which cache file are stored using for example
>
> ```
> ENV HF_HOME="/root/cache/hf_cache_home"
> ```
>
> This way both `transformers` and `datasets` will use this directory instead of the default `.cache`
can we disable caching directly? | [
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https://github.com/huggingface/datasets/issues/1581 | Installing datasets and transformers in a tensorflow docker image throws Permission Error on 'import transformers' | Hi ! Unfortunately no since we need this directory to load datasets.
When you load a dataset, it downloads the raw data files in the cache directory inside <cache_dir>/downloads. Then it builds the dataset and saves it as arrow data inside <cache_dir>/<dataset_name>.
However you can specify the directory of your choice, and it can be a temporary directory if you want to clean everything up at one point. | I am using a docker container, based on latest tensorflow-gpu image, to run transformers and datasets (4.0.1 and 1.1.3 respectively - Dockerfile attached below). Importing transformers throws a Permission Error to access `/.cache`:
```
$ docker run --gpus=all --rm -it -u $(id -u):$(id -g) -v $(pwd)/data:/root/data -v $(pwd):/root -v $(pwd)/models/:/root/models -v $(pwd)/saved_models/:/root/saved_models -e "HOST_HOSTNAME=$(hostname)" hf-error:latest /bin/bash
________ _______________
___ __/__________________________________ ____/__ /________ __
__ / _ _ \_ __ \_ ___/ __ \_ ___/_ /_ __ /_ __ \_ | /| / /
_ / / __/ / / /(__ )/ /_/ / / _ __/ _ / / /_/ /_ |/ |/ /
/_/ \___//_/ /_//____/ \____//_/ /_/ /_/ \____/____/|__/
You are running this container as user with ID 1000 and group 1000,
which should map to the ID and group for your user on the Docker host. Great!
tf-docker /root > python
Python 3.6.9 (default, Oct 8 2020, 12:12:24)
[GCC 8.4.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import transformers
2020-12-15 23:53:21.165827: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/usr/local/lib/python3.6/dist-packages/transformers/__init__.py", line 22, in <module>
from .integrations import ( # isort:skip
File "/usr/local/lib/python3.6/dist-packages/transformers/integrations.py", line 5, in <module>
from .trainer_utils import EvaluationStrategy
File "/usr/local/lib/python3.6/dist-packages/transformers/trainer_utils.py", line 25, in <module>
from .file_utils import is_tf_available, is_torch_available, is_torch_tpu_available
File "/usr/local/lib/python3.6/dist-packages/transformers/file_utils.py", line 88, in <module>
import datasets # noqa: F401
File "/usr/local/lib/python3.6/dist-packages/datasets/__init__.py", line 26, in <module>
from .arrow_dataset import Dataset, concatenate_datasets
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_dataset.py", line 40, in <module>
from .arrow_reader import ArrowReader
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_reader.py", line 31, in <module>
from .utils import cached_path, logging
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/__init__.py", line 20, in <module>
from .download_manager import DownloadManager, GenerateMode
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/download_manager.py", line 25, in <module>
from .file_utils import HF_DATASETS_CACHE, cached_path, get_from_cache, hash_url_to_filename
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 118, in <module>
os.makedirs(HF_MODULES_CACHE, exist_ok=True)
File "/usr/lib/python3.6/os.py", line 210, in makedirs
makedirs(head, mode, exist_ok)
File "/usr/lib/python3.6/os.py", line 210, in makedirs
makedirs(head, mode, exist_ok)
File "/usr/lib/python3.6/os.py", line 220, in makedirs
mkdir(name, mode)
PermissionError: [Errno 13] Permission denied: '/.cache'
```
I've pinned the problem to `RUN pip install datasets`, and by commenting it you can actually import transformers correctly. Another workaround I've found is creating the directory and giving permissions to it directly on the Dockerfile.
```
FROM tensorflow/tensorflow:latest-gpu-jupyter
WORKDIR /root
EXPOSE 80
EXPOSE 8888
EXPOSE 6006
ENV SHELL /bin/bash
ENV PATH="/root/.local/bin:${PATH}"
ENV CUDA_CACHE_PATH="/root/cache/cuda"
ENV CUDA_CACHE_MAXSIZE="4294967296"
ENV TFHUB_CACHE_DIR="/root/cache/tfhub"
RUN pip install --upgrade pip
RUN apt update -y && apt upgrade -y
RUN pip install transformers
#Installing datasets will throw the error, try commenting and rebuilding
RUN pip install datasets
#Another workaround is creating the directory and give permissions explicitly
#RUN mkdir /.cache
#RUN chmod 777 /.cache
```
| 68 | Installing datasets and transformers in a tensorflow docker image throws Permission Error on 'import transformers'
I am using a docker container, based on latest tensorflow-gpu image, to run transformers and datasets (4.0.1 and 1.1.3 respectively - Dockerfile attached below). Importing transformers throws a Permission Error to access `/.cache`:
```
$ docker run --gpus=all --rm -it -u $(id -u):$(id -g) -v $(pwd)/data:/root/data -v $(pwd):/root -v $(pwd)/models/:/root/models -v $(pwd)/saved_models/:/root/saved_models -e "HOST_HOSTNAME=$(hostname)" hf-error:latest /bin/bash
________ _______________
___ __/__________________________________ ____/__ /________ __
__ / _ _ \_ __ \_ ___/ __ \_ ___/_ /_ __ /_ __ \_ | /| / /
_ / / __/ / / /(__ )/ /_/ / / _ __/ _ / / /_/ /_ |/ |/ /
/_/ \___//_/ /_//____/ \____//_/ /_/ /_/ \____/____/|__/
You are running this container as user with ID 1000 and group 1000,
which should map to the ID and group for your user on the Docker host. Great!
tf-docker /root > python
Python 3.6.9 (default, Oct 8 2020, 12:12:24)
[GCC 8.4.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import transformers
2020-12-15 23:53:21.165827: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/usr/local/lib/python3.6/dist-packages/transformers/__init__.py", line 22, in <module>
from .integrations import ( # isort:skip
File "/usr/local/lib/python3.6/dist-packages/transformers/integrations.py", line 5, in <module>
from .trainer_utils import EvaluationStrategy
File "/usr/local/lib/python3.6/dist-packages/transformers/trainer_utils.py", line 25, in <module>
from .file_utils import is_tf_available, is_torch_available, is_torch_tpu_available
File "/usr/local/lib/python3.6/dist-packages/transformers/file_utils.py", line 88, in <module>
import datasets # noqa: F401
File "/usr/local/lib/python3.6/dist-packages/datasets/__init__.py", line 26, in <module>
from .arrow_dataset import Dataset, concatenate_datasets
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_dataset.py", line 40, in <module>
from .arrow_reader import ArrowReader
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_reader.py", line 31, in <module>
from .utils import cached_path, logging
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/__init__.py", line 20, in <module>
from .download_manager import DownloadManager, GenerateMode
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/download_manager.py", line 25, in <module>
from .file_utils import HF_DATASETS_CACHE, cached_path, get_from_cache, hash_url_to_filename
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 118, in <module>
os.makedirs(HF_MODULES_CACHE, exist_ok=True)
File "/usr/lib/python3.6/os.py", line 210, in makedirs
makedirs(head, mode, exist_ok)
File "/usr/lib/python3.6/os.py", line 210, in makedirs
makedirs(head, mode, exist_ok)
File "/usr/lib/python3.6/os.py", line 220, in makedirs
mkdir(name, mode)
PermissionError: [Errno 13] Permission denied: '/.cache'
```
I've pinned the problem to `RUN pip install datasets`, and by commenting it you can actually import transformers correctly. Another workaround I've found is creating the directory and giving permissions to it directly on the Dockerfile.
```
FROM tensorflow/tensorflow:latest-gpu-jupyter
WORKDIR /root
EXPOSE 80
EXPOSE 8888
EXPOSE 6006
ENV SHELL /bin/bash
ENV PATH="/root/.local/bin:${PATH}"
ENV CUDA_CACHE_PATH="/root/cache/cuda"
ENV CUDA_CACHE_MAXSIZE="4294967296"
ENV TFHUB_CACHE_DIR="/root/cache/tfhub"
RUN pip install --upgrade pip
RUN apt update -y && apt upgrade -y
RUN pip install transformers
#Installing datasets will throw the error, try commenting and rebuilding
RUN pip install datasets
#Another workaround is creating the directory and give permissions explicitly
#RUN mkdir /.cache
#RUN chmod 777 /.cache
```
Hi ! Unfortunately no since we need this directory to load datasets.
When you load a dataset, it downloads the raw data files in the cache directory inside <cache_dir>/downloads. Then it builds the dataset and saves it as arrow data inside <cache_dir>/<dataset_name>.
However you can specify the directory of your choice, and it can be a temporary directory if you want to clean everything up at one point. | [
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https://github.com/huggingface/datasets/issues/1541 | connection issue while downloading data | could you tell me how I can avoid download, by pre-downloading the data first, put them in a folder so the code does not try to redownload? could you tell me the path to put the downloaded data, and how to do it? thanks
@lhoestq | Hi
I am running my codes on google cloud, and I am getting this error resulting in the failure of the codes when trying to download the data, could you assist me to solve this? also as a temporary solution, could you tell me how I can increase the number of retries and timeout to at least let the models run for now. thanks
```
Traceback (most recent call last):
File "finetune_t5_trainer.py", line 361, in <module>
main()
File "finetune_t5_trainer.py", line 269, in main
add_prefix=False if training_args.train_adapters else True)
File "/workdir/seq2seq/data/tasks.py", line 70, in get_dataset
dataset = self.load_dataset(split=split)
File "/workdir/seq2seq/data/tasks.py", line 306, in load_dataset
return datasets.load_dataset('glue', 'cola', split=split)
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 589, in load_dataset
path, script_version=script_version, download_config=download_config, download_mode=download_mode, dataset=True
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 263, in prepare_module
head_hf_s3(path, filename=name, dataset=dataset)
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 200, in head_hf_s3
return http_head(hf_bucket_url(identifier=identifier, filename=filename, use_cdn=use_cdn, dataset=dataset))
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 403, in http_head
url, proxies=proxies, headers=headers, cookies=cookies, allow_redirects=allow_redirects, timeout=timeout
File "/usr/local/lib/python3.6/dist-packages/requests/api.py", line 104, in head
return request('head', url, **kwargs)
File "/usr/local/lib/python3.6/dist-packages/requests/api.py", line 61, in request
return session.request(method=method, url=url, **kwargs)
File "/usr/local/lib/python3.6/dist-packages/requests/sessions.py", line 542, in request
resp = self.send(prep, **send_kwargs)
File "/usr/local/lib/python3.6/dist-packages/requests/sessions.py", line 655, in send
r = adapter.send(request, **kwargs)
File "/usr/local/lib/python3.6/dist-packages/requests/adapters.py", line 504, in send
raise ConnectTimeout(e, request=request)
requests.exceptions.ConnectTimeout: HTTPSConnectionPool(host='s3.amazonaws.com', port=443): Max retries exceeded with url: /datasets.huggingface.co/datasets/datasets/glue/glue.py (Caused by ConnectTimeoutError(<urllib3.connection.HTTPSConnection object at 0x7f47db511e80>, 'Connection to s3.amazonaws.com timed out. (connect timeout=10)'))
``` | 45 | connection issue while downloading data
Hi
I am running my codes on google cloud, and I am getting this error resulting in the failure of the codes when trying to download the data, could you assist me to solve this? also as a temporary solution, could you tell me how I can increase the number of retries and timeout to at least let the models run for now. thanks
```
Traceback (most recent call last):
File "finetune_t5_trainer.py", line 361, in <module>
main()
File "finetune_t5_trainer.py", line 269, in main
add_prefix=False if training_args.train_adapters else True)
File "/workdir/seq2seq/data/tasks.py", line 70, in get_dataset
dataset = self.load_dataset(split=split)
File "/workdir/seq2seq/data/tasks.py", line 306, in load_dataset
return datasets.load_dataset('glue', 'cola', split=split)
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 589, in load_dataset
path, script_version=script_version, download_config=download_config, download_mode=download_mode, dataset=True
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 263, in prepare_module
head_hf_s3(path, filename=name, dataset=dataset)
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 200, in head_hf_s3
return http_head(hf_bucket_url(identifier=identifier, filename=filename, use_cdn=use_cdn, dataset=dataset))
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 403, in http_head
url, proxies=proxies, headers=headers, cookies=cookies, allow_redirects=allow_redirects, timeout=timeout
File "/usr/local/lib/python3.6/dist-packages/requests/api.py", line 104, in head
return request('head', url, **kwargs)
File "/usr/local/lib/python3.6/dist-packages/requests/api.py", line 61, in request
return session.request(method=method, url=url, **kwargs)
File "/usr/local/lib/python3.6/dist-packages/requests/sessions.py", line 542, in request
resp = self.send(prep, **send_kwargs)
File "/usr/local/lib/python3.6/dist-packages/requests/sessions.py", line 655, in send
r = adapter.send(request, **kwargs)
File "/usr/local/lib/python3.6/dist-packages/requests/adapters.py", line 504, in send
raise ConnectTimeout(e, request=request)
requests.exceptions.ConnectTimeout: HTTPSConnectionPool(host='s3.amazonaws.com', port=443): Max retries exceeded with url: /datasets.huggingface.co/datasets/datasets/glue/glue.py (Caused by ConnectTimeoutError(<urllib3.connection.HTTPSConnection object at 0x7f47db511e80>, 'Connection to s3.amazonaws.com timed out. (connect timeout=10)'))
```
could you tell me how I can avoid download, by pre-downloading the data first, put them in a folder so the code does not try to redownload? could you tell me the path to put the downloaded data, and how to do it? thanks
@lhoestq | [
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https://github.com/huggingface/datasets/issues/1541 | connection issue while downloading data | Does your instance have an internet connection ?
If you don't have an internet connection you'll need to have the dataset on the instance disk.
To do so first download the dataset on another machine using `load_dataset` and then you can save it in a folder using `my_dataset.save_to_disk("path/to/folder")`. Once the folder is copied on your instance you can reload the dataset with `datasets.load_from_disk("path/to/folder")` | Hi
I am running my codes on google cloud, and I am getting this error resulting in the failure of the codes when trying to download the data, could you assist me to solve this? also as a temporary solution, could you tell me how I can increase the number of retries and timeout to at least let the models run for now. thanks
```
Traceback (most recent call last):
File "finetune_t5_trainer.py", line 361, in <module>
main()
File "finetune_t5_trainer.py", line 269, in main
add_prefix=False if training_args.train_adapters else True)
File "/workdir/seq2seq/data/tasks.py", line 70, in get_dataset
dataset = self.load_dataset(split=split)
File "/workdir/seq2seq/data/tasks.py", line 306, in load_dataset
return datasets.load_dataset('glue', 'cola', split=split)
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 589, in load_dataset
path, script_version=script_version, download_config=download_config, download_mode=download_mode, dataset=True
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 263, in prepare_module
head_hf_s3(path, filename=name, dataset=dataset)
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 200, in head_hf_s3
return http_head(hf_bucket_url(identifier=identifier, filename=filename, use_cdn=use_cdn, dataset=dataset))
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 403, in http_head
url, proxies=proxies, headers=headers, cookies=cookies, allow_redirects=allow_redirects, timeout=timeout
File "/usr/local/lib/python3.6/dist-packages/requests/api.py", line 104, in head
return request('head', url, **kwargs)
File "/usr/local/lib/python3.6/dist-packages/requests/api.py", line 61, in request
return session.request(method=method, url=url, **kwargs)
File "/usr/local/lib/python3.6/dist-packages/requests/sessions.py", line 542, in request
resp = self.send(prep, **send_kwargs)
File "/usr/local/lib/python3.6/dist-packages/requests/sessions.py", line 655, in send
r = adapter.send(request, **kwargs)
File "/usr/local/lib/python3.6/dist-packages/requests/adapters.py", line 504, in send
raise ConnectTimeout(e, request=request)
requests.exceptions.ConnectTimeout: HTTPSConnectionPool(host='s3.amazonaws.com', port=443): Max retries exceeded with url: /datasets.huggingface.co/datasets/datasets/glue/glue.py (Caused by ConnectTimeoutError(<urllib3.connection.HTTPSConnection object at 0x7f47db511e80>, 'Connection to s3.amazonaws.com timed out. (connect timeout=10)'))
``` | 63 | connection issue while downloading data
Hi
I am running my codes on google cloud, and I am getting this error resulting in the failure of the codes when trying to download the data, could you assist me to solve this? also as a temporary solution, could you tell me how I can increase the number of retries and timeout to at least let the models run for now. thanks
```
Traceback (most recent call last):
File "finetune_t5_trainer.py", line 361, in <module>
main()
File "finetune_t5_trainer.py", line 269, in main
add_prefix=False if training_args.train_adapters else True)
File "/workdir/seq2seq/data/tasks.py", line 70, in get_dataset
dataset = self.load_dataset(split=split)
File "/workdir/seq2seq/data/tasks.py", line 306, in load_dataset
return datasets.load_dataset('glue', 'cola', split=split)
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 589, in load_dataset
path, script_version=script_version, download_config=download_config, download_mode=download_mode, dataset=True
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 263, in prepare_module
head_hf_s3(path, filename=name, dataset=dataset)
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 200, in head_hf_s3
return http_head(hf_bucket_url(identifier=identifier, filename=filename, use_cdn=use_cdn, dataset=dataset))
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/file_utils.py", line 403, in http_head
url, proxies=proxies, headers=headers, cookies=cookies, allow_redirects=allow_redirects, timeout=timeout
File "/usr/local/lib/python3.6/dist-packages/requests/api.py", line 104, in head
return request('head', url, **kwargs)
File "/usr/local/lib/python3.6/dist-packages/requests/api.py", line 61, in request
return session.request(method=method, url=url, **kwargs)
File "/usr/local/lib/python3.6/dist-packages/requests/sessions.py", line 542, in request
resp = self.send(prep, **send_kwargs)
File "/usr/local/lib/python3.6/dist-packages/requests/sessions.py", line 655, in send
r = adapter.send(request, **kwargs)
File "/usr/local/lib/python3.6/dist-packages/requests/adapters.py", line 504, in send
raise ConnectTimeout(e, request=request)
requests.exceptions.ConnectTimeout: HTTPSConnectionPool(host='s3.amazonaws.com', port=443): Max retries exceeded with url: /datasets.huggingface.co/datasets/datasets/glue/glue.py (Caused by ConnectTimeoutError(<urllib3.connection.HTTPSConnection object at 0x7f47db511e80>, 'Connection to s3.amazonaws.com timed out. (connect timeout=10)'))
```
Does your instance have an internet connection ?
If you don't have an internet connection you'll need to have the dataset on the instance disk.
To do so first download the dataset on another machine using `load_dataset` and then you can save it in a folder using `my_dataset.save_to_disk("path/to/folder")`. Once the folder is copied on your instance you can reload the dataset with `datasets.load_from_disk("path/to/folder")` | [
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https://github.com/huggingface/datasets/issues/1514 | how to get all the options of a property in datasets | In a dataset, labels correspond to the `ClassLabel` feature that has the `names` property that returns string represenation of the integer classes (or `num_classes` to get the number of different classes). | Hi
could you tell me how I can get all unique options of a property of dataset?
for instance in case of boolq, if the user wants to know which unique labels it has, is there a way to access unique labels without getting all training data lables and then forming a set i mean? thanks | 31 | how to get all the options of a property in datasets
Hi
could you tell me how I can get all unique options of a property of dataset?
for instance in case of boolq, if the user wants to know which unique labels it has, is there a way to access unique labels without getting all training data lables and then forming a set i mean? thanks
In a dataset, labels correspond to the `ClassLabel` feature that has the `names` property that returns string represenation of the integer classes (or `num_classes` to get the number of different classes). | [
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https://github.com/huggingface/datasets/issues/1514 | how to get all the options of a property in datasets | I think the `features` attribute of the dataset object is what you are looking for:
```
>>> dataset.features
{'sentence1': Value(dtype='string', id=None),
'sentence2': Value(dtype='string', id=None),
'label': ClassLabel(num_classes=2, names=['not_equivalent', 'equivalent'], names_file=None, id=None),
'idx': Value(dtype='int32', id=None)
}
>>> dataset.features["label"].names
['not_equivalent', 'equivalent']
```
For reference: https://huggingface.co/docs/datasets/exploring.html | Hi
could you tell me how I can get all unique options of a property of dataset?
for instance in case of boolq, if the user wants to know which unique labels it has, is there a way to access unique labels without getting all training data lables and then forming a set i mean? thanks | 42 | how to get all the options of a property in datasets
Hi
could you tell me how I can get all unique options of a property of dataset?
for instance in case of boolq, if the user wants to know which unique labels it has, is there a way to access unique labels without getting all training data lables and then forming a set i mean? thanks
I think the `features` attribute of the dataset object is what you are looking for:
```
>>> dataset.features
{'sentence1': Value(dtype='string', id=None),
'sentence2': Value(dtype='string', id=None),
'label': ClassLabel(num_classes=2, names=['not_equivalent', 'equivalent'], names_file=None, id=None),
'idx': Value(dtype='int32', id=None)
}
>>> dataset.features["label"].names
['not_equivalent', 'equivalent']
```
For reference: https://huggingface.co/docs/datasets/exploring.html | [
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https://github.com/huggingface/datasets/issues/1478 | Inconsistent argument names. | Also for the `Accuracy` metric the `accuracy_score` method should have its args in the opposite order so `accuracy_score(predictions, references,,,)`. | Just find it a wee bit odd that in the transformers library `predictions` are those made by the model:
https://github.com/huggingface/transformers/blob/master/src/transformers/trainer_utils.py#L51-L61
While in many datasets metrics they are the ground truth labels:
https://github.com/huggingface/datasets/blob/c3f53792a744ede18d748a1133b6597fdd2d8d18/metrics/accuracy/accuracy.py#L31-L40
Do you think predictions & references should be swapped? I'd be willing to do some refactoring here if you agree. | 19 | Inconsistent argument names.
Just find it a wee bit odd that in the transformers library `predictions` are those made by the model:
https://github.com/huggingface/transformers/blob/master/src/transformers/trainer_utils.py#L51-L61
While in many datasets metrics they are the ground truth labels:
https://github.com/huggingface/datasets/blob/c3f53792a744ede18d748a1133b6597fdd2d8d18/metrics/accuracy/accuracy.py#L31-L40
Do you think predictions & references should be swapped? I'd be willing to do some refactoring here if you agree.
Also for the `Accuracy` metric the `accuracy_score` method should have its args in the opposite order so `accuracy_score(predictions, references,,,)`. | [
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] |
https://github.com/huggingface/datasets/issues/1478 | Inconsistent argument names. | Thanks for pointing this out ! 🕵🏻
Predictions and references should indeed be swapped in the docstring.
However, the call to `accuracy_score` should not be changed, it [signature](https://scikit-learn.org/stable/modules/generated/sklearn.metrics.accuracy_score.html#sklearn.metrics.accuracy_score) being:
```
sklearn.metrics.accuracy_score(y_true, y_pred, *, normalize=True, sample_weight=None)
```
Feel free to open a PR if you want to fix this :) | Just find it a wee bit odd that in the transformers library `predictions` are those made by the model:
https://github.com/huggingface/transformers/blob/master/src/transformers/trainer_utils.py#L51-L61
While in many datasets metrics they are the ground truth labels:
https://github.com/huggingface/datasets/blob/c3f53792a744ede18d748a1133b6597fdd2d8d18/metrics/accuracy/accuracy.py#L31-L40
Do you think predictions & references should be swapped? I'd be willing to do some refactoring here if you agree. | 49 | Inconsistent argument names.
Just find it a wee bit odd that in the transformers library `predictions` are those made by the model:
https://github.com/huggingface/transformers/blob/master/src/transformers/trainer_utils.py#L51-L61
While in many datasets metrics they are the ground truth labels:
https://github.com/huggingface/datasets/blob/c3f53792a744ede18d748a1133b6597fdd2d8d18/metrics/accuracy/accuracy.py#L31-L40
Do you think predictions & references should be swapped? I'd be willing to do some refactoring here if you agree.
Thanks for pointing this out ! 🕵🏻
Predictions and references should indeed be swapped in the docstring.
However, the call to `accuracy_score` should not be changed, it [signature](https://scikit-learn.org/stable/modules/generated/sklearn.metrics.accuracy_score.html#sklearn.metrics.accuracy_score) being:
```
sklearn.metrics.accuracy_score(y_true, y_pred, *, normalize=True, sample_weight=None)
```
Feel free to open a PR if you want to fix this :) | [
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] |
https://github.com/huggingface/datasets/issues/1452 | SNLI dataset contains labels with value -1 | I believe the `-1` label is used for missing/NULL data as per HuggingFace Dataset conventions. If I recall correctly SNLI has some entries with no (gold) labels in the dataset. | ```
import datasets
nli_data = datasets.load_dataset("snli")
train_data = nli_data['train']
train_labels = train_data['label']
label_set = set(train_labels)
print(label_set)
```
**Output:**
`{0, 1, 2, -1}` | 30 | SNLI dataset contains labels with value -1
```
import datasets
nli_data = datasets.load_dataset("snli")
train_data = nli_data['train']
train_labels = train_data['label']
label_set = set(train_labels)
print(label_set)
```
**Output:**
`{0, 1, 2, -1}`
I believe the `-1` label is used for missing/NULL data as per HuggingFace Dataset conventions. If I recall correctly SNLI has some entries with no (gold) labels in the dataset. | [
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https://github.com/huggingface/datasets/issues/1444 | FileNotFound remotly, can't load a dataset | This dataset will be available in version-2 of the library. If you want to use this dataset now, install datasets from `master` branch rather.
Command to install datasets from `master` branch:
`!pip install git+https://github.com/huggingface/datasets.git@master` | ```py
!pip install datasets
import datasets as ds
corpus = ds.load_dataset('large_spanish_corpus')
```
gives the error
> FileNotFoundError: Couldn't find file locally at large_spanish_corpus/large_spanish_corpus.py, or remotely at https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/large_spanish_corpus/large_spanish_corpus.py or https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/large_spanish_corpus/large_spanish_corpus.py
not just `large_spanish_corpus`, `zest` too, but `squad` is available.
this was using colab and localy | 34 | FileNotFound remotly, can't load a dataset
```py
!pip install datasets
import datasets as ds
corpus = ds.load_dataset('large_spanish_corpus')
```
gives the error
> FileNotFoundError: Couldn't find file locally at large_spanish_corpus/large_spanish_corpus.py, or remotely at https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/large_spanish_corpus/large_spanish_corpus.py or https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/large_spanish_corpus/large_spanish_corpus.py
not just `large_spanish_corpus`, `zest` too, but `squad` is available.
this was using colab and localy
This dataset will be available in version-2 of the library. If you want to use this dataset now, install datasets from `master` branch rather.
Command to install datasets from `master` branch:
`!pip install git+https://github.com/huggingface/datasets.git@master` | [
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https://github.com/huggingface/datasets/issues/1422 | Can't map dataset (loaded from csv) | Please could you post the whole script? I can't reproduce your issue. After updating the feature names/labels to match with the data, everything works fine for me. Try to update datasets/transformers to the newest version. | Hello! I am trying to load single csv file with two columns: ('label': str, 'text' str), where is label is str of two possible classes.
Below steps are similar with [this notebook](https://colab.research.google.com/drive/1-JIJlao4dI-Ilww_NnTc0rxtp-ymgDgM?usp=sharing), where bert model and tokenizer are used to classify lmdb loaded dataset. Only one difference it is the dataset loaded from .csv file.
Here is how I load it:
```python
data_path = 'data.csv'
data = pd.read_csv(data_path)
# process class name to indices
classes = ['neg', 'pos']
class_to_idx = { cl: i for i, cl in enumerate(classes) }
# now data is like {'label': int, 'text' str}
data['label'] = data['label'].apply(lambda x: class_to_idx[x])
# load dataset and map it with defined `tokenize` function
features = Features({
target: ClassLabel(num_classes=2, names=['neg', 'pos'], names_file=None, id=None),
feature: Value(dtype='string', id=None),
})
dataset = Dataset.from_pandas(data, features=features)
dataset.map(tokenize, batched=True, batch_size=len(dataset))
```
It ruins on the last line with following error:
```
---------------------------------------------------------------------------
AssertionError Traceback (most recent call last)
<ipython-input-112-32b6275ce418> in <module>()
9 })
10 dataset = Dataset.from_pandas(data, features=features)
---> 11 dataset.map(tokenizer, batched=True, batch_size=len(dataset))
2 frames
/usr/local/lib/python3.6/dist-packages/datasets/arrow_dataset.py in map(self, function, with_indices, input_columns, batched, batch_size, drop_last_batch, remove_columns, keep_in_memory, load_from_cache_file, cache_file_name, writer_batch_size, features, disable_nullable, fn_kwargs, num_proc, suffix_template, new_fingerprint)
1237 test_inputs = self[:2] if batched else self[0]
1238 test_indices = [0, 1] if batched else 0
-> 1239 update_data = does_function_return_dict(test_inputs, test_indices)
1240 logger.info("Testing finished, running the mapping function on the dataset")
1241
/usr/local/lib/python3.6/dist-packages/datasets/arrow_dataset.py in does_function_return_dict(inputs, indices)
1208 fn_args = [inputs] if input_columns is None else [inputs[col] for col in input_columns]
1209 processed_inputs = (
-> 1210 function(*fn_args, indices, **fn_kwargs) if with_indices else function(*fn_args, **fn_kwargs)
1211 )
1212 does_return_dict = isinstance(processed_inputs, Mapping)
/usr/local/lib/python3.6/dist-packages/transformers/tokenization_utils_base.py in __call__(self, text, text_pair, add_special_tokens, padding, truncation, max_length, stride, is_split_into_words, pad_to_multiple_of, return_tensors, return_token_type_ids, return_attention_mask, return_overflowing_tokens, return_special_tokens_mask, return_offsets_mapping, return_length, verbose, **kwargs)
2281 )
2282 ), (
-> 2283 "text input must of type `str` (single example), `List[str]` (batch or single pretokenized example) "
2284 "or `List[List[str]]` (batch of pretokenized examples)."
