Entry
stringlengths 6
10
| Entry Name
stringlengths 5
11
| Sequence
stringlengths 2
35.2k
| EC number
stringlengths 7
118
⌀ | Cofactor
stringlengths 38
1.77k
⌀ | Gene Ontology (biological process)
stringlengths 18
11.3k
⌀ | Gene Ontology (cellular component)
stringlengths 17
1.75k
⌀ | Gene Ontology (molecular function)
stringlengths 24
2.09k
⌀ | Pfam
stringlengths 8
232
⌀ | Gene3D
stringlengths 10
250
⌀ | Protein families
stringlengths 9
237
⌀ | Post-translational modification
stringlengths 16
8.52k
⌀ | Subcellular location [CC]
stringlengths 29
6.18k
⌀ | Catalytic activity
stringlengths 64
35.7k
⌀ | Kinetics
stringlengths 69
11.7k
⌀ | Pathway
stringlengths 27
908
⌀ | pH dependence
stringlengths 64
955
⌀ | Temperature dependence
stringlengths 70
1.16k
⌀ | Function [CC]
stringlengths 17
15.3k
⌀ | Organism
stringlengths 8
196
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F4I902 | CHS1_ARATH | MSTSYSFLLAGRELDVFLSFSGKIALDVDFGYDLSRNGIKAFKSESWKESSFKPIDLRTLEALTESKVAVVMTSDEEVSSVGFLEELIVIIEFQEKRSLTVIPVFLTKHPLDVEKVSQIFPERAKIWRTAIAKLDNIAAQYSFSRNLAVMHGTHRIKQIADDIRLMFLSSASSDFKGLAGMDRHMKALYALLALESDEKVRTIGIWGSSGVGKTTLARYTYAEISVKFQAHVFLENVENMKEMLLPSENFEGEDLRSVNHEMNEMAEAKQKHRKVLLIADGVNNIEQGKWIAENANWFAPGSRVILITQEKSLLVQSGVNHVYEVGSLRYDEALQLFSRFAFKQPYPSPDFERLSVRAVQLAGFLPVTIRLFGSFLTGRDKEEWEATLLKLNAKQGKDIKEVWKIMEALEDKDIVEASQR | 3.2.2.6 | null | borate transport [GO:0046713]; defense response [GO:0006952]; signal transduction [GO:0007165] | cytoplasm [GO:0005737]; nucleus [GO:0005634] | ADP binding [GO:0043531]; NAD+ nucleosidase activity [GO:0003953]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809] | PF00931;PF01582; | 1.10.8.430;3.40.50.300;3.40.50.10140; | null | null | SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:23617639, ECO:0000269|PubMed:23651299}. Nucleus {ECO:0000269|PubMed:23651299}. | CATALYTIC ACTIVITY: Reaction=H2O + NAD(+) = ADP-D-ribose + H(+) + nicotinamide; Xref=Rhea:RHEA:16301, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:17154, ChEBI:CHEBI:57540, ChEBI:CHEBI:57967; EC=3.2.2.6; Evidence={ECO:0000255|PROSITE-ProRule:PRU00204}; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:16302; Evidence={ECO:0000255|PROSITE-ProRule:PRU00204}; | null | null | null | null | FUNCTION: Confers resistance to low temperatures by limiting chloroplast damage and cell death, thus maintaining growth homeostasis (PubMed:16667557, PubMed:23617639, PubMed:23651299). Regulates steryl-esters and sterols accumulation (PubMed:16667557). Limits leaf necrosis associated with virulent bacterial infection (e.g. Pseudomonas syringae pv. tomato DC3000) (PubMed:23617639). {ECO:0000269|PubMed:16667557, ECO:0000269|PubMed:23617639, ECO:0000269|PubMed:23651299}. | Arabidopsis thaliana (Mouse-ear cress) |
F4I907 | GLYR2_ARATH | MPLVSLSFASSSSKAMALCSICPRIPLRFRPKPISPFLSKPQICLAYRVYSSLQSTTPSTRDELGTVSIGFLGMGIMGSPMAQNLIKAGCDVTVWNRTKSKCDPLVGLGAKYKSSPEEVTATCDLTFAMLADPESAIDVACGKNGAIFGISSGKGYVDVSTVDVASSILISKQIKDTGALFLEAPVSGSKKPAEDGQLIFLTAGDKPLYEKAAPFLDIMGKSKFYLGEVGNGAAMKLVVNMIMGSMMASFAEGILLSQKVGLDPNVLVEVVSQGAINAPMYSLKGPSMIKSVYPTAFPLKHQQKDMRLALGLAESVSQSTPIAAAANELYKVAKSYGLSDEDFSAVIEALKAAKSREA | 1.1.1.79; 1.1.1.n11 | null | null | chloroplast [GO:0009507]; chloroplast stroma [GO:0009570] | glyoxylate reductase (NADP+) activity [GO:0030267]; NAD binding [GO:0051287]; NADP binding [GO:0050661] | PF14833;PF03446; | 3.40.50.720; | HIBADH-related family, NP60 subfamily | null | SUBCELLULAR LOCATION: Plastid, chloroplast stroma {ECO:0000305|PubMed:18495639}. | CATALYTIC ACTIVITY: Reaction=glycolate + NADP(+) = glyoxylate + H(+) + NADPH; Xref=Rhea:RHEA:10992, ChEBI:CHEBI:15378, ChEBI:CHEBI:29805, ChEBI:CHEBI:36655, ChEBI:CHEBI:57783, ChEBI:CHEBI:58349; EC=1.1.1.79; Evidence={ECO:0000269|PubMed:18495639}; CATALYTIC ACTIVITY: Reaction=4-hydroxybutanoate + NADP(+) = H(+) + NADPH + succinate semialdehyde; Xref=Rhea:RHEA:26381, ChEBI:CHEBI:15378, ChEBI:CHEBI:16724, ChEBI:CHEBI:57706, ChEBI:CHEBI:57783, ChEBI:CHEBI:58349; EC=1.1.1.n11; Evidence={ECO:0000269|PubMed:18495639}; | BIOPHYSICOCHEMICAL PROPERTIES: Kinetic parameters: KM=34 uM for glyoxylate (check for NADPH) {ECO:0000269|PubMed:18495639}; KM=8.96 mM for succinate semialdehyde {ECO:0000269|PubMed:18495639}; KM=34 uM for NADPH (in the presence of glyoxylate as cosubstrate) {ECO:0000269|PubMed:18495639}; KM=12 uM for NADPH (in the presence of succinate semialdehyde as cosubstrate) {ECO:0000269|PubMed:18495639}; Vmax=40.6 umol/min/mg enzyme toward glyoxylate {ECO:0000269|PubMed:18495639}; Vmax=30.7 umol/min/mg enzyme toward succinate semialdehyde {ECO:0000269|PubMed:18495639}; | null | BIOPHYSICOCHEMICAL PROPERTIES: pH dependence: Optimum pH is 6.8-7.8. {ECO:0000269|PubMed:18495639}; | null | FUNCTION: Catalyzes the NADPH-dependent reduction of glyoxylate to glycolate as well as succinic semialdehyde (SSA) to gamma-hydroxybutyrate in vitro. May function in redox homeostasis and play a role in oxidative stress tolerance by detoxifying glyoxylate and SSA generated in glycolate metabolism and GABA metabolism, respectively. {ECO:0000269|PubMed:18495639}. | Arabidopsis thaliana (Mouse-ear cress) |
F4I9A2 | TNO1_ARATH | MHEKDDLPQDSIADGIENDDESNGQEEEELDPDQGTAFVDSKEDMFVDAPEELNFDTPSKEALTTDDDDNDDLGTHFNIEKGDWEKELAGLQEQFKLLTGENDLTGEDGNTTVDIVSRFSKFLKTAKEERIQHEVALKELHGVISGRDDEIADLTTKISELSSSQPVSEMGDQAQNLEHLEAATDRIMVSLSNVFGEGELQYGSSISEKLAHLENRVSFLGAKYTEFYYGADQLRKCLASDVLDLSFQEDFGSALGAACSELFELKQKEAAFFERLSHLEDENRNFVEQVNREKEMCESMRTEFEKLKAELELEKTKCTNTKEKLSMAVTKGKALVQNRDALKHQLSEKTTELANRLTELQEKEIALESSEVMKGQLEQSLTEKTDELEKCYAELNDRSVSLEAYELTKKELEQSLAEKTKELEECLTKLQEMSTALDQSELDKGELAKSDAMVASYQEMLSVRNSIIENIETILSNIYTPEEGHSFDIVEKVRSLAEERKELTNVSQEYNRLKDLIVSIDLPEEMSQSSLESRLAWLRESFLQGKDEVNALQNRIESVSMSLSAEMEEKSNIRKELDDLSFSLKKMEETAERGSLEREEIVRRLVETSGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRDSSDSSYGNEEIFEAFQSLLYVRDLEFSLCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKDLERSEEKSALLRDKLSMAIKKGKGLVQDREKFKTQLDEKKSEIEKLMLELQQLGGTVDGYKNQIDMLSRDLERTKELETELVATKEERDQLQQSLSLIDTLLQKVMKSVEIIALPVDLASEDPSEKIDRLAGYIQEVQLARVEEQEEIEKVKSEVDALTSKLAETQTALKLVEDALSTAEDNISRLTEENRNVQAAKENAELELQKAVADASSVASELDEVLATKSTLEAALMQAERNISDIISEKEEAQGRTATAEMEQEMLQKEASIQKNKLTEAHSTINSLEETLAQTESNMDSLSKQIEDDKVLTTSLKNELEKLKIEAEFERNKMAEASLTIVSHEEALMKAENSLSALQGEMVKAEGEISTLSSKLNVCMEELAGSSGNSQSKSLEIITHLDNLQMLLKDGGLISKVNEFLQRKFKSLRDVDVIARDITRNIGENGLLAGEMGNAEDDSTEAKSLLSDLDNSVNTEPENSQGSAADEDEISSSLRKMAEGVRLRNKTLENNFEGFSTSIDTLIATLMQNMTAARADVLNIVGHNSSLEEQVRSVENIVREQENTISALQKDLSSLISACGAAARELQLEVKNNLLELVQFQENENGGEMESTEDPQELHVSECAQRIKELSSAAEKACATLKLFETTNNAAATVIRDMENRLTEASVALEKAVLERDLNQTKVSSSEAKVESLEELCQDLKLQLENLRVKEEKWHEKEVELSTLYDKLLVQEQEAKENLIPASDMRTLFDKINGIEVPSVDLVNGLDPQSPYDVKKLFAIVDSVTEMQHQIDILSYGQKELNSTLAEKDLEIQGLKKATEAESTTELELVKAKNELSKLISGLEKLLGILASNNPVVDPNFSESWTLVQALEKKITSLLLESESSKSRAQELGLKLAGSEKLVDKLSLRVKEFEEKLQTKAIQPDIVQERSIFETPRAPSTSEISEIEDKGALGIKSISPVPTAAQVRTVRKGSTDHLSINIDSESEHLMNNNETDEDKGHVFKSLNMSGLIPTQGKIIADRVDGIWVSGGRVLMSRPQARLGVMVYSLLLHLWLLASIL | null | null | intracellular protein transport [GO:0006886]; protein targeting to vacuole [GO:0006623]; regulation of cell morphogenesis [GO:0022604]; regulation of microtubule cytoskeleton organization [GO:0070507]; response to lithium ion [GO:0010226]; response to mannitol [GO:0010555]; response to potassium ion [GO:0035864]; response to salt stress [GO:0009651]; root epidermal cell differentiation [GO:0010053]; root morphogenesis [GO:0010015]; vacuolar transport [GO:0007034]; vesicle fusion [GO:0006906] | cytoskeleton [GO:0005856]; trans-Golgi network membrane [GO:0032588] | null | null | null | null | null | SUBCELLULAR LOCATION: Golgi apparatus, trans-Golgi network membrane {ECO:0000269|PubMed:21521696}; Single-pass type IV membrane protein {ECO:0000255}. | null | null | null | null | null | FUNCTION: Tethering factor involved in vesicle fusion at the trans-Golgi network (TGN) thus being required for efficient protein trafficking to the vacuole (PubMed:21521696). Implicated in resistance to salt and osmotic stresses (PubMed:21521696). Modulates the cell morphology (e.g. epidermal cell file rotation (CFR) and cell expansion) in mature regions of roots and the base of hypocotyls as well as root skewing, a process leading to root movement within the soil in order to maximize anchorage and nutrient acquisition, probably by regulating microtubule stabilization independently of their orientation (PubMed:28399805). {ECO:0000269|PubMed:21521696, ECO:0000269|PubMed:28399805}. | Arabidopsis thaliana (Mouse-ear cress) |
F4I9G2 | ESV1_ARATH | MSEMAASSAISLLDIKLRRFGVGASNHELRLTKWFKGDQAGAPTRRFTCFADMLAPIRRSEKSEERRFDQKMSAHGAGIKTSSSAVPFASPKSRFLSKQEKFYPRCTPRLTGPQSRDTPPKRDTGIANEKDWGIDLLNENVNEAGTNEDGSSWFRESGHDLGDNGYRCRWSRMGGRSHDGSSEWTETWWEKSDWTGYKELGVEKSGKNSEGDSWWETWQEVLHQDEWSNLARIERSAQKQAKSGTENAGWYEKWWEKYDAKGWTEKGAHKYGRLNEQSWWEKWGEHYDGRGSVLKWTDKWAETELGTKWGDKWEEKFFSGIGSRQGETWHVSPNSDRWSRTWGEEHFGNGKVHKYGKSTTGESWDIVVDEETYYEAEPHYGWADVVGDSTQLLSIQPRERPPGVYPNLEFGPSPPPEPDLPPDQPQ | null | null | negative gravitropism [GO:0009959]; positive gravitropism [GO:0009958]; regulation of alpha-glucan metabolic process [GO:0032948]; regulation of starch metabolic process [GO:2000904]; seed development [GO:0048316]; starch granule initiation [GO:0062052] | chloroplast stroma [GO:0009570]; starch grain [GO:0043036] | starch binding [GO:2001070] | null | null | ESV1 family | null | SUBCELLULAR LOCATION: Plastid, chloroplast stroma {ECO:0000269|PubMed:27207856, ECO:0000269|PubMed:29681129, ECO:0000269|PubMed:34367195}. Plastid stroma {ECO:0000269|PubMed:34367195}. Note=Binds to starch granules in chloroplasts and plastids. {ECO:0000269|PubMed:27207856, ECO:0000269|PubMed:29681129, ECO:0000269|PubMed:34367195}. | null | null | null | null | null | FUNCTION: Binds preferentially to highly ordered alpha-glucans, such as starch and crystalline maltodextrins (PubMed:29681129, PubMed:35665549). Involved in the organization of the starch granule matrix, thus influencing starch turnover by modulating the accessibility of starch polymers to modifying and degrading enzymes involved in phosphorylation, hydrolyzes and synthesis, including starch synthases (SSI and SSIII), starch phosphorylases (PHS1), isoamylase, beta-amylase, glucan water dikinase (GWD) and phosphoglucan water dikinase (PWD) (PubMed:27207856, PubMed:29681129, PubMed:35665549). Prevents GWD- and PWD-mediated starch phosphorylation, and subsequent degradation (PubMed:29681129). Required for the control of starch degradation in leaves and starch distribution in nonphotosynthetic parts (e.g. cells immediately adjacent to veins, columella cells of root caps, stems, flowers and siliques) by limiting the hasty depletion of starch reserves during the night (PubMed:27207856, PubMed:34367195). Promotes gravitropic responses, negative in shoots but positive in roots, by maintaining starch granules (statoliths) accumulation in hypocotyls and roots columella, especially in dark conditions and in the endodermis, where starch is formed from transported glucose-6-phosphates (PubMed:34367195). {ECO:0000269|PubMed:27207856, ECO:0000269|PubMed:29681129, ECO:0000269|PubMed:34367195, ECO:0000269|PubMed:35665549}. | Arabidopsis thaliana (Mouse-ear cress) |
F4I9J7 | Y14_ARATH | MANIESEAVDFEPEEDDLMDEEGTAIDGADVSPRAGHPRLKSAIAGANGESAKKTKGRGFREEKDSDRQRRLSSRDFESLGSDGRPGPQRSVEGWIILVSGVHEETQEEDITNAFGDFGEIKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGPSGGESYRRKNSRYGRSQRSRSPRRRY | null | null | mRNA processing [GO:0006397]; mRNA transport [GO:0051028]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; positive regulation of gene expression [GO:0010628]; regulation of translation [GO:0006417]; RNA splicing [GO:0008380] | cytoplasm [GO:0005737]; cytosol [GO:0005829]; exon-exon junction complex [GO:0035145]; nuclear body [GO:0016604]; nuclear speck [GO:0016607]; nucleolus [GO:0005730]; nucleoplasm [GO:0005654]; nucleus [GO:0005634] | mRNA binding [GO:0003729] | PF00076; | 3.30.70.330; | RBM8A family | null | SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000269|PubMed:19435936}. Nucleus speckle {ECO:0000269|PubMed:19435936}. Cytoplasm {ECO:0000250|UniProtKB:Q9Y5S9}. Note=Nucleocytoplasmic shuttling protein. Travels to the cytoplasm as part of the exon junction complex (EJC) bound to mRNA. {ECO:0000250|UniProtKB:Q9Y5S9}. | null | null | null | null | null | FUNCTION: Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influencing downstream processes including nuclear mRNA export, subcellular mRNA localization, translation efficiency and nonsense-mediated mRNA decay (NMD). The MAGO-Y14 heterodimer inhibits the ATPase activity of EIF4A3, thereby trapping the ATP-bound EJC core onto spliced mRNA in a stable conformation. The MAGO-Y14 heterodimer interacts with the EJC key regulator PYM leading to EJC disassembly in the cytoplasm (By similarity). Can increase in vitro the expression from reporter constructs that contain leader introns required for the expression of different genes. In association with MAGO and PYM, participates in intron-mediated enhancement of gene expression (PubMed:21676911). The MAGO-Y14 heterodimer works synergistically with the NMD pathway to regulate male gametophyte development (PubMed:26867216). {ECO:0000250|UniProtKB:Q9Y5S9, ECO:0000269|PubMed:21676911, ECO:0000269|PubMed:26867216}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IAG2 | SSY3_ARATH | MISYFLNQDFSRKKQGRMAASGPKSSGPRGFGRRTTVGSAQKRTQKKNGEKDSNATSTATNEVSGISKLPAAKVDVQKQSSVVLNERNVLDRSDIEDGSDRLDKKTTDDDDLLEQKLKLERENLRRKEIETLAAENLARGDRMFVYPVIVKPDEDIEVFLNRNLSTLNNEPDVLIMGAFNEWRWKSFTRRLEKTWIHEDWLSCLLHIPKEAYKMDFVFFNGQSVYDNNDSKDFCVEIKGGMDKVDFENFLLEEKLREQEKLAKEEAERERQKEEKRRIEAQKAAIEADRAQAKAETQKRRELLQPAIKKAVVSAENVWYIEPSDFKAEDTVKLYYNKRSGPLTNSKELWLHGGFNNWVDGLSIVVKLVNAELKDVDPKSGNWWFAEVVVPGGALVIDWVFADGPPKGAFLYDNNGYQDFHALVPQKLPEELYWLEEENMIFRKLQEDRRLKEEVMRAKMEKTARLKAETKERTLKKFLLSQKDVVYTEPLEIQAGNPVTVLYNPANTVLNGKPEVWFRGSFNRWTHRLGPLPPQKMEATDDESSHVKTTAKVPLDAYMMDFVFSEKEDGGIFDNKNGLDYHLPVVGGISKEPPLHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQELNHNVDIVFPKYDCIKHNFVKDLQFNRSYHWGGTEIKVWHGKVEGLSVYFLDPQNGLFQRGCVYGCADDAGRFGFFCHAALEFLLQGGFHPDILHCHDWSSAPVSWLFKDHYTQYGLIKTRIVFTIHNLEFGANAIGKAMTFADKATTVSPTYAKEVAGNSVISAHLYKFHGIINGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEELQNRLGLKSADFPVVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHGDRARLVLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGAVPVVRKTGGLFDTVFDVDHDKERAQAQVLEPNGFSFDGADAPGVDYALNRAISAWYDGREWFNSLCKTVMEQDWSWNRPALEYLELYHSARK | 2.4.1.21 | null | amylopectin biosynthetic process [GO:0010021]; starch biosynthetic process [GO:0019252] | amyloplast [GO:0009501]; chloroplast [GO:0009507] | alpha-1,4-glucan synthase activity [GO:0033201]; glycogen (starch) synthase activity [GO:0004373]; identical protein binding [GO:0042802]; starch binding [GO:2001070]; starch synthase activity [GO:0009011] | PF16760;PF08323; | 3.40.50.2000;2.60.40.10; | Glycosyltransferase 1 family, Bacterial/plant glycogen synthase subfamily | null | SUBCELLULAR LOCATION: Plastid, chloroplast. Plastid, amyloplast {ECO:0000305}. | CATALYTIC ACTIVITY: Reaction=[(1->4)-alpha-D-glucosyl](n) + ADP-alpha-D-glucose = [(1->4)-alpha-D-glucosyl](n+1) + ADP + H(+); Xref=Rhea:RHEA:18189, Rhea:RHEA-COMP:9584, Rhea:RHEA-COMP:9587, ChEBI:CHEBI:15378, ChEBI:CHEBI:15444, ChEBI:CHEBI:57498, ChEBI:CHEBI:456216; EC=2.4.1.21; | null | PATHWAY: Glycan biosynthesis; starch biosynthesis. | null | null | FUNCTION: Involved in the synthesis of glycan chains within amylopectin in leaves. May play a regulatory role in the control of starch accumulation in plastids. {ECO:0000269|PubMed:15908598, ECO:0000269|PubMed:18811962, ECO:0000269|PubMed:19666739}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IAT2 | THOC2_ARATH | MSLPLLECKYVTEEFVREGKNGNYGTKLPSSVPMLRFLYELSWILVRGELPIQSCKAVLEGVEFLDKPSREELASCFADVVTQIAQDLTMSGDQRSRLIKLAKWLVESQTVPQRLFQERCEEEFLWEADMVKIKAQDLKGKEVRLNTRLLYQQTKFNLLREESEGYAKLATLLCRGSASSSHNASAATMGIIKSLIGHFDLDPNRVFDIVLDCFELEQDYDTFLNLIPIFPKSHASQILGFKFQYYQRLEVNSPVPVGLYKLTALLVKEEFINLESIYAHLLPKDEEVFEDYNVSSAKRFEEANKIGKINLAATGKDLMEDEKQGDVTVDLFAALDMESEAVTERLPELENNQTLGLLNGFLSVDDWYHANILFERLAPLNPVAHDQICSGLFRLIEKSITHSYRIARQTRFQSSSSASTVKLTPTANTTANRTYLDLPKEVFQMLVTVGPYLYRNTQLLQKICRVLRAYYLSALDLVRDGSNQEGSAYEVSRGHLKEVRLRVEEALGTCLLPSLQLVPANPAVGHEIWEVMSLLPYEARYRLYGEWEKDDEQNPLLLAARQVAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVNQIEAYRDMIAPVVDAFKYLTQLEYDILEYVVIERLAQSGRDKLKDDGINLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKRGQGIELVLLQELVQQMANVQYTENLTEDQLDAMAGSETLRYHATSFGMMRNNKALIKSSNRLRDSLLPNDEPKLAIPLLLLIAQHRSLVVVNADAPYIKMVTEQFDRCHGILLQYVDFLSSAVSPTTAYARLVPSLDELVHTYHLEAEVAFLVFRPVMRLFKCRRNGDVSWPLDSGESMDADSEISESESSMILDVGTSEKAVTWSDVLDTVRTMLPSKAWNSLSPDLYATFWGLTLYDLHVPRNRYESEISKQHTALKTLEEVADNSSSAITKRKKEKERIQESLDRLTGELKKHEEHVASVRRRLSREKDTWLSSCPDTLKINMEFLQRCIFPRCTFSMADSVYCAMFVNMLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEVGRLGRFLFETLKIAYHWKSKESVYEHECGNMPGFAVYYRYPNSQRVTFGQFVKVHWKWSGRITRLLIQCLESNEYMEIRNALIMLTKISGVFPVTRKTGINLEKRATKIKNDEREDLKVLATGVGAALSARKPHWVTDEEFSMGFLELKAPPVHTPKHASSQNGLLVGVSQGEPTGERATVNQQPESGGLGKDQMLKTKPLDGRTESIPSKSDQGHLKSKGGNPLDSQPSISKKSMEQKETDETPRISDENPVKPASKYSEAELKASSKRGASVNKSAKQDFGKDDGKSGKAIGRTSTADKDLNYLESRQSGLTKALSSTAANGSIATGSSKVKDDGAEALDAQKQSSRTVHSPRHEIVTSVRSSDRLQKRANAVEDSERISKRRKGDAEHKEHDSEPRSSDRDRSVEARLDLNKTVTDDQSTHRDQDRSKDKGYERQDRDHRERVDRSDKPRGDDVEKARDKSLERHGRERSVEKGLDKGTTRSYDRNKDERNKDDRSKLRHSEASLEKSHPDDHFHSQGLPPPPPLPPNIIPHSMAAKEDLERRAGGARHSQRLSPRHEEREKRRSEENLSVSVDDAKRRRDDDIRDRKRDDRETITVKGEEREREREREREREKSLPLKEDFEASKRRKLKREQQVPSAEPGEYSPMPHHSSLSTSMGPSSYEGRERKSSSMIQHGGYLEEPSIRLLGKEASSKMARRDPDPIAKSKSKNSNFLDIALESMTVNGKTTRGEQSGSGEIGSRE | null | null | miRNA processing [GO:0035196]; miRNA transport [GO:1990428]; mRNA export from nucleus [GO:0006406]; mRNA processing [GO:0006397]; RNA splicing [GO:0008380] | nuclear speck [GO:0016607]; nucleus [GO:0005634]; THO complex [GO:0000347]; THO complex part of transcription export complex [GO:0000445] | mRNA binding [GO:0003729]; RNA binding [GO:0003723] | PF11262;PF11732;PF16134; | null | THOC2 family | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000305}. | null | null | null | null | null | FUNCTION: Acts as a component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export. {ECO:0000250}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IAX0 | CAOA2_ARATH | MAQVHLTIFIFSSIFVISSSSFIPPPHPFDPLTETELKLVRNIINKSYPIGHNHKFTFQYVGLNEPEKSLVLSWHSSPDRNVKPPPRQAFVIARDKGMSREIVIDFSTRAIVSNKIHVGNGNPMLTIDEQQAATAVVQKYKPFCDSIIKRGLNLSEVVVTSSTMGWFGETKTKRFIRTIPFYLNGSVNTYLRPIEGMTIIVNLDQMKVTGFKDRFTGPMPKANGREYRISKLKPPFGPSLRSAVVFQPDGPGFKIDGHVVRWANWEFHMSFDVRAGLVISLASIFDMDMNRYRQVLYKGHLSEMFVPYMDPNDDWYFISYLDCGEFGCGQTAVSLEPYTDCPPNAAFMDGIFPGQDGTPTKISNVMCIFEKYAGDIMWRHTEAEVPGLKITEVRPDVSLVARMVTTVGNYDYIIEYEFKPSGSIKMGVGLTGVLEVKPVEYVHTSEIKEDDIYGTIVADNTVGVNHDHFVTFRLDLDIDGTENSFVRTELVTKRTPKSVNTPRKSYWTTKRNTAKTEADARVKLGLRAEELVVVNPTKKTKHGNEVGYRLLPGPASSPLLVQDDYPQIRAAFTNYNVWITPYNKSEVWASGLYADRSQGDDTLAVWSQRDREIENKDIVMWYTVGFHHVPCQEDFPTMPTMFGGFELRPTNFFEQNPVLKAKPFNLTTIPKCTTKNE | 1.4.3.21 | COFACTOR: Name=Cu cation; Xref=ChEBI:CHEBI:23378; Evidence={ECO:0000250|UniProtKB:P46883}; Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000250|UniProtKB:P12807}; Note=Binds 1 copper ion per subunit (By similarity). Can also use zinc ion as cofactor (By similarity). {ECO:0000250|UniProtKB:P12807, ECO:0000250|UniProtKB:P46883}; COFACTOR: Name=L-topaquinone; Xref=ChEBI:CHEBI:79027; Evidence={ECO:0000250|UniProtKB:P46883}; Note=Contains 1 topaquinone per subunit. {ECO:0000250|UniProtKB:P46883}; | intracellular arginine homeostasis [GO:0090465]; nitric oxide biosynthetic process [GO:0006809]; primary root development [GO:0080022]; putrescine catabolic process [GO:0009447]; response to abscisic acid [GO:0009737]; response to auxin [GO:0009733]; response to jasmonic acid [GO:0009753]; response to putrescine [GO:1904585]; response to salicylic acid [GO:0009751]; response to salt stress [GO:0009651]; response to water deprivation [GO:0009414]; response to wounding [GO:0009611] | nucleus [GO:0005634]; peroxisome [GO:0005777] | aliphatic amine oxidase activity [GO:0052595]; copper ion binding [GO:0005507]; primary amine oxidase activity [GO:0008131]; quinone binding [GO:0048038] | PF01179;PF02727;PF02728; | 3.10.450.40;2.70.98.20; | Copper/topaquinone oxidase family | PTM: Topaquinone (TPQ) is generated by copper-dependent autoxidation of a specific tyrosyl residue. {ECO:0000250|UniProtKB:P46883}. | SUBCELLULAR LOCATION: Peroxisome {ECO:0000250|UniProtKB:F4IAX1}. | CATALYTIC ACTIVITY: Reaction=a primary methyl amine + H2O + O2 = an aldehyde + H2O2 + NH4(+); Xref=Rhea:RHEA:16153, ChEBI:CHEBI:15377, ChEBI:CHEBI:15379, ChEBI:CHEBI:16240, ChEBI:CHEBI:17478, ChEBI:CHEBI:28938, ChEBI:CHEBI:228804; EC=1.4.3.21; Evidence={ECO:0000269|PubMed:28383668}; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:16154; Evidence={ECO:0000269|PubMed:28383668}; | null | PATHWAY: Amine and polyamine degradation; putrescine degradation. {ECO:0000269|PubMed:28383668}. | null | null | FUNCTION: Copper amine oxidase that can use putrescine and spermidine as substrates (PubMed:28383668). Involved in putrescine catabolism in peroxisomes in response to salt stress (PubMed:28383668). Regulates arginine-dependent nitric oxide (NO) production, a key signaling molecule regulating a wide range of physiological processes including responses to salt stress, by influencing arginine bioavailability (PubMed:28383668). Modulates primary root growth (PubMed:28383668). {ECO:0000269|PubMed:28383668}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IAX1 | CAOA3_ARATH | MAPLHFTILILFSFVIVVSSSSFTPPRHPFDPLTETELKLVRTIINKSYPVGPNHKFTFQYVGLNEPNKSLVLSWYSSPNHTIKPPPRQAFVIARDNGKTREIVLDFSSRAIVSDKIHVGNGYPMLSNDEQEASTELVVKFKPFIDSVAKRGLNVSEIVFTTSTIGWYGETKAEAERVIRLMPFYLDGTVNMYLRPIEGMTIIVNLDEMKVSEFKDRSVVTMPIANGTEYRISKLNPPFGPTLHNAVLLQPDGPGFKVDGHIVRWANWEFHISFDVRAGIVISLASLFDTDVNKYRQVLYKGHLSEMFIPYMDPSDDWYFITYLDCGDFGCGQCAVSLQPYTDCPAGAVFMDGIFAGQDGTPAKIPKVMCIFEKYAGDIMWRHTEAEIPNLEITEVRPDVSLVARIVTTVGNYDYIVDYEFKPSGSIKMGVGLTGVLEVKPVEYIHTSEIKLGEDIHGTIVADNTVGVNHDHFVTFRLHLDIDGTENSFVRNELVTTRSPKSVNTPRKTYWTTKPKTAKTEAEARVKLGLKAEELVVVNPNRKTKHGNEVGYRLLHGSAAGPLLAQDDFPQIRAAFTNYNVWITPYNRSEVWAGGLYADRSQGDDTLAVWSQRNRKIEKEDIVMWYTVGFHHVPSQEDYPTMPTLSGGFELRPTNFFERNPVLKTKPVKVTTARKCTPKND | 1.4.3.21 | null | putrescine catabolic process [GO:0009447]; response to abscisic acid [GO:0009737]; response to auxin [GO:0009733]; response to jasmonic acid [GO:0009753]; response to putrescine [GO:1904585]; response to salicylic acid [GO:0009751]; response to water deprivation [GO:0009414]; response to wounding [GO:0009611] | peroxisome [GO:0005777] | aliphatic amine oxidase activity [GO:0052595]; copper ion binding [GO:0005507]; primary amine oxidase activity [GO:0008131]; quinone binding [GO:0048038] | PF01179;PF02727;PF02728; | 3.10.450.40;2.70.98.20; | Copper/topaquinone oxidase family | PTM: Topaquinone (TPQ) is generated by copper-dependent autoxidation of a specific tyrosyl residue. {ECO:0000250|UniProtKB:P46883}. | SUBCELLULAR LOCATION: Peroxisome {ECO:0000269|PubMed:23915037}. | CATALYTIC ACTIVITY: Reaction=a primary methyl amine + H2O + O2 = an aldehyde + H2O2 + NH4(+); Xref=Rhea:RHEA:16153, ChEBI:CHEBI:15377, ChEBI:CHEBI:15379, ChEBI:CHEBI:16240, ChEBI:CHEBI:17478, ChEBI:CHEBI:28938, ChEBI:CHEBI:228804; EC=1.4.3.21; Evidence={ECO:0000269|PubMed:23915037}; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:16154; Evidence={ECO:0000269|PubMed:23915037}; | null | PATHWAY: Amine and polyamine degradation; putrescine degradation. {ECO:0000269|PubMed:23915037}. | null | null | FUNCTION: Copper amine oxidase that can use putrescine and spermidine as substrates (PubMed:23915037). Involved in putrescine catabolism in peroxisomes (PubMed:23915037). {ECO:0000269|PubMed:23915037}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IB81 | LYK3_ARATH | MNLTFYIFFLSLLPSFSSSKPMNCSDTTRLCSSFLAFKPNQNQSFSVIQSMFDVLPQDITADISGGYFFIKKNCSCLTTTHQYTTNTTFTIRQNVGYVYNVTVSAYSGLAFPPNTTRAARAGAVVSVQLLCGCSSGLWNYLMSYVAMAGDSVQSLSSRFGVSMDRIEDVNGILNLDNITAGDLLYIPLDSVPGEPYETSKINPPAPSPAPASSLANGNISDDQVNHTAKSGSHVPYIWIVGGLGVVLALLVLCILVCICLRSSSCSSSEEDGNGHNFQILRKSGFFCGSGRYNCCRSGDFRQTNGETQVVAIPKALGDGMFEIEKPMVFTYEEIRAATDEFSDSNLLGHGNYGSVYFGLLREQEVAVKRMTATKTKEFAAEMKVLCKVHHSNLVELIGYAATVDELFVVYEYVRKGMLKSHLHDPQSKGNTPLSWIMRNQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDEAFRAKISDFGLAKLVEKTGEGEISVTKVVGTYGYLAPEYLSDGLATSKSDIYAFGVVLFEIISGREAVIRTEAIGTKNPERRPLASIMLAVLKNSPDSMNMSSLKEFVDPNMMDLYPHDCLFKIATLAKQCVDDDPILRPNMKQVVISLSQILLSSIEWEATLAGNSQVFSGLVQGR | 2.7.11.- | null | abscisic acid-activated signaling pathway [GO:0009738]; defense response [GO:0006952]; defense response to fungus [GO:0050832]; innate immune response [GO:0045087]; negative regulation of defense response [GO:0031348]; phosphorylation [GO:0016310]; positive regulation of abscisic acid-activated signaling pathway [GO:0009789]; response to abscisic acid [GO:0009737] | plasma membrane [GO:0005886] | ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]; transmembrane receptor protein kinase activity [GO:0019199] | PF01476;PF07714; | 3.10.350.10;1.10.510.10; | Protein kinase superfamily, Ser/Thr protein kinase family | null | SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Single-pass membrane protein {ECO:0000250}. | null | null | null | null | null | FUNCTION: Putative Lysin motif (LysM) receptor kinase that may recognize microbe-derived N-acetylglucosamine (NAG)-containing ligands. {ECO:0000250}. | Arabidopsis thaliana (Mouse-ear cress) |