2285 )
AssertionError: text input must of type `str` (single example), `List[str]` (batch or single pretokenized example) or `List[List[str]]` (batch of pretokenized examples).
```
which I think is not expected. I also tried the same steps using `Dataset.from_csv` which resulted in the same error.
For reproducing this, I used [this dataset from kaggle](https://www.kaggle.com/team-ai/spam-text-message-classification) | 35 | Can't map dataset (loaded from csv)
Hello! I am trying to load single csv file with two columns: ('label': str, 'text' str), where is label is str of two possible classes.
Below steps are similar with [this notebook](https://colab.research.google.com/drive/1-JIJlao4dI-Ilww_NnTc0rxtp-ymgDgM?usp=sharing), where bert model and tokenizer are used to classify lmdb loaded dataset. Only one difference it is the dataset loaded from .csv file.
Here is how I load it:
```python
data_path = 'data.csv'
data = pd.read_csv(data_path)
# process class name to indices
classes = ['neg', 'pos']
class_to_idx = { cl: i for i, cl in enumerate(classes) }
# now data is like {'label': int, 'text' str}
data['label'] = data['label'].apply(lambda x: class_to_idx[x])
# load dataset and map it with defined `tokenize` function
features = Features({
target: ClassLabel(num_classes=2, names=['neg', 'pos'], names_file=None, id=None),
feature: Value(dtype='string', id=None),
})
dataset = Dataset.from_pandas(data, features=features)
dataset.map(tokenize, batched=True, batch_size=len(dataset))
```
It ruins on the last line with following error:
```
---------------------------------------------------------------------------
AssertionError Traceback (most recent call last)
<ipython-input-112-32b6275ce418> in <module>()
9 })
10 dataset = Dataset.from_pandas(data, features=features)
---> 11 dataset.map(tokenizer, batched=True, batch_size=len(dataset))
2 frames
/usr/local/lib/python3.6/dist-packages/datasets/arrow_dataset.py in map(self, function, with_indices, input_columns, batched, batch_size, drop_last_batch, remove_columns, keep_in_memory, load_from_cache_file, cache_file_name, writer_batch_size, features, disable_nullable, fn_kwargs, num_proc, suffix_template, new_fingerprint)
1237 test_inputs = self[:2] if batched else self[0]
1238 test_indices = [0, 1] if batched else 0
-> 1239 update_data = does_function_return_dict(test_inputs, test_indices)
1240 logger.info("Testing finished, running the mapping function on the dataset")
1241
/usr/local/lib/python3.6/dist-packages/datasets/arrow_dataset.py in does_function_return_dict(inputs, indices)
1208 fn_args = [inputs] if input_columns is None else [inputs[col] for col in input_columns]
1209 processed_inputs = (
-> 1210 function(*fn_args, indices, **fn_kwargs) if with_indices else function(*fn_args, **fn_kwargs)
1211 )
1212 does_return_dict = isinstance(processed_inputs, Mapping)
/usr/local/lib/python3.6/dist-packages/transformers/tokenization_utils_base.py in __call__(self, text, text_pair, add_special_tokens, padding, truncation, max_length, stride, is_split_into_words, pad_to_multiple_of, return_tensors, return_token_type_ids, return_attention_mask, return_overflowing_tokens, return_special_tokens_mask, return_offsets_mapping, return_length, verbose, **kwargs)
2281 )
2282 ), (
-> 2283 "text input must of type `str` (single example), `List[str]` (batch or single pretokenized example) "
2284 "or `List[List[str]]` (batch of pretokenized examples)."
2285 )
AssertionError: text input must of type `str` (single example), `List[str]` (batch or single pretokenized example) or `List[List[str]]` (batch of pretokenized examples).
```
which I think is not expected. I also tried the same steps using `Dataset.from_csv` which resulted in the same error.
For reproducing this, I used [this dataset from kaggle](https://www.kaggle.com/team-ai/spam-text-message-classification)
Please could you post the whole script? I can't reproduce your issue. After updating the feature names/labels to match with the data, everything works fine for me. Try to update datasets/transformers to the newest version. | [
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https://github.com/huggingface/datasets/issues/1422 | Can't map dataset (loaded from csv) | Actually, the problem was how `tokenize` function was defined. This was completely my side mistake, so there are really no needs in this issue anymore | Hello! I am trying to load single csv file with two columns: ('label': str, 'text' str), where is label is str of two possible classes.
Below steps are similar with [this notebook](https://colab.research.google.com/drive/1-JIJlao4dI-Ilww_NnTc0rxtp-ymgDgM?usp=sharing), where bert model and tokenizer are used to classify lmdb loaded dataset. Only one difference it is the dataset loaded from .csv file.
Here is how I load it:
```python
data_path = 'data.csv'
data = pd.read_csv(data_path)
# process class name to indices
classes = ['neg', 'pos']
class_to_idx = { cl: i for i, cl in enumerate(classes) }
# now data is like {'label': int, 'text' str}
data['label'] = data['label'].apply(lambda x: class_to_idx[x])
# load dataset and map it with defined `tokenize` function
features = Features({
target: ClassLabel(num_classes=2, names=['neg', 'pos'], names_file=None, id=None),
feature: Value(dtype='string', id=None),
})
dataset = Dataset.from_pandas(data, features=features)
dataset.map(tokenize, batched=True, batch_size=len(dataset))
```
It ruins on the last line with following error:
```
---------------------------------------------------------------------------
AssertionError Traceback (most recent call last)
<ipython-input-112-32b6275ce418> in <module>()
9 })
10 dataset = Dataset.from_pandas(data, features=features)
---> 11 dataset.map(tokenizer, batched=True, batch_size=len(dataset))
2 frames
/usr/local/lib/python3.6/dist-packages/datasets/arrow_dataset.py in map(self, function, with_indices, input_columns, batched, batch_size, drop_last_batch, remove_columns, keep_in_memory, load_from_cache_file, cache_file_name, writer_batch_size, features, disable_nullable, fn_kwargs, num_proc, suffix_template, new_fingerprint)
1237 test_inputs = self[:2] if batched else self[0]
1238 test_indices = [0, 1] if batched else 0
-> 1239 update_data = does_function_return_dict(test_inputs, test_indices)
1240 logger.info("Testing finished, running the mapping function on the dataset")
1241
/usr/local/lib/python3.6/dist-packages/datasets/arrow_dataset.py in does_function_return_dict(inputs, indices)
1208 fn_args = [inputs] if input_columns is None else [inputs[col] for col in input_columns]
1209 processed_inputs = (
-> 1210 function(*fn_args, indices, **fn_kwargs) if with_indices else function(*fn_args, **fn_kwargs)
1211 )
1212 does_return_dict = isinstance(processed_inputs, Mapping)
/usr/local/lib/python3.6/dist-packages/transformers/tokenization_utils_base.py in __call__(self, text, text_pair, add_special_tokens, padding, truncation, max_length, stride, is_split_into_words, pad_to_multiple_of, return_tensors, return_token_type_ids, return_attention_mask, return_overflowing_tokens, return_special_tokens_mask, return_offsets_mapping, return_length, verbose, **kwargs)
2281 )
2282 ), (
-> 2283 "text input must of type `str` (single example), `List[str]` (batch or single pretokenized example) "
2284 "or `List[List[str]]` (batch of pretokenized examples)."
2285 )
AssertionError: text input must of type `str` (single example), `List[str]` (batch or single pretokenized example) or `List[List[str]]` (batch of pretokenized examples).
```
which I think is not expected. I also tried the same steps using `Dataset.from_csv` which resulted in the same error.
For reproducing this, I used [this dataset from kaggle](https://www.kaggle.com/team-ai/spam-text-message-classification) | 25 | Can't map dataset (loaded from csv)
Hello! I am trying to load single csv file with two columns: ('label': str, 'text' str), where is label is str of two possible classes.
Below steps are similar with [this notebook](https://colab.research.google.com/drive/1-JIJlao4dI-Ilww_NnTc0rxtp-ymgDgM?usp=sharing), where bert model and tokenizer are used to classify lmdb loaded dataset. Only one difference it is the dataset loaded from .csv file.
Here is how I load it:
```python
data_path = 'data.csv'
data = pd.read_csv(data_path)
# process class name to indices
classes = ['neg', 'pos']
class_to_idx = { cl: i for i, cl in enumerate(classes) }
# now data is like {'label': int, 'text' str}
data['label'] = data['label'].apply(lambda x: class_to_idx[x])
# load dataset and map it with defined `tokenize` function
features = Features({
target: ClassLabel(num_classes=2, names=['neg', 'pos'], names_file=None, id=None),
feature: Value(dtype='string', id=None),
})
dataset = Dataset.from_pandas(data, features=features)
dataset.map(tokenize, batched=True, batch_size=len(dataset))
```
It ruins on the last line with following error:
```
---------------------------------------------------------------------------
AssertionError Traceback (most recent call last)
<ipython-input-112-32b6275ce418> in <module>()
9 })
10 dataset = Dataset.from_pandas(data, features=features)
---> 11 dataset.map(tokenizer, batched=True, batch_size=len(dataset))
2 frames
/usr/local/lib/python3.6/dist-packages/datasets/arrow_dataset.py in map(self, function, with_indices, input_columns, batched, batch_size, drop_last_batch, remove_columns, keep_in_memory, load_from_cache_file, cache_file_name, writer_batch_size, features, disable_nullable, fn_kwargs, num_proc, suffix_template, new_fingerprint)
1237 test_inputs = self[:2] if batched else self[0]
1238 test_indices = [0, 1] if batched else 0
-> 1239 update_data = does_function_return_dict(test_inputs, test_indices)
1240 logger.info("Testing finished, running the mapping function on the dataset")
1241
/usr/local/lib/python3.6/dist-packages/datasets/arrow_dataset.py in does_function_return_dict(inputs, indices)
1208 fn_args = [inputs] if input_columns is None else [inputs[col] for col in input_columns]
1209 processed_inputs = (
-> 1210 function(*fn_args, indices, **fn_kwargs) if with_indices else function(*fn_args, **fn_kwargs)
1211 )
1212 does_return_dict = isinstance(processed_inputs, Mapping)
/usr/local/lib/python3.6/dist-packages/transformers/tokenization_utils_base.py in __call__(self, text, text_pair, add_special_tokens, padding, truncation, max_length, stride, is_split_into_words, pad_to_multiple_of, return_tensors, return_token_type_ids, return_attention_mask, return_overflowing_tokens, return_special_tokens_mask, return_offsets_mapping, return_length, verbose, **kwargs)
2281 )
2282 ), (
-> 2283 "text input must of type `str` (single example), `List[str]` (batch or single pretokenized example) "
2284 "or `List[List[str]]` (batch of pretokenized examples)."
2285 )
AssertionError: text input must of type `str` (single example), `List[str]` (batch or single pretokenized example) or `List[List[str]]` (batch of pretokenized examples).
```
which I think is not expected. I also tried the same steps using `Dataset.from_csv` which resulted in the same error.
For reproducing this, I used [this dataset from kaggle](https://www.kaggle.com/team-ai/spam-text-message-classification)
Actually, the problem was how `tokenize` function was defined. This was completely my side mistake, so there are really no needs in this issue anymore | [
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https://github.com/huggingface/datasets/issues/1324 | ❓ Sharing ElasticSearch indexed dataset | Hello @pietrolesci , I am not sure to understand what you are trying to do here.
If you're looking for ways to save a dataset on disk, you can you the `save_to_disk` method:
```python
>>> import datasets
>>> loaded_dataset = datasets.load("dataset_name")
>>> loaded_dataset.save_to_disk("/path/on/your/disk")
```
The saved dataset can later be retrieved using:
```python
>>> loaded_dataset = datasets.Dataset.load_from_disk("/path/on/your/disk")
```
Also, I'd recommend posting your question directly in the issue section of the [elasticsearch repo](https://github.com/elastic/elasticsearch) | Hi there,
First of all, thank you very much for this amazing library. Datasets have become my preferred data structure for basically everything I am currently doing.
**Question:** I'm working with a dataset and I have an elasticsearch container running at localhost:9200. I added an elasticsearch index and I was wondering
- how can I know where it has been saved?
- how can I share the indexed dataset with others?
I tried to dig into the docs, but could not find anything about that.
Thank you very much for your help.
Best,
Pietro
Edit: apologies for the wrong label | 73 | ❓ Sharing ElasticSearch indexed dataset
Hi there,
First of all, thank you very much for this amazing library. Datasets have become my preferred data structure for basically everything I am currently doing.
**Question:** I'm working with a dataset and I have an elasticsearch container running at localhost:9200. I added an elasticsearch index and I was wondering
- how can I know where it has been saved?
- how can I share the indexed dataset with others?
I tried to dig into the docs, but could not find anything about that.
Thank you very much for your help.
Best,
Pietro
Edit: apologies for the wrong label
Hello @pietrolesci , I am not sure to understand what you are trying to do here.
If you're looking for ways to save a dataset on disk, you can you the `save_to_disk` method:
```python
>>> import datasets
>>> loaded_dataset = datasets.load("dataset_name")
>>> loaded_dataset.save_to_disk("/path/on/your/disk")
```
The saved dataset can later be retrieved using:
```python
>>> loaded_dataset = datasets.Dataset.load_from_disk("/path/on/your/disk")
```
Also, I'd recommend posting your question directly in the issue section of the [elasticsearch repo](https://github.com/elastic/elasticsearch) | [
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https://github.com/huggingface/datasets/issues/1324 | ❓ Sharing ElasticSearch indexed dataset | Hi @SBrandeis,
Thanks a lot for picking up my request.
Maybe I can clarify my use-case with a bit of context. Say I have the IMDb dataset. I create an ES index on it. Now I can save and reload the dataset from disk normally. Once I reload the dataset, it is easy to retrieve the ES index on my machine. I was wondering: is there a way I can share the (now) indexed version of the IMDb dataset with my colleagues without requiring them to re-index it?
Thanks a lot in advance for your consideration.
Best,
Pietro | Hi there,
First of all, thank you very much for this amazing library. Datasets have become my preferred data structure for basically everything I am currently doing.
**Question:** I'm working with a dataset and I have an elasticsearch container running at localhost:9200. I added an elasticsearch index and I was wondering
- how can I know where it has been saved?
- how can I share the indexed dataset with others?
I tried to dig into the docs, but could not find anything about that.
Thank you very much for your help.
Best,
Pietro
Edit: apologies for the wrong label | 98 | ❓ Sharing ElasticSearch indexed dataset
Hi there,
First of all, thank you very much for this amazing library. Datasets have become my preferred data structure for basically everything I am currently doing.
**Question:** I'm working with a dataset and I have an elasticsearch container running at localhost:9200. I added an elasticsearch index and I was wondering
- how can I know where it has been saved?
- how can I share the indexed dataset with others?
I tried to dig into the docs, but could not find anything about that.
Thank you very much for your help.
Best,
Pietro
Edit: apologies for the wrong label
Hi @SBrandeis,
Thanks a lot for picking up my request.
Maybe I can clarify my use-case with a bit of context. Say I have the IMDb dataset. I create an ES index on it. Now I can save and reload the dataset from disk normally. Once I reload the dataset, it is easy to retrieve the ES index on my machine. I was wondering: is there a way I can share the (now) indexed version of the IMDb dataset with my colleagues without requiring them to re-index it?
Thanks a lot in advance for your consideration.
Best,
Pietro | [
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] |
https://github.com/huggingface/datasets/issues/1324 | ❓ Sharing ElasticSearch indexed dataset | Thanks for the clarification.
I am not familiar with ElasticSearch, but if I understand well you're trying to migrate your data along with the ES index.
My advice would be to check out ES documentation, for instance, this might help you: https://www.elastic.co/guide/en/cloud/current/ec-migrate-data.html
Let me know if it helps | Hi there,
First of all, thank you very much for this amazing library. Datasets have become my preferred data structure for basically everything I am currently doing.
**Question:** I'm working with a dataset and I have an elasticsearch container running at localhost:9200. I added an elasticsearch index and I was wondering
- how can I know where it has been saved?
- how can I share the indexed dataset with others?
I tried to dig into the docs, but could not find anything about that.
Thank you very much for your help.
Best,
Pietro
Edit: apologies for the wrong label | 48 | ❓ Sharing ElasticSearch indexed dataset
Hi there,
First of all, thank you very much for this amazing library. Datasets have become my preferred data structure for basically everything I am currently doing.
**Question:** I'm working with a dataset and I have an elasticsearch container running at localhost:9200. I added an elasticsearch index and I was wondering
- how can I know where it has been saved?
- how can I share the indexed dataset with others?
I tried to dig into the docs, but could not find anything about that.
Thank you very much for your help.
Best,
Pietro
Edit: apologies for the wrong label
Thanks for the clarification.
I am not familiar with ElasticSearch, but if I understand well you're trying to migrate your data along with the ES index.
My advice would be to check out ES documentation, for instance, this might help you: https://www.elastic.co/guide/en/cloud/current/ec-migrate-data.html
Let me know if it helps | [
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https://github.com/huggingface/datasets/issues/1299 | can't load "german_legal_entity_recognition" dataset | Please if you could tell me more about the error?
1. Please check the directory you've been working on
2. Check for any typos | FileNotFoundError: Couldn't find file locally at german_legal_entity_recognition/german_legal_entity_recognition.py, or remotely at https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/german_legal_entity_recognition/german_legal_entity_recognition.py or https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/german_legal_entity_recognition/german_legal_entity_recognition.py
| 24 | can't load "german_legal_entity_recognition" dataset
FileNotFoundError: Couldn't find file locally at german_legal_entity_recognition/german_legal_entity_recognition.py, or remotely at https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/german_legal_entity_recognition/german_legal_entity_recognition.py or https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/german_legal_entity_recognition/german_legal_entity_recognition.py
Please if you could tell me more about the error?
1. Please check the directory you've been working on
2. Check for any typos | [
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https://github.com/huggingface/datasets/issues/1299 | can't load "german_legal_entity_recognition" dataset | > Please if you could tell me more about the error?
>
> 1. Please check the directory you've been working on
> 2. Check for any typos
Error happens during the execution of this line:
dataset = load_dataset("german_legal_entity_recognition")
Also, when I try to open mentioned links via Opera I have errors "404: Not Found" and "This XML file does not appear to have any style information associated with it. The document tree is shown below." respectively. | FileNotFoundError: Couldn't find file locally at german_legal_entity_recognition/german_legal_entity_recognition.py, or remotely at https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/german_legal_entity_recognition/german_legal_entity_recognition.py or https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/german_legal_entity_recognition/german_legal_entity_recognition.py
| 77 | can't load "german_legal_entity_recognition" dataset
FileNotFoundError: Couldn't find file locally at german_legal_entity_recognition/german_legal_entity_recognition.py, or remotely at https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/german_legal_entity_recognition/german_legal_entity_recognition.py or https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/german_legal_entity_recognition/german_legal_entity_recognition.py
> Please if you could tell me more about the error?
>
> 1. Please check the directory you've been working on
> 2. Check for any typos
Error happens during the execution of this line:
dataset = load_dataset("german_legal_entity_recognition")
Also, when I try to open mentioned links via Opera I have errors "404: Not Found" and "This XML file does not appear to have any style information associated with it. The document tree is shown below." respectively. | [
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https://github.com/huggingface/datasets/issues/1299 | can't load "german_legal_entity_recognition" dataset | Hello @nataly-obr, the `german_legal_entity_recognition` dataset has not yet been released (it is part of the coming soon v2 release).
You can still access it now if you want, but you will need to install `datasets` via the master branch:
`pip install git+https://github.com/huggingface/datasets.git@master`
Please let me know if it solves the issue :) | FileNotFoundError: Couldn't find file locally at german_legal_entity_recognition/german_legal_entity_recognition.py, or remotely at https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/german_legal_entity_recognition/german_legal_entity_recognition.py or https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/german_legal_entity_recognition/german_legal_entity_recognition.py
| 52 | can't load "german_legal_entity_recognition" dataset
FileNotFoundError: Couldn't find file locally at german_legal_entity_recognition/german_legal_entity_recognition.py, or remotely at https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/german_legal_entity_recognition/german_legal_entity_recognition.py or https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/german_legal_entity_recognition/german_legal_entity_recognition.py
Hello @nataly-obr, the `german_legal_entity_recognition` dataset has not yet been released (it is part of the coming soon v2 release).
You can still access it now if you want, but you will need to install `datasets` via the master branch:
`pip install git+https://github.com/huggingface/datasets.git@master`
Please let me know if it solves the issue :) | [
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] |
https://github.com/huggingface/datasets/issues/1290 | imdb dataset cannot be downloaded | Hi @rabeehk , I am unable to reproduce your problem locally.
Can you try emptying the cache (removing the content of `/idiap/temp/rkarimi/cache_home_1/datasets`) and retry ? | hi
please find error below getting imdb train spli:
thanks
`
datasets.load_dataset>>> datasets.load_dataset("imdb", split="train")`
errors
```
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
Downloading and preparing dataset imdb/plain_text (download: 80.23 MiB, generated: 127.06 MiB, post-processed: Unknown size, total: 207.28 MiB) to /idiap/temp/rkarimi/cache_home_1/datasets/imdb/plain_text/1.0.0/90099cb476936b753383ba2ae6ab2eae419b2e87f71cd5189cb9c8e5814d12a3...
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets/downloads
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 558, in _download_and_prepare
verify_splits(self.info.splits, split_dict)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/info_utils.py", line 73, in verify_splits
raise NonMatchingSplitsSizesError(str(bad_splits))
datasets.utils.info_utils.NonMatchingSplitsSizesError: [{'expected': SplitInfo(name='unsupervised', num_bytes=67125548, num_examples=50000, dataset_name='imdb'), 'recorded': SplitInfo(name='unsupervised', num_bytes=7486451, num_examples=5628, dataset_name='imdb')}]
``` | 25 | imdb dataset cannot be downloaded
hi
please find error below getting imdb train spli:
thanks
`
datasets.load_dataset>>> datasets.load_dataset("imdb", split="train")`
errors
```
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
Downloading and preparing dataset imdb/plain_text (download: 80.23 MiB, generated: 127.06 MiB, post-processed: Unknown size, total: 207.28 MiB) to /idiap/temp/rkarimi/cache_home_1/datasets/imdb/plain_text/1.0.0/90099cb476936b753383ba2ae6ab2eae419b2e87f71cd5189cb9c8e5814d12a3...
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets/downloads
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 558, in _download_and_prepare
verify_splits(self.info.splits, split_dict)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/info_utils.py", line 73, in verify_splits
raise NonMatchingSplitsSizesError(str(bad_splits))
datasets.utils.info_utils.NonMatchingSplitsSizesError: [{'expected': SplitInfo(name='unsupervised', num_bytes=67125548, num_examples=50000, dataset_name='imdb'), 'recorded': SplitInfo(name='unsupervised', num_bytes=7486451, num_examples=5628, dataset_name='imdb')}]
```
Hi @rabeehk , I am unable to reproduce your problem locally.
Can you try emptying the cache (removing the content of `/idiap/temp/rkarimi/cache_home_1/datasets`) and retry ? | [
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] |
https://github.com/huggingface/datasets/issues/1290 | imdb dataset cannot be downloaded | Hi,
thanks, I did remove the cache and still the same error here
```
>>> a = datasets.load_dataset("imdb", split="train")
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
Downloading and preparing dataset imdb/plain_text (download: 80.23 MiB, generated: 127.06 MiB, post-processed: Unknown size, total: 207.28 MiB) to /idiap/temp/rkarimi/cache_home_1/datasets/imdb/plain_text/1.0.0/90099cb476936b753383ba2ae6ab2eae419b2e87f71cd5189cb9c8e5814d12a3...
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets/downloads
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 558, in _download_and_prepare
verify_splits(self.info.splits, split_dict)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/info_utils.py", line 73, in verify_splits
raise NonMatchingSplitsSizesError(str(bad_splits))
datasets.utils.info_utils.NonMatchingSplitsSizesError: [{'expected': SplitInfo(name='unsupervised', num_bytes=67125548, num_examples=50000, dataset_name='imdb'), 'recorded': SplitInfo(name='unsupervised', num_bytes=4902716, num_examples=3680, dataset_name='imdb')}]
```
datasets version
```
datasets 1.1.2 <pip>
tensorflow-datasets 4.1.0 <pip>
``` | hi
please find error below getting imdb train spli:
thanks
`
datasets.load_dataset>>> datasets.load_dataset("imdb", split="train")`
errors
```
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
Downloading and preparing dataset imdb/plain_text (download: 80.23 MiB, generated: 127.06 MiB, post-processed: Unknown size, total: 207.28 MiB) to /idiap/temp/rkarimi/cache_home_1/datasets/imdb/plain_text/1.0.0/90099cb476936b753383ba2ae6ab2eae419b2e87f71cd5189cb9c8e5814d12a3...
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets/downloads
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 558, in _download_and_prepare
verify_splits(self.info.splits, split_dict)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/info_utils.py", line 73, in verify_splits
raise NonMatchingSplitsSizesError(str(bad_splits))
datasets.utils.info_utils.NonMatchingSplitsSizesError: [{'expected': SplitInfo(name='unsupervised', num_bytes=67125548, num_examples=50000, dataset_name='imdb'), 'recorded': SplitInfo(name='unsupervised', num_bytes=7486451, num_examples=5628, dataset_name='imdb')}]
``` | 115 | imdb dataset cannot be downloaded
hi
please find error below getting imdb train spli:
thanks
`
datasets.load_dataset>>> datasets.load_dataset("imdb", split="train")`
errors
```
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
Downloading and preparing dataset imdb/plain_text (download: 80.23 MiB, generated: 127.06 MiB, post-processed: Unknown size, total: 207.28 MiB) to /idiap/temp/rkarimi/cache_home_1/datasets/imdb/plain_text/1.0.0/90099cb476936b753383ba2ae6ab2eae419b2e87f71cd5189cb9c8e5814d12a3...
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets/downloads
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 558, in _download_and_prepare
verify_splits(self.info.splits, split_dict)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/info_utils.py", line 73, in verify_splits
raise NonMatchingSplitsSizesError(str(bad_splits))
datasets.utils.info_utils.NonMatchingSplitsSizesError: [{'expected': SplitInfo(name='unsupervised', num_bytes=67125548, num_examples=50000, dataset_name='imdb'), 'recorded': SplitInfo(name='unsupervised', num_bytes=7486451, num_examples=5628, dataset_name='imdb')}]
```
Hi,
thanks, I did remove the cache and still the same error here
```
>>> a = datasets.load_dataset("imdb", split="train")
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
Downloading and preparing dataset imdb/plain_text (download: 80.23 MiB, generated: 127.06 MiB, post-processed: Unknown size, total: 207.28 MiB) to /idiap/temp/rkarimi/cache_home_1/datasets/imdb/plain_text/1.0.0/90099cb476936b753383ba2ae6ab2eae419b2e87f71cd5189cb9c8e5814d12a3...
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets/downloads
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 558, in _download_and_prepare
verify_splits(self.info.splits, split_dict)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/info_utils.py", line 73, in verify_splits
raise NonMatchingSplitsSizesError(str(bad_splits))
datasets.utils.info_utils.NonMatchingSplitsSizesError: [{'expected': SplitInfo(name='unsupervised', num_bytes=67125548, num_examples=50000, dataset_name='imdb'), 'recorded': SplitInfo(name='unsupervised', num_bytes=4902716, num_examples=3680, dataset_name='imdb')}]
```
datasets version
```
datasets 1.1.2 <pip>
tensorflow-datasets 4.1.0 <pip>
``` | [
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https://github.com/huggingface/datasets/issues/1287 | 'iwslt2017-ro-nl', cannot be downloaded | Looks like the data has been moved from its original location to google drive
New url: https://drive.google.com/u/0/uc?id=12ycYSzLIG253AFN35Y6qoyf9wtkOjakp&export=download | Hi
I am trying
`>>> datasets.load_dataset("iwslt2017", 'iwslt2017-ro-nl', split="train")`
getting this error thank you for your help
```
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
Downloading and preparing dataset iwsl_t217/iwslt2017-ro-nl (download: 314.07 MiB, generated: 39.92 MiB, post-processed: Unknown size, total: 354.00 MiB) to /idiap/temp/rkarimi/cache_home_1/datasets/iwsl_t217/iwslt2017-ro-nl/1.0.0/cca6935a0851a8ceac1202a62c958738bdfa23c57a51bc52ac1c5ebd2aa172cd...