F4ICB6 | IBS1_ARATH | MGCVNSKQTVSVTPAIDHSGVFRDNVCSGSGRIVVEDLPPVTETKLLSWWSKSGKKSSSKKSGSELGSDFGELSESGRASSNCRSESVSFRLGNLSKYLEAEQVAAGWPAWLSNVAGEAIHGWVPFRSDAFEKLEKIGQGTYSSVFRARETETGRIVALKKVRFDNFEPESVRFMAREILILRKLNHPNIIKLEGIVTSKLSCSIHLVFEYMEHDLTGLLSSPDIDFTTPQIKCYMKQLLSGLDHCHARGVMHRDIKGSNLLVNNEGILKVADFGLANFCNASGNKQPLTSRVVTLWYRPPELLLGATEYGASVDLWSVGCVFAELLIGKPVLQGRTEVEQLHKIFKLCGSPPEDYWKKSKLPHAMLFKPQQHYDGCLRETLKLKGLSDADINLIETLLSIQPHKRGTASTALVSQYFTSKPFACDPSSLPVYSPSKEIDAKHREDTTRKKISGNGRRGTESRKPTRKPPAFAKLAPAEDVRHHSQKFQKRNGHSVHNSIDSDSTLFEKMQKPSNHEKDEASHVKNASQGDVPFSGPLQVSVSSGFAWAKRRKDDICVRSHNRSLSRGHIPNLLGPSPAFSENTDVDSKNNEKEKEEKHGERTDSQDREAYEMLKLSMLKKWRQLERPDSFGGSDEYHSQELSLELYQREEKAAKLGHLGYEDNDEKIEFSGPLLSKSYGVDELLERHERQIRQLVRKSWFQKGKKQGK | 2.7.11.- | null | defense response to bacterium [GO:0042742]; defense response to oomycetes [GO:0002229]; phosphorylation [GO:0016310]; positive regulation of defense response to bacterium [GO:1900426]; positive regulation of defense response to oomycetes [GO:1902290]; positive regulation of transcription elongation by RNA polymerase II [GO:0032968]; regulation of salicylic acid mediated signaling pathway [GO:2000031] | cyclin-dependent protein kinase holoenzyme complex [GO:0000307]; nucleus [GO:0005634]; plasma membrane [GO:0005886] | ATP binding [GO:0005524]; RNA polymerase II CTD heptapeptide repeat kinase activity [GO:0008353] | PF00069; | 1.10.510.10; | Protein kinase superfamily, Ser/Thr protein kinase family | null | null | null | null | null | null | null | FUNCTION: Required for beta-aminobutyric acid (BABA)-induced resistance (BABA-IR) against bacteria (e.g. P.syringae) and oomycetes (e.g. H.parasitica) via priming for salicylate (SA)-dependent defense responses such as pathogenesis-related PR-1 gene expression and trailing necrosis. Involved in BABA-mediated sterility (PubMed:15722464, PubMed:22209872). Necessary for the inheritance of BABA-priming to next generation, especially for the primed to be primed phenotype which consists in an enhanced second BABA-priming in transgenerationally primed plants (PubMed:22209872). {ECO:0000269|PubMed:15722464, ECO:0000269|PubMed:22209872}. | Arabidopsis thaliana (Mouse-ear cress) |
F4ICF4 | RBL10_ARATH | MVSVSLSHHNLWPPESGSTAFRGFATAASVHACHHVSRHLRLDFHLRSSLKKLQHFSDDARMKFARYQRVFVFNGANFLKSRVDIRLSQSSPFVCFFNGGESRLNPRGGEEGSSNPETSKRNTVNGRRWTNVLLAINVIMYIAQIASDGKVLTWGAKINSLIERGQLWRLATASVLHANPMHLMINCYSLNSIGPTAESLGGPKRFLAVYLTSAVAKPILRVLGSAMSYWFNKAPSVGASGAIFGLVGSVAVFVIRHKQMVRGGNEDLMQIAQIIALNMAMGLMSRRIDNWGHIGGLLGGTAMTWLLGPQWKYEYTTRDGRRVFMDSAPIPLLLRWRNEQRRL | 3.4.21.- | null | galactolipid metabolic process [GO:0019374]; phosphatidic acid biosynthetic process [GO:0006654]; proteolysis [GO:0006508] | chloroplast inner membrane [GO:0009706]; chloroplast membrane [GO:0031969] | serine-type endopeptidase activity [GO:0004252] | PF01694; | 1.20.1540.10; | Peptidase S54 family | null | SUBCELLULAR LOCATION: Plastid, chloroplast membrane {ECO:0000269|PubMed:22416142, ECO:0000269|PubMed:22738221}; Multi-pass membrane protein {ECO:0000255}. Note=Localizes probably to the inner membrane. {ECO:0000303|PubMed:22738221}. | null | null | null | null | null | FUNCTION: Rhomboid-type serine protease that catalyzes intramembrane proteolysis (PubMed:22416142, PubMed:22738221). Required for correct root growth, floral development, fertility and photoprotection (PubMed:22416142). May be involved in TIC22 processing during its import and in AOS accumulation in the chloroplast membrane (PubMed:22738221). {ECO:0000269|PubMed:22416142, ECO:0000269|PubMed:22738221}. | Arabidopsis thaliana (Mouse-ear cress) |
F4ICK8 | IWS1_ARATH | MGFEDDPYRDVDGEPIVDFDDFGNDREPSTEPLQDFDEDLADDIGDWDGEGSQTPVYDNDKVAKPRKRLVKKSSSERVTIDVPELIDEDVDDAEFDEFMGGRGGGSTDYDDKVGRKRKKEKERSSSGSGKEKRHKFPNRGERKSEEIDEMWKSIAHNPENDEEGVRTMDDDNFIDDTGLDPSERYGGDAGDRSPTHYPQAEEGEDEDEVNNLFKMGKKKKKTERNPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLSLLTDVLGKKQLQTEFLDHGVLTLLKNWLEPLPDGSLPNINIRAAILRVLTDFPIDLDQYDRREQLKKSGLGKVIMFLSKSDEETNSNRRLAKDLVDKWSRPIFNKSTRFEDMRNLDEDRVPYRRPPVKKPSNKATMESRDGDFDLEIRERKTGLTSGQSSRGDRQMTMRPEATPLDFLIRPQSKIDPDEIIARAKQVSQDQRRVKMNKKLQQLKGTKKKRLQATKVSVEGRGMIKYL | null | null | brassinosteroid mediated signaling pathway [GO:0009742]; regulation of DNA-templated transcription elongation [GO:0032784] | nucleus [GO:0005634] | null | PF08711; | 1.20.930.10; | IWS1 family | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00649, ECO:0000269|PubMed:20139304, ECO:0000269|PubMed:24838002}. | null | null | null | null | null | FUNCTION: Transcription factor involved in RNA polymerase II (RNAPII) transcription regulation. Involved in transcription elongation. May function at post-recruitment and elongation steps of transcription. May be recruited by BZR2/BES1 to target genes and promote their expression during transcription elongation process. Required for brassinosteroid (BR)-induced gene expression (PubMed:20139304). Required the for regulation of numerous nitrogen-responsive genes in roots. Acts in roots to repress NRT2.1 transcription in response to high nitrogen supply. This repression is associated with an IWS1-dependent increase of trimethylation on 'Lys-27' H3K27me3 at the NRT2.1 locus (PubMed:21788519). {ECO:0000269|PubMed:20139304, ECO:0000269|PubMed:21788519}. | Arabidopsis thaliana (Mouse-ear cress) |
F4ICX9 | TSA1_ARATH | MEIYTMKTNFLVLALSLCILLSSFHEVSCQDDGSGLSNLDLIERDYQDSVNALQGKDDEDQSAKIQSENQNNTTVTDKNTISLSLSDESEVGSVSDESVGRSSLLDQIKLEFEAHHNSINQAGSDGVKAESKDDDEELSAHRQKMLEEIEHEFEAASDSLKQLKTDDVNEGNDEEHSAKRQSLLEEIEREFEAATKELEQLKVNDFTGDKDDEEHSAKRKSMLEAIEREFEAAMEGIEALKVSDSTGSGDDEEQSAKRLSMLEEIEREFEAASKGLEQLRASDSTADNNEEEHAAKGQSLLEEIEREFEAATESLKQLQVDDSTEDKEHFTAAKRQSLLEEIEREFEAATKDLKQLNDFTEGSADDEQSAKRNKMLEDIEREFEAATIGLEQLKANDFSEGNNNEEQSAKRKSMLEEIEREFEAAIGGLKQIKVDDSRNLEEESAKRKIILEEMEREFEEAHSGINAKADKEESAKKQSGSAIPEVLGLGQSGGCSCSKQDEDSSIVIPTKYSIEDILSEESAVQGTETSSLTASLTQLVENHRKEKESLLGHRVLTSPSIASSTSESSATSETVETLRAKLNELRGLTARELVTRKDFGQILITAASFEELSSAPISYISRLAKYRNVIKEGLEASERVHIAQVRAKMLKEVATEKQTAVDTHFATAKKLAQEGDALFVKIFAIKKLLAKLEAEKESVDGKFKETVKELSHLLADASEAYEEYHGAVRKAKDEQAAEEFAKEATQSAEIIWVKFLSSL | null | null | defense response to fungus [GO:0050832]; photomorphogenesis [GO:0009640] | chloroplast thylakoid membrane [GO:0009535]; endoplasmic reticulum lumen [GO:0005788]; nuclear envelope [GO:0005635]; peroxisome [GO:0005777]; plant-type vacuole [GO:0000325]; secretory vesicle [GO:0099503] | calcium ion binding [GO:0005509] | null | null | null | PTM: Binds calcium through the EFE repeats. | SUBCELLULAR LOCATION: Endoplasmic reticulum lumen. Nucleus envelope {ECO:0000269|PubMed:15964904, ECO:0000269|PubMed:24348487}. Cytoplasm {ECO:0000269|PubMed:15964904, ECO:0000269|PubMed:24348487}. Note=In interphase, found in ER bodies and at the nuclear envelope (PubMed:24348487). During mitosis, concentrates in limited areas close to the ends of spindle microtubules ahead of separating chromatids (PubMed:15964904). {ECO:0000269|PubMed:15964904, ECO:0000269|PubMed:24348487}. | null | null | null | null | null | FUNCTION: Involved in seedling development in the dark. May be involved, when interacting with TSK, in the organization of spindle microtubules and may participate, when interacting with GIP1, in structural links between the nuclear envelope and the cytoskeleton. {ECO:0000269|PubMed:22133685, ECO:0000269|PubMed:24348487}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IDB2 | PHL_ARATH | MGVSFKISKVGRKFRPKISTELATPDSPKAIVLSGKPKATDDSNIGDVSGFSKPSLPDISPDHEVSFILSLYPNGYSIGKTSEAMQQISFRDVPKVLHPYDRAAEGLLSAIEAGRLPGDILEDIPCKFVDGVVICEVHDYRKHTSSQVSPVINKLRLKMSLENVVKDIPSMSDNSWTYGDLMEVESRILKALQPELCLDPLPRLDRLSKNPLTAKLDLSLSTLRRKRLRQMAEVTVMSQNKIQGKKVCIDRLPESSERGNLPGHLIMQQTNNNQAIQNLGTNMLAGLRSQPLQDAPNSSLALVPPQQQRYMGIGSTRNTQDQGSNSVSVSGASPGGLDAMLPYGSDSMNPGTSFHRKRESQEGQMSSMPGLNKRTRVSHMGPDGVPQQQLGQRMDGLHGSDTNWKNTLLQHQDMLGRSIQYPNTSIQRFSPHQMEGVMNQEGGPMQFPASQQGGMKYTSKEEPFETGKIDGGTRNNIPGVGSDANDLDPRIQSRMPHNAFIRSNFPQTSWNVNPGQQIEKEPKKEEQFSRRISAQSPRLSAGGPPQSPLSSKSGEFSGGSMGTHYGAVAAAQKDKAVTSIPAIGATQSVGSSANEAMQQRQHQAQMAAKRRTNSLPKTQVISTVGSPVSVNTISVPVNARSPSVGPQTLGDHAILDRFSKIERVAARYQLNCKKHKVDEYSRRPRVYAKQPLTVCLSNLSNEEVFKDEDEALSKSIFGGSMNTYKTRVIHFGQMERVMQGSVPSFIPRNRTRLVMSEKAVDGTVAWYQGDVDEGDVFQAEDFLLALPNTHIADLLATQFKSLMAREGYMIEEHIMAKPNRGDTGPISSHPNSAGGYPRGYSANDMQQYGDAVAGQASGEASKHGNTGNTPNNSTQNILANARMVPPTNSQALQMSQGLLSGVSMPMQPQQLDPQQSALLSSHSQQKNQQSMFTQQQHPQMQRPSMILPTNPLSAINSMSQSSGMQPGGQMANKYSPLQLQMLQQQQQAAVQKKIMMGLGSGVGMGMGMGMGMGMGSMGNSIAGLGALGNQLNMAGRGMGGTGISSSMSVPGIGNMGQNPMNLNPASNLNAISQQLRSGALTPQQNALFTQIRMGMANRGGVMGAPQTGISGVSGTRQMHPSSAGLSMLDQNRANLQRAAAMGNMGPPKLMPGMMNLYMNQQQQQQQLQQQPQQQQLQHQQQLQQPMSQPSQQLAQSPQQQQQLQQHEQPQQAQQQQQATASPLQSVLSPPQVGSPSAGITQQQLQQSSPQQMSQRTPMSPQQVNQRTPMSPQISSGAMHPMSTSNLEGCPASPQLSSQTMGSVGSITNSPMELQGPKNNSAGNNS | null | null | circadian rhythm [GO:0007623]; flower development [GO:0009908]; long-day photoperiodism, flowering [GO:0048574]; regulation of timing of transition from vegetative to reproductive phase [GO:0048510]; regulation of transcription by RNA polymerase II [GO:0006357]; response to light stimulus [GO:0009416] | cytoplasm [GO:0005737]; nuclear body [GO:0016604]; nucleus [GO:0005634]; SAGA complex [GO:0000124] | transcription coregulator activity [GO:0003712] | PF20474;PF12090; | null | null | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:24127609}. Nucleus, nuclear body {ECO:0000269|PubMed:24127609}. Cytoplasmic granule {ECO:0000269|PubMed:24127609}. Cytoplasm {ECO:0000269|PubMed:24127609}. Note=Circadian clock-regulated subcellular localization. During the night, mainly present in the cytoplasm. During the day, moves and accumulates progressively in the nuclei. {ECO:0000269|PubMed:24127609}. | null | null | null | null | null | FUNCTION: Triggers photoperiod-monitored flowering by repressing PHYB-dependent flowering negative regulation, probably through physical interactions with PHYB and CO. {ECO:0000269|PubMed:24127609, ECO:0000269|PubMed:24614229}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IDC2 | SWA2_ARATH | MSKIKPLSKSSQDLSLLTSDIASFASSIGLASALPSSGFNDTDFRKPAKSKTQKRKKPKKDQQHKDEDEEGEPKSNIGNEKGKDFGARKQNKDAPVKQTLQPKPKPGFLSIDDESTGYKKKRFDEFKSLPKLPLVKASLLSSEWYNDAAEFEEKVFGGRKVAVANKEDFKGVVEKKRELGERLMWQYAEDFATSKGKGGDMKMVISAQKSGTVADKITAFEIMVGENPIANMRSLDALLGMVTSKVGKRFAFKGLKALSEILIRLLPDRKLKSLLQRPLNIIPENKDGYSLLLFWYWEDCLKQRYERFVTALDESSKDMLPELKDKALKTIYFMLTSKSEQERKLLVSLVNKLGDPQNKSASNADYHLTNLLADHPNMKAVVIDEVDSFLFRPHLGLRAKYHAVNFLSQIRLSHKGEDPKVAKRLIDVYFALFKVLTTEANRKQGADDKGAADKKKSNPKDTKQEVSTDSPIELDSRILSALLTGVNRAFPYVSTDEADDIIESQTPVLFKLVHSANFNVGVQSLMLLDKISSKNKIVSDRFYRALYSKLLLPSAMNSSKAEMFIGLLLRAMKNDINIKRVAAFSKRVLQVALQQPPQYACGCLFLLSEVLKSRPPLWKMVVQRESVEEEEDIEHFEDVIEGDDVDPNKKAENDENVVEVDHDGVEKSSRDGDSSSDDEEALAIRLSDEEDDNASDDSEELIRNETPQLEEVMEVSNDMEKRSQPPMRPSSLPGGYDPRHREPSYCNADRASWWELGVLSKHAHPSVATMAGTLLSGTNIVYNGNPLNDLSLTAFLDKFMEKKPKQNTWHGGSQIEPSKKLDMSNRVIGAEILSLAEGDVAPEDLVFHKFYVNKMTSTKQSKKKKKKKLPEEEAAEELYDVNDGDGGENYDSDVEFEAGDESDNEEIENMLDDVDDNAVEEEGGEYDYDDLDGVAGEDDEELVADVSDAEMDTDMDMDLIDDEDDNNVDDDGTGDGGDDDSDGDDGRSKKKKKEKRKRKSPFASLEEYKHLIDQDEKEDSKTKRKATSEPTKKKKKKKSKASE | null | null | embryo sac development [GO:0009553]; polar nucleus fusion [GO:0010197]; pollen development [GO:0009555]; regulation of cell division [GO:0051302] | nucleolus [GO:0005730] | null | PF03914; | null | CBF/MAK21 family | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00768}. Nucleus, nucleolus {ECO:0000269|PubMed:19734265}. | null | null | null | null | null | FUNCTION: Together with NOC2, probably involved in pre-ribosome export from the nucleus to the cytoplasm (PubMed:19734265). Required for coordinated cell cycle progression during female gametophyte and pollen development (PubMed:15634699, PubMed:19734265). {ECO:0000269|PubMed:15634699, ECO:0000269|PubMed:19734265}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IDI6 | BRG2_ARATH | MAVDAHHLFLSPPQLFSNRELTMNNNTMEPTSGGFCNNNQTGYGVVSPFSVPNHTSTTTTATPPLLHVYGGSDTIPTTAGYYADGATNLDCEFFPLPTRKRSRDSSRSNYHHLLLQNPRSSSCVNAATTTTTTTLFSFLGQDIDISSHMNQQQHEIDRFVSLHLYQMERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEERERIGKVNHALEERVKSLSIENQIWRDLAQTNEATANHLRTNLEHVLAQVKDVSRGAGLEKNMNEEDDAESCCGSSCGGGGEETVRRRVGLEREAQDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTCPICTSPKNASVHVNMSS | 2.3.2.27 | null | defense response [GO:0006952]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; regulation of programmed cell death [GO:0043067] | null | metal ion binding [GO:0046872]; ubiquitin-protein transferase activity [GO:0004842] | PF13920; | 3.30.40.10; | null | null | null | CATALYTIC ACTIVITY: Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.; EC=2.3.2.27; Evidence={ECO:0000250|UniProtKB:Q9FHE4}; | null | PATHWAY: Protein degradation; proteasomal ubiquitin-dependent pathway. | null | null | FUNCTION: Probable E3 ubiquitin-protein ligase. Has no effect on the stability of the DELLA proteins. {ECO:0000269|PubMed:23482857}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IDQ6 | NIH_ARATH | MAKKKKDTKHTRLCEATGAWATKVLEDFRASGNDSYVFEQQLTNSERGIIHQMCRTMGLRSKSNGSGEERRLSLFKGDGISKSDKRRMYEARNQKEKEGDGISKSYSKHRYETRFQKAGGIRKTRISPKKLKCVSFPPEAKAVLHDLFTRYPPCDGDTTGTSLGIYTTGNVNSNWKDDFFKKPHMTKHDIENNVVSLSSRLKKERHFREIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDDALSVLNSDKNSHLLSAVKRDFKDEDKVSLDEAIDLAWTNDEFDCLVDLVSSEGSHEAYNYQNSTTGLTPLMVFAGKGRVSDVCKLLSVGADCTLKSKEGITALELAEKENQFETAQIIREHAGNIQSNSQQAQDLLDKYMATIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPSSSSNCSLNAHDPGILRAVIAVGLYPMLGRMCPLSKNRTRSVIETIAGAKVRVPSLSNNVDMSSTKFDEALIVFDEITRGDWGVVIRSCTVLPTIPVLLFSREIAVSTTESYDAVKSDDEEDHKVGNVGDAMDIDKEVGRPGEKIMLGPENSVKVVVDRWLPFKVTAFEIAQMYILRERLMASILFKVKHPKENLPPHLGASMYAIASVLSYDSLAQSSVQTVAVQPITSVVDATSPRDDIPSTNPNELREHDPNTTPMGSKLELANKLGLGNMEESLPSNFADGNEQPDPNTSPVEDVSAATKQKKMQSESKRCKSLNNVDLGNIEENFGNMEENPPSDLAIGNEQTLPKLASNLDMGNMEENTPSDLANGNEKTEPNSANSMDLGNMEENTPSDLANGNKKKEPKSVSKLDLGSEKVSIPSNLVNGNEQHDLNIAPGEDASAAKQPEKKRSRSKKRKSGNNLDLGKMEKSKPSDLANENEQTEPKSANNLDLGNMKENTPSDLANENEQTELRLPNNSDYGNMEESLPLNLANGDEQPDPTTAPMEAAKQPKKKRSRSKKCKSVNNLDLGNMEENKPSDLANGNEQKDPESVNRLDPGKEKESIPSNLVSGNEQPDSNTAPAKKPKKKKRKLANNFDSVNNMEEKMPSTNVLSQGNKSGLIEEKPSIPSDQ | 3.6.4.12; 3.6.4.13 | null | DNA metabolic process [GO:0006259] | nucleus [GO:0005634] | ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724] | PF00270;PF21010;PF04408;PF00271;PF07717;PF01424; | 1.20.120.1080;1.25.40.20;3.40.50.300;3.30.1370.50; | DExH box helicase family | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:10471743}. | CATALYTIC ACTIVITY: Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13; Evidence={ECO:0000305}; CATALYTIC ACTIVITY: Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.12; Evidence={ECO:0000305}; | null | null | null | null | FUNCTION: May function as an ATP-dependent RNA/DNA helicase. Binds DNA in vitro in a non-specific manner. {ECO:0000269|PubMed:10471743}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IDS7 | VPS18_ARATH | MDQGRQVFSVDLLERYATKNRGMITCMAAGNDVIVLGTSKGWIIRYDFGVGSSNDIDLAVGRTGEQSIHKVFVDPGGSHCIATVTGVGGAETFYTHAKWLKPRVLSRLKGLLVNAVAWNRQQITEVSTKEIILGTQDGQLFEMAVDEKDKREKYIKFLFELEELPEAFKALQMETANISSGMRYYVMAVTPTRLYSFTGIGTLESVFASYKERAVHFMELPGEIPNSELHFFIKQRRAVHFAWLSGTGIYHGGLNFGAQHSYPNGDENFVENKALLDYSKLSDGTEAVKPGSMALSEYHFLLLIGNKVKVVNRISEQIIEELQFDITSDSVSRGIIGLCSDASANVFYAYDQNSIFQVSVIDEGRDMWKVYLDLKVYAAALANCRDPLQRDQVYLVQAESAFTDKEYLRAASFYAKINYVISFEEVTLKFISINEPEALRTFLLHKLDNLSKDDKCQITMISTWATELYLDKINRLLLEDDTAIENRDSEYHSVIQEFRAFMSDCKDELDEATTVKILESYGRVEELVYFANLKEQYEIVVLHYIQQGEAKKALEVLQKSSVSVELQYQFAPELIMLDAYETVESWMANKNLNPRRLITAMMRYSSGPHAKNETHEVIKYLEFCVHRLHNEDPGIHSLLLSLYAKQEDDGALLRFLQCKFGKGRENGPEFFYDPKYALRLCLKERRTRACVHIYSMMSMHEEAVALALQIDPELAMAEADKVEDDEDLRKKLWLMVAKHVVKQEKGAKRENIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFKEAICSSLEDYNKQIEQLKEEMNDATRGADNIRNDISALTQRYAVIDRDEECGVCKRKILMMSGDFRMAQGYSSAGPLAPFYVFPCGHSFHAQCLITHVTSCAHEEQAEHILDLQKQLTLLGSETRRDINGNRSDEPITSTTTADKLRSELDDAIASECPFCGELMINEITLPFIKPEDSQYSTSWDLRSETNLANQRTISLPV | null | null | endosome organization [GO:0007032]; endosome to lysosome transport [GO:0008333]; intracellular protein transport [GO:0006886]; lysosome organization [GO:0007040]; organelle fusion [GO:0048284]; root morphogenesis [GO:0010015]; vesicle docking involved in exocytosis [GO:0006904] | CORVET complex [GO:0033263]; cytoplasm [GO:0005737]; endosome membrane [GO:0010008]; extracellular region [GO:0005576]; HOPS complex [GO:0030897]; plant-type vacuole membrane [GO:0009705] | metal ion binding [GO:0046872]; protein-macromolecule adaptor activity [GO:0030674] | PF00637;PF05131; | null | VPS18 family | null | SUBCELLULAR LOCATION: Endosome membrane {ECO:0000250|UniProtKB:Q9P253}; Peripheral membrane protein {ECO:0000250|UniProtKB:Q9P253}; Cytoplasmic side {ECO:0000250|UniProtKB:Q9P253}. Vacuole membrane {ECO:0000269|PubMed:29463724}; Peripheral membrane protein {ECO:0000269|PubMed:29463724}; Cytoplasmic side {ECO:0000250|UniProtKB:Q9P253}. Cytoplasm {ECO:0000269|PubMed:29463724}. Note=Co-localizes with VPS39 at subdomains of the vacuolar membrane, and with VPS3 and RABF2B at punctate compartments in the cytoplasm, with faintly dispersed distribution in the cytosol. Sometimes observed at the vertex zone, the ring-shaped edge of vacuole-vacuole contact sites. Co-localizes with RABG3F. {ECO:0000269|PubMed:29463724}. | null | null | null | null | null | FUNCTION: Essential protein required during embryogenesis. Believed to act as a core component of the putative HOPS endosomal tethering complex and of the class C core vacuole/endosome tethering (CORVET) complex. CORVET is required for vacuolar transport of SYP22. HOPS is required for the central vacuole formation. Involved in root development (PubMed:29463724). Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways (By similarity). {ECO:0000250|UniProtKB:Q9P253, ECO:0000269|PubMed:29463724}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IDU4 | MBOA1_ARATH | MDMSSMAGSIGVSVAVLRFLLCFVATIPVSFACRIVPSRLGKHLYAAASGAFLSYLSFGFSSNLHFLVPMTIGYASMAIYRPKCGIITFFLGFAYLIGCHVFYMSGDAWKEGGIDSTGALMVLTLKVISCSMNYNDGMLKEEGLREAQKKNRLIQMPSLIEYFGYCLCCGSHFAGPVYEMKDYLEWTEGKGIWDTTEKRKKPSPYGATIRAILQAAICMALYLYLVPQYPLTRFTEPVYQEWGFLRKFSYQYMAGFTARWKYYFIWSISEASIIISGLGFSGWTDDASPKPKWDRAKNVDILGVELAKSAVQIPLVWNIQVSTWLRHYVYERLVQNGKKAGFFQLLATQTVSAVWHGLYPGYMMFFVQSALMIAGSRVIYRWQQAISPKMAMLRNIMVFINFLYTVLVLNYSAVGFMVLSLHETLTAYGSVYYIGTIIPVGLILLSYVVPAKPSRPKPRKEE | 2.3.1.-; 2.3.1.23; 2.3.1.n6; 2.3.1.n7 | null | galactolipid biosynthetic process [GO:0019375]; glycerolipid biosynthetic process [GO:0045017]; glycerophospholipid biosynthetic process [GO:0046474]; lipid modification [GO:0030258]; phospholipid biosynthetic process [GO:0008654]; triglyceride biosynthetic process [GO:0019432] | endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]; extracellular region [GO:0005576]; plasma membrane [GO:0005886] | 1-acylglycerol-3-phosphate O-acyltransferase activity [GO:0003841]; 1-acylglycerophosphocholine O-acyltransferase activity [GO:0047184]; 1-acylglycerophosphoethanolamine O-acyltransferase activity [GO:0106262]; 1-acylglycerophosphoserine O-acyltransferase activity [GO:0106263]; acyltransferase activity [GO:0016746]; lysophospholipid acyltransferase activity [GO:0071617] | PF03062; | null | Membrane-bound acyltransferase family | null | SUBCELLULAR LOCATION: Endoplasmic reticulum membrane {ECO:0000305|PubMed:22923678}; Multi-pass membrane protein {ECO:0000305|PubMed:22923678}. | CATALYTIC ACTIVITY: Reaction=a 1-acyl-sn-glycero-3-phosphocholine + an acyl-CoA = a 1,2-diacyl-sn-glycero-3-phosphocholine + CoA; Xref=Rhea:RHEA:12937, ChEBI:CHEBI:57287, ChEBI:CHEBI:57643, ChEBI:CHEBI:58168, ChEBI:CHEBI:58342; EC=2.3.1.23; Evidence={ECO:0000269|PubMed:18154737, ECO:0000269|PubMed:24189065}; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:12938; Evidence={ECO:0000269|PubMed:18154737, ECO:0000269|PubMed:24189065}; CATALYTIC ACTIVITY: Reaction=(9Z)-octadecenoyl-CoA + 1-(9Z-octadecenoyl)-sn-glycero-3-phosphocholine = 1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phosphocholine + CoA; Xref=Rhea:RHEA:37387, ChEBI:CHEBI:28610, ChEBI:CHEBI:57287, ChEBI:CHEBI:57387, ChEBI:CHEBI:74669; Evidence={ECO:0000269|PubMed:24189065}; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:37388; Evidence={ECO:0000269|PubMed:24189065}; CATALYTIC ACTIVITY: Reaction=(9Z,12Z)-octadecadienoyl-CoA + 1-(9Z-octadecenoyl)-sn-glycero-3-phosphocholine = 1-(9Z)-octadecenoyl-2-(9Z,12Z)-octadecadienoyl-sn-glycero-3-phosphocholine + CoA; Xref=Rhea:RHEA:37391, ChEBI:CHEBI:28610, ChEBI:CHEBI:57287, ChEBI:CHEBI:57383, ChEBI:CHEBI:74670; Evidence={ECO:0000269|PubMed:24189065}; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:37392; Evidence={ECO:0000269|PubMed:24189065}; CATALYTIC ACTIVITY: Reaction=(9Z,12Z,15Z)-octadecatrienoyl-CoA + 1-(9Z-octadecenoyl)-sn-glycero-3-phosphocholine = 1-(9Z-octadecaenoyl)-2-(9Z,12Z,15Z-octadecatrienoyl)-sn-glycero-3-phosphocholine + CoA; Xref=Rhea:RHEA:56408, ChEBI:CHEBI:28610, ChEBI:CHEBI:57287, ChEBI:CHEBI:74034, ChEBI:CHEBI:86133; Evidence={ECO:0000269|PubMed:24189065}; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:56409; Evidence={ECO:0000269|PubMed:24189065}; CATALYTIC ACTIVITY: Reaction=a 1-acyl-sn-glycero-3-phosphoethanolamine + an acyl-CoA = a 1,2-diacyl-sn-glycero-3-phosphoethanolamine + CoA; Xref=Rhea:RHEA:32995, ChEBI:CHEBI:57287, ChEBI:CHEBI:58342, ChEBI:CHEBI:64381, ChEBI:CHEBI:64612; EC=2.3.1.n7; Evidence={ECO:0000269|PubMed:18154737}; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:32996; Evidence={ECO:0000269|PubMed:18154737}; CATALYTIC ACTIVITY: Reaction=a 1-acyl-sn-glycero-3-phospho-L-serine + an acyl-CoA = a 1,2-diacyl-sn-glycero-3-phospho-L-serine + CoA; Xref=Rhea:RHEA:33191, ChEBI:CHEBI:57262, ChEBI:CHEBI:57287, ChEBI:CHEBI:58342, ChEBI:CHEBI:64379; EC=2.3.1.n6; Evidence={ECO:0000269|PubMed:18154737}; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:33192; Evidence={ECO:0000269|PubMed:18154737}; | null | null | null | null | FUNCTION: Lysophospholipid acyltransferase with broad specificity (PubMed:18154737). Mediates the conversion of lysophosphatidylethanolamine (1-acyl-sn-glycero-3-phosphoethanolamine or LPE) into phosphatidylethanolamine (1,2-diacyl-sn-glycero-3-phosphoethanolamine or PE) (LPEAT activity) (PubMed:18154737). Catalyzes the acylation of lysophosphatidylserine (1-acyl-2-hydroxy-sn-glycero-3-phospho-L-serine or LPS) into phosphatidylserine (1,2-diacyl-sn-glycero-3-phospho-L-serine or PS) (LPSAT activity) (PubMed:18154737). Can convert lysophosphatidylcholine (1-acyl-sn-glycero-3-phosphocholine or LPC) into phosphatidylcholine (1,2-diacyl-sn-glycero-3-phosphocholine or PC) (LPCAT activity) (PubMed:18154737, PubMed:24189065, PubMed:25268378). Exhibits preference for C18-unsaturated acyl-CoA when transferring an acyl group to lysophosphatidylcholine (PubMed:24189065, PubMed:25268378). Can also utilize lysophosphatidylglycerol (LPG) as substrate in vitro (PubMed:18154737). Has neither activity towards lysophosphatidic acid (LPA) nor lysophosphatidylinositol (LPI) (PubMed:18154737). Lysophospholipid acyltransferases catalyze the reacylation step of the phospholipid remodeling pathway also known as the Lands cycle (Probable). The primary function of the Lands cycle is to provide a route for acyl remodeling to modify fatty acid (FA) composition of phospholipids derived from the Kennedy pathway (PubMed:22932756, PubMed:23150634). Is involved in PC acyl editing and phosphocholine headgroup exchange between PC and diacylglycerols. This processes control the majority of acyl fluxes through PC to provide polyunsaturated fatty acids for triacylglycerols synthesis in seeds (PubMed:22932756, PubMed:24189065). Involved with LPCAT2 in the direct incorporation of newly synthesized fatty acids exported form the chloroplast into PC through acyl editing (PubMed:31511316). {ECO:0000269|PubMed:18154737, ECO:0000269|PubMed:22932756, ECO:0000269|PubMed:23150634, ECO:0000269|PubMed:24189065, ECO:0000269|PubMed:25268378, ECO:0000269|PubMed:31511316, ECO:0000305|PubMed:18154737}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IDW9 | PTD_ARATH | MATAGSSYSVSTDHQVSSPLVNLGNVAGVCIMSNAWKVEQEPSLINFISAFLSANSFRLNFVSIPPDLIFNCGGVSIAFVFVTKWDFSNVASIFSRVKRLKGQFAQLYVVATLSTKEQSDSFMRSYFQYEMEFGKPAFVQVTDAEMGFEKIVKIAHSRGVCKQQKVASKLKVERKRTVQDTNIFIRFVTSIPNINKHDANTLYQAIGSIEAIAKASKEDILANTDLSSKKADTLTRFFQDPEFYLSPKFN | 3.1.-.