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets/downloads
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 531, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File " /idiap/home/rkarimi/.cache/huggingface/modules/datasets_modules/datasets/iwslt2017/cca6935a0851a8ceac1202a62c958738bdfa23c57a51bc52ac1c5ebd2aa172cd/iwslt2017.py", line 118, in _split_generators
dl_dir = dl_manager.download_and_extract(MULTI_URL)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/download_manager.py", line 254, in download_and_extract
return self.extract(self.download(url_or_urls))
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/download_manager.py", line 179, in download
num_proc=download_config.num_proc,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/py_utils.py", line 216, in map_nested
return function(data_struct)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/file_utils.py", line 308, in cached_path
use_etag=download_config.use_etag,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/file_utils.py", line 477, in get_from_cache
raise ConnectionError("Couldn't reach {}".format(url))
ConnectionError: Couldn't reach https://wit3.fbk.eu/archive/2017-01-trnmted//texts/DeEnItNlRo/DeEnItNlRo/DeEnItNlRo-DeEnItNlRo.tgz
``` | 17 | 'iwslt2017-ro-nl', cannot be downloaded
Hi
I am trying
`>>> datasets.load_dataset("iwslt2017", 'iwslt2017-ro-nl', split="train")`
getting this error thank you for your help
```
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
Downloading and preparing dataset iwsl_t217/iwslt2017-ro-nl (download: 314.07 MiB, generated: 39.92 MiB, post-processed: Unknown size, total: 354.00 MiB) to /idiap/temp/rkarimi/cache_home_1/datasets/iwsl_t217/iwslt2017-ro-nl/1.0.0/cca6935a0851a8ceac1202a62c958738bdfa23c57a51bc52ac1c5ebd2aa172cd...
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets/downloads
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 531, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File " /idiap/home/rkarimi/.cache/huggingface/modules/datasets_modules/datasets/iwslt2017/cca6935a0851a8ceac1202a62c958738bdfa23c57a51bc52ac1c5ebd2aa172cd/iwslt2017.py", line 118, in _split_generators
dl_dir = dl_manager.download_and_extract(MULTI_URL)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/download_manager.py", line 254, in download_and_extract
return self.extract(self.download(url_or_urls))
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/download_manager.py", line 179, in download
num_proc=download_config.num_proc,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/py_utils.py", line 216, in map_nested
return function(data_struct)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/file_utils.py", line 308, in cached_path
use_etag=download_config.use_etag,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/file_utils.py", line 477, in get_from_cache
raise ConnectionError("Couldn't reach {}".format(url))
ConnectionError: Couldn't reach https://wit3.fbk.eu/archive/2017-01-trnmted//texts/DeEnItNlRo/DeEnItNlRo/DeEnItNlRo-DeEnItNlRo.tgz
```
Looks like the data has been moved from its original location to google drive
New url: https://drive.google.com/u/0/uc?id=12ycYSzLIG253AFN35Y6qoyf9wtkOjakp&export=download | [
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https://github.com/huggingface/datasets/issues/1286 | [libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0): terminate called after throwing an instance of 'google::protobuf::FatalException' what(): CHECK failed: (index) >= (0): Aborted | I remember also getting the same issue for several other translation datasets like all the iwslt2017 group, this is blokcing me and I really need to fix it and I was wondering if you have an idea on this. @lhoestq thanks,. | Hi
I am getting this error when evaluating on wmt16-ro-en using finetune_trainer.py of huggingface repo. thank for your help
{'epoch': 20.0}
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 20/20 [00:16<00:00, 1.22it/s]
12/08/2020 10:41:19 - INFO - seq2seq.trainers.trainer - Saving model checkpoint to outputs/experiment/joint/finetune/lr-2e-5
12/08/2020 10:41:24 - INFO - __main__ - {'wmt16-en-ro': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 1998), 'qnli': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 5462), 'scitail': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 1303)}
12/08/2020 10:41:24 - INFO - __main__ - *** Evaluate ***
12/08/2020 10:41:24 - INFO - seq2seq.utils.utils - using task specific params for wmt16-en-ro: {'max_length': 300, 'num_beams': 4}
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - ***** Running Evaluation *****
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - Num examples = 1998
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - Batch size = 64
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 32/32 [00:37<00:00, 1.19s/it][libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0):
terminate called after throwing an instance of 'google::protobuf::FatalException'
what(): CHECK failed: (index) >= (0):
Aborted
| 41 | [libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0): terminate called after throwing an instance of 'google::protobuf::FatalException' what(): CHECK failed: (index) >= (0): Aborted
Hi
I am getting this error when evaluating on wmt16-ro-en using finetune_trainer.py of huggingface repo. thank for your help
{'epoch': 20.0}
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 20/20 [00:16<00:00, 1.22it/s]
12/08/2020 10:41:19 - INFO - seq2seq.trainers.trainer - Saving model checkpoint to outputs/experiment/joint/finetune/lr-2e-5
12/08/2020 10:41:24 - INFO - __main__ - {'wmt16-en-ro': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 1998), 'qnli': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 5462), 'scitail': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 1303)}
12/08/2020 10:41:24 - INFO - __main__ - *** Evaluate ***
12/08/2020 10:41:24 - INFO - seq2seq.utils.utils - using task specific params for wmt16-en-ro: {'max_length': 300, 'num_beams': 4}
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - ***** Running Evaluation *****
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - Num examples = 1998
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - Batch size = 64
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 32/32 [00:37<00:00, 1.19s/it][libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0):
terminate called after throwing an instance of 'google::protobuf::FatalException'
what(): CHECK failed: (index) >= (0):
Aborted
I remember also getting the same issue for several other translation datasets like all the iwslt2017 group, this is blokcing me and I really need to fix it and I was wondering if you have an idea on this. @lhoestq thanks,. | [
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https://github.com/huggingface/datasets/issues/1286 | [libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0): terminate called after throwing an instance of 'google::protobuf::FatalException' what(): CHECK failed: (index) >= (0): Aborted | maybe there is an empty line or something inside these datasets? could you tell me why this is happening? thanks | Hi
I am getting this error when evaluating on wmt16-ro-en using finetune_trainer.py of huggingface repo. thank for your help
{'epoch': 20.0}
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 20/20 [00:16<00:00, 1.22it/s]
12/08/2020 10:41:19 - INFO - seq2seq.trainers.trainer - Saving model checkpoint to outputs/experiment/joint/finetune/lr-2e-5
12/08/2020 10:41:24 - INFO - __main__ - {'wmt16-en-ro': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 1998), 'qnli': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 5462), 'scitail': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 1303)}
12/08/2020 10:41:24 - INFO - __main__ - *** Evaluate ***
12/08/2020 10:41:24 - INFO - seq2seq.utils.utils - using task specific params for wmt16-en-ro: {'max_length': 300, 'num_beams': 4}
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - ***** Running Evaluation *****
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - Num examples = 1998
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - Batch size = 64
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 32/32 [00:37<00:00, 1.19s/it][libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0):
terminate called after throwing an instance of 'google::protobuf::FatalException'
what(): CHECK failed: (index) >= (0):
Aborted
| 20 | [libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0): terminate called after throwing an instance of 'google::protobuf::FatalException' what(): CHECK failed: (index) >= (0): Aborted
Hi
I am getting this error when evaluating on wmt16-ro-en using finetune_trainer.py of huggingface repo. thank for your help
{'epoch': 20.0}
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 20/20 [00:16<00:00, 1.22it/s]
12/08/2020 10:41:19 - INFO - seq2seq.trainers.trainer - Saving model checkpoint to outputs/experiment/joint/finetune/lr-2e-5
12/08/2020 10:41:24 - INFO - __main__ - {'wmt16-en-ro': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 1998), 'qnli': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 5462), 'scitail': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 1303)}
12/08/2020 10:41:24 - INFO - __main__ - *** Evaluate ***
12/08/2020 10:41:24 - INFO - seq2seq.utils.utils - using task specific params for wmt16-en-ro: {'max_length': 300, 'num_beams': 4}
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - ***** Running Evaluation *****
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - Num examples = 1998
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - Batch size = 64
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 32/32 [00:37<00:00, 1.19s/it][libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0):
terminate called after throwing an instance of 'google::protobuf::FatalException'
what(): CHECK failed: (index) >= (0):
Aborted
maybe there is an empty line or something inside these datasets? could you tell me why this is happening? thanks | [
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https://github.com/huggingface/datasets/issues/1286 | [libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0): terminate called after throwing an instance of 'google::protobuf::FatalException' what(): CHECK failed: (index) >= (0): Aborted | I just checked and the wmt16 en-ro doesn't have empty lines
```python
from datasets import load_dataset
d = load_dataset("wmt16", "ro-en", split="train")
len(d) # 610320
len(d.filter(lambda x: len(x["translation"]["en"].strip()) > 0)) # 610320
len(d.filter(lambda x: len(x["translation"]["ro"].strip()) > 0)) # 610320
# also tested for split="validation" and "test"
```
Can you open an issue on the `transformers` repo ? also cc @sgugger | Hi
I am getting this error when evaluating on wmt16-ro-en using finetune_trainer.py of huggingface repo. thank for your help
{'epoch': 20.0}
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 20/20 [00:16<00:00, 1.22it/s]
12/08/2020 10:41:19 - INFO - seq2seq.trainers.trainer - Saving model checkpoint to outputs/experiment/joint/finetune/lr-2e-5
12/08/2020 10:41:24 - INFO - __main__ - {'wmt16-en-ro': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 1998), 'qnli': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 5462), 'scitail': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 1303)}
12/08/2020 10:41:24 - INFO - __main__ - *** Evaluate ***
12/08/2020 10:41:24 - INFO - seq2seq.utils.utils - using task specific params for wmt16-en-ro: {'max_length': 300, 'num_beams': 4}
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - ***** Running Evaluation *****
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - Num examples = 1998
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - Batch size = 64
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 32/32 [00:37<00:00, 1.19s/it][libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0):
terminate called after throwing an instance of 'google::protobuf::FatalException'
what(): CHECK failed: (index) >= (0):
Aborted
| 59 | [libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0): terminate called after throwing an instance of 'google::protobuf::FatalException' what(): CHECK failed: (index) >= (0): Aborted
Hi
I am getting this error when evaluating on wmt16-ro-en using finetune_trainer.py of huggingface repo. thank for your help
{'epoch': 20.0}
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 20/20 [00:16<00:00, 1.22it/s]
12/08/2020 10:41:19 - INFO - seq2seq.trainers.trainer - Saving model checkpoint to outputs/experiment/joint/finetune/lr-2e-5
12/08/2020 10:41:24 - INFO - __main__ - {'wmt16-en-ro': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 1998), 'qnli': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 5462), 'scitail': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 1303)}
12/08/2020 10:41:24 - INFO - __main__ - *** Evaluate ***
12/08/2020 10:41:24 - INFO - seq2seq.utils.utils - using task specific params for wmt16-en-ro: {'max_length': 300, 'num_beams': 4}
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - ***** Running Evaluation *****
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - Num examples = 1998
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - Batch size = 64
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 32/32 [00:37<00:00, 1.19s/it][libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0):
terminate called after throwing an instance of 'google::protobuf::FatalException'
what(): CHECK failed: (index) >= (0):
Aborted
I just checked and the wmt16 en-ro doesn't have empty lines
```python
from datasets import load_dataset
d = load_dataset("wmt16", "ro-en", split="train")
len(d) # 610320
len(d.filter(lambda x: len(x["translation"]["en"].strip()) > 0)) # 610320
len(d.filter(lambda x: len(x["translation"]["ro"].strip()) > 0)) # 610320
# also tested for split="validation" and "test"
```
Can you open an issue on the `transformers` repo ? also cc @sgugger | [
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https://github.com/huggingface/datasets/issues/1286 | [libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0): terminate called after throwing an instance of 'google::protobuf::FatalException' what(): CHECK failed: (index) >= (0): Aborted | Hi @lhoestq
I am not really sure which part is causing this, to me this is more related to dataset library as this is happening for some of the datassets below please find the information to reprodcue the bug, this is really blocking me and I appreciate your help
## Environment info
- `transformers` version: 3.5.1
- Platform: GPU
- Python version: 3.7
- PyTorch version (GPU?): 1.0.4
- Tensorflow version (GPU?): -
- Using GPU in script?: -
- Using distributed or parallel set-up in script?: -
### Who can help
tokenizers: @mfuntowicz
Trainer: @sgugger
TextGeneration: @TevenLeScao
nlp datasets: [different repo](https://github.com/huggingface/nlp)
rust tokenizers: [different repo](https://github.com/huggingface/tokenizers)
examples/seq2seq: @patil-suraj
## Information
Hi
I am testing seq2seq model with T5 on different datasets and this is always getting the following bug, this is really blocking me as this fails for many datasets. could you have a look please? thanks
```
[libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0):
terminate called after throwing an instance of 'google::protobuf::FatalException'
what(): CHECK failed: (index) >= (0):
Aborted
```
To reproduce the error please run on 1 GPU:
```
git clone [email protected]:rabeehk/debug-seq2seq.git
python setup.py develop
cd seq2seq
python finetune_t5_trainer.py temp.json
```
Full output of the program:
```
(internship) rkarimi@vgnh008:/idiap/user/rkarimi/dev/debug-seq2seq/seq2seq$ python finetune_t5_trainer.py temp.json
2020-12-12 15:38:16.234542: W tensorflow/stream_executor/platform/default/dso_loader.cc:60] Could not load dynamic library 'libcudart.so.11.0'; dlerror: libcudart.so.11.0: cannot open shared object file: No such file or directory
2020-12-12 15:38:16.234598: I tensorflow/stream_executor/cuda/cudart_stub.cc:29] Ignore above cudart dlerror if you do not have a GPU set up on your machine.
12/12/2020 15:38:32 - WARNING - __main__ - Process rank: -1, device: cuda:0, n_gpu: 1, distributed training: False, 16-bits training: False
12/12/2020 15:38:32 - INFO - __main__ - Training/evaluation parameters Seq2SeqTrainingArguments(output_dir='outputs/test', overwrite_output_dir=True, do_train=True, do_eval=True, do_predict=False, evaluate_during_training=False, evaluation_strategy=<EvaluationStrategy.NO: 'no'>, prediction_loss_only=False, per_device_train_batch_size=64, per_device_eval_batch_size=64, per_gpu_train_batch_size=None, per_gpu_eval_batch_size=None, gradient_accumulation_steps=1, eval_accumulation_steps=None, learning_rate=0.01, weight_decay=0.0, adam_beta1=0.9, adam_beta2=0.999, adam_epsilon=1e-08, max_grad_norm=1.0, num_train_epochs=2, max_steps=-1, warmup_steps=500, logging_dir='runs/Dec12_15-38-32_vgnh008', logging_first_step=True, logging_steps=200, save_steps=200, save_total_limit=1, no_cuda=False, seed=42, fp16=False, fp16_opt_level='O1', local_rank=-1, tpu_num_cores=None, tpu_metrics_debug=False, debug=False, dataloader_drop_last=False, eval_steps=200, dataloader_num_workers=0, past_index=-1, run_name='outputs/test', disable_tqdm=False, remove_unused_columns=True, label_names=None, load_best_model_at_end=False, metric_for_best_model=None, greater_is_better=None, label_smoothing=0.1, sortish_sampler=False, predict_with_generate=True, adafactor=False, encoder_layerdrop=None, decoder_layerdrop=None, dropout=None, attention_dropout=None, lr_scheduler='linear', fixed_length_emb=None, encoder_projection=None, encoder_pooling=None, projection_length=None, only_projection_bottleneck=False, concat_projection_token=False, gcs_bucket='ruse-xcloud-bucket', temperature=10, train_adapters=True, do_finetune=True, parametric_task_embedding=False, eval_output_dir='outputs/finetune-adapter/test-n-1-lr-1e-02-e-20')
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You should probably TRAIN this model on a down-stream task to be able to use it for predictions and inference.
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
12/12/2020 15:38:44 - INFO - filelock - Lock 140079090376272 acquired on /idiap/home/rkarimi/.cache/huggingface/datasets/4c7b1146606607c193d1ef601d8d0c134521b2ac59f61ee98c09119be925ee16.7ad892de9d7f1b4f9dfc598ef31e4a398a7224176bc9a3110e0e2075ff943e8f.py.lock
12/12/2020 15:38:44 - INFO - filelock - Lock 140079090376272 released on /idiap/home/rkarimi/.cache/huggingface/datasets/4c7b1146606607c193d1ef601d8d0c134521b2ac59f61ee98c09119be925ee16.7ad892de9d7f1b4f9dfc598ef31e4a398a7224176bc9a3110e0e2075ff943e8f.py.lock
Using custom data configuration default
12/12/2020 15:38:44 - INFO - filelock - Lock 140082549312272 acquired on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
12/12/2020 15:38:44 - INFO - filelock - Lock 140082549312272 released on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
12/12/2020 15:38:44 - INFO - filelock - Lock 140082549365648 acquired on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
Reusing dataset boolq (/idiap/temp/rkarimi/cache_home_1/datasets/boolq/default/0.1.0/1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534)
12/12/2020 15:38:44 - INFO - filelock - Lock 140082549365648 released on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
Loading cached processed dataset at /idiap/temp/rkarimi/cache_home_1/datasets/boolq/default/0.1.0/1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534/cache-6810ece2a440c3be.arrow
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
12/12/2020 15:38:45 - INFO - filelock - Lock 140082549560848 acquired on /idiap/home/rkarimi/.cache/huggingface/datasets/4c7b1146606607c193d1ef601d8d0c134521b2ac59f61ee98c09119be925ee16.7ad892de9d7f1b4f9dfc598ef31e4a398a7224176bc9a3110e0e2075ff943e8f.py.lock
12/12/2020 15:38:45 - INFO - filelock - Lock 140082549560848 released on /idiap/home/rkarimi/.cache/huggingface/datasets/4c7b1146606607c193d1ef601d8d0c134521b2ac59f61ee98c09119be925ee16.7ad892de9d7f1b4f9dfc598ef31e4a398a7224176bc9a3110e0e2075ff943e8f.py.lock
Using custom data configuration default
12/12/2020 15:38:45 - INFO - filelock - Lock 140082549560848 acquired on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
12/12/2020 15:38:45 - INFO - filelock - Lock 140082549560848 released on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
12/12/2020 15:38:45 - INFO - filelock - Lock 140082549365200 acquired on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
Reusing dataset boolq (/idiap/temp/rkarimi/cache_home_1/datasets/boolq/default/0.1.0/1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534)
12/12/2020 15:38:45 - INFO - filelock - Lock 140082549365200 released on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
Loading cached processed dataset at /idiap/temp/rkarimi/cache_home_1/datasets/boolq/default/0.1.0/1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534/cache-9a2822394a3a4e34.arrow
12/12/2020 15:38:45 - INFO - seq2seq.metrics.metrics - selected metric <function build_compute_metrics_fn.<locals>.classification_metrics at 0x7f66b464cc20> for task boolq
12/12/2020 15:38:45 - INFO - seq2seq.trainers.trainer - ***** Running training *****
12/12/2020 15:38:45 - INFO - seq2seq.trainers.trainer - Num examples = 10
12/12/2020 15:38:45 - INFO - seq2seq.trainers.trainer - Num Epochs = 2
12/12/2020 15:38:45 - INFO - seq2seq.trainers.trainer - Instantaneous batch size per device = 64
12/12/2020 15:38:45 - INFO - seq2seq.trainers.trainer - Total train batch size (w. parallel, distributed & accumulation) = 64
12/12/2020 15:38:45 - INFO - seq2seq.trainers.trainer - Gradient Accumulation steps = 1
12/12/2020 15:38:45 - INFO - seq2seq.trainers.trainer - Total optimization steps = 2
{'loss': 529.79443359375, 'learning_rate': 2e-05, 'epoch': 1.0}
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 2/2 [00:00<00:00, 2.37it/s]12/12/2020 15:38:46 - INFO - seq2seq.trainers.trainer -
Training completed. Do not forget to share your model on huggingface.co/models =)
{'epoch': 2.0}
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 2/2 [00:00<00:00, 2.43it/s]
12/12/2020 15:38:46 - INFO - seq2seq.trainers.trainer - Saving model checkpoint to outputs/test
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
12/12/2020 15:38:59 - INFO - filelock - Lock 140079084929680 acquired on /idiap/home/rkarimi/.cache/huggingface/datasets/4c7b1146606607c193d1ef601d8d0c134521b2ac59f61ee98c09119be925ee16.7ad892de9d7f1b4f9dfc598ef31e4a398a7224176bc9a3110e0e2075ff943e8f.py.lock
12/12/2020 15:38:59 - INFO - filelock - Lock 140079084929680 released on /idiap/home/rkarimi/.cache/huggingface/datasets/4c7b1146606607c193d1ef601d8d0c134521b2ac59f61ee98c09119be925ee16.7ad892de9d7f1b4f9dfc598ef31e4a398a7224176bc9a3110e0e2075ff943e8f.py.lock
Using custom data configuration default
12/12/2020 15:38:59 - INFO - filelock - Lock 140079084929360 acquired on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
12/12/2020 15:38:59 - INFO - filelock - Lock 140079084929360 released on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
12/12/2020 15:38:59 - INFO - filelock - Lock 140079085355216 acquired on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
Reusing dataset boolq (/idiap/temp/rkarimi/cache_home_1/datasets/boolq/default/0.1.0/1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534)
12/12/2020 15:38:59 - INFO - filelock - Lock 140079085355216 released on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
Loading cached processed dataset at /idiap/temp/rkarimi/cache_home_1/datasets/boolq/default/0.1.0/1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534/cache-164dd1d57e9fa69a.arrow
12/12/2020 15:38:59 - INFO - seq2seq.metrics.metrics - selected metric <function build_compute_metrics_fn.<locals>.classification_metrics at 0x7f66b40c67a0> for task boolq
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - ***** Running training *****
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Num examples = 1
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Num Epochs = 2
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Instantaneous batch size per device = 64
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Total train batch size (w. parallel, distributed & accumulation) = 64
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Gradient Accumulation steps = 1
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Total optimization steps = 2
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Continuing training from checkpoint, will skip to saved global_step
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Continuing training from epoch 2
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Continuing training from global step 2
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Will skip the first 0 steps in the first epoch
0%| | 0/2 [00:00<?, ?it/s]12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer -
Training completed. Do not forget to share your model on huggingface.co/models =)
{'epoch': 2.0}
0%| | 0/2 [00:00<?, ?it/s]
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Saving model checkpoint to outputs/finetune-adapter/test-n-1-lr-1e-02-e-20/boolq
12/12/2020 15:39:07 - INFO - seq2seq.utils.utils - using task specific params for boolq: {'max_length': 3}
12/12/2020 15:39:07 - INFO - seq2seq.trainers.trainer - ***** Running Evaluation *****
12/12/2020 15:39:07 - INFO - seq2seq.trainers.trainer - Num examples = 3269
12/12/2020 15:39:07 - INFO - seq2seq.trainers.trainer - Batch size = 64
100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 52/52 [00:12<00:00, 4.86it/s][libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0):
terminate called after throwing an instance of 'google::protobuf::FatalException'
what(): CHECK failed: (index) >= (0):
Aborted
```
| Hi
I am getting this error when evaluating on wmt16-ro-en using finetune_trainer.py of huggingface repo. thank for your help
{'epoch': 20.0}
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 20/20 [00:16<00:00, 1.22it/s]
12/08/2020 10:41:19 - INFO - seq2seq.trainers.trainer - Saving model checkpoint to outputs/experiment/joint/finetune/lr-2e-5
12/08/2020 10:41:24 - INFO - __main__ - {'wmt16-en-ro': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 1998), 'qnli': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 5462), 'scitail': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 1303)}
12/08/2020 10:41:24 - INFO - __main__ - *** Evaluate ***
12/08/2020 10:41:24 - INFO - seq2seq.utils.utils - using task specific params for wmt16-en-ro: {'max_length': 300, 'num_beams': 4}
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - ***** Running Evaluation *****
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - Num examples = 1998
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - Batch size = 64
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 32/32 [00:37<00:00, 1.19s/it][libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0):
terminate called after throwing an instance of 'google::protobuf::FatalException'
what(): CHECK failed: (index) >= (0):
Aborted
| 1,524 | [libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0): terminate called after throwing an instance of 'google::protobuf::FatalException' what(): CHECK failed: (index) >= (0): Aborted
Hi
I am getting this error when evaluating on wmt16-ro-en using finetune_trainer.py of huggingface repo. thank for your help
{'epoch': 20.0}
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 20/20 [00:16<00:00, 1.22it/s]
12/08/2020 10:41:19 - INFO - seq2seq.trainers.trainer - Saving model checkpoint to outputs/experiment/joint/finetune/lr-2e-5
12/08/2020 10:41:24 - INFO - __main__ - {'wmt16-en-ro': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 1998), 'qnli': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 5462), 'scitail': Dataset(features: {'src_texts': Value(dtype='string', id=None), 'task': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 1303)}
12/08/2020 10:41:24 - INFO - __main__ - *** Evaluate ***
12/08/2020 10:41:24 - INFO - seq2seq.utils.utils - using task specific params for wmt16-en-ro: {'max_length': 300, 'num_beams': 4}
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - ***** Running Evaluation *****
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - Num examples = 1998
12/08/2020 10:41:24 - INFO - seq2seq.trainers.trainer - Batch size = 64
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 32/32 [00:37<00:00, 1.19s/it][libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0):
terminate called after throwing an instance of 'google::protobuf::FatalException'
what(): CHECK failed: (index) >= (0):
Aborted
Hi @lhoestq
I am not really sure which part is causing this, to me this is more related to dataset library as this is happening for some of the datassets below please find the information to reprodcue the bug, this is really blocking me and I appreciate your help
## Environment info
- `transformers` version: 3.5.1
- Platform: GPU
- Python version: 3.7
- PyTorch version (GPU?): 1.0.4
- Tensorflow version (GPU?): -
- Using GPU in script?: -
- Using distributed or parallel set-up in script?: -
### Who can help
tokenizers: @mfuntowicz
Trainer: @sgugger
TextGeneration: @TevenLeScao
nlp datasets: [different repo](https://github.com/huggingface/nlp)
rust tokenizers: [different repo](https://github.com/huggingface/tokenizers)
examples/seq2seq: @patil-suraj
## Information
Hi
I am testing seq2seq model with T5 on different datasets and this is always getting the following bug, this is really blocking me as this fails for many datasets. could you have a look please? thanks
```
[libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0):
terminate called after throwing an instance of 'google::protobuf::FatalException'
what(): CHECK failed: (index) >= (0):
Aborted
```
To reproduce the error please run on 1 GPU:
```
git clone [email protected]:rabeehk/debug-seq2seq.git
python setup.py develop
cd seq2seq
python finetune_t5_trainer.py temp.json
```
Full output of the program:
```
(internship) rkarimi@vgnh008:/idiap/user/rkarimi/dev/debug-seq2seq/seq2seq$ python finetune_t5_trainer.py temp.json
2020-12-12 15:38:16.234542: W tensorflow/stream_executor/platform/default/dso_loader.cc:60] Could not load dynamic library 'libcudart.so.11.0'; dlerror: libcudart.so.11.0: cannot open shared object file: No such file or directory
2020-12-12 15:38:16.234598: I tensorflow/stream_executor/cuda/cudart_stub.cc:29] Ignore above cudart dlerror if you do not have a GPU set up on your machine.
12/12/2020 15:38:32 - WARNING - __main__ - Process rank: -1, device: cuda:0, n_gpu: 1, distributed training: False, 16-bits training: False
12/12/2020 15:38:32 - INFO - __main__ - Training/evaluation parameters Seq2SeqTrainingArguments(output_dir='outputs/test', overwrite_output_dir=True, do_train=True, do_eval=True, do_predict=False, evaluate_during_training=False, evaluation_strategy=<EvaluationStrategy.NO: 'no'>, prediction_loss_only=False, per_device_train_batch_size=64, per_device_eval_batch_size=64, per_gpu_train_batch_size=None, per_gpu_eval_batch_size=None, gradient_accumulation_steps=1, eval_accumulation_steps=None, learning_rate=0.01, weight_decay=0.0, adam_beta1=0.9, adam_beta2=0.999, adam_epsilon=1e-08, max_grad_norm=1.0, num_train_epochs=2, max_steps=-1, warmup_steps=500, logging_dir='runs/Dec12_15-38-32_vgnh008', logging_first_step=True, logging_steps=200, save_steps=200, save_total_limit=1, no_cuda=False, seed=42, fp16=False, fp16_opt_level='O1', local_rank=-1, tpu_num_cores=None, tpu_metrics_debug=False, debug=False, dataloader_drop_last=False, eval_steps=200, dataloader_num_workers=0, past_index=-1, run_name='outputs/test', disable_tqdm=False, remove_unused_columns=True, label_names=None, load_best_model_at_end=False, metric_for_best_model=None, greater_is_better=None, label_smoothing=0.1, sortish_sampler=False, predict_with_generate=True, adafactor=False, encoder_layerdrop=None, decoder_layerdrop=None, dropout=None, attention_dropout=None, lr_scheduler='linear', fixed_length_emb=None, encoder_projection=None, encoder_pooling=None, projection_length=None, only_projection_bottleneck=False, concat_projection_token=False, gcs_bucket='ruse-xcloud-bucket', temperature=10, train_adapters=True, do_finetune=True, parametric_task_embedding=False, eval_output_dir='outputs/finetune-adapter/test-n-1-lr-1e-02-e-20')
Some weights of T5ForConditionalGeneration were not initialized from the model checkpoint at t5-small and are newly initialized: ['encoder.block.0.layer.0.adapter_controller.meta_up_sampler.weight_generator.0.weight', 'encoder.block.0.layer.0.adapter_controller.meta_up_sampler.weight_generator.0.bias', 'encoder.block.0.layer.0.adapter_controller.meta_up_sampler.weight_generator.1.weight', 'encoder.block.0.layer.0.adapter_controller.meta_up_sampler.weight_generator.1.bias', 'encoder.block.0.layer.0.adapter_controller.meta_up_sampler.bias_generator.0.weight', 'encoder.block.0.layer.0.adapter_controller.meta_up_sampler.bias_generator.0.bias', 'encoder.block.0.layer.0.adapter_controller.meta_up_sampler.bias_generator.1.weight', 'encoder.block.0.layer.0.adapter_controller.meta_up_sampler.bias_generator.1.bias', 'encoder.block.0.layer.0.adapter_controller.meta_down_sampler.weight_generator.0.weight', 'encoder.block.0.layer.0.adapter_controller.meta_down_sampler.weight_generator.0.bias', 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'encoder.block.0.layer.1.adapter_controller.meta_down_sampler.bias_generator.1.weight', 'encoder.block.0.layer.1.adapter_controller.meta_down_sampler.bias_generator.1.bias', 'encoder.block.0.layer.1.adapter_controller.post_layer_norm.weight', 'encoder.block.0.layer.1.adapter_controller.post_layer_norm.bias', 'encoder.block.1.layer.0.adapter_controller.meta_up_sampler.weight_generator.0.weight', 'encoder.block.1.layer.0.adapter_controller.meta_up_sampler.weight_generator.0.bias', 'encoder.block.1.layer.0.adapter_controller.meta_up_sampler.weight_generator.1.weight', 'encoder.block.1.layer.0.adapter_controller.meta_up_sampler.weight_generator.1.bias', 'encoder.block.1.layer.0.adapter_controller.meta_up_sampler.bias_generator.0.weight', 'encoder.block.1.layer.0.adapter_controller.meta_up_sampler.bias_generator.0.bias', 'encoder.block.1.layer.0.adapter_controller.meta_up_sampler.bias_generator.1.weight', 'encoder.block.1.layer.0.adapter_controller.meta_up_sampler.bias_generator.1.bias', 'encoder.block.1.layer.0.adapter_controller.meta_down_sampler.weight_generator.0.weight', 'encoder.block.1.layer.0.adapter_controller.meta_down_sampler.weight_generator.0.bias', 'encoder.block.1.layer.0.adapter_controller.meta_down_sampler.weight_generator.1.weight', 'encoder.block.1.layer.0.adapter_controller.meta_down_sampler.weight_generator.1.bias', 'encoder.block.1.layer.0.adapter_controller.meta_down_sampler.bias_generator.0.weight', 'encoder.block.1.layer.0.adapter_controller.meta_down_sampler.bias_generator.0.bias', 'encoder.block.1.layer.0.adapter_controller.meta_down_sampler.bias_generator.1.weight', 'encoder.block.1.layer.0.adapter_controller.meta_down_sampler.bias_generator.1.bias', 'encoder.block.1.layer.0.adapter_controller.post_layer_norm.weight', 'encoder.block.1.layer.0.adapter_controller.post_layer_norm.bias', 'encoder.block.1.layer.1.adapter_controller.meta_up_sampler.weight_generator.0.weight', 'encoder.block.1.layer.1.adapter_controller.meta_up_sampler.weight_generator.0.bias', 'encoder.block.1.layer.1.adapter_controller.meta_up_sampler.weight_generator.1.weight', 'encoder.block.1.layer.1.adapter_controller.meta_up_sampler.weight_generator.1.bias', 'encoder.block.1.layer.1.adapter_controller.meta_up_sampler.bias_generator.0.weight', 'encoder.block.1.layer.1.adapter_controller.meta_up_sampler.bias_generator.0.bias', 'encoder.block.1.layer.1.adapter_controller.meta_up_sampler.bias_generator.1.weight', 'encoder.block.1.layer.1.adapter_controller.meta_up_sampler.bias_generator.1.bias', 'encoder.block.1.layer.1.adapter_controller.meta_down_sampler.weight_generator.0.weight', 'encoder.block.1.layer.1.adapter_controller.meta_down_sampler.weight_generator.0.bias', 'encoder.block.1.layer.1.adapter_controller.meta_down_sampler.weight_generator.1.weight', 'encoder.block.1.layer.1.adapter_controller.meta_down_sampler.weight_generator.1.bias', 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'decoder.block.3.layer.0.adapter_controller.meta_down_sampler.weight_generator.1.bias', 'decoder.block.3.layer.0.adapter_controller.meta_down_sampler.bias_generator.0.weight', 'decoder.block.3.layer.0.adapter_controller.meta_down_sampler.bias_generator.0.bias', 'decoder.block.3.layer.0.adapter_controller.meta_down_sampler.bias_generator.1.weight', 'decoder.block.3.layer.0.adapter_controller.meta_down_sampler.bias_generator.1.bias', 'decoder.block.3.layer.0.adapter_controller.post_layer_norm.weight', 'decoder.block.3.layer.0.adapter_controller.post_layer_norm.bias', 'decoder.block.3.layer.2.adapter_controller.meta_up_sampler.weight_generator.0.weight', 'decoder.block.3.layer.2.adapter_controller.meta_up_sampler.weight_generator.0.bias', 'decoder.block.3.layer.2.adapter_controller.meta_up_sampler.weight_generator.1.weight', 'decoder.block.3.layer.2.adapter_controller.meta_up_sampler.weight_generator.1.bias', 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'decoder.block.3.layer.2.adapter_controller.meta_down_sampler.bias_generator.1.bias', 'decoder.block.3.layer.2.adapter_controller.post_layer_norm.weight', 'decoder.block.3.layer.2.adapter_controller.post_layer_norm.bias', 'decoder.block.4.layer.0.adapter_controller.meta_up_sampler.weight_generator.0.weight', 'decoder.block.4.layer.0.adapter_controller.meta_up_sampler.weight_generator.0.bias', 'decoder.block.4.layer.0.adapter_controller.meta_up_sampler.weight_generator.1.weight', 'decoder.block.4.layer.0.adapter_controller.meta_up_sampler.weight_generator.1.bias', 'decoder.block.4.layer.0.adapter_controller.meta_up_sampler.bias_generator.0.weight', 'decoder.block.4.layer.0.adapter_controller.meta_up_sampler.bias_generator.0.bias', 'decoder.block.4.layer.0.adapter_controller.meta_up_sampler.bias_generator.1.weight', 'decoder.block.4.layer.0.adapter_controller.meta_up_sampler.bias_generator.1.bias', 'decoder.block.4.layer.0.adapter_controller.meta_down_sampler.weight_generator.0.weight', 'decoder.block.4.layer.0.adapter_controller.meta_down_sampler.weight_generator.0.bias', 'decoder.block.4.layer.0.adapter_controller.meta_down_sampler.weight_generator.1.weight', 'decoder.block.4.layer.0.adapter_controller.meta_down_sampler.weight_generator.1.bias', 'decoder.block.4.layer.0.adapter_controller.meta_down_sampler.bias_generator.0.weight', 'decoder.block.4.layer.0.adapter_controller.meta_down_sampler.bias_generator.0.bias', 'decoder.block.4.layer.0.adapter_controller.meta_down_sampler.bias_generator.1.weight', 'decoder.block.4.layer.0.adapter_controller.meta_down_sampler.bias_generator.1.bias', 'decoder.block.4.layer.0.adapter_controller.post_layer_norm.weight', 'decoder.block.4.layer.0.adapter_controller.post_layer_norm.bias', 'decoder.block.4.layer.2.adapter_controller.meta_up_sampler.weight_generator.0.weight', 'decoder.block.4.layer.2.adapter_controller.meta_up_sampler.weight_generator.0.bias', 'decoder.block.4.layer.2.adapter_controller.meta_up_sampler.weight_generator.1.weight', 'decoder.block.4.layer.2.adapter_controller.meta_up_sampler.weight_generator.1.bias', 'decoder.block.4.layer.2.adapter_controller.meta_up_sampler.bias_generator.0.weight', 'decoder.block.4.layer.2.adapter_controller.meta_up_sampler.bias_generator.0.bias', 'decoder.block.4.layer.2.adapter_controller.meta_up_sampler.bias_generator.1.weight', 'decoder.block.4.layer.2.adapter_controller.meta_up_sampler.bias_generator.1.bias', 'decoder.block.4.layer.2.adapter_controller.meta_down_sampler.weight_generator.0.weight', 'decoder.block.4.layer.2.adapter_controller.meta_down_sampler.weight_generator.0.bias', 'decoder.block.4.layer.2.adapter_controller.meta_down_sampler.weight_generator.1.weight', 'decoder.block.4.layer.2.adapter_controller.meta_down_sampler.weight_generator.1.bias', 'decoder.block.4.layer.2.adapter_controller.meta_down_sampler.bias_generator.0.weight', 'decoder.block.4.layer.2.adapter_controller.meta_down_sampler.bias_generator.0.bias', 'decoder.block.4.layer.2.adapter_controller.meta_down_sampler.bias_generator.1.weight', 'decoder.block.4.layer.2.adapter_controller.meta_down_sampler.bias_generator.1.bias', 'decoder.block.4.layer.2.adapter_controller.post_layer_norm.weight', 'decoder.block.4.layer.2.adapter_controller.post_layer_norm.bias', 'decoder.block.5.layer.0.adapter_controller.meta_up_sampler.weight_generator.0.weight', 'decoder.block.5.layer.0.adapter_controller.meta_up_sampler.weight_generator.0.bias', 'decoder.block.5.layer.0.adapter_controller.meta_up_sampler.weight_generator.1.weight', 'decoder.block.5.layer.0.adapter_controller.meta_up_sampler.weight_generator.1.bias', 'decoder.block.5.layer.0.adapter_controller.meta_up_sampler.bias_generator.0.weight', 'decoder.block.5.layer.0.adapter_controller.meta_up_sampler.bias_generator.0.bias', 'decoder.block.5.layer.0.adapter_controller.meta_up_sampler.bias_generator.1.weight', 'decoder.block.5.layer.0.adapter_controller.meta_up_sampler.bias_generator.1.bias', 'decoder.block.5.layer.0.adapter_controller.meta_down_sampler.weight_generator.0.weight', 'decoder.block.5.layer.0.adapter_controller.meta_down_sampler.weight_generator.0.bias', 'decoder.block.5.layer.0.adapter_controller.meta_down_sampler.weight_generator.1.weight', 'decoder.block.5.layer.0.adapter_controller.meta_down_sampler.weight_generator.1.bias', 'decoder.block.5.layer.0.adapter_controller.meta_down_sampler.bias_generator.0.weight', 'decoder.block.5.layer.0.adapter_controller.meta_down_sampler.bias_generator.0.bias', 'decoder.block.5.layer.0.adapter_controller.meta_down_sampler.bias_generator.1.weight', 'decoder.block.5.layer.0.adapter_controller.meta_down_sampler.bias_generator.1.bias', 'decoder.block.5.layer.0.adapter_controller.post_layer_norm.weight', 'decoder.block.5.layer.0.adapter_controller.post_layer_norm.bias', 'decoder.block.5.layer.2.adapter_controller.meta_up_sampler.weight_generator.0.weight', 'decoder.block.5.layer.2.adapter_controller.meta_up_sampler.weight_generator.0.bias', 'decoder.block.5.layer.2.adapter_controller.meta_up_sampler.weight_generator.1.weight', 'decoder.block.5.layer.2.adapter_controller.meta_up_sampler.weight_generator.1.bias', 'decoder.block.5.layer.2.adapter_controller.meta_up_sampler.bias_generator.0.weight', 'decoder.block.5.layer.2.adapter_controller.meta_up_sampler.bias_generator.0.bias', 'decoder.block.5.layer.2.adapter_controller.meta_up_sampler.bias_generator.1.weight', 'decoder.block.5.layer.2.adapter_controller.meta_up_sampler.bias_generator.1.bias', 'decoder.block.5.layer.2.adapter_controller.meta_down_sampler.weight_generator.0.weight', 'decoder.block.5.layer.2.adapter_controller.meta_down_sampler.weight_generator.0.bias', 'decoder.block.5.layer.2.adapter_controller.meta_down_sampler.weight_generator.1.weight', 'decoder.block.5.layer.2.adapter_controller.meta_down_sampler.weight_generator.1.bias', 'decoder.block.5.layer.2.adapter_controller.meta_down_sampler.bias_generator.0.weight', 'decoder.block.5.layer.2.adapter_controller.meta_down_sampler.bias_generator.0.bias', 'decoder.block.5.layer.2.adapter_controller.meta_down_sampler.bias_generator.1.weight', 'decoder.block.5.layer.2.adapter_controller.meta_down_sampler.bias_generator.1.bias', 'decoder.block.5.layer.2.adapter_controller.post_layer_norm.weight', 'decoder.block.5.layer.2.adapter_controller.post_layer_norm.bias']
You should probably TRAIN this model on a down-stream task to be able to use it for predictions and inference.
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
12/12/2020 15:38:44 - INFO - filelock - Lock 140079090376272 acquired on /idiap/home/rkarimi/.cache/huggingface/datasets/4c7b1146606607c193d1ef601d8d0c134521b2ac59f61ee98c09119be925ee16.7ad892de9d7f1b4f9dfc598ef31e4a398a7224176bc9a3110e0e2075ff943e8f.py.lock
12/12/2020 15:38:44 - INFO - filelock - Lock 140079090376272 released on /idiap/home/rkarimi/.cache/huggingface/datasets/4c7b1146606607c193d1ef601d8d0c134521b2ac59f61ee98c09119be925ee16.7ad892de9d7f1b4f9dfc598ef31e4a398a7224176bc9a3110e0e2075ff943e8f.py.lock
Using custom data configuration default
12/12/2020 15:38:44 - INFO - filelock - Lock 140082549312272 acquired on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
12/12/2020 15:38:44 - INFO - filelock - Lock 140082549312272 released on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
12/12/2020 15:38:44 - INFO - filelock - Lock 140082549365648 acquired on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
Reusing dataset boolq (/idiap/temp/rkarimi/cache_home_1/datasets/boolq/default/0.1.0/1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534)
12/12/2020 15:38:44 - INFO - filelock - Lock 140082549365648 released on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
Loading cached processed dataset at /idiap/temp/rkarimi/cache_home_1/datasets/boolq/default/0.1.0/1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534/cache-6810ece2a440c3be.arrow
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
12/12/2020 15:38:45 - INFO - filelock - Lock 140082549560848 acquired on /idiap/home/rkarimi/.cache/huggingface/datasets/4c7b1146606607c193d1ef601d8d0c134521b2ac59f61ee98c09119be925ee16.7ad892de9d7f1b4f9dfc598ef31e4a398a7224176bc9a3110e0e2075ff943e8f.py.lock
12/12/2020 15:38:45 - INFO - filelock - Lock 140082549560848 released on /idiap/home/rkarimi/.cache/huggingface/datasets/4c7b1146606607c193d1ef601d8d0c134521b2ac59f61ee98c09119be925ee16.7ad892de9d7f1b4f9dfc598ef31e4a398a7224176bc9a3110e0e2075ff943e8f.py.lock
Using custom data configuration default
12/12/2020 15:38:45 - INFO - filelock - Lock 140082549560848 acquired on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
12/12/2020 15:38:45 - INFO - filelock - Lock 140082549560848 released on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
12/12/2020 15:38:45 - INFO - filelock - Lock 140082549365200 acquired on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
Reusing dataset boolq (/idiap/temp/rkarimi/cache_home_1/datasets/boolq/default/0.1.0/1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534)
12/12/2020 15:38:45 - INFO - filelock - Lock 140082549365200 released on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
Loading cached processed dataset at /idiap/temp/rkarimi/cache_home_1/datasets/boolq/default/0.1.0/1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534/cache-9a2822394a3a4e34.arrow
12/12/2020 15:38:45 - INFO - seq2seq.metrics.metrics - selected metric <function build_compute_metrics_fn.<locals>.classification_metrics at 0x7f66b464cc20> for task boolq
12/12/2020 15:38:45 - INFO - seq2seq.trainers.trainer - ***** Running training *****
12/12/2020 15:38:45 - INFO - seq2seq.trainers.trainer - Num examples = 10
12/12/2020 15:38:45 - INFO - seq2seq.trainers.trainer - Num Epochs = 2
12/12/2020 15:38:45 - INFO - seq2seq.trainers.trainer - Instantaneous batch size per device = 64
12/12/2020 15:38:45 - INFO - seq2seq.trainers.trainer - Total train batch size (w. parallel, distributed & accumulation) = 64
12/12/2020 15:38:45 - INFO - seq2seq.trainers.trainer - Gradient Accumulation steps = 1
12/12/2020 15:38:45 - INFO - seq2seq.trainers.trainer - Total optimization steps = 2
{'loss': 529.79443359375, 'learning_rate': 2e-05, 'epoch': 1.0}
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 2/2 [00:00<00:00, 2.37it/s]12/12/2020 15:38:46 - INFO - seq2seq.trainers.trainer -
Training completed. Do not forget to share your model on huggingface.co/models =)
{'epoch': 2.0}
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 2/2 [00:00<00:00, 2.43it/s]
12/12/2020 15:38:46 - INFO - seq2seq.trainers.trainer - Saving model checkpoint to outputs/test
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
12/12/2020 15:38:59 - INFO - filelock - Lock 140079084929680 acquired on /idiap/home/rkarimi/.cache/huggingface/datasets/4c7b1146606607c193d1ef601d8d0c134521b2ac59f61ee98c09119be925ee16.7ad892de9d7f1b4f9dfc598ef31e4a398a7224176bc9a3110e0e2075ff943e8f.py.lock
12/12/2020 15:38:59 - INFO - filelock - Lock 140079084929680 released on /idiap/home/rkarimi/.cache/huggingface/datasets/4c7b1146606607c193d1ef601d8d0c134521b2ac59f61ee98c09119be925ee16.7ad892de9d7f1b4f9dfc598ef31e4a398a7224176bc9a3110e0e2075ff943e8f.py.lock
Using custom data configuration default
12/12/2020 15:38:59 - INFO - filelock - Lock 140079084929360 acquired on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
12/12/2020 15:38:59 - INFO - filelock - Lock 140079084929360 released on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
12/12/2020 15:38:59 - INFO - filelock - Lock 140079085355216 acquired on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
Reusing dataset boolq (/idiap/temp/rkarimi/cache_home_1/datasets/boolq/default/0.1.0/1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534)
12/12/2020 15:38:59 - INFO - filelock - Lock 140079085355216 released on /idiap/temp/rkarimi/cache_home_1/datasets/_idiap_temp_rkarimi_cache_home_1_datasets_boolq_default_0.1.0_1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534.lock
Loading cached processed dataset at /idiap/temp/rkarimi/cache_home_1/datasets/boolq/default/0.1.0/1fcfdc6f36dc89a2245ffbbd5248ab33890594b50396731ebc78411bdd2ca534/cache-164dd1d57e9fa69a.arrow
12/12/2020 15:38:59 - INFO - seq2seq.metrics.metrics - selected metric <function build_compute_metrics_fn.<locals>.classification_metrics at 0x7f66b40c67a0> for task boolq
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - ***** Running training *****
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Num examples = 1
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Num Epochs = 2
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Instantaneous batch size per device = 64
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Total train batch size (w. parallel, distributed & accumulation) = 64
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Gradient Accumulation steps = 1
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Total optimization steps = 2
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Continuing training from checkpoint, will skip to saved global_step
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Continuing training from epoch 2
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Continuing training from global step 2
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Will skip the first 0 steps in the first epoch
0%| | 0/2 [00:00<?, ?it/s]12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer -
Training completed. Do not forget to share your model on huggingface.co/models =)
{'epoch': 2.0}
0%| | 0/2 [00:00<?, ?it/s]
12/12/2020 15:38:59 - INFO - seq2seq.trainers.trainer - Saving model checkpoint to outputs/finetune-adapter/test-n-1-lr-1e-02-e-20/boolq
12/12/2020 15:39:07 - INFO - seq2seq.utils.utils - using task specific params for boolq: {'max_length': 3}
12/12/2020 15:39:07 - INFO - seq2seq.trainers.trainer - ***** Running Evaluation *****
12/12/2020 15:39:07 - INFO - seq2seq.trainers.trainer - Num examples = 3269
12/12/2020 15:39:07 - INFO - seq2seq.trainers.trainer - Batch size = 64
100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 52/52 [00:12<00:00, 4.86it/s][libprotobuf FATAL /sentencepiece/src/../third_party/protobuf-lite/google/protobuf/repeated_field.h:1505] CHECK failed: (index) >= (0):
terminate called after throwing an instance of 'google::protobuf::FatalException'
what(): CHECK failed: (index) >= (0):
Aborted
```
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0.0039324821,
0.349367857,
0.4842422307,
0.0076736747,
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0.1216882989,
-0.2513459325,
0.3279395998,
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0.3986017108,
0.0242617242,
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0.0782152489,
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0.1850418895,
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0.2666341066,
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0.2954922318,
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0.0884473473,
0.1073487177,
0.0845447555,
-0.0165825766,
-0.3517344296,
0.0590411983,
-0.0919297561,
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] |
https://github.com/huggingface/datasets/issues/1285 | boolq does not work | here is the minimal code to reproduce
`datasets>>> datasets.load_dataset("boolq", "train")
the errors
```
`cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
Using custom data configuration train
Downloading and preparing dataset boolq/train (download: Unknown size, generated: Unknown size, post-processed: Unknown size, total: Unknown size) to /idiap/temp/rkarimi/cache_home_1/datasets/boolq/train/0.1.0/2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11...
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets/downloads
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 531, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File " /idiap/home/rkarimi/.cache/huggingface/modules/datasets_modules/datasets/boolq/2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11/boolq.py", line 74, in _split_generators
downloaded_files = dl_manager.download_custom(urls_to_download, tf.io.gfile.copy)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/download_manager.py", line 149, in download_custom
custom_download(url, path)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/tensorflow/python/lib/io/file_io.py", line 516, in copy_v2
compat.path_to_bytes(src), compat.path_to_bytes(dst), overwrite)
``` | Hi
I am getting this error when trying to load boolq, thanks for your help
ts_boolq_default_0.1.0_2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11.lock
Traceback (most recent call last):
File "finetune_t5_trainer.py", line 274, in <module>
main()
File "finetune_t5_trainer.py", line 147, in main
for task in data_args.tasks]
File "finetune_t5_trainer.py", line 147, in <listcomp>
for task in data_args.tasks]
File "/remote/idiap.svm/user.active/rkarimi/dev/ruse/seq2seq/tasks/tasks.py", line 58, in get_dataset
dataset = self.load_dataset(split=split)
File "/remote/idiap.svm/user.active/rkarimi/dev/ruse/seq2seq/tasks/tasks.py", line 54, in load_dataset
return datasets.load_dataset(self.task.name, split=split)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 531, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File " /idiap/home/rkarimi/.cache/huggingface/modules/datasets_modules/datasets/boolq/2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11/boolq.py", line 74, in _split_generators
downloaded_files = dl_manager.download_custom(urls_to_download, tf.io.gfile.copy)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/download_manager.py", line 149, in download_custom
custom_download(url, path)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/tensorflow/python/lib/io/file_io.py", line 516, in copy_v2
compat.path_to_bytes(src), compat.path_to_bytes(dst), overwrite)
tensorflow.python.framework.errors_impl.AlreadyExistsError: file already exists
| 115 | boolq does not work
Hi
I am getting this error when trying to load boolq, thanks for your help
ts_boolq_default_0.1.0_2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11.lock
Traceback (most recent call last):
File "finetune_t5_trainer.py", line 274, in <module>
main()
File "finetune_t5_trainer.py", line 147, in main
for task in data_args.tasks]
File "finetune_t5_trainer.py", line 147, in <listcomp>
for task in data_args.tasks]
File "/remote/idiap.svm/user.active/rkarimi/dev/ruse/seq2seq/tasks/tasks.py", line 58, in get_dataset
dataset = self.load_dataset(split=split)
File "/remote/idiap.svm/user.active/rkarimi/dev/ruse/seq2seq/tasks/tasks.py", line 54, in load_dataset
return datasets.load_dataset(self.task.name, split=split)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 531, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File " /idiap/home/rkarimi/.cache/huggingface/modules/datasets_modules/datasets/boolq/2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11/boolq.py", line 74, in _split_generators
downloaded_files = dl_manager.download_custom(urls_to_download, tf.io.gfile.copy)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/download_manager.py", line 149, in download_custom
custom_download(url, path)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/tensorflow/python/lib/io/file_io.py", line 516, in copy_v2
compat.path_to_bytes(src), compat.path_to_bytes(dst), overwrite)
tensorflow.python.framework.errors_impl.AlreadyExistsError: file already exists
here is the minimal code to reproduce
`datasets>>> datasets.load_dataset("boolq", "train")
the errors
```
`cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
Using custom data configuration train
Downloading and preparing dataset boolq/train (download: Unknown size, generated: Unknown size, post-processed: Unknown size, total: Unknown size) to /idiap/temp/rkarimi/cache_home_1/datasets/boolq/train/0.1.0/2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11...
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets
cahce dir /idiap/temp/rkarimi/cache_home_1/datasets/downloads
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 531, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File " /idiap/home/rkarimi/.cache/huggingface/modules/datasets_modules/datasets/boolq/2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11/boolq.py", line 74, in _split_generators
downloaded_files = dl_manager.download_custom(urls_to_download, tf.io.gfile.copy)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/download_manager.py", line 149, in download_custom
custom_download(url, path)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/tensorflow/python/lib/io/file_io.py", line 516, in copy_v2
compat.path_to_bytes(src), compat.path_to_bytes(dst), overwrite)
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https://github.com/huggingface/datasets/issues/1285 | boolq does not work | This has been fixed by #881
this fix will be available in the next release soon.
If you don't want to wait for the release you can actually load the latest version of boolq by specifying `script_version="master"` in `load_dataset` | Hi
I am getting this error when trying to load boolq, thanks for your help
ts_boolq_default_0.1.0_2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11.lock
Traceback (most recent call last):
File "finetune_t5_trainer.py", line 274, in <module>
main()
File "finetune_t5_trainer.py", line 147, in main
for task in data_args.tasks]
File "finetune_t5_trainer.py", line 147, in <listcomp>
for task in data_args.tasks]
File "/remote/idiap.svm/user.active/rkarimi/dev/ruse/seq2seq/tasks/tasks.py", line 58, in get_dataset
dataset = self.load_dataset(split=split)
File "/remote/idiap.svm/user.active/rkarimi/dev/ruse/seq2seq/tasks/tasks.py", line 54, in load_dataset
return datasets.load_dataset(self.task.name, split=split)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 531, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File " /idiap/home/rkarimi/.cache/huggingface/modules/datasets_modules/datasets/boolq/2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11/boolq.py", line 74, in _split_generators
downloaded_files = dl_manager.download_custom(urls_to_download, tf.io.gfile.copy)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/download_manager.py", line 149, in download_custom
custom_download(url, path)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/tensorflow/python/lib/io/file_io.py", line 516, in copy_v2
compat.path_to_bytes(src), compat.path_to_bytes(dst), overwrite)
tensorflow.python.framework.errors_impl.AlreadyExistsError: file already exists
| 39 | boolq does not work
Hi
I am getting this error when trying to load boolq, thanks for your help
ts_boolq_default_0.1.0_2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11.lock
Traceback (most recent call last):
File "finetune_t5_trainer.py", line 274, in <module>
main()
File "finetune_t5_trainer.py", line 147, in main
for task in data_args.tasks]
File "finetune_t5_trainer.py", line 147, in <listcomp>
for task in data_args.tasks]
File "/remote/idiap.svm/user.active/rkarimi/dev/ruse/seq2seq/tasks/tasks.py", line 58, in get_dataset
dataset = self.load_dataset(split=split)
File "/remote/idiap.svm/user.active/rkarimi/dev/ruse/seq2seq/tasks/tasks.py", line 54, in load_dataset
return datasets.load_dataset(self.task.name, split=split)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 531, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File " /idiap/home/rkarimi/.cache/huggingface/modules/datasets_modules/datasets/boolq/2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11/boolq.py", line 74, in _split_generators
downloaded_files = dl_manager.download_custom(urls_to_download, tf.io.gfile.copy)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/download_manager.py", line 149, in download_custom
custom_download(url, path)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/tensorflow/python/lib/io/file_io.py", line 516, in copy_v2
compat.path_to_bytes(src), compat.path_to_bytes(dst), overwrite)
tensorflow.python.framework.errors_impl.AlreadyExistsError: file already exists
This has been fixed by #881
this fix will be available in the next release soon.
If you don't want to wait for the release you can actually load the latest version of boolq by specifying `script_version="master"` in `load_dataset` | [
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] |
https://github.com/huggingface/datasets/issues/1167 | ❓ On-the-fly tokenization with datasets, tokenizers, and torch Datasets and Dataloaders | We're working on adding on-the-fly transforms in datasets.
Currently the only on-the-fly functions that can be applied are in `set_format` in which we transform the data in either numpy/torch/tf tensors or pandas.
For example
```python
dataset.set_format("torch")
```
applies `torch.Tensor` to the dataset entries on-the-fly.
We plan to extend this to user-defined formatting transforms.
For example
```python
dataset.set_format(transform=tokenize)
```
What do you think ? | Hi there,
I have a question regarding "on-the-fly" tokenization. This question was elicited by reading the "How to train a new language model from scratch using Transformers and Tokenizers" [here](https://huggingface.co/blog/how-to-train). Towards the end there is this sentence: "If your dataset is very large, you can opt to load and tokenize examples on the fly, rather than as a preprocessing step". I've tried coming up with a solution that would combine both `datasets` and `tokenizers`, but did not manage to find a good pattern.
I guess the solution would entail wrapping a dataset into a Pytorch dataset.
As a concrete example from the [docs](https://huggingface.co/transformers/custom_datasets.html)
```python
import torch
class SquadDataset(torch.utils.data.Dataset):
def __init__(self, encodings):
# instead of doing this beforehand, I'd like to do tokenization on the fly
self.encodings = encodings
def __getitem__(self, idx):
return {key: torch.tensor(val[idx]) for key, val in self.encodings.items()}
def __len__(self):
return len(self.encodings.input_ids)
train_dataset = SquadDataset(train_encodings)
```
How would one implement this with "on-the-fly" tokenization exploiting the vectorized capabilities of tokenizers?
----
Edit: I have come up with this solution. It does what I want, but I feel it's not very elegant
```python
class CustomPytorchDataset(Dataset):
def __init__(self):
self.dataset = some_hf_dataset(...)
self.tokenizer = BertTokenizerFast.from_pretrained("bert-base-uncased")
def __getitem__(self, batch_idx):
instance = self.dataset[text_col][batch_idx]
tokenized_text = self.tokenizer(instance, truncation=True, padding=True)
return tokenized_text
def __len__(self):
return len(self.dataset)
@staticmethod
def collate_fn(batch):
# batch is a list, however it will always contain 1 item because we should not use the
# batch_size argument as batch_size is controlled by the sampler
return {k: torch.tensor(v) for k, v in batch[0].items()}
torch_ds = CustomPytorchDataset()
# NOTE: batch_sampler returns list of integers and since here we have SequentialSampler
# it returns: [1, 2, 3], [4, 5, 6], etc. - check calling `list(batch_sampler)`
batch_sampler = BatchSampler(SequentialSampler(torch_ds), batch_size=3, drop_last=True)
# NOTE: no `batch_size` as now the it is controlled by the sampler!
dl = DataLoader(dataset=torch_ds, sampler=batch_sampler, collate_fn=torch_ds.collate_fn)
``` | 63 | ❓ On-the-fly tokenization with datasets, tokenizers, and torch Datasets and Dataloaders
Hi there,
I have a question regarding "on-the-fly" tokenization. This question was elicited by reading the "How to train a new language model from scratch using Transformers and Tokenizers" [here](https://huggingface.co/blog/how-to-train). Towards the end there is this sentence: "If your dataset is very large, you can opt to load and tokenize examples on the fly, rather than as a preprocessing step". I've tried coming up with a solution that would combine both `datasets` and `tokenizers`, but did not manage to find a good pattern.
I guess the solution would entail wrapping a dataset into a Pytorch dataset.
As a concrete example from the [docs](https://huggingface.co/transformers/custom_datasets.html)
```python
import torch
class SquadDataset(torch.utils.data.Dataset):
def __init__(self, encodings):
# instead of doing this beforehand, I'd like to do tokenization on the fly
self.encodings = encodings
def __getitem__(self, idx):
return {key: torch.tensor(val[idx]) for key, val in self.encodings.items()}
def __len__(self):
return len(self.encodings.input_ids)
train_dataset = SquadDataset(train_encodings)
```
How would one implement this with "on-the-fly" tokenization exploiting the vectorized capabilities of tokenizers?
----
Edit: I have come up with this solution. It does what I want, but I feel it's not very elegant
```python
class CustomPytorchDataset(Dataset):
def __init__(self):
self.dataset = some_hf_dataset(...)
self.tokenizer = BertTokenizerFast.from_pretrained("bert-base-uncased")
def __getitem__(self, batch_idx):
instance = self.dataset[text_col][batch_idx]
tokenized_text = self.tokenizer(instance, truncation=True, padding=True)
return tokenized_text
def __len__(self):
return len(self.dataset)
@staticmethod
def collate_fn(batch):
# batch is a list, however it will always contain 1 item because we should not use the
# batch_size argument as batch_size is controlled by the sampler
return {k: torch.tensor(v) for k, v in batch[0].items()}
torch_ds = CustomPytorchDataset()
# NOTE: batch_sampler returns list of integers and since here we have SequentialSampler
# it returns: [1, 2, 3], [4, 5, 6], etc. - check calling `list(batch_sampler)`
batch_sampler = BatchSampler(SequentialSampler(torch_ds), batch_size=3, drop_last=True)
# NOTE: no `batch_size` as now the it is controlled by the sampler!
dl = DataLoader(dataset=torch_ds, sampler=batch_sampler, collate_fn=torch_ds.collate_fn)
```
We're working on adding on-the-fly transforms in datasets.
Currently the only on-the-fly functions that can be applied are in `set_format` in which we transform the data in either numpy/torch/tf tensors or pandas.
For example
```python
dataset.set_format("torch")
```
applies `torch.Tensor` to the dataset entries on-the-fly.
We plan to extend this to user-defined formatting transforms.
For example
```python
dataset.set_format(transform=tokenize)
```
What do you think ? | [
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https://github.com/huggingface/datasets/issues/1110 | Using a feature named "_type" fails with certain operations | Thanks for reporting !
Indeed this is a keyword in the library that is used to encode/decode features to a python dictionary that we can save/load to json.
We can probably change `_type` to something that is less likely to collide with user feature names.
In this case we would want something backward compatible though.
Feel free to try a fix and open a PR, and to ping me if I can help :) | A column named `_type` leads to a `TypeError: unhashable type: 'dict'` for certain operations:
```python
from datasets import Dataset, concatenate_datasets
ds = Dataset.from_dict({"_type": ["whatever"]}).map()
concatenate_datasets([ds])
# or simply
Dataset(ds._data)
```
Context: We are using datasets to persist data coming from elasticsearch to feed to our pipeline, and elasticsearch has a `_type` field, hence the strange name of the column.
Not sure if you wish to support this specific column name, but if you do i would be happy to try a fix and provide a PR. I already had a look into it and i think the culprit is the `datasets.features.generate_from_dict` function. It uses the hard coded `_type` string to figure out if it reached the end of the nested feature object from a serialized dict.
Best wishes and keep up the awesome work! | 74 | Using a feature named "_type" fails with certain operations
A column named `_type` leads to a `TypeError: unhashable type: 'dict'` for certain operations:
```python
from datasets import Dataset, concatenate_datasets
ds = Dataset.from_dict({"_type": ["whatever"]}).map()
concatenate_datasets([ds])
# or simply
Dataset(ds._data)
```
Context: We are using datasets to persist data coming from elasticsearch to feed to our pipeline, and elasticsearch has a `_type` field, hence the strange name of the column.
Not sure if you wish to support this specific column name, but if you do i would be happy to try a fix and provide a PR. I already had a look into it and i think the culprit is the `datasets.features.generate_from_dict` function. It uses the hard coded `_type` string to figure out if it reached the end of the nested feature object from a serialized dict.
Best wishes and keep up the awesome work!
Thanks for reporting !
Indeed this is a keyword in the library that is used to encode/decode features to a python dictionary that we can save/load to json.
We can probably change `_type` to something that is less likely to collide with user feature names.
In this case we would want something backward compatible though.
Feel free to try a fix and open a PR, and to ping me if I can help :) | [
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https://github.com/huggingface/datasets/issues/1103 | Add support to download kaggle datasets | Hey, I think this is great idea. Any plan to integrate kaggle private datasets loading to `datasets`? | We can use API key | 17 | Add support to download kaggle datasets
We can use API key
Hey, I think this is great idea. Any plan to integrate kaggle private datasets loading to `datasets`? | [
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https://github.com/huggingface/datasets/issues/1064 | Not support links with 302 redirect | > Hi !
> This kind of links is now supported by the library since #1316
I updated links in TLC datasets to be the github links in this pull request
https://github.com/huggingface/datasets/pull/1737
Everything works now. Thank you. | I have an issue adding this download link https://github.com/jitkapat/thailitcorpus/releases/download/v.2.0/tlc_v.2.0.tar.gz
it might be because it is not a direct link (it returns 302 and redirects to aws that returns 403 for head requests).
```
r.head("https://github.com/jitkapat/thailitcorpus/releases/download/v.2.0/tlc_v.2.0.tar.gz", allow_redirects=True)
# <Response [403]>
``` | 37 | Not support links with 302 redirect
I have an issue adding this download link https://github.com/jitkapat/thailitcorpus/releases/download/v.2.0/tlc_v.2.0.tar.gz
it might be because it is not a direct link (it returns 302 and redirects to aws that returns 403 for head requests).
```
r.head("https://github.com/jitkapat/thailitcorpus/releases/download/v.2.0/tlc_v.2.0.tar.gz", allow_redirects=True)
# <Response [403]>
```
> Hi !
> This kind of links is now supported by the library since #1316
I updated links in TLC datasets to be the github links in this pull request
https://github.com/huggingface/datasets/pull/1737
Everything works now. Thank you. | [
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https://github.com/huggingface/datasets/issues/1046 | Dataset.map() turns tensors into lists? | A solution is to have the tokenizer return a list instead of a tensor, and then use `dataset_tok.set_format(type = 'torch')` to convert that list into a tensor. Still not sure if bug. | I apply `Dataset.map()` to a function that returns a dict of torch tensors (like a tokenizer from the repo transformers). However, in the mapped dataset, these tensors have turned to lists!
```import datasets
import torch
from datasets import load_dataset
print("version datasets", datasets.__version__)
dataset = load_dataset("snli", split='train[0:50]')
def tokenizer_fn(example):
# actually uses a tokenizer which does something like:
return {'input_ids': torch.tensor([[0, 1, 2]])}
print("First item in dataset:\n", dataset[0])
tokenized = tokenizer_fn(dataset[0])
print("Tokenized hyp:\n", tokenized)
dataset_tok = dataset.map(tokenizer_fn, batched=False,
remove_columns=['label', 'premise', 'hypothesis'])
print("Tokenized using map:\n", dataset_tok[0])
print(type(tokenized['input_ids']), type(dataset_tok[0]['input_ids']))
dataset_tok = dataset.map(tokenizer_fn, batched=False,
remove_columns=['label', 'premise', 'hypothesis'])
print("Tokenized using map:\n", dataset_tok[0])
print(type(tokenized['input_ids']), type(dataset_tok[0]['input_ids']))
```
The output is:
```
version datasets 1.1.3
Reusing dataset snli (/home/tom/.cache/huggingface/datasets/snli/plain_text/1.0.0/bb1102591c6230bd78813e229d5dd4c7fbf4fc478cec28f298761eb69e5b537c)
First item in dataset:
{'premise': 'A person on a horse jumps over a broken down airplane.', 'hypothesis': 'A person is training his horse for a competition.', 'label': 1}
Tokenized hyp:
{'input_ids': tensor([[0, 1, 2]])}
Loading cached processed dataset at /home/tom/.cache/huggingface/datasets/snli/plain_text/1.0.0/bb1102591c6230bd78813e229d5dd4c7fbf4fc478cec28f298761eb69e5b537c/cache-fe38f449fe9ac46f.arrow
Tokenized using map:
{'input_ids': [[0, 1, 2]]}
<class 'torch.Tensor'> <class 'list'>
```
Or am I doing something wrong?
| 32 | Dataset.map() turns tensors into lists?
I apply `Dataset.map()` to a function that returns a dict of torch tensors (like a tokenizer from the repo transformers). However, in the mapped dataset, these tensors have turned to lists!
```import datasets
import torch
from datasets import load_dataset
print("version datasets", datasets.__version__)
dataset = load_dataset("snli", split='train[0:50]')
def tokenizer_fn(example):
# actually uses a tokenizer which does something like:
return {'input_ids': torch.tensor([[0, 1, 2]])}
print("First item in dataset:\n", dataset[0])
tokenized = tokenizer_fn(dataset[0])
print("Tokenized hyp:\n", tokenized)
dataset_tok = dataset.map(tokenizer_fn, batched=False,
remove_columns=['label', 'premise', 'hypothesis'])
print("Tokenized using map:\n", dataset_tok[0])
print(type(tokenized['input_ids']), type(dataset_tok[0]['input_ids']))
dataset_tok = dataset.map(tokenizer_fn, batched=False,
remove_columns=['label', 'premise', 'hypothesis'])
print("Tokenized using map:\n", dataset_tok[0])
print(type(tokenized['input_ids']), type(dataset_tok[0]['input_ids']))
```
The output is:
```
version datasets 1.1.3
Reusing dataset snli (/home/tom/.cache/huggingface/datasets/snli/plain_text/1.0.0/bb1102591c6230bd78813e229d5dd4c7fbf4fc478cec28f298761eb69e5b537c)
First item in dataset:
{'premise': 'A person on a horse jumps over a broken down airplane.', 'hypothesis': 'A person is training his horse for a competition.', 'label': 1}
Tokenized hyp:
{'input_ids': tensor([[0, 1, 2]])}
Loading cached processed dataset at /home/tom/.cache/huggingface/datasets/snli/plain_text/1.0.0/bb1102591c6230bd78813e229d5dd4c7fbf4fc478cec28f298761eb69e5b537c/cache-fe38f449fe9ac46f.arrow
Tokenized using map:
{'input_ids': [[0, 1, 2]]}
<class 'torch.Tensor'> <class 'list'>
```
Or am I doing something wrong?
A solution is to have the tokenizer return a list instead of a tensor, and then use `dataset_tok.set_format(type = 'torch')` to convert that list into a tensor. Still not sure if bug. | [
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https://github.com/huggingface/datasets/issues/1046 | Dataset.map() turns tensors into lists? | It is expected behavior, you should set the format to `"torch"` as you mentioned to get pytorch tensors back.
By default datasets returns pure python objects. | I apply `Dataset.map()` to a function that returns a dict of torch tensors (like a tokenizer from the repo transformers). However, in the mapped dataset, these tensors have turned to lists!
```import datasets
import torch
from datasets import load_dataset
print("version datasets", datasets.__version__)
dataset = load_dataset("snli", split='train[0:50]')
def tokenizer_fn(example):
# actually uses a tokenizer which does something like:
return {'input_ids': torch.tensor([[0, 1, 2]])}
print("First item in dataset:\n", dataset[0])
tokenized = tokenizer_fn(dataset[0])
print("Tokenized hyp:\n", tokenized)
dataset_tok = dataset.map(tokenizer_fn, batched=False,
remove_columns=['label', 'premise', 'hypothesis'])
print("Tokenized using map:\n", dataset_tok[0])
print(type(tokenized['input_ids']), type(dataset_tok[0]['input_ids']))
dataset_tok = dataset.map(tokenizer_fn, batched=False,
remove_columns=['label', 'premise', 'hypothesis'])
print("Tokenized using map:\n", dataset_tok[0])
print(type(tokenized['input_ids']), type(dataset_tok[0]['input_ids']))
```
The output is:
```
version datasets 1.1.3
Reusing dataset snli (/home/tom/.cache/huggingface/datasets/snli/plain_text/1.0.0/bb1102591c6230bd78813e229d5dd4c7fbf4fc478cec28f298761eb69e5b537c)
First item in dataset:
{'premise': 'A person on a horse jumps over a broken down airplane.', 'hypothesis': 'A person is training his horse for a competition.', 'label': 1}
Tokenized hyp:
{'input_ids': tensor([[0, 1, 2]])}
Loading cached processed dataset at /home/tom/.cache/huggingface/datasets/snli/plain_text/1.0.0/bb1102591c6230bd78813e229d5dd4c7fbf4fc478cec28f298761eb69e5b537c/cache-fe38f449fe9ac46f.arrow
Tokenized using map:
{'input_ids': [[0, 1, 2]]}
<class 'torch.Tensor'> <class 'list'>
```
Or am I doing something wrong?
| 26 | Dataset.map() turns tensors into lists?
I apply `Dataset.map()` to a function that returns a dict of torch tensors (like a tokenizer from the repo transformers). However, in the mapped dataset, these tensors have turned to lists!
```import datasets
import torch
from datasets import load_dataset
print("version datasets", datasets.__version__)
dataset = load_dataset("snli", split='train[0:50]')
def tokenizer_fn(example):
# actually uses a tokenizer which does something like:
return {'input_ids': torch.tensor([[0, 1, 2]])}
print("First item in dataset:\n", dataset[0])
tokenized = tokenizer_fn(dataset[0])
print("Tokenized hyp:\n", tokenized)
dataset_tok = dataset.map(tokenizer_fn, batched=False,
remove_columns=['label', 'premise', 'hypothesis'])
print("Tokenized using map:\n", dataset_tok[0])
print(type(tokenized['input_ids']), type(dataset_tok[0]['input_ids']))
dataset_tok = dataset.map(tokenizer_fn, batched=False,
remove_columns=['label', 'premise', 'hypothesis'])
print("Tokenized using map:\n", dataset_tok[0])
print(type(tokenized['input_ids']), type(dataset_tok[0]['input_ids']))
```
The output is:
```
version datasets 1.1.3
Reusing dataset snli (/home/tom/.cache/huggingface/datasets/snli/plain_text/1.0.0/bb1102591c6230bd78813e229d5dd4c7fbf4fc478cec28f298761eb69e5b537c)
First item in dataset:
{'premise': 'A person on a horse jumps over a broken down airplane.', 'hypothesis': 'A person is training his horse for a competition.', 'label': 1}
Tokenized hyp:
{'input_ids': tensor([[0, 1, 2]])}
Loading cached processed dataset at /home/tom/.cache/huggingface/datasets/snli/plain_text/1.0.0/bb1102591c6230bd78813e229d5dd4c7fbf4fc478cec28f298761eb69e5b537c/cache-fe38f449fe9ac46f.arrow
Tokenized using map:
{'input_ids': [[0, 1, 2]]}
<class 'torch.Tensor'> <class 'list'>
```
Or am I doing something wrong?
It is expected behavior, you should set the format to `"torch"` as you mentioned to get pytorch tensors back.
By default datasets returns pure python objects. | [
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https://github.com/huggingface/datasets/issues/1004 | how large datasets are handled under the hood | This library uses Apache Arrow under the hood to store datasets on disk.
The advantage of Apache Arrow is that it allows to memory map the dataset. This allows to load datasets bigger than memory and with almost no RAM usage. It also offers excellent I/O speed.
For example when you access one element or one batch
```python
from datasets import load_dataset
squad = load_dataset("squad", split="train")
first_element = squad[0]
one_batch = squad[:8]
```
then only this element/batch is loaded in memory, while the rest of the dataset is memory mapped. | Hi
I want to use multiple large datasets with a mapping style dataloader, where they cannot fit into memory, could you tell me how you handled the datasets under the hood? is this you bring all in memory in case of mapping style ones? or is this some sharding under the hood and you bring in memory when necessary, thanks | 90 | how large datasets are handled under the hood
Hi
I want to use multiple large datasets with a mapping style dataloader, where they cannot fit into memory, could you tell me how you handled the datasets under the hood? is this you bring all in memory in case of mapping style ones? or is this some sharding under the hood and you bring in memory when necessary, thanks
This library uses Apache Arrow under the hood to store datasets on disk.
The advantage of Apache Arrow is that it allows to memory map the dataset. This allows to load datasets bigger than memory and with almost no RAM usage. It also offers excellent I/O speed.
For example when you access one element or one batch
```python
from datasets import load_dataset
squad = load_dataset("squad", split="train")
first_element = squad[0]
one_batch = squad[:8]
```
then only this element/batch is loaded in memory, while the rest of the dataset is memory mapped. | [
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https://github.com/huggingface/datasets/issues/1004 | how large datasets are handled under the hood | How can we change how much data is loaded to memory with Arrow? I think that I am having some performance issue with it. When Arrow loads the data from disk it does it in multiprocess? It's almost twice slower training with arrow than in memory.
EDIT:
My fault! I had not seen the `dataloader_num_workers` in `TrainingArguments` ! Now I can parallelize and go fast! Sorry, and thanks. | Hi
I want to use multiple large datasets with a mapping style dataloader, where they cannot fit into memory, could you tell me how you handled the datasets under the hood? is this you bring all in memory in case of mapping style ones? or is this some sharding under the hood and you bring in memory when necessary, thanks | 68 | how large datasets are handled under the hood
Hi
I want to use multiple large datasets with a mapping style dataloader, where they cannot fit into memory, could you tell me how you handled the datasets under the hood? is this you bring all in memory in case of mapping style ones? or is this some sharding under the hood and you bring in memory when necessary, thanks
How can we change how much data is loaded to memory with Arrow? I think that I am having some performance issue with it. When Arrow loads the data from disk it does it in multiprocess? It's almost twice slower training with arrow than in memory.
EDIT:
My fault! I had not seen the `dataloader_num_workers` in `TrainingArguments` ! Now I can parallelize and go fast! Sorry, and thanks. | [
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https://github.com/huggingface/datasets/issues/1004 | how large datasets are handled under the hood | > How can we change how much data is loaded to memory with Arrow? I think that I am having some performance issue with it. When Arrow loads the data from disk it does it in multiprocess? It's almost twice slower training with arrow than in memory.
Loading arrow data from disk is done with memory-mapping. This allows to load huge datasets without filling your RAM.
Memory mapping is almost instantaneous and is done within one process.
Then, the speed of querying examples from the dataset is I/O bounded depending on your disk. If it's an SSD then fetching examples from the dataset will be very fast.
But since the I/O speed of an SSD is lower than the one of RAM it's expected to be slower to fetch data from disk than from memory.
Still, if you load the dataset in different processes then it can be faster but there will still be the I/O bottleneck of the disk.
> EDIT:
> My fault! I had not seen the `dataloader_num_workers` in `TrainingArguments` ! Now I can parallelize and go fast! Sorry, and thanks.
Ok let me know if that helps !
| Hi
I want to use multiple large datasets with a mapping style dataloader, where they cannot fit into memory, could you tell me how you handled the datasets under the hood? is this you bring all in memory in case of mapping style ones? or is this some sharding under the hood and you bring in memory when necessary, thanks | 192 | how large datasets are handled under the hood
Hi
I want to use multiple large datasets with a mapping style dataloader, where they cannot fit into memory, could you tell me how you handled the datasets under the hood? is this you bring all in memory in case of mapping style ones? or is this some sharding under the hood and you bring in memory when necessary, thanks
> How can we change how much data is loaded to memory with Arrow? I think that I am having some performance issue with it. When Arrow loads the data from disk it does it in multiprocess? It's almost twice slower training with arrow than in memory.
Loading arrow data from disk is done with memory-mapping. This allows to load huge datasets without filling your RAM.
Memory mapping is almost instantaneous and is done within one process.
Then, the speed of querying examples from the dataset is I/O bounded depending on your disk. If it's an SSD then fetching examples from the dataset will be very fast.
But since the I/O speed of an SSD is lower than the one of RAM it's expected to be slower to fetch data from disk than from memory.
Still, if you load the dataset in different processes then it can be faster but there will still be the I/O bottleneck of the disk.
> EDIT:
> My fault! I had not seen the `dataloader_num_workers` in `TrainingArguments` ! Now I can parallelize and go fast! Sorry, and thanks.
Ok let me know if that helps !
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https://github.com/huggingface/datasets/issues/996 | NotADirectoryError while loading the CNN/Dailymail dataset | Looks like the google drive download failed.
I'm getting a `Google Drive - Quota exceeded` error while looking at the downloaded file.
We should consider finding a better host than google drive for this dataset imo
related : #873 #864 |
Downloading and preparing dataset cnn_dailymail/3.0.0 (download: 558.32 MiB, generated: 1.28 GiB, post-processed: Unknown size, total: 1.82 GiB) to /root/.cache/huggingface/datasets/cnn_dailymail/3.0.0/3.0.0/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602...
---------------------------------------------------------------------------
NotADirectoryError Traceback (most recent call last)
<ipython-input-9-cd4bf8bea840> in <module>()
22
23
---> 24 train = load_dataset('cnn_dailymail', '3.0.0', split='train')
25 validation = load_dataset('cnn_dailymail', '3.0.0', split='validation')
26 test = load_dataset('cnn_dailymail', '3.0.0', split='test')
5 frames
/root/.cache/huggingface/modules/datasets_modules/datasets/cnn_dailymail/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602/cnn_dailymail.py in _find_files(dl_paths, publisher, url_dict)
132 else:
133 logging.fatal("Unsupported publisher: %s", publisher)
--> 134 files = sorted(os.listdir(top_dir))
135
136 ret_files = []
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories' | 40 | NotADirectoryError while loading the CNN/Dailymail dataset
Downloading and preparing dataset cnn_dailymail/3.0.0 (download: 558.32 MiB, generated: 1.28 GiB, post-processed: Unknown size, total: 1.82 GiB) to /root/.cache/huggingface/datasets/cnn_dailymail/3.0.0/3.0.0/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602...
---------------------------------------------------------------------------
NotADirectoryError Traceback (most recent call last)
<ipython-input-9-cd4bf8bea840> in <module>()
22
23
---> 24 train = load_dataset('cnn_dailymail', '3.0.0', split='train')
25 validation = load_dataset('cnn_dailymail', '3.0.0', split='validation')
26 test = load_dataset('cnn_dailymail', '3.0.0', split='test')
5 frames
/root/.cache/huggingface/modules/datasets_modules/datasets/cnn_dailymail/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602/cnn_dailymail.py in _find_files(dl_paths, publisher, url_dict)
132 else:
133 logging.fatal("Unsupported publisher: %s", publisher)
--> 134 files = sorted(os.listdir(top_dir))
135
136 ret_files = []
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories'
Looks like the google drive download failed.
I'm getting a `Google Drive - Quota exceeded` error while looking at the downloaded file.
We should consider finding a better host than google drive for this dataset imo
related : #873 #864 | [
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] |
https://github.com/huggingface/datasets/issues/996 | NotADirectoryError while loading the CNN/Dailymail dataset | It is working now, thank you.
Should I leave this issue open to address the Quota-exceeded error? |
Downloading and preparing dataset cnn_dailymail/3.0.0 (download: 558.32 MiB, generated: 1.28 GiB, post-processed: Unknown size, total: 1.82 GiB) to /root/.cache/huggingface/datasets/cnn_dailymail/3.0.0/3.0.0/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602...
---------------------------------------------------------------------------
NotADirectoryError Traceback (most recent call last)
<ipython-input-9-cd4bf8bea840> in <module>()
22
23
---> 24 train = load_dataset('cnn_dailymail', '3.0.0', split='train')
25 validation = load_dataset('cnn_dailymail', '3.0.0', split='validation')
26 test = load_dataset('cnn_dailymail', '3.0.0', split='test')
5 frames
/root/.cache/huggingface/modules/datasets_modules/datasets/cnn_dailymail/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602/cnn_dailymail.py in _find_files(dl_paths, publisher, url_dict)
132 else:
133 logging.fatal("Unsupported publisher: %s", publisher)
--> 134 files = sorted(os.listdir(top_dir))
135
136 ret_files = []
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories' | 17 | NotADirectoryError while loading the CNN/Dailymail dataset
Downloading and preparing dataset cnn_dailymail/3.0.0 (download: 558.32 MiB, generated: 1.28 GiB, post-processed: Unknown size, total: 1.82 GiB) to /root/.cache/huggingface/datasets/cnn_dailymail/3.0.0/3.0.0/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602...
---------------------------------------------------------------------------
NotADirectoryError Traceback (most recent call last)
<ipython-input-9-cd4bf8bea840> in <module>()
22
23
---> 24 train = load_dataset('cnn_dailymail', '3.0.0', split='train')
25 validation = load_dataset('cnn_dailymail', '3.0.0', split='validation')
26 test = load_dataset('cnn_dailymail', '3.0.0', split='test')
5 frames
/root/.cache/huggingface/modules/datasets_modules/datasets/cnn_dailymail/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602/cnn_dailymail.py in _find_files(dl_paths, publisher, url_dict)
132 else:
133 logging.fatal("Unsupported publisher: %s", publisher)
--> 134 files = sorted(os.listdir(top_dir))
135
136 ret_files = []
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories'
It is working now, thank you.
Should I leave this issue open to address the Quota-exceeded error? | [
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] |
https://github.com/huggingface/datasets/issues/996 | NotADirectoryError while loading the CNN/Dailymail dataset | I've looked into it and couldn't find a solution. This looks like a Google Drive limitation..
Please try to use other hosts when possible |
Downloading and preparing dataset cnn_dailymail/3.0.0 (download: 558.32 MiB, generated: 1.28 GiB, post-processed: Unknown size, total: 1.82 GiB) to /root/.cache/huggingface/datasets/cnn_dailymail/3.0.0/3.0.0/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602...
---------------------------------------------------------------------------
NotADirectoryError Traceback (most recent call last)
<ipython-input-9-cd4bf8bea840> in <module>()
22
23
---> 24 train = load_dataset('cnn_dailymail', '3.0.0', split='train')
25 validation = load_dataset('cnn_dailymail', '3.0.0', split='validation')
26 test = load_dataset('cnn_dailymail', '3.0.0', split='test')
5 frames
/root/.cache/huggingface/modules/datasets_modules/datasets/cnn_dailymail/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602/cnn_dailymail.py in _find_files(dl_paths, publisher, url_dict)
132 else:
133 logging.fatal("Unsupported publisher: %s", publisher)
--> 134 files = sorted(os.listdir(top_dir))
135
136 ret_files = []
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories' | 24 | NotADirectoryError while loading the CNN/Dailymail dataset
Downloading and preparing dataset cnn_dailymail/3.0.0 (download: 558.32 MiB, generated: 1.28 GiB, post-processed: Unknown size, total: 1.82 GiB) to /root/.cache/huggingface/datasets/cnn_dailymail/3.0.0/3.0.0/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602...
---------------------------------------------------------------------------
NotADirectoryError Traceback (most recent call last)
<ipython-input-9-cd4bf8bea840> in <module>()
22
23
---> 24 train = load_dataset('cnn_dailymail', '3.0.0', split='train')
25 validation = load_dataset('cnn_dailymail', '3.0.0', split='validation')
26 test = load_dataset('cnn_dailymail', '3.0.0', split='test')
5 frames
/root/.cache/huggingface/modules/datasets_modules/datasets/cnn_dailymail/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602/cnn_dailymail.py in _find_files(dl_paths, publisher, url_dict)
132 else:
133 logging.fatal("Unsupported publisher: %s", publisher)
--> 134 files = sorted(os.listdir(top_dir))
135
136 ret_files = []
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories'
I've looked into it and couldn't find a solution. This looks like a Google Drive limitation..
Please try to use other hosts when possible | [
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https://github.com/huggingface/datasets/issues/996 | NotADirectoryError while loading the CNN/Dailymail dataset | The original links are google drive links. Would it be feasible for HF to maintain their own servers for this? Also, I think the same issue must also exist with TFDS. |
Downloading and preparing dataset cnn_dailymail/3.0.0 (download: 558.32 MiB, generated: 1.28 GiB, post-processed: Unknown size, total: 1.82 GiB) to /root/.cache/huggingface/datasets/cnn_dailymail/3.0.0/3.0.0/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602...
---------------------------------------------------------------------------
NotADirectoryError Traceback (most recent call last)
<ipython-input-9-cd4bf8bea840> in <module>()
22
23
---> 24 train = load_dataset('cnn_dailymail', '3.0.0', split='train')
25 validation = load_dataset('cnn_dailymail', '3.0.0', split='validation')
26 test = load_dataset('cnn_dailymail', '3.0.0', split='test')
5 frames
/root/.cache/huggingface/modules/datasets_modules/datasets/cnn_dailymail/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602/cnn_dailymail.py in _find_files(dl_paths, publisher, url_dict)
132 else:
133 logging.fatal("Unsupported publisher: %s", publisher)
--> 134 files = sorted(os.listdir(top_dir))
135
136 ret_files = []
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories' | 31 | NotADirectoryError while loading the CNN/Dailymail dataset
Downloading and preparing dataset cnn_dailymail/3.0.0 (download: 558.32 MiB, generated: 1.28 GiB, post-processed: Unknown size, total: 1.82 GiB) to /root/.cache/huggingface/datasets/cnn_dailymail/3.0.0/3.0.0/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602...
---------------------------------------------------------------------------
NotADirectoryError Traceback (most recent call last)
<ipython-input-9-cd4bf8bea840> in <module>()
22
23
---> 24 train = load_dataset('cnn_dailymail', '3.0.0', split='train')
25 validation = load_dataset('cnn_dailymail', '3.0.0', split='validation')
26 test = load_dataset('cnn_dailymail', '3.0.0', split='test')
5 frames
/root/.cache/huggingface/modules/datasets_modules/datasets/cnn_dailymail/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602/cnn_dailymail.py in _find_files(dl_paths, publisher, url_dict)
132 else:
133 logging.fatal("Unsupported publisher: %s", publisher)
--> 134 files = sorted(os.listdir(top_dir))
135
136 ret_files = []
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories'
The original links are google drive links. Would it be feasible for HF to maintain their own servers for this? Also, I think the same issue must also exist with TFDS. | [
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] |
https://github.com/huggingface/datasets/issues/996 | NotADirectoryError while loading the CNN/Dailymail dataset | It's possible to host data on our side but we should ask the authors. TFDS has the same issue and doesn't have a solution either afaik.
Otherwise you can use the google drive link, but it it's not that convenient because of this quota issue. |
Downloading and preparing dataset cnn_dailymail/3.0.0 (download: 558.32 MiB, generated: 1.28 GiB, post-processed: Unknown size, total: 1.82 GiB) to /root/.cache/huggingface/datasets/cnn_dailymail/3.0.0/3.0.0/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602...
---------------------------------------------------------------------------
NotADirectoryError Traceback (most recent call last)
<ipython-input-9-cd4bf8bea840> in <module>()
22
23
---> 24 train = load_dataset('cnn_dailymail', '3.0.0', split='train')
25 validation = load_dataset('cnn_dailymail', '3.0.0', split='validation')
26 test = load_dataset('cnn_dailymail', '3.0.0', split='test')
5 frames
/root/.cache/huggingface/modules/datasets_modules/datasets/cnn_dailymail/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602/cnn_dailymail.py in _find_files(dl_paths, publisher, url_dict)
132 else:
133 logging.fatal("Unsupported publisher: %s", publisher)
--> 134 files = sorted(os.listdir(top_dir))
135
136 ret_files = []
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories' | 45 | NotADirectoryError while loading the CNN/Dailymail dataset
Downloading and preparing dataset cnn_dailymail/3.0.0 (download: 558.32 MiB, generated: 1.28 GiB, post-processed: Unknown size, total: 1.82 GiB) to /root/.cache/huggingface/datasets/cnn_dailymail/3.0.0/3.0.0/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602...
---------------------------------------------------------------------------
NotADirectoryError Traceback (most recent call last)
<ipython-input-9-cd4bf8bea840> in <module>()
22
23
---> 24 train = load_dataset('cnn_dailymail', '3.0.0', split='train')
25 validation = load_dataset('cnn_dailymail', '3.0.0', split='validation')
26 test = load_dataset('cnn_dailymail', '3.0.0', split='test')
5 frames
/root/.cache/huggingface/modules/datasets_modules/datasets/cnn_dailymail/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602/cnn_dailymail.py in _find_files(dl_paths, publisher, url_dict)
132 else:
133 logging.fatal("Unsupported publisher: %s", publisher)
--> 134 files = sorted(os.listdir(top_dir))
135
136 ret_files = []
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories'
It's possible to host data on our side but we should ask the authors. TFDS has the same issue and doesn't have a solution either afaik.
Otherwise you can use the google drive link, but it it's not that convenient because of this quota issue. | [
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] |
https://github.com/huggingface/datasets/issues/996 | NotADirectoryError while loading the CNN/Dailymail dataset | Okay. I imagine asking every author who shares their dataset on Google Drive will also be cumbersome. |
Downloading and preparing dataset cnn_dailymail/3.0.0 (download: 558.32 MiB, generated: 1.28 GiB, post-processed: Unknown size, total: 1.82 GiB) to /root/.cache/huggingface/datasets/cnn_dailymail/3.0.0/3.0.0/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602...
---------------------------------------------------------------------------
NotADirectoryError Traceback (most recent call last)
<ipython-input-9-cd4bf8bea840> in <module>()
22
23
---> 24 train = load_dataset('cnn_dailymail', '3.0.0', split='train')
25 validation = load_dataset('cnn_dailymail', '3.0.0', split='validation')
26 test = load_dataset('cnn_dailymail', '3.0.0', split='test')
5 frames
/root/.cache/huggingface/modules/datasets_modules/datasets/cnn_dailymail/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602/cnn_dailymail.py in _find_files(dl_paths, publisher, url_dict)
132 else:
133 logging.fatal("Unsupported publisher: %s", publisher)
--> 134 files = sorted(os.listdir(top_dir))
135
136 ret_files = []
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories' | 17 | NotADirectoryError while loading the CNN/Dailymail dataset
Downloading and preparing dataset cnn_dailymail/3.0.0 (download: 558.32 MiB, generated: 1.28 GiB, post-processed: Unknown size, total: 1.82 GiB) to /root/.cache/huggingface/datasets/cnn_dailymail/3.0.0/3.0.0/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602...
---------------------------------------------------------------------------
NotADirectoryError Traceback (most recent call last)
<ipython-input-9-cd4bf8bea840> in <module>()
22
23
---> 24 train = load_dataset('cnn_dailymail', '3.0.0', split='train')
25 validation = load_dataset('cnn_dailymail', '3.0.0', split='validation')
26 test = load_dataset('cnn_dailymail', '3.0.0', split='test')
5 frames
/root/.cache/huggingface/modules/datasets_modules/datasets/cnn_dailymail/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602/cnn_dailymail.py in _find_files(dl_paths, publisher, url_dict)
132 else:
133 logging.fatal("Unsupported publisher: %s", publisher)
--> 134 files = sorted(os.listdir(top_dir))
135
136 ret_files = []
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories'
Okay. I imagine asking every author who shares their dataset on Google Drive will also be cumbersome. | [
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https://github.com/huggingface/datasets/issues/996 | NotADirectoryError while loading the CNN/Dailymail dataset | Not as long as the data is stored on GG drive unfortunately.
Maybe we can ask if there's a mirror ?
Hi @JafferWilson is there a download link to get cnn dailymail from another host than GG drive ?
To give you some context, this library provides tools to download and process datasets. For CNN DailyMail the data are downloaded from the link you provide on your github repository. Unfortunately because of GG drive quotas, many users are not able to load this dataset. |
Downloading and preparing dataset cnn_dailymail/3.0.0 (download: 558.32 MiB, generated: 1.28 GiB, post-processed: Unknown size, total: 1.82 GiB) to /root/.cache/huggingface/datasets/cnn_dailymail/3.0.0/3.0.0/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602...
---------------------------------------------------------------------------
NotADirectoryError Traceback (most recent call last)
<ipython-input-9-cd4bf8bea840> in <module>()
22
23
---> 24 train = load_dataset('cnn_dailymail', '3.0.0', split='train')
25 validation = load_dataset('cnn_dailymail', '3.0.0', split='validation')
26 test = load_dataset('cnn_dailymail', '3.0.0', split='test')
5 frames
/root/.cache/huggingface/modules/datasets_modules/datasets/cnn_dailymail/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602/cnn_dailymail.py in _find_files(dl_paths, publisher, url_dict)
132 else:
133 logging.fatal("Unsupported publisher: %s", publisher)
--> 134 files = sorted(os.listdir(top_dir))
135
136 ret_files = []
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories' | 84 | NotADirectoryError while loading the CNN/Dailymail dataset
Downloading and preparing dataset cnn_dailymail/3.0.0 (download: 558.32 MiB, generated: 1.28 GiB, post-processed: Unknown size, total: 1.82 GiB) to /root/.cache/huggingface/datasets/cnn_dailymail/3.0.0/3.0.0/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602...
---------------------------------------------------------------------------
NotADirectoryError Traceback (most recent call last)
<ipython-input-9-cd4bf8bea840> in <module>()
22
23
---> 24 train = load_dataset('cnn_dailymail', '3.0.0', split='train')
25 validation = load_dataset('cnn_dailymail', '3.0.0', split='validation')
26 test = load_dataset('cnn_dailymail', '3.0.0', split='test')
5 frames
/root/.cache/huggingface/modules/datasets_modules/datasets/cnn_dailymail/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602/cnn_dailymail.py in _find_files(dl_paths, publisher, url_dict)
132 else:
133 logging.fatal("Unsupported publisher: %s", publisher)
--> 134 files = sorted(os.listdir(top_dir))
135
136 ret_files = []
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories'
Not as long as the data is stored on GG drive unfortunately.
Maybe we can ask if there's a mirror ?
Hi @JafferWilson is there a download link to get cnn dailymail from another host than GG drive ?
To give you some context, this library provides tools to download and process datasets. For CNN DailyMail the data are downloaded from the link you provide on your github repository. Unfortunately because of GG drive quotas, many users are not able to load this dataset. | [
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https://github.com/huggingface/datasets/issues/996 | NotADirectoryError while loading the CNN/Dailymail dataset | Thanks for the link @mrazizi !
Apparently the original authors don't host the dataset themselves ("for legal reasons", source [here](https://github.com/abisee/cnn-dailymail/issues/9)). |
Downloading and preparing dataset cnn_dailymail/3.0.0 (download: 558.32 MiB, generated: 1.28 GiB, post-processed: Unknown size, total: 1.82 GiB) to /root/.cache/huggingface/datasets/cnn_dailymail/3.0.0/3.0.0/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602...
---------------------------------------------------------------------------
NotADirectoryError Traceback (most recent call last)
<ipython-input-9-cd4bf8bea840> in <module>()
22
23
---> 24 train = load_dataset('cnn_dailymail', '3.0.0', split='train')
25 validation = load_dataset('cnn_dailymail', '3.0.0', split='validation')
26 test = load_dataset('cnn_dailymail', '3.0.0', split='test')
5 frames
/root/.cache/huggingface/modules/datasets_modules/datasets/cnn_dailymail/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602/cnn_dailymail.py in _find_files(dl_paths, publisher, url_dict)
132 else:
133 logging.fatal("Unsupported publisher: %s", publisher)
--> 134 files = sorted(os.listdir(top_dir))
135
136 ret_files = []
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories' | 20 | NotADirectoryError while loading the CNN/Dailymail dataset
Downloading and preparing dataset cnn_dailymail/3.0.0 (download: 558.32 MiB, generated: 1.28 GiB, post-processed: Unknown size, total: 1.82 GiB) to /root/.cache/huggingface/datasets/cnn_dailymail/3.0.0/3.0.0/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602...
---------------------------------------------------------------------------
NotADirectoryError Traceback (most recent call last)
<ipython-input-9-cd4bf8bea840> in <module>()
22
23
---> 24 train = load_dataset('cnn_dailymail', '3.0.0', split='train')
25 validation = load_dataset('cnn_dailymail', '3.0.0', split='validation')
26 test = load_dataset('cnn_dailymail', '3.0.0', split='test')
5 frames
/root/.cache/huggingface/modules/datasets_modules/datasets/cnn_dailymail/0128610a44e10f25b4af6689441c72af86205282d26399642f7db38fa7535602/cnn_dailymail.py in _find_files(dl_paths, publisher, url_dict)
132 else:
133 logging.fatal("Unsupported publisher: %s", publisher)
--> 134 files = sorted(os.listdir(top_dir))
135
136 ret_files = []
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories'
Thanks for the link @mrazizi !
Apparently the original authors don't host the dataset themselves ("for legal reasons", source [here](https://github.com/abisee/cnn-dailymail/issues/9)). | [
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https://github.com/huggingface/datasets/issues/993 | Problem downloading amazon_reviews_multi | Hi @hfawaz ! This is working fine for me. Is it a repeated occurence? Have you tried from the latest verion? | Thanks for adding the dataset.
After trying to load the dataset, I am getting the following error:
`ConnectionError: Couldn't reach https://amazon-reviews-ml.s3-us-west-2.amazonaws.com/json/train/dataset_fr_train.json
`
I used the following code to load the dataset:
`load_dataset(
dataset_name,
"all_languages",
cache_dir=".data"
)`
I am using version 1.1.3 of `datasets`
Note that I can perform a successfull `wget https://amazon-reviews-ml.s3-us-west-2.amazonaws.com/json/train/dataset_fr_train.json` | 21 | Problem downloading amazon_reviews_multi
Thanks for adding the dataset.
After trying to load the dataset, I am getting the following error:
`ConnectionError: Couldn't reach https://amazon-reviews-ml.s3-us-west-2.amazonaws.com/json/train/dataset_fr_train.json
`
I used the following code to load the dataset:
`load_dataset(
dataset_name,
"all_languages",
cache_dir=".data"
)`
I am using version 1.1.3 of `datasets`
Note that I can perform a successfull `wget https://amazon-reviews-ml.s3-us-west-2.amazonaws.com/json/train/dataset_fr_train.json`
Hi @hfawaz ! This is working fine for me. Is it a repeated occurence? Have you tried from the latest verion? | [
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] |
https://github.com/huggingface/datasets/issues/988 | making sure datasets are not loaded in memory and distributed training of them | my implementation of sharding per TPU core: https://github.com/google-research/ruse/blob/d4dd58a2d8efe0ffb1a9e9e77e3228d6824d3c3c/seq2seq/trainers/t5_trainer.py#L316
my implementation of dataloader for this case https://github.com/google-research/ruse/blob/d4dd58a2d8efe0ffb1a9e9e77e3228d6824d3c3c/seq2seq/tasks/tasks.py#L496 | Hi
I am dealing with large-scale datasets which I need to train distributedly, I used the shard function to divide the dataset across the cores, without any sampler, this does not work for distributed training and does not become any faster than 1 TPU core. 1) how I can make sure data is not loaded in memory 2) in case of distributed training with iterative datasets which measures needs to be taken? Is this all sharding the data only. I was wondering if there can be possibility for me to discuss this with someone with distributed training with iterative datasets using dataset library. thanks | 16 | making sure datasets are not loaded in memory and distributed training of them
Hi
I am dealing with large-scale datasets which I need to train distributedly, I used the shard function to divide the dataset across the cores, without any sampler, this does not work for distributed training and does not become any faster than 1 TPU core. 1) how I can make sure data is not loaded in memory 2) in case of distributed training with iterative datasets which measures needs to be taken? Is this all sharding the data only. I was wondering if there can be possibility for me to discuss this with someone with distributed training with iterative datasets using dataset library. thanks
my implementation of sharding per TPU core: https://github.com/google-research/ruse/blob/d4dd58a2d8efe0ffb1a9e9e77e3228d6824d3c3c/seq2seq/trainers/t5_trainer.py#L316
my implementation of dataloader for this case https://github.com/google-research/ruse/blob/d4dd58a2d8efe0ffb1a9e9e77e3228d6824d3c3c/seq2seq/tasks/tasks.py#L496 | [
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] |
https://github.com/huggingface/datasets/issues/961 | sample multiple datasets | here I share my dataloader currently for multiple tasks: https://gist.github.com/rabeehkarimimahabadi/39f9444a4fb6f53dcc4fca5d73bf8195
I need to train my model distributedly with this dataloader, "MultiTasksataloader", currently this does not work in distributed fasion,
to save on memory I tried to use iterative datasets, could you have a look in this dataloader and tell me if this is indeed the case? not sure how to make datasets being iterative to not load them in memory, then I remove the sampler for dataloader, and shard the data per core, could you tell me please how I should implement this case in datasets library? and how do you find my implementation in terms of correctness? thanks
| Hi
I am dealing with multiple datasets, I need to have a dataloader over them with a condition that in each batch data samples are coming from one of the datasets. My main question is:
- I need to have a way to sample the datasets first with some weights, lets say 2x dataset1 1x dataset2, could you point me how I can do it
sub-questions:
- I want to concat sampled datasets and define one dataloader on it, then I need a way to make sure batches come from 1 dataset in each iteration, could you assist me how I can do?
- I use iterative-type of datasets, but I need a method of shuffling still since it brings accuracy performance issues if not doing it, thanks for the help. | 109 | sample multiple datasets
Hi
I am dealing with multiple datasets, I need to have a dataloader over them with a condition that in each batch data samples are coming from one of the datasets. My main question is:
- I need to have a way to sample the datasets first with some weights, lets say 2x dataset1 1x dataset2, could you point me how I can do it
sub-questions:
- I want to concat sampled datasets and define one dataloader on it, then I need a way to make sure batches come from 1 dataset in each iteration, could you assist me how I can do?
- I use iterative-type of datasets, but I need a method of shuffling still since it brings accuracy performance issues if not doing it, thanks for the help.
here I share my dataloader currently for multiple tasks: https://gist.github.com/rabeehkarimimahabadi/39f9444a4fb6f53dcc4fca5d73bf8195
I need to train my model distributedly with this dataloader, "MultiTasksataloader", currently this does not work in distributed fasion,
to save on memory I tried to use iterative datasets, could you have a look in this dataloader and tell me if this is indeed the case? not sure how to make datasets being iterative to not load them in memory, then I remove the sampler for dataloader, and shard the data per core, could you tell me please how I should implement this case in datasets library? and how do you find my implementation in terms of correctness? thanks
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] |
https://github.com/huggingface/datasets/issues/937 | Local machine/cluster Beam Datasets example/tutorial | I tried to make it run once on the SparkRunner but it seems that this runner has some issues when it is run locally.
From my experience the DirectRunner is fine though, even if it's clearly not memory efficient.
It would be awesome though to make it work locally on a SparkRunner !
Did you manage to make your processing work ? | Hi,
I'm wondering if https://huggingface.co/docs/datasets/beam_dataset.html has an non-GCP or non-Dataflow version example/tutorial? I tried to migrate it to run on DirectRunner and SparkRunner, however, there were way too many runtime errors that I had to fix during the process, and even so I wasn't able to get either runner correctly producing the desired output.
Thanks!
Shang | 62 | Local machine/cluster Beam Datasets example/tutorial
Hi,
I'm wondering if https://huggingface.co/docs/datasets/beam_dataset.html has an non-GCP or non-Dataflow version example/tutorial? I tried to migrate it to run on DirectRunner and SparkRunner, however, there were way too many runtime errors that I had to fix during the process, and even so I wasn't able to get either runner correctly producing the desired output.
Thanks!
Shang
I tried to make it run once on the SparkRunner but it seems that this runner has some issues when it is run locally.
From my experience the DirectRunner is fine though, even if it's clearly not memory efficient.
It would be awesome though to make it work locally on a SparkRunner !
Did you manage to make your processing work ? | [
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https://github.com/huggingface/datasets/issues/919 | wrong length with datasets | Also, I cannot first convert it to torch format, since huggingface seq2seq_trainer codes process the datasets afterwards during datacollector function to make it optimize for TPUs. | Hi
I have a MRPC dataset which I convert it to seq2seq format, then this is of this format:
`Dataset(features: {'src_texts': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 10)
`
I feed it to a dataloader:
```
dataloader = DataLoader(
train_dataset,
batch_size=self.args.train_batch_size,
sampler=train_sampler,
collate_fn=self.data_collator,
drop_last=self.args.dataloader_drop_last,
num_workers=self.args.dataloader_num_workers,
)
```
now if I type len(dataloader) this is 1, which is wrong, and this needs to be 10. could you assist me please? thanks
| 26 | wrong length with datasets
Hi
I have a MRPC dataset which I convert it to seq2seq format, then this is of this format:
`Dataset(features: {'src_texts': Value(dtype='string', id=None), 'tgt_texts': Value(dtype='string', id=None)}, num_rows: 10)
`
I feed it to a dataloader:
```
dataloader = DataLoader(
train_dataset,
batch_size=self.args.train_batch_size,
sampler=train_sampler,
collate_fn=self.data_collator,
drop_last=self.args.dataloader_drop_last,
num_workers=self.args.dataloader_num_workers,
)
```
now if I type len(dataloader) this is 1, which is wrong, and this needs to be 10. could you assist me please? thanks
Also, I cannot first convert it to torch format, since huggingface seq2seq_trainer codes process the datasets afterwards during datacollector function to make it optimize for TPUs. | [
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https://github.com/huggingface/datasets/issues/915 | Shall we change the hashing to encoding to reduce potential replicated cache files? | This is an interesting idea !
Do you have ideas about how to approach the decoding and the normalization ? | Hi there. For now, we are using `xxhash` to hash the transformations to fingerprint and we will save a copy of the processed dataset to disk if there is a new hash value. However, there are some transformations that are idempotent or commutative to each other. I think that encoding the transformation chain as the fingerprint may help in those cases, for example, use `base64.urlsafe_b64encode`. In this way, before we want to save a new copy, we can decode the transformation chain and normalize it to prevent omit potential reuse. As the main targets of this project are the really large datasets that cannot be loaded entirely in memory, I believe it would save a lot of time if we can avoid some write.
If you have interest in this, I'd love to help :). | 20 | Shall we change the hashing to encoding to reduce potential replicated cache files?
Hi there. For now, we are using `xxhash` to hash the transformations to fingerprint and we will save a copy of the processed dataset to disk if there is a new hash value. However, there are some transformations that are idempotent or commutative to each other. I think that encoding the transformation chain as the fingerprint may help in those cases, for example, use `base64.urlsafe_b64encode`. In this way, before we want to save a new copy, we can decode the transformation chain and normalize it to prevent omit potential reuse. As the main targets of this project are the really large datasets that cannot be loaded entirely in memory, I believe it would save a lot of time if we can avoid some write.
If you have interest in this, I'd love to help :).
This is an interesting idea !
Do you have ideas about how to approach the decoding and the normalization ? | [
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https://github.com/huggingface/datasets/issues/915 | Shall we change the hashing to encoding to reduce potential replicated cache files? | @lhoestq
I think we first need to save the transformation chain to a list in `self._fingerprint`. Then we can
- decode all the current saved datasets to see if there is already one that is equivalent to the transformation we need now.
- or, calculate all the possible hash value of the current chain for comparison so that we could continue to use hashing.
If we find one, we can adjust the list in `self._fingerprint` to it.
As for the transformation reordering rules, we can just start with some manual rules, like two sort on the same column should merge to one, filter and select can change orders.
And for encoding and decoding, we can just manually specify `sort` is 0, `shuffling` is 2 and create a base-n number or use some general algorithm like `base64.urlsafe_b64encode`.
Because we are not doing lazy evaluation now, we may not be able to normalize the transformation to its minimal form. If we want to support that, we can provde a `Sequential` api and let user input a list or transformation, so that user would not use the intermediate datasets. This would look like tf.data.Dataset. | Hi there. For now, we are using `xxhash` to hash the transformations to fingerprint and we will save a copy of the processed dataset to disk if there is a new hash value. However, there are some transformations that are idempotent or commutative to each other. I think that encoding the transformation chain as the fingerprint may help in those cases, for example, use `base64.urlsafe_b64encode`. In this way, before we want to save a new copy, we can decode the transformation chain and normalize it to prevent omit potential reuse. As the main targets of this project are the really large datasets that cannot be loaded entirely in memory, I believe it would save a lot of time if we can avoid some write.
If you have interest in this, I'd love to help :). | 191 | Shall we change the hashing to encoding to reduce potential replicated cache files?
Hi there. For now, we are using `xxhash` to hash the transformations to fingerprint and we will save a copy of the processed dataset to disk if there is a new hash value. However, there are some transformations that are idempotent or commutative to each other. I think that encoding the transformation chain as the fingerprint may help in those cases, for example, use `base64.urlsafe_b64encode`. In this way, before we want to save a new copy, we can decode the transformation chain and normalize it to prevent omit potential reuse. As the main targets of this project are the really large datasets that cannot be loaded entirely in memory, I believe it would save a lot of time if we can avoid some write.
If you have interest in this, I'd love to help :).
@lhoestq
I think we first need to save the transformation chain to a list in `self._fingerprint`. Then we can
- decode all the current saved datasets to see if there is already one that is equivalent to the transformation we need now.
- or, calculate all the possible hash value of the current chain for comparison so that we could continue to use hashing.
If we find one, we can adjust the list in `self._fingerprint` to it.
As for the transformation reordering rules, we can just start with some manual rules, like two sort on the same column should merge to one, filter and select can change orders.
And for encoding and decoding, we can just manually specify `sort` is 0, `shuffling` is 2 and create a base-n number or use some general algorithm like `base64.urlsafe_b64encode`.
Because we are not doing lazy evaluation now, we may not be able to normalize the transformation to its minimal form. If we want to support that, we can provde a `Sequential` api and let user input a list or transformation, so that user would not use the intermediate datasets. This would look like tf.data.Dataset. | [
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https://github.com/huggingface/datasets/issues/897 | Dataset viewer issues | Thanks for reporting !
cc @srush for the empty feature list issue and the encoding issue
cc @julien-c maybe we can update the url and just have a redirection from the old url to the new one ? | I was looking through the dataset viewer and I like it a lot. Version numbers, citation information, everything's there! I've spotted a few issues/bugs though:
- the URL is still under `nlp`, perhaps an alias for `datasets` can be made
- when I remove a **feature** (and the feature list is empty), I get an error. This is probably expected, but perhaps a better error message can be shown to the user
```bash
IndexError: list index out of range
Traceback:
File "/home/sasha/streamlit/lib/streamlit/ScriptRunner.py", line 322, in _run_script
exec(code, module.__dict__)
File "/home/sasha/nlp-viewer/run.py", line 316, in <module>
st.table(style)
File "/home/sasha/streamlit/lib/streamlit/DeltaGenerator.py", line 122, in wrapped_method
return dg._enqueue_new_element_delta(marshall_element, delta_type, last_index)
File "/home/sasha/streamlit/lib/streamlit/DeltaGenerator.py", line 367, in _enqueue_new_element_delta
rv = marshall_element(msg.delta.new_element)
File "/home/sasha/streamlit/lib/streamlit/DeltaGenerator.py", line 120, in marshall_element
return method(dg, element, *args, **kwargs)
File "/home/sasha/streamlit/lib/streamlit/DeltaGenerator.py", line 2944, in table
data_frame_proto.marshall_data_frame(data, element.table)
File "/home/sasha/streamlit/lib/streamlit/elements/data_frame_proto.py", line 54, in marshall_data_frame
_marshall_styles(proto_df.style, df, styler)
File "/home/sasha/streamlit/lib/streamlit/elements/data_frame_proto.py", line 73, in _marshall_styles
translated_style = styler._translate()
File "/home/sasha/.local/share/virtualenvs/lib-ogGKnCK_/lib/python3.7/site-packages/pandas/io/formats/style.py", line 351, in _translate
* (len(clabels[0]) - len(hidden_columns))
```
- there seems to be **an encoding issue** in the default view, the dataset examples are shown as raw monospace text, without a decent encoding. That makes it hard to read for languages that use a lot of special characters. Take for instance the [cs-en WMT19 set](https://huggingface.co/nlp/viewer/?dataset=wmt19&config=cs-en). This problem goes away when you enable "List view", because then some syntax highlighteris used, and the special characters are coded correctly.
| 38 | Dataset viewer issues
I was looking through the dataset viewer and I like it a lot. Version numbers, citation information, everything's there! I've spotted a few issues/bugs though:
- the URL is still under `nlp`, perhaps an alias for `datasets` can be made
- when I remove a **feature** (and the feature list is empty), I get an error. This is probably expected, but perhaps a better error message can be shown to the user
```bash
IndexError: list index out of range
Traceback:
File "/home/sasha/streamlit/lib/streamlit/ScriptRunner.py", line 322, in _run_script
exec(code, module.__dict__)
File "/home/sasha/nlp-viewer/run.py", line 316, in <module>
st.table(style)
File "/home/sasha/streamlit/lib/streamlit/DeltaGenerator.py", line 122, in wrapped_method
return dg._enqueue_new_element_delta(marshall_element, delta_type, last_index)
File "/home/sasha/streamlit/lib/streamlit/DeltaGenerator.py", line 367, in _enqueue_new_element_delta
rv = marshall_element(msg.delta.new_element)
File "/home/sasha/streamlit/lib/streamlit/DeltaGenerator.py", line 120, in marshall_element
return method(dg, element, *args, **kwargs)
File "/home/sasha/streamlit/lib/streamlit/DeltaGenerator.py", line 2944, in table
data_frame_proto.marshall_data_frame(data, element.table)
File "/home/sasha/streamlit/lib/streamlit/elements/data_frame_proto.py", line 54, in marshall_data_frame
_marshall_styles(proto_df.style, df, styler)
File "/home/sasha/streamlit/lib/streamlit/elements/data_frame_proto.py", line 73, in _marshall_styles
translated_style = styler._translate()
File "/home/sasha/.local/share/virtualenvs/lib-ogGKnCK_/lib/python3.7/site-packages/pandas/io/formats/style.py", line 351, in _translate
* (len(clabels[0]) - len(hidden_columns))
```
- there seems to be **an encoding issue** in the default view, the dataset examples are shown as raw monospace text, without a decent encoding. That makes it hard to read for languages that use a lot of special characters. Take for instance the [cs-en WMT19 set](https://huggingface.co/nlp/viewer/?dataset=wmt19&config=cs-en). This problem goes away when you enable "List view", because then some syntax highlighteris used, and the special characters are coded correctly.
Thanks for reporting !
cc @srush for the empty feature list issue and the encoding issue
cc @julien-c maybe we can update the url and just have a redirection from the old url to the new one ? | [
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https://github.com/huggingface/datasets/issues/897 | Dataset viewer issues | Ok, I redirected on our side to a new url. ⚠️ @srush: if you update the Streamlit config too to `/datasets/viewer`, let me know because I'll need to change our nginx config at the same time | I was looking through the dataset viewer and I like it a lot. Version numbers, citation information, everything's there! I've spotted a few issues/bugs though:
- the URL is still under `nlp`, perhaps an alias for `datasets` can be made
- when I remove a **feature** (and the feature list is empty), I get an error. This is probably expected, but perhaps a better error message can be shown to the user
```bash
IndexError: list index out of range
Traceback:
File "/home/sasha/streamlit/lib/streamlit/ScriptRunner.py", line 322, in _run_script
exec(code, module.__dict__)
File "/home/sasha/nlp-viewer/run.py", line 316, in <module>
st.table(style)
File "/home/sasha/streamlit/lib/streamlit/DeltaGenerator.py", line 122, in wrapped_method
return dg._enqueue_new_element_delta(marshall_element, delta_type, last_index)
File "/home/sasha/streamlit/lib/streamlit/DeltaGenerator.py", line 367, in _enqueue_new_element_delta
rv = marshall_element(msg.delta.new_element)
File "/home/sasha/streamlit/lib/streamlit/DeltaGenerator.py", line 120, in marshall_element
return method(dg, element, *args, **kwargs)
File "/home/sasha/streamlit/lib/streamlit/DeltaGenerator.py", line 2944, in table
data_frame_proto.marshall_data_frame(data, element.table)
File "/home/sasha/streamlit/lib/streamlit/elements/data_frame_proto.py", line 54, in marshall_data_frame
_marshall_styles(proto_df.style, df, styler)
File "/home/sasha/streamlit/lib/streamlit/elements/data_frame_proto.py", line 73, in _marshall_styles
translated_style = styler._translate()
File "/home/sasha/.local/share/virtualenvs/lib-ogGKnCK_/lib/python3.7/site-packages/pandas/io/formats/style.py", line 351, in _translate
* (len(clabels[0]) - len(hidden_columns))
```
- there seems to be **an encoding issue** in the default view, the dataset examples are shown as raw monospace text, without a decent encoding. That makes it hard to read for languages that use a lot of special characters. Take for instance the [cs-en WMT19 set](https://huggingface.co/nlp/viewer/?dataset=wmt19&config=cs-en). This problem goes away when you enable "List view", because then some syntax highlighteris used, and the special characters are coded correctly.
| 36 | Dataset viewer issues
I was looking through the dataset viewer and I like it a lot. Version numbers, citation information, everything's there! I've spotted a few issues/bugs though:
- the URL is still under `nlp`, perhaps an alias for `datasets` can be made
- when I remove a **feature** (and the feature list is empty), I get an error. This is probably expected, but perhaps a better error message can be shown to the user
```bash
IndexError: list index out of range
Traceback:
File "/home/sasha/streamlit/lib/streamlit/ScriptRunner.py", line 322, in _run_script
exec(code, module.__dict__)
File "/home/sasha/nlp-viewer/run.py", line 316, in <module>
st.table(style)
File "/home/sasha/streamlit/lib/streamlit/DeltaGenerator.py", line 122, in wrapped_method
return dg._enqueue_new_element_delta(marshall_element, delta_type, last_index)
File "/home/sasha/streamlit/lib/streamlit/DeltaGenerator.py", line 367, in _enqueue_new_element_delta
rv = marshall_element(msg.delta.new_element)
File "/home/sasha/streamlit/lib/streamlit/DeltaGenerator.py", line 120, in marshall_element
return method(dg, element, *args, **kwargs)
File "/home/sasha/streamlit/lib/streamlit/DeltaGenerator.py", line 2944, in table
data_frame_proto.marshall_data_frame(data, element.table)
File "/home/sasha/streamlit/lib/streamlit/elements/data_frame_proto.py", line 54, in marshall_data_frame
_marshall_styles(proto_df.style, df, styler)
File "/home/sasha/streamlit/lib/streamlit/elements/data_frame_proto.py", line 73, in _marshall_styles
translated_style = styler._translate()
File "/home/sasha/.local/share/virtualenvs/lib-ogGKnCK_/lib/python3.7/site-packages/pandas/io/formats/style.py", line 351, in _translate
* (len(clabels[0]) - len(hidden_columns))
```
- there seems to be **an encoding issue** in the default view, the dataset examples are shown as raw monospace text, without a decent encoding. That makes it hard to read for languages that use a lot of special characters. Take for instance the [cs-en WMT19 set](https://huggingface.co/nlp/viewer/?dataset=wmt19&config=cs-en). This problem goes away when you enable "List view", because then some syntax highlighteris used, and the special characters are coded correctly.
Ok, I redirected on our side to a new url. ⚠️ @srush: if you update the Streamlit config too to `/datasets/viewer`, let me know because I'll need to change our nginx config at the same time | [
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] |
https://github.com/huggingface/datasets/issues/888 | Nested lists are zipped unexpectedly | Yes following the Tensorflow Datasets convention, objects with type `Sequence of a Dict` are actually stored as a `dictionary of lists`.
See the [documentation](https://huggingface.co/docs/datasets/features.html?highlight=features) for more details | I might misunderstand something, but I expect that if I define:
```python
"top": datasets.features.Sequence({
"middle": datasets.features.Sequence({
"bottom": datasets.Value("int32")
})
})
```
And I then create an example:
```python
yield 1, {
"top": [{
"middle": [
{"bottom": 1},
{"bottom": 2}
]
}]
}
```
I then load my dataset:
```python
train = load_dataset("my dataset")["train"]
```
and expect to be able to access `data[0]["top"][0]["middle"][0]`.
That is not the case. Here is `data[0]` as JSON:
```json
{"top": {"middle": [{"bottom": [1, 2]}]}}
```
Clearly different than the thing I inputted.
```json
{"top": [{"middle": [{"bottom": 1},{"bottom": 2}]}]}
``` | 27 | Nested lists are zipped unexpectedly
I might misunderstand something, but I expect that if I define:
```python
"top": datasets.features.Sequence({
"middle": datasets.features.Sequence({
"bottom": datasets.Value("int32")
})
})
```
And I then create an example:
```python
yield 1, {
"top": [{
"middle": [
{"bottom": 1},
{"bottom": 2}
]
}]
}
```
I then load my dataset:
```python
train = load_dataset("my dataset")["train"]
```
and expect to be able to access `data[0]["top"][0]["middle"][0]`.
That is not the case. Here is `data[0]` as JSON:
```json
{"top": {"middle": [{"bottom": [1, 2]}]}}
```
Clearly different than the thing I inputted.
```json
{"top": [{"middle": [{"bottom": 1},{"bottom": 2}]}]}
```
Yes following the Tensorflow Datasets convention, objects with type `Sequence of a Dict` are actually stored as a `dictionary of lists`.
See the [documentation](https://huggingface.co/docs/datasets/features.html?highlight=features) for more details | [
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] |
https://github.com/huggingface/datasets/issues/888 | Nested lists are zipped unexpectedly | Thanks.
This is a bit (very) confusing, but I guess if its intended, I'll just work with it as if its how my data was originally structured :)
| I might misunderstand something, but I expect that if I define:
```python
"top": datasets.features.Sequence({
"middle": datasets.features.Sequence({
"bottom": datasets.Value("int32")
})
})
```
And I then create an example:
```python
yield 1, {
"top": [{
"middle": [
{"bottom": 1},
{"bottom": 2}
]
}]
}
```
I then load my dataset:
```python
train = load_dataset("my dataset")["train"]
```
and expect to be able to access `data[0]["top"][0]["middle"][0]`.
That is not the case. Here is `data[0]` as JSON:
```json
{"top": {"middle": [{"bottom": [1, 2]}]}}
```
Clearly different than the thing I inputted.
```json
{"top": [{"middle": [{"bottom": 1},{"bottom": 2}]}]}
``` | 28 | Nested lists are zipped unexpectedly
I might misunderstand something, but I expect that if I define:
```python
"top": datasets.features.Sequence({
"middle": datasets.features.Sequence({
"bottom": datasets.Value("int32")
})
})
```
And I then create an example:
```python
yield 1, {
"top": [{
"middle": [
{"bottom": 1},
{"bottom": 2}
]
}]
}
```
I then load my dataset:
```python
train = load_dataset("my dataset")["train"]
```
and expect to be able to access `data[0]["top"][0]["middle"][0]`.
That is not the case. Here is `data[0]` as JSON:
```json
{"top": {"middle": [{"bottom": [1, 2]}]}}
```
Clearly different than the thing I inputted.
```json
{"top": [{"middle": [{"bottom": 1},{"bottom": 2}]}]}
```
Thanks.
This is a bit (very) confusing, but I guess if its intended, I'll just work with it as if its how my data was originally structured :)
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https://github.com/huggingface/datasets/issues/887 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | Yes right now `ArrayXD` can only be used as a column feature type, not a subtype.
With the current Arrow limitations I don't think we'll be able to make it work as a subtype, however it should be possible to allow dimensions of dynamic sizes (`Array3D(shape=(None, 137, 2), dtype="float32")` for example since the [underlying arrow type](https://github.com/huggingface/datasets/blob/master/src/datasets/features.py#L236) allows dynamic sizes.
For now I'd suggest the use of nested `Sequence` types. Once we have the dynamic sizes you can update the dataset.
What do you think ? | I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | 85 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
Yes right now `ArrayXD` can only be used as a column feature type, not a subtype.
With the current Arrow limitations I don't think we'll be able to make it work as a subtype, however it should be possible to allow dimensions of dynamic sizes (`Array3D(shape=(None, 137, 2), dtype="float32")` for example since the [underlying arrow type](https://github.com/huggingface/datasets/blob/master/src/datasets/features.py#L236) allows dynamic sizes.
For now I'd suggest the use of nested `Sequence` types. Once we have the dynamic sizes you can update the dataset.
What do you think ? | [
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https://github.com/huggingface/datasets/issues/887 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | > Yes right now ArrayXD can only be used as a column feature type, not a subtype.
Meaning it can't be nested under `Sequence`?
If so, for now I'll just make it a python list and make it with the nested `Sequence` type you suggested. | I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | 45 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
> Yes right now ArrayXD can only be used as a column feature type, not a subtype.
Meaning it can't be nested under `Sequence`?
If so, for now I'll just make it a python list and make it with the nested `Sequence` type you suggested. | [
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https://github.com/huggingface/datasets/issues/887 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | Yea unfortunately..
That's a current limitation with Arrow ExtensionTypes that can't be used in the default Arrow Array objects.
We already have an ExtensionArray that allows us to use them as column types but not for subtypes.
Maybe we can extend it, I haven't experimented with that yet | I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | 48 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
Yea unfortunately..
That's a current limitation with Arrow ExtensionTypes that can't be used in the default Arrow Array objects.
We already have an ExtensionArray that allows us to use them as column types but not for subtypes.
Maybe we can extend it, I haven't experimented with that yet | [
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https://github.com/huggingface/datasets/issues/887 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | Cool
So please consider this issue as a feature request for:
```
Array3D(shape=(None, 137, 2), dtype="float32")
```
its a way to represent videos, poses, and other cool sequences | I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | 28 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
Cool
So please consider this issue as a feature request for:
```
Array3D(shape=(None, 137, 2), dtype="float32")
```
its a way to represent videos, poses, and other cool sequences | [
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] |
https://github.com/huggingface/datasets/issues/887 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | @lhoestq well, so sequence of sequences doesn't work either...
```
pyarrow.lib.ArrowCapacityError: List array cannot contain more than 2147483646 child elements, have 2147483648
```
| I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | 23 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
@lhoestq well, so sequence of sequences doesn't work either...
```
pyarrow.lib.ArrowCapacityError: List array cannot contain more than 2147483646 child elements, have 2147483648
```
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https://github.com/huggingface/datasets/issues/887 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | Working with Arrow can be quite fun sometimes.
You can fix this issue by trying to reduce the writer batch size (same trick than the one used to reduce the RAM usage in https://github.com/huggingface/datasets/issues/741).
Let me know if it works.
I haven't investigated yet on https://github.com/huggingface/datasets/issues/741 since I was preparing this week's sprint to add datasets but this is in my priority list for early next week. | I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | 67 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
Working with Arrow can be quite fun sometimes.
You can fix this issue by trying to reduce the writer batch size (same trick than the one used to reduce the RAM usage in https://github.com/huggingface/datasets/issues/741).
Let me know if it works.
I haven't investigated yet on https://github.com/huggingface/datasets/issues/741 since I was preparing this week's sprint to add datasets but this is in my priority list for early next week. | [
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https://github.com/huggingface/datasets/issues/887 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | The batch size fix doesn't work... not for #741 and not for this dataset I'm trying (DGS corpus)
Loading the DGS corpus takes 400GB of RAM, which is fine with me as my machine is large enough
| I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | 37 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
The batch size fix doesn't work... not for #741 and not for this dataset I'm trying (DGS corpus)
Loading the DGS corpus takes 400GB of RAM, which is fine with me as my machine is large enough
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] |
https://github.com/huggingface/datasets/issues/887 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | Not yet, I've been pretty busy with the dataset sprint lately but this is something that's been asked several times already. So I'll definitely work on this as soon as I'm done with the sprint and with the RAM issue you reported. | I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | 42 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
Not yet, I've been pretty busy with the dataset sprint lately but this is something that's been asked several times already. So I'll definitely work on this as soon as I'm done with the sprint and with the RAM issue you reported. | [
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https://github.com/huggingface/datasets/issues/887 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | Hi @lhoestq,
Any chance you have some updates on the supporting `ArrayXD` as a subtype or support of dynamic sized arrays?
e.g.:
`datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))`
`Array3D(shape=(None, 137, 2), dtype="float32")` | I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | 29 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
Hi @lhoestq,
Any chance you have some updates on the supporting `ArrayXD` as a subtype or support of dynamic sized arrays?
e.g.:
`datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))`
`Array3D(shape=(None, 137, 2), dtype="float32")` | [
-0.208444491,
0.003985228,
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] |
https://github.com/huggingface/datasets/issues/887 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | Hi ! We haven't worked in this lately and it's not in our very short-term roadmap since it requires a bit a work to make it work with arrow. Though this will definitely be added at one point. | I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | 38 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
Hi ! We haven't worked in this lately and it's not in our very short-term roadmap since it requires a bit a work to make it work with arrow. Though this will definitely be added at one point. | [
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https://github.com/huggingface/datasets/issues/887 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | @lhoestq, thanks for the update.
I actually tried to modify some piece of code to make it work. Can you please tell if I missing anything here?
I think that for vast majority of cases it's enough to make first dimension of the array dynamic i.e. `shape=(None, 100, 100)`. For that, it's enough to modify class [ArrayExtensionArray](https://github.com/huggingface/datasets/blob/9ca24250ea44e7611c4dabd01ecf9415a7f0be6c/src/datasets/features.py#L397) to output list of arrays of different sizes instead of list of arrays of same sizes (current version)
Below are my modifications of this class.
```
class ArrayExtensionArray(pa.ExtensionArray):
def __array__(self):
zero_copy_only = _is_zero_copy_only(self.storage.type)
return self.to_numpy(zero_copy_only=zero_copy_only)
def __getitem__(self, i):
return self.storage[i]
def to_numpy(self, zero_copy_only=True):
storage: pa.ListArray = self.storage
size = 1
for i in range(self.type.ndims):
size *= self.type.shape[i]
storage = storage.flatten()
numpy_arr = storage.to_numpy(zero_copy_only=zero_copy_only)
numpy_arr = numpy_arr.reshape(len(self), *self.type.shape)
return numpy_arr
def to_list_of_numpy(self, zero_copy_only=True):
storage: pa.ListArray = self.storage
shape = self.type.shape
arrays = []
for dim in range(1, self.type.ndims):
assert shape[dim] is not None, f"Support only dynamic size on first dimension. Got: {shape}"
first_dim_offsets = np.array([off.as_py() for off in storage.offsets])
for i in range(len(storage)):
storage_el = storage[i:i+1]
first_dim = first_dim_offsets[i+1] - first_dim_offsets[i]
# flatten storage
for dim in range(self.type.ndims):
storage_el = storage_el.flatten()
numpy_arr = storage_el.to_numpy(zero_copy_only=zero_copy_only)
arrays.append(numpy_arr.reshape(first_dim, *shape[1:]))
return arrays
def to_pylist(self):
zero_copy_only = _is_zero_copy_only(self.storage.type)
if self.type.shape[0] is None:
return self.to_list_of_numpy(zero_copy_only=zero_copy_only)
else:
return self.to_numpy(zero_copy_only=zero_copy_only).tolist()
```
I ran few tests and it works as expected. Let me know what you think. | I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | 224 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
@lhoestq, thanks for the update.
I actually tried to modify some piece of code to make it work. Can you please tell if I missing anything here?
I think that for vast majority of cases it's enough to make first dimension of the array dynamic i.e. `shape=(None, 100, 100)`. For that, it's enough to modify class [ArrayExtensionArray](https://github.com/huggingface/datasets/blob/9ca24250ea44e7611c4dabd01ecf9415a7f0be6c/src/datasets/features.py#L397) to output list of arrays of different sizes instead of list of arrays of same sizes (current version)
Below are my modifications of this class.
```
class ArrayExtensionArray(pa.ExtensionArray):
def __array__(self):
zero_copy_only = _is_zero_copy_only(self.storage.type)
return self.to_numpy(zero_copy_only=zero_copy_only)
def __getitem__(self, i):
return self.storage[i]
def to_numpy(self, zero_copy_only=True):
storage: pa.ListArray = self.storage
size = 1
for i in range(self.type.ndims):
size *= self.type.shape[i]
storage = storage.flatten()
numpy_arr = storage.to_numpy(zero_copy_only=zero_copy_only)
numpy_arr = numpy_arr.reshape(len(self), *self.type.shape)
return numpy_arr
def to_list_of_numpy(self, zero_copy_only=True):
storage: pa.ListArray = self.storage
shape = self.type.shape
arrays = []
for dim in range(1, self.type.ndims):
assert shape[dim] is not None, f"Support only dynamic size on first dimension. Got: {shape}"
first_dim_offsets = np.array([off.as_py() for off in storage.offsets])
for i in range(len(storage)):
storage_el = storage[i:i+1]
first_dim = first_dim_offsets[i+1] - first_dim_offsets[i]
# flatten storage
for dim in range(self.type.ndims):
storage_el = storage_el.flatten()
numpy_arr = storage_el.to_numpy(zero_copy_only=zero_copy_only)
arrays.append(numpy_arr.reshape(first_dim, *shape[1:]))
return arrays
def to_pylist(self):
zero_copy_only = _is_zero_copy_only(self.storage.type)
if self.type.shape[0] is None:
return self.to_list_of_numpy(zero_copy_only=zero_copy_only)
else:
return self.to_numpy(zero_copy_only=zero_copy_only).tolist()
```
I ran few tests and it works as expected. Let me know what you think. | [
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https://github.com/huggingface/datasets/issues/887 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | Thanks for diving into this !
Indeed focusing on making the first dimensions dynamic make total sense (and users could still re-order their dimensions to match this constraint).
Your code looks great :) I think it can even be extended to support several dynamic dimensions if we want to.
Feel free to open a PR to include these changes, then we can update our test suite to make sure it works in all use cases.
In particular I think we might need a few tweaks to allow it to be converted to pandas (though I haven't tested yet):
```python
from datasets import Dataset, Features, Array3D
# this works
matrix = [[1, 0], [0, 1]]
features = Features({"a": Array3D(dtype="int32", shape=(1, 2, 2))})
d = Dataset.from_dict({"a": [[matrix], [matrix]]})
print(d.to_pandas())
# this should work as well
matrix = [[1, 0], [0, 1]]
features = Features({"a": Array3D(dtype="int32", shape=(None, 2, 2))})
d = Dataset.from_dict({"a": [[matrix], [matrix] * 2]})
print(d.to_pandas())
```
I'll be happy to help you on this :) | I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type> | 164 | pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
I set up a new dataset, with a sequence of arrays (really, I want to have an array of (None, 137, 2), and the first dimension is dynamic)
```python
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
# This defines the different columns of the dataset and their types
features=datasets.Features(
{
"pose": datasets.features.Sequence(datasets.features.Array2D(shape=(137, 2), dtype="float32"))
}
),
homepage=_HOMEPAGE,
citation=_CITATION,
)
def _generate_examples(self):
""" Yields examples. """
yield 1, {
"pose": [np.zeros(shape=(137, 2), dtype=np.float32)]
}
```
But this doesn't work -
> pyarrow.lib.ArrowNotImplementedError: MakeBuilder: cannot construct builder for type extension<arrow.py_extension_type>
Thanks for diving into this !
Indeed focusing on making the first dimensions dynamic make total sense (and users could still re-order their dimensions to match this constraint).
Your code looks great :) I think it can even be extended to support several dynamic dimensions if we want to.
Feel free to open a PR to include these changes, then we can update our test suite to make sure it works in all use cases.
In particular I think we might need a few tweaks to allow it to be converted to pandas (though I haven't tested yet):
```python
from datasets import Dataset, Features, Array3D
# this works
matrix = [[1, 0], [0, 1]]
features = Features({"a": Array3D(dtype="int32", shape=(1, 2, 2))})
d = Dataset.from_dict({"a": [[matrix], [matrix]]})
print(d.to_pandas())
# this should work as well
matrix = [[1, 0], [0, 1]]
features = Features({"a": Array3D(dtype="int32", shape=(None, 2, 2))})
d = Dataset.from_dict({"a": [[matrix], [matrix] * 2]})
print(d.to_pandas())
```
I'll be happy to help you on this :) | [
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https://github.com/huggingface/datasets/issues/883 | Downloading/caching only a part of a datasets' dataset. | I think it would be a very helpful feature, because sometimes one only wants to evaluate models on the dev set, and the whole training data may be many times bigger.
This makes the task impossible with limited memory resources. | Hi,
I want to use the validation data *only* (of natural question).
I don't want to have the whole dataset cached in my machine, just the dev set.
Is this possible? I can't find a way to do it in the docs.
Thank you,
Sapir | 40 | Downloading/caching only a part of a datasets' dataset.
Hi,
I want to use the validation data *only* (of natural question).
I don't want to have the whole dataset cached in my machine, just the dev set.
Is this possible? I can't find a way to do it in the docs.
Thank you,
Sapir
I think it would be a very helpful feature, because sometimes one only wants to evaluate models on the dev set, and the whole training data may be many times bigger.
This makes the task impossible with limited memory resources. | [
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https://github.com/huggingface/datasets/issues/880 | Add SQA | I’ll take this one to test the workflow for the sprint next week cc @yjernite @lhoestq | ## Adding a Dataset
- **Name:** SQA (Sequential Question Answering) by Microsoft.
- **Description:** The SQA dataset was created to explore the task of answering sequences of inter-related questions on HTML tables. It has 6,066 sequences with 17,553 questions in total.
- **Paper:** https://www.microsoft.com/en-us/research/publication/search-based-neural-structured-learning-sequential-question-answering/
- **Data:** https://www.microsoft.com/en-us/download/details.aspx?id=54253
- **Motivation:** currently, the [Tapas](https://ai.googleblog.com/2020/04/using-neural-networks-to-find-answers.html) algorithm by Google AI is being added to the Transformers library (see https://github.com/huggingface/transformers/pull/8113). It would be great to use that model in combination with this dataset, on which it achieves SOTA results (average question accuracy of 0.71).
Note 1: this dataset actually consists of 2 types of files:
1) TSV files, containing the questions, answer coordinates and answer texts (for training, dev and test)
2) a folder of csv files, which contain the actual tabular data
Note 2: if you download the dataset straight from the download link above, then you will see that the `answer_coordinates` and `answer_text` columns are string lists of string tuples and strings respectively, which is not ideal. It would be better to make them true Python lists of tuples and strings respectively (using `ast.literal_eval`), before uploading them to the HuggingFace hub.
Adding this would be great! Then we could possibly also add [WTQ (WikiTable Questions)](https://github.com/ppasupat/WikiTableQuestions) and [TabFact (Tabular Fact Checking)](https://github.com/wenhuchen/Table-Fact-Checking) on which TAPAS also achieves state-of-the-art results. Note that the TAPAS algorithm requires these datasets to first be converted into the SQA format.
Instructions to add a new dataset can be found [here](https://huggingface.co/docs/datasets/share_dataset.html).
| 16 | Add SQA
## Adding a Dataset
- **Name:** SQA (Sequential Question Answering) by Microsoft.
- **Description:** The SQA dataset was created to explore the task of answering sequences of inter-related questions on HTML tables. It has 6,066 sequences with 17,553 questions in total.
- **Paper:** https://www.microsoft.com/en-us/research/publication/search-based-neural-structured-learning-sequential-question-answering/
- **Data:** https://www.microsoft.com/en-us/download/details.aspx?id=54253
- **Motivation:** currently, the [Tapas](https://ai.googleblog.com/2020/04/using-neural-networks-to-find-answers.html) algorithm by Google AI is being added to the Transformers library (see https://github.com/huggingface/transformers/pull/8113). It would be great to use that model in combination with this dataset, on which it achieves SOTA results (average question accuracy of 0.71).
Note 1: this dataset actually consists of 2 types of files:
1) TSV files, containing the questions, answer coordinates and answer texts (for training, dev and test)
2) a folder of csv files, which contain the actual tabular data
Note 2: if you download the dataset straight from the download link above, then you will see that the `answer_coordinates` and `answer_text` columns are string lists of string tuples and strings respectively, which is not ideal. It would be better to make them true Python lists of tuples and strings respectively (using `ast.literal_eval`), before uploading them to the HuggingFace hub.
Adding this would be great! Then we could possibly also add [WTQ (WikiTable Questions)](https://github.com/ppasupat/WikiTableQuestions) and [TabFact (Tabular Fact Checking)](https://github.com/wenhuchen/Table-Fact-Checking) on which TAPAS also achieves state-of-the-art results. Note that the TAPAS algorithm requires these datasets to first be converted into the SQA format.
Instructions to add a new dataset can be found [here](https://huggingface.co/docs/datasets/share_dataset.html).
I’ll take this one to test the workflow for the sprint next week cc @yjernite @lhoestq | [
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https://github.com/huggingface/datasets/issues/880 | Add SQA | @thomwolf here's a slightly adapted version of the code from the [official Tapas repository](https://github.com/google-research/tapas/blob/master/tapas/utils/interaction_utils.py) that is used to turn the `answer_coordinates` and `answer_texts` columns into true Python lists of tuples/strings:
```
import pandas as pd
import ast
data = pd.read_csv("/content/sqa_data/random-split-1-dev.tsv", sep='\t')
def _parse_answer_coordinates(answer_coordinate_str):
"""Parses the answer_coordinates of a question.
Args:
answer_coordinate_str: A string representation of a Python list of tuple
strings.
For example: "['(1, 4)','(1, 3)', ...]"
"""
try:
answer_coordinates = []
# make a list of strings
coords = ast.literal_eval(answer_coordinate_str)
# parse each string as a tuple
for row_index, column_index in sorted(
ast.literal_eval(coord) for coord in coords):
answer_coordinates.append((row_index, column_index))
except SyntaxError:
raise ValueError('Unable to evaluate %s' % answer_coordinate_str)
return answer_coordinates
def _parse_answer_text(answer_text):
"""Populates the answer_texts field of `answer` by parsing `answer_text`.
Args:
answer_text: A string representation of a Python list of strings.
For example: "[u'test', u'hello', ...]"
"""
try:
answer = []
for value in ast.literal_eval(answer_text):
answer.append(value)
except SyntaxError:
raise ValueError('Unable to evaluate %s' % answer_text)
return answer
data['answer_coordinates'] = data['answer_coordinates'].apply(lambda coords_str: _parse_answer_coordinates(coords_str))
data['answer_text'] = data['answer_text'].apply(lambda txt: _parse_answer_text(txt))
```
Here I'm using Pandas to read in one of the TSV files (the dev set).
| ## Adding a Dataset
- **Name:** SQA (Sequential Question Answering) by Microsoft.
- **Description:** The SQA dataset was created to explore the task of answering sequences of inter-related questions on HTML tables. It has 6,066 sequences with 17,553 questions in total.
- **Paper:** https://www.microsoft.com/en-us/research/publication/search-based-neural-structured-learning-sequential-question-answering/
- **Data:** https://www.microsoft.com/en-us/download/details.aspx?id=54253
- **Motivation:** currently, the [Tapas](https://ai.googleblog.com/2020/04/using-neural-networks-to-find-answers.html) algorithm by Google AI is being added to the Transformers library (see https://github.com/huggingface/transformers/pull/8113). It would be great to use that model in combination with this dataset, on which it achieves SOTA results (average question accuracy of 0.71).
Note 1: this dataset actually consists of 2 types of files:
1) TSV files, containing the questions, answer coordinates and answer texts (for training, dev and test)
2) a folder of csv files, which contain the actual tabular data
Note 2: if you download the dataset straight from the download link above, then you will see that the `answer_coordinates` and `answer_text` columns are string lists of string tuples and strings respectively, which is not ideal. It would be better to make them true Python lists of tuples and strings respectively (using `ast.literal_eval`), before uploading them to the HuggingFace hub.
Adding this would be great! Then we could possibly also add [WTQ (WikiTable Questions)](https://github.com/ppasupat/WikiTableQuestions) and [TabFact (Tabular Fact Checking)](https://github.com/wenhuchen/Table-Fact-Checking) on which TAPAS also achieves state-of-the-art results. Note that the TAPAS algorithm requires these datasets to first be converted into the SQA format.
Instructions to add a new dataset can be found [here](https://huggingface.co/docs/datasets/share_dataset.html).
| 185 | Add SQA
## Adding a Dataset
- **Name:** SQA (Sequential Question Answering) by Microsoft.
- **Description:** The SQA dataset was created to explore the task of answering sequences of inter-related questions on HTML tables. It has 6,066 sequences with 17,553 questions in total.
- **Paper:** https://www.microsoft.com/en-us/research/publication/search-based-neural-structured-learning-sequential-question-answering/
- **Data:** https://www.microsoft.com/en-us/download/details.aspx?id=54253
- **Motivation:** currently, the [Tapas](https://ai.googleblog.com/2020/04/using-neural-networks-to-find-answers.html) algorithm by Google AI is being added to the Transformers library (see https://github.com/huggingface/transformers/pull/8113). It would be great to use that model in combination with this dataset, on which it achieves SOTA results (average question accuracy of 0.71).
Note 1: this dataset actually consists of 2 types of files:
1) TSV files, containing the questions, answer coordinates and answer texts (for training, dev and test)
2) a folder of csv files, which contain the actual tabular data
Note 2: if you download the dataset straight from the download link above, then you will see that the `answer_coordinates` and `answer_text` columns are string lists of string tuples and strings respectively, which is not ideal. It would be better to make them true Python lists of tuples and strings respectively (using `ast.literal_eval`), before uploading them to the HuggingFace hub.
Adding this would be great! Then we could possibly also add [WTQ (WikiTable Questions)](https://github.com/ppasupat/WikiTableQuestions) and [TabFact (Tabular Fact Checking)](https://github.com/wenhuchen/Table-Fact-Checking) on which TAPAS also achieves state-of-the-art results. Note that the TAPAS algorithm requires these datasets to first be converted into the SQA format.
Instructions to add a new dataset can be found [here](https://huggingface.co/docs/datasets/share_dataset.html).
@thomwolf here's a slightly adapted version of the code from the [official Tapas repository](https://github.com/google-research/tapas/blob/master/tapas/utils/interaction_utils.py) that is used to turn the `answer_coordinates` and `answer_texts` columns into true Python lists of tuples/strings:
```
import pandas as pd
import ast
data = pd.read_csv("/content/sqa_data/random-split-1-dev.tsv", sep='\t')
def _parse_answer_coordinates(answer_coordinate_str):
"""Parses the answer_coordinates of a question.
Args:
answer_coordinate_str: A string representation of a Python list of tuple
strings.
For example: "['(1, 4)','(1, 3)', ...]"
"""
try:
answer_coordinates = []
# make a list of strings
coords = ast.literal_eval(answer_coordinate_str)
# parse each string as a tuple
for row_index, column_index in sorted(
ast.literal_eval(coord) for coord in coords):
answer_coordinates.append((row_index, column_index))
except SyntaxError:
raise ValueError('Unable to evaluate %s' % answer_coordinate_str)
return answer_coordinates
def _parse_answer_text(answer_text):
"""Populates the answer_texts field of `answer` by parsing `answer_text`.
Args:
answer_text: A string representation of a Python list of strings.
For example: "[u'test', u'hello', ...]"
"""
try:
answer = []
for value in ast.literal_eval(answer_text):
answer.append(value)
except SyntaxError:
raise ValueError('Unable to evaluate %s' % answer_text)
return answer
data['answer_coordinates'] = data['answer_coordinates'].apply(lambda coords_str: _parse_answer_coordinates(coords_str))
data['answer_text'] = data['answer_text'].apply(lambda txt: _parse_answer_text(txt))
```
Here I'm using Pandas to read in one of the TSV files (the dev set).
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https://github.com/huggingface/datasets/issues/879 | boolq does not load | Hi ! It runs on my side without issues. I tried
```python
from datasets import load_dataset
load_dataset("boolq")
```
What version of datasets and tensorflow are your runnning ?
Also if you manage to get a minimal reproducible script (on google colab for example) that would be useful. | Hi
I am getting these errors trying to load boolq thanks
Traceback (most recent call last):
File "test.py", line 5, in <module>
data = AutoTask().get("boolq").get_dataset("train", n_obs=10)
File "/remote/idiap.svm/user.active/rkarimi/dev/internship/seq2seq/tasks/tasks.py", line 42, in get_dataset
dataset = self.load_dataset(split=split)
File "/remote/idiap.svm/user.active/rkarimi/dev/internship/seq2seq/tasks/tasks.py", line 38, in load_dataset
return datasets.load_dataset(self.task.name, split=split)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 531, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File " /idiap/home/rkarimi/.cache/huggingface/modules/datasets_modules/datasets/boolq/2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11/boolq.py", line 74, in _split_generators
downloaded_files = dl_manager.download_custom(urls_to_download, tf.io.gfile.copy)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/download_manager.py", line 150, in download_custom
get_from_cache(url, cache_dir=cache_dir, local_files_only=True, use_etag=False)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/file_utils.py", line 472, in get_from_cache
f"Cannot find the requested files in the cached path at {cache_path} and outgoing traffic has been"
FileNotFoundError: Cannot find the requested files in the cached path at /idiap/home/rkarimi/.cache/huggingface/datasets/eaee069e38f6ceaa84de02ad088c34e63ec97671f2cd1910ddb16b10dc60808c and outgoing traffic has been disabled. To enable file online look-ups, set 'local_files_only' to False.
| 47 | boolq does not load
Hi
I am getting these errors trying to load boolq thanks
Traceback (most recent call last):
File "test.py", line 5, in <module>
data = AutoTask().get("boolq").get_dataset("train", n_obs=10)
File "/remote/idiap.svm/user.active/rkarimi/dev/internship/seq2seq/tasks/tasks.py", line 42, in get_dataset
dataset = self.load_dataset(split=split)
File "/remote/idiap.svm/user.active/rkarimi/dev/internship/seq2seq/tasks/tasks.py", line 38, in load_dataset
return datasets.load_dataset(self.task.name, split=split)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 531, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File " /idiap/home/rkarimi/.cache/huggingface/modules/datasets_modules/datasets/boolq/2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11/boolq.py", line 74, in _split_generators
downloaded_files = dl_manager.download_custom(urls_to_download, tf.io.gfile.copy)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/download_manager.py", line 150, in download_custom
get_from_cache(url, cache_dir=cache_dir, local_files_only=True, use_etag=False)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/file_utils.py", line 472, in get_from_cache
f"Cannot find the requested files in the cached path at {cache_path} and outgoing traffic has been"
FileNotFoundError: Cannot find the requested files in the cached path at /idiap/home/rkarimi/.cache/huggingface/datasets/eaee069e38f6ceaa84de02ad088c34e63ec97671f2cd1910ddb16b10dc60808c and outgoing traffic has been disabled. To enable file online look-ups, set 'local_files_only' to False.
Hi ! It runs on my side without issues. I tried
```python
from datasets import load_dataset
load_dataset("boolq")
```
What version of datasets and tensorflow are your runnning ?
Also if you manage to get a minimal reproducible script (on google colab for example) that would be useful. | [
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] |
https://github.com/huggingface/datasets/issues/879 | boolq does not load | hey
i do the exact same commands. for me it fails i guess might be issues with
caching maybe?
thanks
best
rabeeh
On Tue, Nov 24, 2020, 10:24 AM Quentin Lhoest <[email protected]>
wrote:
> Hi ! It runs on my side without issues. I tried
>
> from datasets import load_datasetload_dataset("boolq")
>
> What version of datasets and tensorflow are your runnning ?
> Also if you manage to get a minimal reproducible script (on google colab
> for example) that would be useful.
>
> —
> You are receiving this because you authored the thread.
> Reply to this email directly, view it on GitHub
> <https://github.com/huggingface/datasets/issues/879#issuecomment-732769114>,
> or unsubscribe
> <https://github.com/notifications/unsubscribe-auth/ABP4ZCGGDR2FUMRKZTIY5CTSRN3VXANCNFSM4T7R3U6A>
> .
>
| Hi
I am getting these errors trying to load boolq thanks
Traceback (most recent call last):
File "test.py", line 5, in <module>
data = AutoTask().get("boolq").get_dataset("train", n_obs=10)
File "/remote/idiap.svm/user.active/rkarimi/dev/internship/seq2seq/tasks/tasks.py", line 42, in get_dataset
dataset = self.load_dataset(split=split)
File "/remote/idiap.svm/user.active/rkarimi/dev/internship/seq2seq/tasks/tasks.py", line 38, in load_dataset
return datasets.load_dataset(self.task.name, split=split)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 531, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File " /idiap/home/rkarimi/.cache/huggingface/modules/datasets_modules/datasets/boolq/2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11/boolq.py", line 74, in _split_generators
downloaded_files = dl_manager.download_custom(urls_to_download, tf.io.gfile.copy)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/download_manager.py", line 150, in download_custom
get_from_cache(url, cache_dir=cache_dir, local_files_only=True, use_etag=False)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/file_utils.py", line 472, in get_from_cache
f"Cannot find the requested files in the cached path at {cache_path} and outgoing traffic has been"
FileNotFoundError: Cannot find the requested files in the cached path at /idiap/home/rkarimi/.cache/huggingface/datasets/eaee069e38f6ceaa84de02ad088c34e63ec97671f2cd1910ddb16b10dc60808c and outgoing traffic has been disabled. To enable file online look-ups, set 'local_files_only' to False.
| 117 | boolq does not load
Hi
I am getting these errors trying to load boolq thanks
Traceback (most recent call last):
File "test.py", line 5, in <module>
data = AutoTask().get("boolq").get_dataset("train", n_obs=10)
File "/remote/idiap.svm/user.active/rkarimi/dev/internship/seq2seq/tasks/tasks.py", line 42, in get_dataset
dataset = self.load_dataset(split=split)
File "/remote/idiap.svm/user.active/rkarimi/dev/internship/seq2seq/tasks/tasks.py", line 38, in load_dataset
return datasets.load_dataset(self.task.name, split=split)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 531, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File " /idiap/home/rkarimi/.cache/huggingface/modules/datasets_modules/datasets/boolq/2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11/boolq.py", line 74, in _split_generators
downloaded_files = dl_manager.download_custom(urls_to_download, tf.io.gfile.copy)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/download_manager.py", line 150, in download_custom
get_from_cache(url, cache_dir=cache_dir, local_files_only=True, use_etag=False)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/file_utils.py", line 472, in get_from_cache
f"Cannot find the requested files in the cached path at {cache_path} and outgoing traffic has been"
FileNotFoundError: Cannot find the requested files in the cached path at /idiap/home/rkarimi/.cache/huggingface/datasets/eaee069e38f6ceaa84de02ad088c34e63ec97671f2cd1910ddb16b10dc60808c and outgoing traffic has been disabled. To enable file online look-ups, set 'local_files_only' to False.
hey
i do the exact same commands. for me it fails i guess might be issues with
caching maybe?
thanks
best
rabeeh
On Tue, Nov 24, 2020, 10:24 AM Quentin Lhoest <[email protected]>
wrote:
> Hi ! It runs on my side without issues. I tried
>
> from datasets import load_datasetload_dataset("boolq")
>
> What version of datasets and tensorflow are your runnning ?
> Also if you manage to get a minimal reproducible script (on google colab
> for example) that would be useful.
>
> —
> You are receiving this because you authored the thread.
> Reply to this email directly, view it on GitHub
> <https://github.com/huggingface/datasets/issues/879#issuecomment-732769114>,
> or unsubscribe
> <https://github.com/notifications/unsubscribe-auth/ABP4ZCGGDR2FUMRKZTIY5CTSRN3VXANCNFSM4T7R3U6A>
> .
>
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https://github.com/huggingface/datasets/issues/879 | boolq does not load | Could you check if it works on the master branch ?
You can use `load_dataset("boolq", script_version="master")` to do so.
We did some changes recently in boolq to remove the TF dependency and we changed the way the data files are downloaded in https://github.com/huggingface/datasets/pull/881 | Hi
I am getting these errors trying to load boolq thanks
Traceback (most recent call last):
File "test.py", line 5, in <module>
data = AutoTask().get("boolq").get_dataset("train", n_obs=10)
File "/remote/idiap.svm/user.active/rkarimi/dev/internship/seq2seq/tasks/tasks.py", line 42, in get_dataset
dataset = self.load_dataset(split=split)
File "/remote/idiap.svm/user.active/rkarimi/dev/internship/seq2seq/tasks/tasks.py", line 38, in load_dataset
return datasets.load_dataset(self.task.name, split=split)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 531, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File " /idiap/home/rkarimi/.cache/huggingface/modules/datasets_modules/datasets/boolq/2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11/boolq.py", line 74, in _split_generators
downloaded_files = dl_manager.download_custom(urls_to_download, tf.io.gfile.copy)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/download_manager.py", line 150, in download_custom
get_from_cache(url, cache_dir=cache_dir, local_files_only=True, use_etag=False)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/file_utils.py", line 472, in get_from_cache
f"Cannot find the requested files in the cached path at {cache_path} and outgoing traffic has been"
FileNotFoundError: Cannot find the requested files in the cached path at /idiap/home/rkarimi/.cache/huggingface/datasets/eaee069e38f6ceaa84de02ad088c34e63ec97671f2cd1910ddb16b10dc60808c and outgoing traffic has been disabled. To enable file online look-ups, set 'local_files_only' to False.
| 43 | boolq does not load
Hi
I am getting these errors trying to load boolq thanks
Traceback (most recent call last):
File "test.py", line 5, in <module>
data = AutoTask().get("boolq").get_dataset("train", n_obs=10)
File "/remote/idiap.svm/user.active/rkarimi/dev/internship/seq2seq/tasks/tasks.py", line 42, in get_dataset
dataset = self.load_dataset(split=split)
File "/remote/idiap.svm/user.active/rkarimi/dev/internship/seq2seq/tasks/tasks.py", line 38, in load_dataset
return datasets.load_dataset(self.task.name, split=split)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/load.py", line 611, in load_dataset
ignore_verifications=ignore_verifications,
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 476, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/builder.py", line 531, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File " /idiap/home/rkarimi/.cache/huggingface/modules/datasets_modules/datasets/boolq/2987db1f15deaa19500ae24de560eabeaf1f8ef51df88c0470beeec72943bf11/boolq.py", line 74, in _split_generators
downloaded_files = dl_manager.download_custom(urls_to_download, tf.io.gfile.copy)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/download_manager.py", line 150, in download_custom
get_from_cache(url, cache_dir=cache_dir, local_files_only=True, use_etag=False)
File "/idiap/user/rkarimi/libs/anaconda3/envs/internship/lib/python3.7/site-packages/datasets/utils/file_utils.py", line 472, in get_from_cache
f"Cannot find the requested files in the cached path at {cache_path} and outgoing traffic has been"
FileNotFoundError: Cannot find the requested files in the cached path at /idiap/home/rkarimi/.cache/huggingface/datasets/eaee069e38f6ceaa84de02ad088c34e63ec97671f2cd1910ddb16b10dc60808c and outgoing traffic has been disabled. To enable file online look-ups, set 'local_files_only' to False.
Could you check if it works on the master branch ?
You can use `load_dataset("boolq", script_version="master")` to do so.
We did some changes recently in boolq to remove the TF dependency and we changed the way the data files are downloaded in https://github.com/huggingface/datasets/pull/881 | [
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https://github.com/huggingface/datasets/issues/878 | Loading Data From S3 Path in Sagemaker | > neat feature
I dint get these clearly, can you please elaborate like how to work on these | In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load | 18 | Loading Data From S3 Path in Sagemaker
In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load
> neat feature
I dint get these clearly, can you please elaborate like how to work on these | [
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https://github.com/huggingface/datasets/issues/878 | Loading Data From S3 Path in Sagemaker | It could maybe work almost out of the box just by using `cached_path` in the text/csv/json scripts, no? | In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load | 18 | Loading Data From S3 Path in Sagemaker
In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load
It could maybe work almost out of the box just by using `cached_path` in the text/csv/json scripts, no? | [
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] |
https://github.com/huggingface/datasets/issues/878 | Loading Data From S3 Path in Sagemaker | Thanks thomwolf and julien-c
I'm still confusion on what you guys said,
I have solved the problem as follows:
1. read the csv file using pandas from s3
2. Convert to dictionary key as column name and values as list column data
3. convert it to Dataset using
`from datasets import Dataset`
`train_dataset = Dataset.from_dict(train_dict)` | In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load | 55 | Loading Data From S3 Path in Sagemaker
In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load
Thanks thomwolf and julien-c
I'm still confusion on what you guys said,
I have solved the problem as follows:
1. read the csv file using pandas from s3
2. Convert to dictionary key as column name and values as list column data
3. convert it to Dataset using
`from datasets import Dataset`
`train_dataset = Dataset.from_dict(train_dict)` | [
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https://github.com/huggingface/datasets/issues/878 | Loading Data From S3 Path in Sagemaker | We were brainstorming around your use-case.
Let's keep the issue open for now, I think this is an interesting question to think about. | In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load | 23 | Loading Data From S3 Path in Sagemaker
In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load
We were brainstorming around your use-case.
Let's keep the issue open for now, I think this is an interesting question to think about. | [
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https://github.com/huggingface/datasets/issues/878 | Loading Data From S3 Path in Sagemaker | > We were brainstorming around your use-case.
>
> Let's keep the issue open for now, I think this is an interesting question to think about.
Sure thomwolf, Thanks for your concern | In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load | 32 | Loading Data From S3 Path in Sagemaker
In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load
> We were brainstorming around your use-case.
>
> Let's keep the issue open for now, I think this is an interesting question to think about.
Sure thomwolf, Thanks for your concern | [
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https://github.com/huggingface/datasets/issues/878 | Loading Data From S3 Path in Sagemaker | I agree it would be cool to have that feature. Also that's good to know that pandas supports this.
For the moment I'd suggest to first download the files locally as thom suggested and then load the dataset by providing paths to the local files | In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load | 45 | Loading Data From S3 Path in Sagemaker
In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load
I agree it would be cool to have that feature. Also that's good to know that pandas supports this.
For the moment I'd suggest to first download the files locally as thom suggested and then load the dataset by providing paths to the local files | [
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https://github.com/huggingface/datasets/issues/878 | Loading Data From S3 Path in Sagemaker | Any updates on this issue?
I face a similar issue. I have many parquet files in S3 and I would like to train on them.
To be honest I even face issues with only getting the last layer embedding out of them. | In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load | 42 | Loading Data From S3 Path in Sagemaker
In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load
Any updates on this issue?
I face a similar issue. I have many parquet files in S3 and I would like to train on them.
To be honest I even face issues with only getting the last layer embedding out of them. | [
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https://github.com/huggingface/datasets/issues/878 | Loading Data From S3 Path in Sagemaker | Hi dorlavie,
You can find one solution that i have mentioned above, that can help you.
And there is one more solution also which is downloading files locally
| In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load | 28 | Loading Data From S3 Path in Sagemaker
In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load
Hi dorlavie,
You can find one solution that i have mentioned above, that can help you.
And there is one more solution also which is downloading files locally
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https://github.com/huggingface/datasets/issues/878 | Loading Data From S3 Path in Sagemaker | > Hi dorlavie,
> You can find one solution that i have mentioned above, that can help you.
> And there is one more solution also which is downloading files locally
mahesh1amour, thanks for the fast reply
Unfortunately, in my case I can not read with pandas. The dataset is too big (50GB).
In addition, due to security concerns I am not allowed to save the data locally | In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load | 68 | Loading Data From S3 Path in Sagemaker
In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load
> Hi dorlavie,
> You can find one solution that i have mentioned above, that can help you.
> And there is one more solution also which is downloading files locally
mahesh1amour, thanks for the fast reply
Unfortunately, in my case I can not read with pandas. The dataset is too big (50GB).
In addition, due to security concerns I am not allowed to save the data locally | [
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https://github.com/huggingface/datasets/issues/878 | Loading Data From S3 Path in Sagemaker | @dorlavie could use `boto3` to download the data to your local machine and then load it with `dataset`
boto3 example [documentation](https://boto3.amazonaws.com/v1/documentation/api/latest/guide/s3-example-download-file.html)
```python
import boto3
s3 = boto3.client('s3')
s3.download_file('BUCKET_NAME', 'OBJECT_NAME', 'FILE_NAME')
```
datasets example [documentation](https://huggingface.co/docs/datasets/loading_datasets.html)
```python
from datasets import load_dataset
dataset = load_dataset('csv', data_files=['my_file_1.csv', 'my_file_2.csv', 'my_file_3.csv'])
```
| In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load | 46 | Loading Data From S3 Path in Sagemaker
In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load
@dorlavie could use `boto3` to download the data to your local machine and then load it with `dataset`
boto3 example [documentation](https://boto3.amazonaws.com/v1/documentation/api/latest/guide/s3-example-download-file.html)
```python
import boto3
s3 = boto3.client('s3')
s3.download_file('BUCKET_NAME', 'OBJECT_NAME', 'FILE_NAME')
```
datasets example [documentation](https://huggingface.co/docs/datasets/loading_datasets.html)
```python
from datasets import load_dataset
dataset = load_dataset('csv', data_files=['my_file_1.csv', 'my_file_2.csv', 'my_file_3.csv'])
```
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] |
https://github.com/huggingface/datasets/issues/878 | Loading Data From S3 Path in Sagemaker | Thanks @philschmid for the suggestion.
As I mentioned in the previous comment, due to security issues I can not save the data locally.
I need to read it from S3 and process it directly.
I guess that many other people try to train / fit those models on huge datasets (e.g entire Wiki), what is the best practice in those cases? | In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load | 61 | Loading Data From S3 Path in Sagemaker
In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load
Thanks @philschmid for the suggestion.
As I mentioned in the previous comment, due to security issues I can not save the data locally.
I need to read it from S3 and process it directly.
I guess that many other people try to train / fit those models on huge datasets (e.g entire Wiki), what is the best practice in those cases? | [
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https://github.com/huggingface/datasets/issues/878 | Loading Data From S3 Path in Sagemaker | If I understand correctly you're not allowed to write data on disk that you downloaded from S3 for example ?
Or is it the use of the `boto3` library that is not allowed in your case ? | In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load | 37 | Loading Data From S3 Path in Sagemaker
In Sagemaker Im tring to load the data set from S3 path as follows
`train_path = 's3://xxxxxxxxxx/xxxxxxxxxx/train.csv'
valid_path = 's3://xxxxxxxxxx/xxxxxxxxxx/validation.csv'
test_path = 's3://xxxxxxxxxx/xxxxxxxxxx/test.csv'
data_files = {}
data_files["train"] = train_path
data_files["validation"] = valid_path
data_files["test"] = test_path
extension = train_path.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, s3_enabled=True)
print(datasets)`
I getting an error of
`algo-1-7plil_1 | File "main.py", line 21, in <module>
algo-1-7plil_1 | datasets = load_dataset(extension, data_files=data_files)
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/load.py", line 603, in load_dataset
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 155, in __init__
algo-1-7plil_1 | **config_kwargs,
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/site-packages/datasets/builder.py", line 305, in _create_builder_config
algo-1-7plil_1 | m.update(str(os.path.getmtime(data_file)))
algo-1-7plil_1 | File "/opt/conda/lib/python3.6/genericpath.py", line 55, in getmtime
algo-1-7plil_1 | return os.stat(filename).st_mtime
algo-1-7plil_1 | FileNotFoundError: [Errno 2] No such file or directory: 's3://lsmv-sagemaker/pubmedbert/test.csv`
But when im trying with pandas , it is able to load from S3
Does the datasets library support S3 path to load
If I understand correctly you're not allowed to write data on disk that you downloaded from S3 for example ?
Or is it the use of the `boto3` library that is not allowed in your case ? | [
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