- | null | chromosome segregation [GO:0007059]; male meiotic nuclear division [GO:0007140]; plant-type sporogenesis [GO:0048236]; pollen development [GO:0009555]; positive regulation of reciprocal meiotic recombination [GO:0010845]; reciprocal meiotic recombination [GO:0007131]; resolution of meiotic recombination intermediates [GO:0000712] | chromosome [GO:0005694]; nucleus [GO:0005634] | endonuclease activity [GO:0004519] | PF14520; | 1.10.150.20; | ERCC1/RAD10/SWI10 family | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000305}. | null | null | null | null | null | FUNCTION: Required for chromosome segregation during meiosis (PubMed:16394097). During diakinesis and prometaphase I, essential for the formation of class I meiotic crossovers and homologous recombination (PubMed:16394097, PubMed:21771883, PubMed:24656236). {ECO:0000269|PubMed:16394097, ECO:0000269|PubMed:21771883, ECO:0000269|PubMed:24656236}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IDY5 | BTSL1_ARATH | MGVGDPLPLPPEKNRREVNKPPDIASTSSSSASAVNNARLSDAPILLFVYFHKAFRAQLAELQFLAGDTVRSGSDLAVELRSKFEFLKLVYKYHSAAEDEVIFSALDTRVKNIVFNYSLEHDATDDLFTSVFHWLNVLEEEQGNRADVLREVVLCIGTIQSSICQHMLKEERQVFPLMIENFSFEEQASLVWQFICSVPVMVLEEIFPWMTSLLSPKEKSEVETCFKEVVPNELSLQLVINSWLIDDSQSSLTALTKIMKGVQSVEVSENMTNSQTNSSSSGVFQRFWQWSKKMSFSSPNTGHILVHGIHLWHNAIRKDLVDIQKGLCQLTFPSLSLDLNVLVVRLNFLADVLIFYSNAFKTFFYPVFEDMVDQQHSSSSKQFTIDGHVENFKKSLDLETRAGSDNFVITLQEKLESLILTVAKQFSIEETEVFPIISKNCNIEMQRQLLYRSIHFLPLGLLKCVIMWFSAQLPEDECQSIIHYLSSEDSFPNKPFAHLLLQWFRFGYSGKTPVESFWNELSFMFKPRCSFEEELTEEASGSFFQQSPQKLFKVSDPYSMDPPAGYMNETPYSSAMNQQILIPGKLRPLLHLPDLFGDKTIGEHLTMDLKPIDLIFYFHKAMKKDLDYLVRGSARLATDYSFLGEFQQRFHLIKFLYQIHSDAEDEIAFPALEAKGKLQNISQSYSIDHELEVEHLNKVSFLLNELAELNMLVLDHKNVKYEKLCMSLQDICKSIHKLLSEHLHREETELWCLFRDCFTIEEQEKIIACMLGRISGEILQDMIPWLMESLIPDEQHAVMSLWRQATRKTMFGEWLTEWYNSHAVEEETEEANKDPSENSDPLDVVWSYLFEGAADEYKGSICSKPLEETELKGIMNKPLGKAAPNNKVEFGNKEENHLEISGSKKVCTGADETKYKEQTDSNAQAFQMSHNTSQSGQDSRYECLLSMSQEDVEATIRRISRDSSLDPQKKSYIIQNLLMSRWIATQRIYNLEPSILSSNREAVPGQNPSYRDPHKLIFGCKHYKRSCKLLAPCCNKLYTCIRCHDEEVDHLLDRKQITKMMCMKCMIIQPVGASCSNISCSSSMGKYYCKICKLFDDDREIYHCPYCNLCRLGKGLSIDYFHCMKCNACMSRLIVEHVCREKCLEDNCPICHEYIFTSNSPVKALPCGHVMHSTCFQEYTCSHYTCPICSKSLGDMQVYFRMLDALLAEQKMPDEYLNQTQVILCNDCGRKGNAPYHWLYHKCSSCASYNTRLF | null | null | cellular response to iron ion starvation [GO:0010106]; intracellular iron ion homeostasis [GO:0006879]; iron import into cell [GO:0033212]; iron ion import across plasma membrane [GO:0098711]; protein ubiquitination [GO:0016567]; regulation of iron ion transport [GO:0034756]; response to iron ion [GO:0010039]; ubiquitin-dependent protein catabolic process [GO:0006511] | membrane [GO:0016020]; nucleus [GO:0005634] | ligase activity [GO:0016874]; ubiquitin protein ligase activity [GO:0061630]; zinc ion binding [GO:0008270] | PF01814;PF05495;PF13639;PF14599; | 2.20.28.10;1.20.120.520;3.30.40.10; | null | null | SUBCELLULAR LOCATION: Membrane {ECO:0000255}; Single-pass membrane protein {ECO:0000255}. Nucleus {ECO:0000250|UniProtKB:Q8LPQ5}. | null | null | PATHWAY: Protein modification; protein ubiquitination. {ECO:0000305}. | null | null | FUNCTION: Probable E3 ubiquitin-protein ligase that may regulate the response to iron deficiency and thus contributes to iron homeostasis. {ECO:0000250|UniProtKB:Q8LPQ5}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IE66 | PRP22_ARATH | MPSMAQGELKSFVQNSRPNPKSPTVSPFSMRQKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDANGPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYVDATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGNDMLAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLFRAKPECVIFNELMQTSKKYIKNLTIIDSLWLSELAPHHFQTAE | 3.6.4.13 | null | mRNA processing [GO:0006397]; positive regulation of transcription by RNA polymerase I [GO:0045943]; regulation of RNA splicing [GO:0043484]; RNA splicing [GO:0008380] | nucleolus [GO:0005730]; nucleus [GO:0005634]; spliceosomal complex [GO:0005681] | ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; double-stranded RNA binding [GO:0003725]; RNA helicase activity [GO:0003724] | PF00270;PF21010;PF04408;PF00271;PF07717; | 1.20.120.1080;3.40.50.300; | DEAD box helicase family, DEAH subfamily, PRP22 sub-subfamily | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:23771891}. Nucleus, nucleolus {ECO:0000269|PubMed:23771891}. | CATALYTIC ACTIVITY: Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13; | null | null | null | null | FUNCTION: Involved in pre-mRNA splicing. Plays a role during development in processes such as meristem maintenance, leaf morphogenesis and root morphogenesis. {ECO:0000269|PubMed:23771891}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IED2 | NAC13_ARATH | MDLSVENGGLAPGFRFHPTDEELVVYYLKRKIRRKKLRVEAIGETDVYKFDPEELPEKALYKTRDRQWFFFSLRDRKHGSRSSRATERGYWKATGKDRVIHCDSRPVGEKKTLVFHRGRAPNGERTNWVMHEYTLHKEELKRCGGEDVKDAYVLYKIYKKSGSGPKNGEQYGAPFIEEEWAEDDDDDVDEPANQLVVSASVDNSLWGKGLNQSELDDNDIEELMSQVRDQSGPTLQQNGVSGLNSHVDTYNLENLEEDMYLEINDLMEPEPEPTSVEVMENNWNEDGSGLLNDDDFVGADSYFLDLGVTNPQLDFVSGDLKNGFAQSLQVNTSLMTYQANNNQFQQQSGKNQASNWPLRNSYTRQINNGSSWVQELNNDGLTVTRFGEAPGTGDSSEFLNPVPSGISTTNEDDPSKDESSKFASSVWTFLESIPAKPAYASENPFVKLNLVRMSTSGGRFRFTSKSTGNNVVVMDSDSAVKRNKSGGNNDKKKKKNKGFFCLSIIGALCALFWVIIGTMGGSGRPLLW | null | null | mitochondria-nucleus signaling pathway [GO:0031930]; positive regulation of cellular response to oxidative stress [GO:1900409]; response to red light [GO:0010114]; response to UV-B [GO:0010224] | cytoplasm [GO:0005737]; endoplasmic reticulum membrane [GO:0005789]; nucleus [GO:0005634] | DNA-binding transcription factor activity [GO:0003700]; transcription cis-regulatory region binding [GO:0000976] | PF02365; | 2.170.150.80; | null | null | SUBCELLULAR LOCATION: Endoplasmic reticulum membrane {ECO:0000269|PubMed:24045019}; Single-pass membrane protein {ECO:0000255}. Nucleus {ECO:0000255|PROSITE-ProRule:PRU00353, ECO:0000269|PubMed:24045019}. Note=Localized primarily in endoplasmic reticulum membrane as dormant form and, upon oxidative stress, is processed into a transcriptionally active and nuclear form after a proteolytic cleavage through regulated intramembrane proteolysis (RIP). {ECO:0000269|PubMed:24045019}. | null | null | null | null | null | FUNCTION: Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). Involved in oxidative stress tolerance by mediating regulation of mitochondrial retrograde signaling during mitochondrial dysfunction. Interacts directly with the mitochondrial dysfunction DNA consensus motif 5'-CTTGNNNNNCA[AC]G-3', a cis-regulatory elements of several mitochondrial retrograde regulation-induced genes, and triggers increased oxidative stress tolerance. {ECO:0000269|PubMed:24045019}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IEM5 | GCR2_ARATH | MGERFFRNEMPEFVPEDLSGEEETVTECKDSLTKLLSLPYKSFSEKLHRYALSIKDKVVWETWERSGKRVRDYNLYTGVLGTAYLLFKSYQVTRNEDDLKLCLENVEACDVASRDSERVTFICGYAGVCALGAVAAKCLGDDQLYDRYLARFRGIRLPSDLPYELLYGRAGYLWACLFLNKHIGQESISSERMRSVVEEIFRAGRQLGNKGTCPLMYEWHGKRYWGAAHGLAGIMNVLMHTELEPDEIKDVKGTLSYMIQNRFPSGNYLSSEGSKSDRLVHWCHGAPGVALTLVKAAQVYNTKEFVEAAMEAGEVVWSRGLLKRVGICHGISGNTYVFLSLYRLTRNPKYLYRAKAFASFLLDKSEKLISEGQMHGGDRPFSLFEGIGGMAYMLLDMNDPTQALFPGYEL | null | null | abscisic acid-activated signaling pathway [GO:0009738]; carbohydrate metabolic process [GO:0005975]; maintenance of seed dormancy [GO:0010231]; peptide modification [GO:0031179]; regulation of abscisic acid-activated signaling pathway [GO:0009787] | extrinsic component of membrane [GO:0019898]; plasma membrane [GO:0005886] | abscisic acid binding [GO:0010427]; metal ion binding [GO:0046872] | PF05147; | 1.50.10.10; | LanC-like protein family | null | null | null | null | null | null | null | FUNCTION: May play a role in abscisic acid (ABA) signaling. {ECO:0000269|PubMed:17347412, ECO:0000269|PubMed:17894782, ECO:0000269|PubMed:18714360, ECO:0000269|PubMed:19286934}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IF36 | FGT1_ARATH | MTQSPVQPPPPLPAQPHSAAGGVIRGDVQVRCAGCRVILRVKTGVVEFSCPTCQLPQMLPPELLSRARPQFPQSPQQPPQPIQTLPPPIQQQLKPLNLPRPPVPAHGIDPTKMQLPCANCQAILNVPHGLTRFSCPQCHVELAVDVSKLNRSLTASQSHSNPPTPAAPTVPPPPPPEEVNEEAIEVEREEDEGGTAGETFMDYRPPKLSIGPPHPDPIVETSSLSAVQPPEPTYDLKIKEELERSKALSCLQIETLVYACQRHLQHLADGTRAGFFVGDGAGVGKGRTIAGLIWENWKHGRRKALWISIGSDLKYDARRDLDDVGATCVGVNPLNKLPYSKLDSKNVGIKEGVVFLTYNSLIASSEKGRSRLQQLVQWCGPEFDGLLIFDECHKAKNLVPEAGSQPTRIGQAVVDIQDKIPQARVIYCSATGASEPRNMGYMVRLGLWGAGTSFSDFNKFLGALDKGGTGALELVAMDMKARGMYVCRTLSYKGAEFEIVEARLEAGMEAMYNKSAEFWAELRIELLSASAFLPNEKPNSSQLWRLYWSSHQRFFRHLCMSAKVPVTVRLAKKALSTNKCVVIGLQSTGEARTEEAVNKYGLELDDFVSGPRELLLKFVEENYPLPEQPEPLSEDDSVKELQRKRHSASPGVSIRGRVRKMAKWKPDSDNESDLESEADSADDSNDSDDEFQICQICSGEDERKKLLHCSECDKLFHPDCVVPPVIDLPSEAWICFSCKEKTEEYIQARRLYIAELQKRYEAALERKSKIIEIIRSLNLPNNPLDDIVDQLGGPEKVAEMTGRRGMLVRASNGKGVTYQARNTKDITMEMVNMHEKQLFMDGKKLVAIISEAGSAGVSLQADRRAVNQKRRVHLTLELPWSADRAIQQFGRTHRSNQTSAPEYRLLFTNLGGERRFASIVAKRLETLGALTQGDRRAGPSGPSLSAYNYDSNFGKKSLMVMYRGIMEQEKLPVLPPGCSIDEPETVKEFLTKARAALVAVGIVRDSVLANGKDVGRFSGRIIDSDMHDVGRFLNRLLGLPPDIQNRLFELFTSILDVLVHNARIEGSFDSGIVDMKANSVELLSTPKTVHVDQMSGASTMLFTFTLDRGVTWESASSMLEGKRRDGLGSANDGFFESKREWLGRRHFILAFESAASGLFKIVRPAVGESIREMSLSELKTKYRKLSSLEKARTGWEDEYEVSSKQCMHGPKCKLGEYCTVGRRIQEVNVVGGLILPIWGTIEKALSKQARHSHKRIRVIRIETTTDNQRIVGLSIPNAAVETVLQDLAWVQEIDD | null | null | chromatin remodeling [GO:0006338]; epigenetic regulation of gene expression [GO:0040029]; heat acclimation [GO:0010286]; positive regulation of cellular response to heat [GO:1900036]; regulation of DNA-templated transcription [GO:0006355]; response to heat [GO:0009408] | nucleus [GO:0005634] | chromatin DNA binding [GO:0031490]; histone binding [GO:0042393]; metal ion binding [GO:0046872]; promoter-specific chromatin binding [GO:1990841] | PF13872;PF13871;PF00628; | 3.40.50.300;3.30.40.10; | SBNO family | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00768, ECO:0000269|PubMed:27680998}. | null | null | null | null | null | FUNCTION: Required for normal embryo development (PubMed:15266054, PubMed:18684657). Necessary to acquire heat stress (HS) memory, by modulating nucleosome occupancy and regulating heat-induced gene expression. Associates globally with the nucleosome-poor regions flanking the transcription units of expressed genes. Binds to the promoter regions, primarily to the proximal promoter just upstream of the transcriptional start sites (TSS) and somewhat more weakly to the region downstream of the transcription termination site (TTS), of actively expressed genes (e.g. HSA32, HSP18.2 and HSP22.0) in a heat-dependent fashion (PubMed:27680998). {ECO:0000269|PubMed:15266054, ECO:0000269|PubMed:18684657, ECO:0000269|PubMed:27680998}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IFN6 | DPOE2_ARATH | MSGRRCDRRLNVQKVSAADELETKLGFGLFSQGETRLGWLLTFASSSWEDADTGKTFSCVDLFFVTQDGSSFKTKYKFRPYLYAATKDNMELEVEAYLRRRYERQVADIQIVHKEDLYLKNHLSGLQKKYLKVSFDTVQQLVEVKRDLLHIVERNLAKFNALEAYESILSGKREQRPQDCLDSVVDLREYDVPYHVRFAIDNDVRSGQWYNVSISSTDVILEKRTDLLQRAEVRVCAFDIETVKLPLKFPDAEYDQIMMISYMVDGQGFLITNRECVGKDIEDLEYTPKPEFEGYFKVTNVTNEVELLRKWFSHMQELKPGIYVTYNGDFFDWPFIERRASHHGIKMNEELGFRCDQNQGECRAKFVCHLDCFSWVKRDSYLPQGSQGLKAVTKVKLGYDPLEVNPEDMVRFAMEKPQTMASYSVSDAVATYYLYMTYVHPFVFSLATIIPMVPDEVLRKGSGTLCEMLLMVEAYKANVVCPNKNQADPEKFYQGKLLESETYIGGHVECLQSGVFRSDIPTSFKLDASAYQQLIDNLGRDLEYAITVEGKMRMDSVSNFDEVKEVIREKLEKLRDDPIREEGPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNGPEKTCLRKLEWVWRGVTFKGNKSEYYHLKKQIESESVDAGANMQSSKPFLDLPKVEQQSKLKERLKKYCQKAYSRVLDKPITEVREAGICMRENPFYVDTVRSFRDRRYEYKTLNKVWKGKLSEAKASGNLIKIQEAHDMVVVYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIERIGKPLELDTDGIWCALPGSFPENFTFKTIDMKKFTISYPCVILNVDVAKNNSNDQYQTLVDPVRKTYNSRSECSIEFEVDGPYKAMIIPASKEEGILIKKRYAVFNHDGTIAELKGFEMKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVAAVANRWLDLLEGQGKDIADSELLDYISESSTMSKSLADYGQQKSCAVTTAKRLADFLGDTMVKDKGLRCQYIVAREPEGTPVSERAVPVAIFQTDDPEKKFYLQKWCKISSYTGIRSIIDWMYYKQRLHSAIQKVITIPAAMQKVANPVLRVRHPYWLEKKVCDKFRQGKIVDMFSSANKDHSTTQDNVVADIEEFCKENRPSVKGPKPVARSFEVDRNHSEGKQQESWDPEFHDISLQNVDKNVDYQGWLELEKRKWKMTLTNKKKRRYSSSLFGFDLEQNINKKVCKGRVGVGSYFRRPEEALTSSYLQIIQLVQSPQSGQFFAWVVVEGLMLKIPLTIPRVFYINSKASIAGNFTGKCINKILPHGKPCYNLMEVNIQEDQFIKESKKLAALLADPEIEGIYETKMPLEFSAICQIGCVCKIEDTAKHRNTQDGWKLGELHRITTTECRYLENSIPLVYLYHSTSTGRAVYVLYCHASKLMSVVVVNPYGDKELLSSALERQFRDRCQELSPEPFSWDGILFQVEYVDHPEAATKFLQKALCEYREENCGATVAVIECPDFNTTKEGVKALEDFPCVRIPFNDDDNSYQPVSWQRPAAKIAVLRCASAIQWLDRRIAQSRYAHVPLGNFGRDWLTFTVDIFLSRALRDQQQVLWVSDNGVPDLGDINNEETFLADETSLLFPGAYRKVSVELKVHRLAVNALLKSDLVSEMEGGGFLGVNSRGSSLNDNGSFDENNGCAQAFRVLKQLIKRLLHDACNSGNIYADSILQHLSWWLRSPSSKLHDPALHLMLHKVMQKVFALLLTDLRRLGAIIIYADFSKVIIDTGKFDLSAAKTYCESLLTVMGSRDIFKLILLEPVHYWHSLLFMDQHNYAGIRATGDEISGNEVTIEPKWSVARHLPEYIQKDFIIIVATFIFGPWKFALEKKRGSAESLEAEMVEYLKEQIGTRFISMIVEKIGNIRSHIKDINVSDASWASGQAPKGDYTFEFIQIITAVLALDQNVQQDVLVMRKILLKYIKVKECAAEAEFIDPGPSFILPNVACSNCGAYRDLDFCRDSALLTEKEWSCADPQCVKIYDKEQIESSIIQMVRQRERMYQLQDLVCNRCNQVKAAHLTEQCECSGSFRCKESGSDFHKRIEIFLDIAKRQKFRLLEECISWILFATSC | 2.7.7.7 | COFACTOR: Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; Evidence={ECO:0000250|UniProtKB:P15436}; Note=Binds 1 [4Fe-4S] cluster. {ECO:0000250, ECO:0000250|UniProtKB:P15436}; | base-excision repair, gap-filling [GO:0006287]; DNA replication proofreading [GO:0045004]; leading strand elongation [GO:0006272]; mitotic cell cycle [GO:0000278]; nucleotide-excision repair, DNA gap filling [GO:0006297] | epsilon DNA polymerase complex [GO:0008622] | 4 iron, 4 sulfur cluster binding [GO:0051539]; DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; nucleotide binding [GO:0000166]; single-stranded DNA 3'-5' DNA exonuclease activity [GO:0008310]; zinc ion binding [GO:0008270] | PF00136;PF03104;PF08490; | 1.10.132.60;3.30.342.10;3.90.1600.10;3.30.420.10; | DNA polymerase type-B family | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. | CATALYTIC ACTIVITY: Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339, Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560, ChEBI:CHEBI:173112; EC=2.7.7.7; Evidence={ECO:0000250|UniProtKB:P15436}; | null | null | null | null | FUNCTION: DNA polymerase II, which participates in chromosomal DNA replication (By similarity). Involved in the determination of cell fate during plant embryogenesis. Contributes to the flowering time repression. {ECO:0000250, ECO:0000269|PubMed:16212602, ECO:0000269|PubMed:16278345, ECO:0000269|PubMed:19947980}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IGZ2 | SMXL8_ARATH | MPTAVNVAKQCLTAEASYALEEAVNVARRRGHSQTTSLHAISALLSLPTSVLRDACARVRNSAYSPRLQFKALDLCLSVSLDRIQSGHQLGSDDSPPVSNSLMAAIKRSQAHQRRLPENFRIYQEMSQSQNQNSLSCVKVELRQLILSILDDPVVSRVFGEAGFRSSELKLSIIRPVPHLLRYSSQQPLFLCNLTGNPEPNPVRWGFTVPSLNFNGDLDYRRISAVFTKDKGRNPLLVGVSAYGVLTSYLNSLEKNQTDGMILPTKLHGLTAVNIGSEISDQISVKFDKTYTDTRFHDLGKLAEQGSGPGLLLHYGDLRVFTNGEGNVPAANYIVNRISELLRRHGRRVWLIGATTSNEVYEKMMRRFPNVEKDWDLQLLTITSLKPCLPHNKSSLIGSFVPFGGFFSTTPSELKLPFSGFKTEITGPVSSISDQTQSTLPPWLQMTTRTDLNQKSSAKVVQTKEGLESVCGNKFTSSASASTCSAKSVTTDLNLRVSSVTTGSGLKKHLDSKDFSQPQSVSSYSFDNPRDLNAESFKIIYRRLTDMVSGQDEAARVISCALSQPPKSVTRRDVWLNLVGPDTVGKRRMSLVLAEIVYQSEHRFMAVDLGAAEQGMGGCDDPMRLRGKTMVDHIFEVMCRNPFCVVFLENIEKADEKLQMSLSKAIETGKFMDSHGREVGIGNTIFVMTSSSQGSATTTSYSEEKLLRVKGRQVEIRIETVSSLPMVRSVYGPTSVNKRKLMGLGNLQETKDTVESVKRLNRTTNGVLDLNLPAQETEIEEKYHCEENSNVWLMNLKNHKRLIEVPFKPFDFEGLAEKIKKSVKENFDKCVRSDCLLEVDPKIIERLLAAVYFSDSRKDIKELLENIMSPVFLRIKERYEITTSCVVKLVGRDLDIFLEDQMDLFFVKSQ | null | null | response to strigolactone [GO:1902347] | nucleus [GO:0005634] | ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887] | PF07724; | 1.10.1780.10;3.40.50.300; | ClpA/ClpB family | PTM: Ubiquitinated upon strigolactone treatment (PubMed:26546446). Probable proteolytic target of SCF(MAX2)-mediated stigolactone signaling (PubMed:26546447). {ECO:0000269|PubMed:26546446, ECO:0000269|PubMed:26546447}. | SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:26546446}. | null | null | null | null | null | FUNCTION: Probable component of a transcriptional corepressor complex involved in branching control. Regulates cotyledon expansion and lateral root growth, but not germination or hypocotyl elongation. Promotes auxin transport and PIN1 accumulation in the stem and represses BRC1/TCP18 expression in axillary buds (PubMed:26546446, PubMed:26546447). {ECO:0000269|PubMed:26546446, ECO:0000269|PubMed:26546447}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IH25 | BOP1_ARATH | MTKRSKGANEDKLIETKSKNVSGKSQKQKKPVEAESLKEEDLLQASGTDSDYDGDSLPGSLNSDDFDSDFSDSEDDGTHEGTEDGDVEFSDDDDVLEHDGSIDNEDDDGSEHVGSDNNEEHGSDEDSERGEAVEESDSSEDEVPSRNTVGNVPLKWYEDEKHIGYDLTGKKITKKEKQDKLDSFLATIDDSKTWRKIYDEYNDEDVELTKEESKIVQRILKGEAPHADFDPYAPYVEWFKHDDAIHPLSSAPEPKRRFIPSKWEAKKVVKIVRAIRKGWIKFDKPEEEPNVYLLWGDDSTSDQKSKHLTYIPPPKLKLPGHDESYNPSLEYIPTEEEKASYELMFEEDRPKFIPTRFTSLRSIPAYENALKESFERCLDLYLCPRVRKKRINIDPESLKPKLPSRKDLRPYPNSCYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVAWNPLSRLPVLAVAMGRDLFFLNTELGTDEEQEITKERLHSGNIPEPDASVAAIVTWLPDELYGGIKIRHFKSISSIDWHRKGDYLSTVMASGETRGVVLHQLSKQKTQRLPFKIRGLPVCTLFHPSLSYFFVATRKDVRVYNLLKPGEATKKLETGLREISSMAIHPGGDNLIVGSKEGKMCWFDMDLSSKPYKTLKNHPKDITNVAVHRSYPLFASCSEDSTAYVFHGMVYNDLNQNPLIVPLEILRGHSSKGGVLDCKFHPRQPWLFTAGADSIIKLYCH | null | null | gamete generation [GO:0007276]; maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000466]; maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000463]; regulation of cell division [GO:0051302] | nucleolus [GO:0005730]; nucleoplasm [GO:0005654]; PeBoW complex [GO:0070545]; preribosome, large subunit precursor [GO:0030687] | ribonucleoprotein complex binding [GO:0043021] | PF08145;PF00400; | 2.130.10.10; | WD repeat BOP1/ERB1 family | null | SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000255|HAMAP-Rule:MF_03027, ECO:0000269|PubMed:23909681, ECO:0000269|PubMed:25443833}. Nucleus, nucleoplasm {ECO:0000255|HAMAP-Rule:MF_03027}. | null | null | null | null | null | FUNCTION: Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (By similarity). Plays an essential role in cell growth and survival through its regulation of ribosome biogenesis and mitotic progression (PubMed:26940494). {ECO:0000255|HAMAP-Rule:MF_03027, ECO:0000269|PubMed:26940494}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IH31 | CAN2_ARATH | MGNALTFLYGKCCKPTTTDDSLGPHGVSAATVGVSALAHDLFNFEITSQVPEGLGRYVQSSRKAQANWYRKILEAWKQAKPPPQTAEEASRLVTDILKRNQKADVEGLLSFYGLPLSHTLVEVTVEAPVSLPEGILFEFQTLPVDPKAVADGDTITVYVSTSEPVVSSSVPREVNLAAVQRAKAREKRNYPKADELHQKIIDSGYRVLNIENEEVLARKFRIRLRGIDAPESQMPFGKEAQEGLLKIVGRKSLKVLVYGEDQYGRCVGDLYCNGIFVQEAMLKKGLAWHYLAYDKRPVLAKWEKEARQKRIGLWASSNPEKPWDWRKNNRRE | 3.1.31.- | COFACTOR: Name=Ca(2+); Xref=ChEBI:CHEBI:29108; Evidence={ECO:0000305}; Note=Binds 1 Ca(2+) ion per subunit. {ECO:0000305}; | DNA catabolic process [GO:0006308]; RNA catabolic process [GO:0006401] | mitochondrion [GO:0005739]; plasma membrane [GO:0005886] | DNA endonuclease activity [GO:0004520]; metal ion binding [GO:0046872]; RNA endonuclease activity [GO:0004521] | PF00565; | 2.40.50.90; | Thermonuclease family | null | SUBCELLULAR LOCATION: Cell membrane {ECO:0000305|PubMed:23102437, ECO:0000305|PubMed:24076026}; Lipid-anchor {ECO:0000305|PubMed:23102437, ECO:0000305|PubMed:24076026}. | null | null | null | BIOPHYSICOCHEMICAL PROPERTIES: pH dependence: Optimum pH is 7.0-8.0. {ECO:0000269|PubMed:22450164}; | null | FUNCTION: Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond. Possesses activity toward the single-stranded DNA, double-stranded DNA and RNA. May be involved in genomic DNA degradation during programmed cell death. {ECO:0000269|PubMed:22450164, ECO:0000269|PubMed:23102437, ECO:0000269|PubMed:24076026}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IHS2 | SYD_ARATH | MTSSSHNIELEAAKFLHKLIQDSKDEPAKLATKLYVILQHMKTSGKENTMPYQVISRAMDTVVNQHGLDIEALKSSCLPHPGGTQTEDSGSAHLAGSSQAVGVSNEGKATLVENEMTKYDAFTSGRQLGGSNSASQTFYQGSGTQSNRSFDRESPSNLDSTSGISQPHNRSETMNQRDVKSSGKRKRGESSLSWDQNMDNSQIFDSHKIDDQTGEVSKIEMPGNSGDIRNLHVGLSSDAFTTPQCGWQSSEATAIRPAIHKEPGNNVAGEGFLPSGSPFREQQLKQLRAQCLVFLALRNGLVPKKLHVEIALRNTFREEDGFRGELFDPKGRTHTSSDLGGIPDVSALLSRTDNPTGRLDEMDFSSKETERSRLGEKSFANTVFSDGQKLLASRIPSSQAQTQVAVSHSQLTFSPGLTKNTPSEMVGWTGVIKTNDLSTSAVQLDEFHSSDEEEGNLQPSPKYTMSQKWIMGRQNKRLLVDRSWSLKQQKADQAIGSRFNELKESVSLSDDISAKTKSVIELKKLQLLNLQRRLRSEFVYNFFKPIATDVEHLKSYKKHKHGRRIKQLEKYEQKMKEERQRRIRERQKEFFGGLEVHKEKLEDLFKVRRERLKGFNRYAKEFHKRKERLHREKIDKIQREKINLLKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSKLKEAKLLTSRFENEADETRTSNATDDETLIENEDESDQAKHYLESNEKYYLMAHSIKENINEQPSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLLMKRVEDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRKEYLESLLRESKKEEDAPVLDDDALNDLIARRESEIDIFESIDKQRKENEMETWNTLVHGPGSDSFAHIPSIPSRLVTEDDLKLLYETMKLNDVPMVAKESTVGMKRKDGSMGGLDTHQYGRGKRAREVRSYEEKLTEEEFEKLCQTESPDSPQGKGEGSERSLANDTSNIPVENSSDTLLPTSPTQAITVQPMEPVRPQSHTLKEETQPIKRGRGRPKRTDKALTPVSLSAVSRTQATGNAISSAATGLDFVSSDKRLEAASHPTSSLALTSPDLSGPPGFQSLPASPAPTPIRGRGRGRSRGRGAGRGRRVEGVLHGSNSSITQRTETATSLASDAEATKFALPRSASEIVSRVPKANEGSTSNPDQVSPVHSATTALRSDKAADKDLDAPPGFDSGSHVQTLNVLENSSERKAFAVKKRPLIQGVSSQHPGPNKQPLDLPVSTSSTLLGGGPVQNQNAVSSVCDGSKSPSEGRTYTALQGVTTAPSDATLPMSSQPSDATLPMSSQPVGSTVEAQEANVPSLPAALPAKRRVRNLPSRGETPKRQGKRRGQPLPATDASSARSTGLTPQIEVKVGNLSGTKAKFDAVAKEQPHFSQSVAPDIHSSGSLSQEIRRDTSGTGGSARKQTADVTDVARVMKEIFSETSLLKHKVGEPSATTRTNVPDAQSPGEMNLHTVETHKAEDSSGLKNQEALYNLSKADKLVSDIPHPVPGDLTTSGSVANKDVDIGSSKVAAENELVKIPGGDVDSSVIQLSLGNTLTAKSSLEKCTADQLLGEKLSQEGETTPASDGETCHLAEETASSLSYVRSEPTASASTTAEPLPTDKLEKNISFQDEVKTLNGDKREAILLSSEEQTNVNSKIETNSEELQASRTDEVPHVDGKSVDVANQTVKEDEAKHSVEIQSSMLEPDELPNAGQKGHSSIDLQPLVLVTSNENAMSLDDKDYDPISKSADIEQDPEESVFVQGVGRPKVGTADTQMEDTNDAKLLVGCSVESEEKEKTLQSLIPGDDADTEQDPEESVSDQRPKVGSAYTQMEDTDEAKLLMGCSVESEEKEKTLQSHIPGDDADTEKNPEESVSVQGVDRPKVGTTDTQMEDTNDAKLLVGCSVASEEKEKTLQSHIPGDDADTEQNPEESVSVQGVNRPKVGNANTQMEDTDEAKVLVGCSVESEEKEKTLQSHIPGDDADTEQNPEESVSNFDRPKDGTADTHMEDIDDAKLLVGCSVESEEKEKSLQSHMPSDDAVLHAPFENTKDSKGDDLHGESLVSCPTMEVMEQKGFESETHARTDSGGIDRGNEVSENMSDGVKMNISSVQVPDASHDLNVSQDQTDIPLVGGIDPEHVQENVDVPASPHGAAPNIVIFQSEGHLSPSILPDDVAGQLESMSNDEKTNISSEQVPDVSHDLKVSQDQTDIPPVGGIVPENLQEIVDVPASPHGVVPDVVVSQSEEIQSPSILPDDVPGQPDDGNCEKMDTMQNNTSIDIGITSGKTCQPSSSTQPEDENRNSLSHCEPSEVVEQRDSRDQVCIGSVESQVEISSAILENRSADIQPPQSILVDQKDIEESKEPGIESADVSLHQLADIQAEPSNLVDQMDIEESKEPGTESADVSLHQLADIQPGPSILVDQMDTEKSKEPGTESADVSLHQLADIQPGPSILVDQMDTEKSKEPGTESADVSLHQLADIQPGPSILVDQMDTEEFKNPDVSLHQLADIEPSLSISAVQKNIEDKDQSHVETAGSELVDVSAECSTEPQVQLPPSSEPVGDMHVHLGASKSEIVAEGTDFSSSLPKTEEENAKSQLADTEPSSSLTAVQKNIEDQVETAGCEFVVVSTGCSTEPQVQLPPSAEPVVAEGTEFPSSLLMTGVDNSSHLMTGVDNAKTHLADVVPSSSPTTMEKNIEAQDQDQVTTGGCGLVDVLTECSSEPQLQLPPSAEPVISEGTELATLPLTEEENADSQLANIEPSSSPSVVEKNIEAQDQDQVKTAGCELVSTGCSSEPQVHLPPSAEPDGDIHVHLKETEKSESMVVVGEGTAFPSSLPVTEEGNAESQLADTEPFTSPTVVEKNIKDQEQVETTGCGLVDDSTGCSSEPQVQLPPSAEPMEGTHMHLEETKKSETVVTEIQLADIDPSFSLIVVQTNIEDQDQIETGGCDLINVPSGCSTEPQIQLSSSAEPEEGMHIHLEAAMNSETVVTEGSELPSSLPMTEDENADGQLAEVEPSVSLTVEQTNIEEKDHIETAECELVDVSPGCSSQPEVKFPPSPDAVGGMDVHLETVVTEDTDSNSSLPKTEEKDAENPSDRLDGESDGTTVATVEGTCVESNSLVAEESNIEVPKDNEDV | 3.6.4.- | null | defense response [GO:0006952]; epigenetic regulation of gene expression [GO:0040029]; ethylene-activated signaling pathway [GO:0009873]; flower development [GO:0009908]; organ boundary specification between lateral organs and the meristem [GO:0010199]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of defense response to fungus [GO:1900150]; regulation of ethylene-activated signaling pathway [GO:0010104]; regulation of jasmonic acid mediated signaling pathway [GO:2000022]; response to wounding [GO:0009611] | cytosol [GO:0005829]; nucleus [GO:0005634] | ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent chromatin remodeler activity [GO:0140658]; chromatin binding [GO:0003682]; DNA binding [GO:0003677]; helicase activity [GO:0004386]; histone binding [GO:0042393] | PF00271;PF14619;PF00176; | 3.40.50.300;3.40.50.10810; | SNF2/RAD54 helicase family | PTM: Phosphorylated. | SUBCELLULAR LOCATION: Cytoplasm. Nucleus. | null | null | null | null | null | FUNCTION: Catalytic component of the chromatin structure-remodeling complex (RSC), which is involved in transcription regulation and nucleosome positioning. Controls stem cell fate via the transcription regulation of WUS in the shoot apical meristem, by modulating its promoter. LFY-dependent repressor of the meristem identity switch from vegetative to reproductive development probably by modulating chromatin state. Involved in the regulation of floral homeotic gene expression in response to environmental stimuli. Required for carpel and ovule development, and for cotyledon separation via the regulation of CUC2 transcription. Regulates the promoters of several genes downstream of the jasmonate (JA) and ethylene (ET) signaling pathways. Required for resistance against the necrotrophic pathogen B.cinerea but not the biotrophic pathogen P.syringae. {ECO:0000269|PubMed:11818058, ECO:0000269|PubMed:15833920, ECO:0000269|PubMed:16640604, ECO:0000269|PubMed:16854978, ECO:0000269|PubMed:17293567, ECO:0000269|PubMed:19079584, ECO:0000269|PubMed:22323601}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IHS9 | UXT1_ARATH | MGEMKSMQMGVIGALFLSVASSVSIVICNKALMTNLGFPFATTLTSWHLMVTYCTLHVAYKLNFFENKPIDMRTVVLFGLLNGISIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFLNKKFSQKIKFSLFLLLVGVGIASITDLQLNFVGSVLSLLAIATTCVGQILTNTIQKRLNVTSTQLLYQSAPFQAAILFVSGPFVDKYLTSLNVFSFHYSPIVVGFITLSCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYTLLHDPFTPRNIAGILIAVLGMLLYSYFCSVASKSKQASSDSTFLGKDRDTTPLLGQENENHHEAKKLDKHSPV | null | null | plant-type secondary cell wall biogenesis [GO:0009834]; regulation of pectin biosynthetic process [GO:1900030]; UDP-xylose transmembrane transport [GO:0015790] | endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]; Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139] | antiporter activity [GO:0015297]; UDP-xylose transmembrane transporter activity [GO:0005464] | PF03151; | null | TPT transporter family, TPT (TC 2.A.7.9) subfamily | null | SUBCELLULAR LOCATION: Golgi apparatus membrane {ECO:0000269|PubMed:25804536}; Multi-pass membrane protein {ECO:0000255}. Endoplasmic reticulum membrane {ECO:0000269|PubMed:25804536}; Multi-pass membrane protein {ECO:0000255}. | null | BIOPHYSICOCHEMICAL PROPERTIES: Kinetic parameters: KM=39 uM for UDP-Xylose {ECO:0000269|PubMed:25804536}; Vmax=16 nmol/sec/mg enzyme toward UDP-Xylose {ECO:0000269|PubMed:25804536}; | null | null | null | FUNCTION: Nucleotide-sugar transporter that transports UDP-xylose and UMP in a strict counter-exchange mode. {ECO:0000269|PubMed:25804536}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IHY7 | PTA12_ARATH | MASISTTTWLYRGQVCTDSGKSSNCIVQRRVKCGFPLKTLHAGITSRDRSLRHCIKCKKEDGDGDVSEGSKKSEEGFEYVTVERHPYHSYMDSTSGKLEPASGARASIPGEDYWPEGTSSRVRAARAPQPAGESSSFPSYGKNPGSRRKKNRKATEENVTVETNDEVSDSEDSSEEEENDSSDGFVTYKNEFEREEEETGFELDKKLGRPHPFIDPTKKKQIEKTLTSDESWWNWRKPEKEQWSRWQRRRPDVETVFLKAMAETGQVKLYGEEPTLTETSLYRARRHLFKEERLQAERERLAKEGPMAFYSEWVKAWKRDTSREAVQKHFEETGEDENTQLIEMFSHQTDREYRIMMGTDIRIKRDPLAMRMREDQIKQIWGGDPVYPTINYIQDPNAVMDFRGPDFHEPTPNMLSYLKENGKVISREMHEALLTKEKTEQLEVPDMDDAMAQAVDIGENDDDEDDADVEKDDEKVPRNWSVLKETPELRTAKPKPKKEGRMSLDEAVDDAENLTDFLMDFEEETDP | null | null | plastid transcription [GO:0042793]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of red or far-red light signaling pathway [GO:0090228]; positive regulation of thermomorphogenesis [GO:0140922]; protein catabolic process [GO:0030163]; red, far-red light phototransduction [GO:0009585]; regulation of plant organ morphogenesis [GO:1905421]; regulation of transcription by RNA polymerase II [GO:0006357]; response to blue light [GO:0009637]; response to cytokinin [GO:0009735]; response to far red light [GO:0010218]; response to light stimulus [GO:0009416]; response to red light [GO:0010114]; response to temperature stimulus [GO:0009266]; response to UV [GO:0009411]; UV protection [GO:0009650] | chloroplast [GO:0009507]; chloroplast nucleoid [GO:0042644]; nucleus [GO:0005634]; plastid-encoded plastid RNA polymerase complex [GO:0000427] | transcription regulator activator activity [GO:0140537] | null | null | null | null | SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000269|PubMed:16326926, ECO:0000269|PubMed:20603003}. Nucleus {ECO:0000269|PubMed:20603003, ECO:0000269|PubMed:22895253}. Note=Localizes to subnuclear domains in the nucleolus and in the nucleoplasm, and in chloroplasts. {ECO:0000269|PubMed:20603003}. | null | null | null | null | null | FUNCTION: Involved in plastid gene expression (PubMed:16326926). Acidic transcriptional coactivator necessary for the transactivation of many PIFs target genes (class B genes), particularly during the regulation of hypocotyl growth (PubMed:25944101). Plays dual opposite roles in regulating hypocotyl growth, preventing it in red and far-red conditions, but promoting it otherwise (PubMed:25944101). Required in the nucleus for the initiation of photomorphogenesis mediated by phytochromes (PHYs) (e.g. PHYA and PHYB) by mediating PHYs localization to photobodies, especially in response to red and far-red light, and implicating phytochrome nuclear bodies as sites of proteolysis for PHYs and PIFs proteins (e.g. PIF1 and PIF3) (PubMed:20603003, PubMed:22895253, PubMed:25944101). Acts downstream of PHYs and upstream of DET1 (PubMed:20603003, PubMed:22895253). Involved in UV tolerance in both roots and hypocotyls, specifically in dark conditions (PubMed:29283431). Element of a PIF4/HMR/MED14-dependent thermoresponsive process; acts as a PIF4 transcriptional coactivator to trigger the thermoresponsive growth-relevant genes (e.g. mainly involved in biosynthesis and signaling of the phytohormone auxin) and promote warm-temperature-dependent (e.g. 27 degrees Celsius) PIF4 and MED14 stabilization and accumulation, being more prominently involved in long days (LD) and continuous red light (Rc) than in short days (SD), thus modulating warm temperature elicitation of MED14-dependent thermomorphogenesis (e.g. hypocotyl elongation) (PubMed:30635559, PubMed:33824329, PubMed:36063057). {ECO:0000269|PubMed:16326926, ECO:0000269|PubMed:20603003, ECO:0000269|PubMed:22895253, ECO:0000269|PubMed:25944101, ECO:0000269|PubMed:29283431, ECO:0000269|PubMed:30635559, ECO:0000269|PubMed:33824329, ECO:0000269|PubMed:36063057}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IIM1 | CSI1_ARATH | MTSALGWRFPSTNGNGLAPSDTERNGDMKMHDSEPPTPHSTTKMSLRDRTTSMEDPDGTLASVAQCIEQLRQGSSSAQEREYCLKQLLDLIEMRENAFSAVGSHSQAVPVLVSLLRSGSVGVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSVEGQIAAAKTIYAVSEGGVKDHVGSKIFSTEGVVPVLWDQLRSGNKKGEVDGLLTGALKNLSSTTEGFWSETIRAGGVDVLVKLLTSGQSSTLSNVCFLLACMMMEDASVCSSVLTADITKQLLKLLGSGNEAPVRAEAAAALKSLSAQSKEAKREIANSNGIPVLINATIAPSKEFMQGEYAQALQENAMCALANISGGLSYVISSLGQSLESCSSPAQTADTLGALASALMIYDGKAETTRASDPLVVEQTLLKQFKPRLPFLVQERTIEALASLYGNSILSVKLSNSDAKRLLVGLITMAVNEVQDELVKALLMLCNHEGSLWQALQGREGIQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSAKAREDSATILRNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKIYVLDALKSMLSVVPFNDMLREGSASNDAIETMIKLMSSGKEETQANSASALAAIFQSRKDLRESALALKTLLSAIKLLNVDSERILVESCRCLAAILLSIKENRDVAISAREALPTIVSLANSSVLEVAEQGMCALANLILDSEVSEKVIVEDIILSATRILREGTVSGKTLAAAAIARLLSRRRIDSALTDSVNRAGTVLTLVSLLESADGRSDAISEALDALAIFSRSGANGNVKPAWAVLAESPNSMAPIVSSIVSVANPSLQDKAIEVLSRLCRDQPIVLGNMVNNARDCVSSIAKRVINTRDPKIKIGGAAIIICAAKVDDQKMIENLNETQLCAKFVQALVGILDSVQDQEKDEKDKICICIHPKEKEEDEEEEATENREGSTGATVISGDNLAIWLLSVLSCHDEKSRAVILESEGIELITDRIGNRFLQADNGEDANIWVCALLLAILFQDREITRAHATMKAVPVLSNLVKSEEYADRYFAAQALASLVCNGSRGTLLSVANSGAAAGFISLLGCSDDDIKELLQLSQEFTLVRYPDQVALERLFRVEDIRVGATSRKAIPLLVELLKPIPDRPGAPLLSLNLLTQLAGDCPQNMIVMVESGALEGLSKYLSLGPQDEQEEAATGLLGILFSSAEIRRHESAFGAVSQLVAVLRLGGRGARYSAAKALDSLFTADHIRNAESSRQAVQPLVEILNTGSEREQHAAIAALVRLLSDNPSRALAVADVEMNAVDVLCRILSSNYTMELKGDAAELCYVLFANTRIRSTVAAARCVEPLVSLLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVVPLVGLLYGKNYVLHEAISRALVKLGKDRPACKLEMVKAGVIDCVLDILHEAPDFLCAAFSELLRILTNNATIAKGQSAAKVVEPLFHLLTRLEFGADGQHSALQVLVNILEHPQCRADYTLTPHQVIEPLIPLLESPSPAVQQLAAELLSHLLYEEHLQKDPLTQLAIGPLIHVLGSGIHLLQQRAVKALVSIALTWPNEIAKEGGVSELSKVILQADPSLSNVLWESAASILVIILQFSSEFYLEVPVAVLVRLLRSASENTVVGALNALLVLESDDGTSAESMAESGAIEALLDLLRSHQCEDTAARLLEVLLNNVKIRDSKATKTAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEALARSTDAASACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLISSSDPETSVQAAMFVKLLFSNHTVQEYASSETVRAITAAIEKDLWATGTVNDEYLKALNSLFNNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACPAEVSRAQSVAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVTIKRGNNMKQSVGNPSVFCKITLGNNPPRQTKVISTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKMGKSSFGKVTIQIDRVVMLGAVAGEYSLLPESKSGPRNLEIEFQWSNK | null | null | anisotropic cell growth [GO:0051211]; anther dehiscence [GO:0009901]; cellulose biosynthetic process [GO:0030244]; cellulose microfibril organization [GO:0010215]; cortical microtubule organization [GO:0043622]; gynoecium development [GO:0048467]; plant-type primary cell wall biogenesis [GO:0009833]; pollen tube development [GO:0048868]; pollen wall assembly [GO:0010208]; protein localization to cortical microtubule cytoskeleton [GO:0072699]; regulation of cell shape [GO:0008360]; regulation of cellulose biosynthetic process [GO:2001006]; regulation of microtubule cytoskeleton organization [GO:0070507]; regulation of root morphogenesis [GO:2000067]; response to calcium ion [GO:0051592]; response to water deprivation [GO:0009414] | cellulose synthase complex [GO:0010330]; cortical microtubule [GO:0055028]; cytoplasm [GO:0005737]; cytoplasmic side of plasma membrane [GO:0009898]; cytosol [GO:0005829]; Golgi apparatus [GO:0005794]; microtubule minus-end [GO:0036449]; plasma membrane [GO:0005886]; plasmodesma [GO:0009506] | microtubule binding [GO:0008017] | PF00514;PF00168; | 2.60.40.150;1.25.10.10; | null | null | SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:20616083, ECO:0000269|PubMed:22190487, ECO:0000269|PubMed:22294619, ECO:0000269|PubMed:22751327, ECO:0000269|PubMed:24368796}; Peripheral membrane protein {ECO:0000305}; Cytoplasmic side {ECO:0000305}. Golgi apparatus {ECO:0000269|PubMed:22294619}. Endomembrane system {ECO:0000269|PubMed:22294619}. Cytoplasm, cytoskeleton {ECO:0000269|PubMed:22190487, ECO:0000269|PubMed:22294619, ECO:0000269|PubMed:22427339}. Note=Undergoes dynamic changes in response to dehydration (PubMed:22427339). Colocalizes with cellulase synthase (CESA) complexes (CSCs) in a dynamic way, both at the plasma membrane and in post-Golgi compartments (PubMed:20616083, PubMed:22190487, PubMed:22294619, PubMed:24368796). Present in distinct punctae at the cell cortex, called microtubule-associated cellulose synthase compartments, that move with constant velocities of 200 to 300 nm/min (PubMed:22294619). Present with cortical microtubule depolymerizing ends (PubMed:22190487, PubMed:22294619). {ECO:0000269|PubMed:20616083, ECO:0000269|PubMed:22190487, ECO:0000269|PubMed:22294619, ECO:0000269|PubMed:22427339, ECO:0000269|PubMed:24368796}. | null | null | null | null | null | FUNCTION: Regulator of the microtubular cytoskeleton (PubMed:22427339). Microtubule-associated protein essential for the functional association of cellulase synthase (CESA) complexes (CSCs) and cortical microtubules (PubMed:22190487, PubMed:22294619, PubMed:22751327, PubMed:23623553, PubMed:24368796). Promotes dynamics of CSCs in the plasma membrane (PubMed:20616083, PubMed:21150290, PubMed:22190487, PubMed:22294619, PubMed:22751327, PubMed:23623553, PubMed:24368796). Regulates primary cell wall biosynthesis and cellulose microfibrils organization (PubMed:20616083, PubMed:21150290, PubMed:23623553). Required for the regulation of root cell elongation/expansion (PubMed:20616083, PubMed:21150290, PubMed:22294619, PubMed:22427339, PubMed:7743935). Necessary for the formation of ovules, pollen cell wall morphogenesis and pollen tube development (PubMed:22294619). Involved in anther dehiscence, via dehydration-induced microtubule depolymerization and reorganization. May play a role in early gynoecial development (PubMed:22427339). {ECO:0000269|PubMed:20616083, ECO:0000269|PubMed:21150290, ECO:0000269|PubMed:22190487, ECO:0000269|PubMed:22294619, ECO:0000269|PubMed:22427339, ECO:0000269|PubMed:22751327, ECO:0000269|PubMed:23623553, ECO:0000269|PubMed:24368796, ECO:0000269|PubMed:7743935}.; FUNCTION: Target of the cellulase synthase (CESA) complexes (CSCs) trafficking inhibitor CESTRIN, which reduces cellulose content and alters anisotropic growth of hypocotyls; CESTRIN treatment inhibits the dynamics of CSCs. {ECO:0000269|PubMed:25535279}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IIS5 | KN5A_ARATH | MDSNNSKKGSSVKSPCQTPRSTEKSNRDFRVDSNSNSNPVSKNEKEKGVNIQVIVRCRPFNSEETRLQTPAVLTCNDRKKEVAVAQNIAGKQIDKTFLFDKVFGPTSQQKDLYHQAVSPIVFEVLDGYNCTIFAYGQTGTGKTYTMEGGARKKNGEIPSDAGVIPRAVKQIFDILEAQSAAEYSLKVSFLELYNEELTDLLAPEETKFADDKSKKPLALMEDGKGGVFVRGLEEEIVSTADEIYKVLEKGSAKRRTAETLLNKQSSRSHSIFSVTIHIKECTPEGEEIVKSGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHIPYRESKLTRLLRDSLGGKTKTCVIATVSPSVHCLEETLSTLDYAHRAKHIKNKPEVNQKMMKSAIMKDLYSEIERLKQEVYAAREKNGIYIPKERYTQEEAEKKAMADKIEQMEVEGEAKDKQIIDLQELYNSEQLVTAGLREKLDKTEKKLYETEQALLDLEEKHRQAVATIKEKEYLISNLLKSEKTLVDRAVELQAELANAASDVSNLFAKIGRKDKIEDSNRSLIQDFQSQLLRQLELLNNSVAGSVSQQEKQLQDMENVMVSFVSAKTKATETLRGSLAQLKEKYNTGIKSLDDIAGNLDKDSQSTLNDLNSEVTKHSCALEDMFKGFTSEAYTLLEGLQGSLHNQEEKLSAFTQQQRDLHSRSMDSAKSVSTVMLDFFKTLDTHANKLTKLAEDAQNVNEQKLSAFTKKFEESIANEEKQMLEKVAELLASSNARKKELVQIAVQDIRQGSSSQTGALQQEMSAMQDSASSIKVQWNSHIVQAESHHLDNISAVEVAKEDMQKMHLKCLENSKTGTQQWKTAQESLVDLEKRNVATADSIIRGAIENNEKLRTQFSSAVSTTLSDVDSSNREIISSIDNSLQLDKDASTDVNSTIVPCSENLKELRTHHDDNVVEIKQNTGKCLGHEYKVDEATSSTPRKREYNIPTVGSIEELKTPSFEELLKAFHDCKSPKQMQNGEAKHVSNGRPPLTAIN | null | null | cortical microtubule organization [GO:0043622]; cytokinesis by cell plate formation [GO:0000911]; microtubule-based movement [GO:0007018]; mitotic cytokinesis [GO:0000281]; mitotic spindle assembly [GO:0090307]; mitotic spindle organization [GO:0007052]; spindle elongation [GO:0051231]; unidimensional cell growth [GO:0009826] | cytoplasm [GO:0005737]; microtubule [GO:0005874]; mitotic spindle [GO:0072686]; spindle [GO:0005819]; spindle microtubule [GO:0005876] | ATP binding [GO:0005524]; microtubule binding [GO:0008017]; plus-end-directed microtubule motor activity [GO:0008574] | PF00225; | 3.40.850.10; | TRAFAC class myosin-kinesin ATPase superfamily, Kinesin family, KIN-5/BimC subfamily | null | SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton {ECO:0000269|PubMed:17652157}. Cytoplasm, cytoskeleton, spindle {ECO:0000269|PubMed:17652157}. Note=Microtubule-associated. {ECO:0000269|PubMed:17652157}. | null | null | null | null | null | FUNCTION: Responsible for microtubule translocation. May be important for the organization of phragmoplast-specific arrays of microtubules (By similarity). Plays an essential role in stabilizing the mitotic spindle (PubMed:17652157). Required during mitotic cytokinesis (PubMed:26745275). {ECO:0000250|UniProtKB:O23826, ECO:0000269|PubMed:17652157, ECO:0000269|PubMed:26745275}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IIU4 | AIR9_ARATH | MEEVAAKVEEETVETNVDAVKEDNATIANESRSPESVSAVSVVSNRAASTKKKPVISSNLIKPTASSSLRVSGTTPVTIRRNSTGGVTENLAGTSKVLPKQVSTTASRTDPVRRSLPELRKSSVSSLSAKTVSKPSLSESKKSVPVSPGSRSLTKSTGFSLSKPESSARPAMSVSVSSKRAPSSSVDSSGSRTSSGRLHSTLTSGRTVSKVSSPSAGSSPSVSSSIRSKSFSSPLDRTSNFSGRKKTSTPESRDSRLIILPKVEVKAGDDMRLDLRGHRIRSLTSGGLHLSPNLEFVYLRDNLLSTLEGIEILNRVKVLDLSFNDFKGPGFEPLENCKMLQQLYLAGNQITSLASLPQLPNLEFLSVAQNKLKSLAMASQPRLQVLAASKNKITTLKDFPYLPVLEHLRVEENPLLKISHLEAASILLVGPTLKKFNDRDLSREEVAIAKRYPPQTALCLREGWEFCKSDLAAESTFRFLVERWKDTLPSGYLIKEAHVDRPSEEAPCQCHFGLFQESPTATDQELALKFQWSVADRSLSNFVPILNATKEVYWPKREDIGKILKIECTPVMAETEYPSIFAISSPVQRGKGIPKVVSLELNGELVEGNIIKGQAVVAWCGGTPGKCITSWLRRKWNGSPVVIDGAEDEEYMLSLDDVGSSMVFMYTPVTEGGARGEPQYKYTEFVKAAPPSVSNVRITGDAVEGCVLKGVGDYFGGKEGPSKFEWLRKNKETGELSLISAGTSEYTLTQEDVGTHVTFVYIPANFEGLEGEPVSTSSSVVKPAPPKVTDAKIVGDLRENSKVTVTGTVTGGTEGSSRVQWFKSSCSILEGDNSLEELSTSKVAKSFRIPLGAVGYYIVAKYTPMTPDGECGEPVYVLSERAVETLPPSLNFLSITGDNIEGGILTASYGYIGGHEGKSKYEWHYHKAENDLPGALIPEASGLLQYTITKEAIGKFISFQCIPVRDDGIVGEPRSCMSQERVRPGNPSTVSLHVVGALVEGTMLSAEKEYWGGEEGASVFRWFRTNSDGTPCEIKGATTSSYLLSVGDIGYFISVSYEPVRNDRARGPTAISEIAGPIVAGHPNCQSLEFLGSMIEGQRLSFVASYTGGMKGNCYLEWVRVKNNGVKEILSSDEFLDLSLDDVGESIELIYTPVREDGIEGSPRSIRTDGIAPANPMGLELLIPDCCEKQEVVPHKTYFGGHEGVGEYIWYRTKVKLHGSALTEISYAGEEVVVCCRTLKYTPSLEDVGAYLVLYWIPTRVDGRSGKPVVVITNSPVAPADPEVSNVRVKKLFSDAYSGEGEYFGGHEGPSLFSWYRENDGTIDLIDGANSKTYEVTESDYNCRILFGYTPVRSDSVVGELKMSEPTEIILPEVPKVDMLAFTGKAVQGDVLTAVQVIPKTEIQQLVWSKYKGDIQYQWFRSPESGDKISYEALSSEISCSYKVRFEDIGRCLKCECVVHDVFGRSSELAYAETDPISPGFPRIEKLEIEGQGFHTNLYAVRGNYFGGKEGKSKIQWLRSMVGSPDLISIPGETGRMYEANVDDVGYRLVVVYTPIREDGVQGHPVSASTEPVAVEPDILKEVRQKLETGLVKFEVLCDKDPYPKKIVGEGNLERRMLEMNRKRIKVVKPGSKTSFATTEVRGSYGPPFHVETFRNDQRRLRIVVDSENEVDIVVQSRHLRDVIVLVIRGFAQRFNSTSLNSLLKIDT | null | null | cell cycle [GO:0007049]; cell division [GO:0051301]; lateral root morphogenesis [GO:0010102]; response to auxin [GO:0009733] | cortical microtubule [GO:0055028]; phragmoplast [GO:0009524]; plasma membrane [GO:0005886]; plasmodesma [GO:0009506]; preprophase band [GO:0009574] | null | PF12799; | 2.60.40.2700;3.80.10.10; | null | null | SUBCELLULAR LOCATION: Cytoplasm, cell cortex {ECO:0000269|PubMed:17027491}. Cytoplasm, cytoskeleton, phragmoplast {ECO:0000269|PubMed:17027491}. Note=During interphase, binds cortical microtubules. In M-phase, locates to the preprophase band. During cytokinesis, binds the phragmoplast but not the forming cell plate at the midline, and at a later stage the cortical division site. After cell-plate insertion, enters the new cross-wall. {ECO:0000269|PubMed:25908862}. | null | null | null | null | null | FUNCTION: Microtubule-associated protein that may be involved in the maturation of cell plates and proper insertion of cross-walls after cytokinesis. {ECO:0000269|PubMed:17027491}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IMH3 | NOC4_ARATH | MASILSKKQKKNEKYTLKELKSLGHDLLTSRSHINNLPLLLTFVSPESPPQFVVESLLSLQSFFTPLLSQLPPTSSSPSSTKTEDPEVVFKAWLRSKFDEFVKLLLDVLVSQQSEDSLRGIVLGTLMEFVKLLNAGRFHSSIYHRLLDAIIHSEVDIEIFLDILTSKYFKYIDVRYFTYISMEKFVKTLEASVSADRTVIENNEAESDSKESLELSVRKIYQVLSQIPPPEKQAEKSQHEMWSGSDESISEKPTDKKKKTEKGDSTLLSPATISKRMKLKFTKAWISFLRLPLPIDVYKEVLASIHLTVIPHLSNPTMLCDFLTKSYDIGGVVSVMALSSLFILMTQHGLEYPFFYEKLYALLVPSVFVAKHRAKFLQLLDACLKSSMLPAYLAASFTKKLSRLSLSIPPAGSLVITALIYNLLRRNPTINHLVQEIVENADEANTEAGEHNESQPKTIKKRKLGIDYFNNQESDPKKSGALKSSLWEIDTLRHHYCPPVSRFISSLETNLTIRSKTTEMKIEDFCSGSYATIFGDEIRRRVKQVPLAFYKTVPTSLFADSDFPGWTFTIPQEEGTC | null | null | embryo development ending in seed dormancy [GO:0009793]; rRNA processing [GO:0006364] | Noc4p-Nop14p complex [GO:0030692]; nuclear membrane [GO:0031965]; nucleolus [GO:0005730]; nucleoplasm [GO:0005654]; small-subunit processome [GO:0032040] | null | PF03914; | null | CBF/MAK21 family | null | SUBCELLULAR LOCATION: Nucleus membrane {ECO:0000250|UniProtKB:Q9BVI4}; Multi-pass membrane protein {ECO:0000255}. Nucleus, nucleolus {ECO:0000269|PubMed:23382868}. | null | null | null | null | null | FUNCTION: Essential protein required during embryogenesis (PubMed:15266054, PubMed:23382868). Involved in nucleolar processing of ribosomal RNA (rRNA) 40S and 90S ribosomal subunits and ribosome assembly; early in ribosome biogenesis, especially required during the maturation of 5.8S rRNA (PubMed:23382868). Has a role in the nuclear export of 40S pre-ribosomal subunit to the cytoplasm (By similarity). {ECO:0000250|UniProtKB:Q06512, ECO:0000269|PubMed:15266054, ECO:0000269|PubMed:23382868}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IN23 | BZP34_ARATH | MAQLPPKIPNMTQHWPDFSSQKLSPFSTPTATAVATATTTVQNPSWVDEFLDFSASRRGNHRRSISDSIAFLEAPTVSIEDHQFDRFDDEQFMSMFTDDDNLHSNPSHINNKNNNVGPTGSSSNTSTPSNSFNDDNKELPPSDHNMNNNINNNYNDEVQSQCKMEPEDGTASNNNSGDSSGNRILDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALSQDKLFKDAHQEALKREIERLRQVYNQQSLTNVENANHLSATGAGATPAVDIKSSVETEQLLNVS | null | null | pollen development [GO:0009555]; positive regulation of DNA-templated transcription [GO:0045893] | nucleus [GO:0005634] | DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700] | PF07716; | 1.20.5.170; | null | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00978, ECO:0000269|PubMed:17719007}. | null | null | null | null | null | FUNCTION: Transcriptional activator involved in the sporophytic control of cell wall patterning and gametophytic control of pollen development. May play a role in the control of metabolic pathways regulating cellular transport and lipid metabolism. {ECO:0000269|PubMed:17719007, ECO:0000269|PubMed:19449183}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IN69 | MD33B_ARATH | MAPSEFQPSLWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSWKLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAPGYHKTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRSKWPSSPHDMDLDGLENSVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNMESKTIPRGEFHAIVSSGSKLALTSDSALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSWHDAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTPLAVANIIEEEESQWIDQTSSSPSNQWKEKKGKCRQGLINSLQQLGDYESLLTPPRSVQSVANQAAAKAIMFISGITNSNGSYENTSMSESASGCCKVRFSLFTLKMFVVMGVYLLCNISCWSLVMKGSPLTPSLTNSLITTPASSLAEIEKMYEVATTGSEDEKIAVASILCGASLFRGWSIQEHVIIFIVTLLSPPAPADLSGSYSHLINSAPFLNVLLVGISPIDCVHIFSLHGVVPLLAGALMPICEAFGSGVPNITWTLPTGELISSHAVFSTAFTLLLRLWRFDHPPLDYVLGDVPPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARRRFSKVIDISVDPIFMDSFPRLKQWYRQHQECMASILSELKTGSPVHHIVDSLLSMMFKKANKGGSQSLTPSSGSSSLSTSGGDDSSDQLKLPAWDILEAAPFVLDAALTACAHGSLSPRELATGLKILADFLPATLGTMVSYFSSEVTRGLWKPVSMNGTDWPSPAANLASVEQQIEKILAATGVDVPRLPADGISAATLPLPLAALVSLTITYKLDKATERFLVLVGPALDSLAAACPWPCMPIVTSLWTQKVKRWSDFLIFSASRTVFHHNRDAVIQLLRSCFTCTLGLTPTSQLCSYGGVGALLGHGFGSRYSGGISTAAPGILYIKVHRSIRDVMFLTEEILSLLMFSVKSIATRELPAGQAEKLKKTKDGSRYGIGQVSLSLAMRRVKLAASLGASLVWISGGLNLVQALIKETLPSWFISVHGEEDELGGMVPMLRGYALAYFAILSSAFAWGVDSSYPASKRRPRVLWLHLEFMVSALEGKISLGCDWATWQAYVTGFVSLMVQCTPAWVLEVDVEVIKRLSKSLRQWNEQDLALALLCAGGLGTMGAATELIVETCHQH | null | null | phenylpropanoid metabolic process [GO:0009698]; regulation of phenylpropanoid metabolic process [GO:2000762] | mediator complex [GO:0016592]; membrane [GO:0016020] | null | null | null | Mediator complex subunit 33 family | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000305}. | null | null | null | null | null | FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator. {ECO:0000269|PubMed:18430946, ECO:0000269|PubMed:22167189}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IPE3 | IDD15_ARATH | MRTDQVMLSNKNTNTCCVVSSSSSDPFLSSSENGVTTTNTSTQKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCSARRVHREPPRPPQTAVTVPACSSRTASTVSTPSSETNYGGTVAVTTPQPLEGRPIHQRISSSILTNSSNNLNLELQLLPLSSNQNPNQENQQQKVKEPSHHHNHNHDTTNLNLSIAPSSSYQHYNNFDRIKEIMASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMKKISSTIMQVTCQTCKGQFQAVAVPAATADETSLVVSYMSSANTDGELENGF | null | null | circumnutation [GO:0010031]; detection of gravity [GO:0009590]; floral organ morphogenesis [GO:0048444]; gravitropism [GO:0009630]; leaf morphogenesis [GO:0009965]; negative gravitropism [GO:0009959]; positive regulation of auxin biosynthetic process [GO:0010601]; regulation of auxin polar transport [GO:2000012]; regulation of DNA-templated transcription [GO:0006355]; regulation of starch metabolic process [GO:2000904] | nucleus [GO:0005634] | DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]; metal ion binding [GO:0046872] | PF12874; | 3.30.160.60; | null | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:16813575}. | null | null | null | null | null | FUNCTION: Transcription factor involved in inflorescence stems gravitropism, probably by regulating starch accumulation in amyloplasts of graviperceptive cells. Required for stem circumnutation movements. Regulates lateral organ morphogenesis and gravitropic responses (PubMed:24039602). Acts cooperatively with IDD16 to control silique and branche orientation (PubMed:24039602). Involved in the establishment of auxin gradients through the regulation of auxin biosynthesis and transport (PubMed:24039602). {ECO:0000269|PubMed:16813575, ECO:0000269|PubMed:18259878, ECO:0000269|PubMed:24039602, ECO:0000269|PubMed:9210330}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IPK2 | TAF14_ARATH | MESDIEILSEADASMRKLRIFGIDDREDENGRRRIKDVEVYVPIVCGSIAFYLGKKATEYRTHKWTVYVRGATNEDLGVVIKRVIFHLHPSFNNPTRVVDAPPFALSECGWGEFKIDITVFFHTDVCEKKLELSHVLKLNPENAYGPIPKSIKIPVVAESYNEVVFPDPFESFVARVHNHPAIQISNIPDGLNLPPPGVADTYYLMEKGDTKEHPLSPWFLKFSEVEELFKLTAARQKVQADIAKLKRQLIMVDGQPEGLESSSGYEC | null | null | cell differentiation [GO:0030154]; flower development [GO:0009908]; regulation of DNA-templated transcription [GO:0006355]; regulation of flower development [GO:0009909]; regulation of photoperiodism, flowering [GO:2000028]; regulation of timing of transition from vegetative to reproductive phase [GO:0048510] | cytoplasm [GO:0005737]; NuA4 histone acetyltransferase complex [GO:0035267]; nucleus [GO:0005634] | null | PF03366; | 2.60.40.1970; | YAF9 family | null | SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}. Nucleus {ECO:0000305}. | null | null | null | null | null | FUNCTION: Negative regulator of flowering controlling the H4K5 acetylation levels in the FLC and FT chromatin. Positively regulates FLC expression. Component of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription. Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of a NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. {ECO:0000269|PubMed:23017898, ECO:0000269|Ref.7}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IPY2 | SYCM_ARATH | MASSVLNLFKSCRPFTPIRFSSLPKSQFRIQFPLRPGKETQLRRCFTTLSSLTDGGAPISGGKELWLHNTMSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGYEVSYVRNFTDVDDKIIARAKELEEDPISLSRRFCEEFNRDMEQLQCLDPSVQPRVSDHIPQIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACDSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENGSVPSDTLTSINTFRTEFVASMSDDLLTPVTLAAMSEPLKTINDLIHTRKGKKQARREESLKALETTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKNKEYERSDAIRKDLAKVGIALMDSPEGTTWRPAIPLALQEPVTTTP | 6.1.1.16 | COFACTOR: Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000250|UniProtKB:P21888}; Note=Binds 1 zinc ion per subunit. {ECO:0000250|UniProtKB:P21888}; | cristae formation [GO:0042407]; cysteinyl-tRNA aminoacylation [GO:0006423]; polar nucleus fusion [GO:0010197]; regulation of programmed cell death [GO:0043067] | chloroplast [GO:0009507]; chloroplast stroma [GO:0009570]; mitochondrion [GO:0005739] | ATP binding [GO:0005524]; cysteine-tRNA ligase activity [GO:0004817]; metal ion binding [GO:0046872] | PF09190;PF01406; | 1.20.120.1910;3.40.50.620; | Class-I aminoacyl-tRNA synthetase family | null | SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000269|PubMed:10824085}. Mitochondrion {ECO:0000269|PubMed:10824085, ECO:0000269|PubMed:21135240}. | CATALYTIC ACTIVITY: Reaction=ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys); Xref=Rhea:RHEA:17773, Rhea:RHEA-COMP:9661, Rhea:RHEA-COMP:9679, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:35235, ChEBI:CHEBI:78442, ChEBI:CHEBI:78517, ChEBI:CHEBI:456215; EC=6.1.1.16; Evidence={ECO:0000250|UniProtKB:Q9HA77}; PhysiologicalDirection=right-to-left; Xref=Rhea:RHEA:17775; Evidence={ECO:0000250|UniProtKB:Q9HA77}; | null | null | null | null | FUNCTION: Required for female gametophyte development. Is necessary for the fusion of central cell nuclei and programmed cell death (PCD) of the antipodals. {ECO:0000269|PubMed:21135240}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IQV7 | SCY2_ARATH | MNSSQACFFHFSLRPISLSHPSYAFLSKRDPFLCSQPRKCLTTNLNMSRTRQGHSIQMNRRHLLMKERKSFSINYSDKFRDDSMSSEEMHTDALDVEIIPPDSQDIRNSQNSAVSNTLQDDRPKSFRNRFLDFVRISSVLNTAAERFFKSEIRRRLFVTAVLLVLSRVGYFIPLPGFDRRLIPQDYLSFVSGSVEELGEFGAEIKLSLFQLGLSPQIIASIIMQVLCHVLPSLVKLRKEGLDGHEKIKSYIWWLSFFFAIVEALVVAYTSLQYSVFAATAQVKHVMMTSSLLVCGAMTMTWLCDTISESGFGHGSSLIICVGILTGYTETLHKMLNQISGSFSNWLPYLLGLLGIFTVVTMFAVVVTEGCRKIKLQYYGFKLASASREGSPITEVEPYIPFNINPAGMQPVLTTTYLLAFPSILASILGSPFLLNMKEILNPESTVGAPPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATASTVLDHYLRSINQGFSIGFTSVLIIVGSIIELRRSYHAYNVMPSLSKALKRYGV | null | null | chloroplast organization [GO:0009658]; protein localization to chloroplast [GO:0072598]; SRP-dependent cotranslational protein targeting to membrane, translocation [GO:0006616]; thylakoid membrane organization [GO:0010027] | amyloplast membrane [GO:0033097]; chloroplast membrane [GO:0031969]; chloroplast thylakoid membrane [GO:0009535]; plastid envelope [GO:0009526] | protein transmembrane transporter activity [GO:0008320]; signal sequence binding [GO:0005048] | PF00344; | 1.10.3370.10; | SecY/SEC61-alpha family | null | SUBCELLULAR LOCATION: Plastid, chloroplast membrane {ECO:0000269|PubMed:21051552}; Multi-pass membrane protein {ECO:0000269|PubMed:21051552}. Plastid, amyloplast membrane {ECO:0000269|PubMed:21051552}; Multi-pass membrane protein {ECO:0000269|PubMed:21051552}. Plastid, chloroplast thylakoid membrane {ECO:0000269|PubMed:21051552}; Multi-pass membrane protein {ECO:0000269|PubMed:21051552}. Note=Predominantly localized to envelope membranes. | null | null | null | null | null | FUNCTION: Involved in protein export. Probably interacts with other proteins to allow the postimport or conservative sorting pathway for inner membrane proteins in plastids. Central subunit of the protein translocation channel SecYE. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug (By similarity). {ECO:0000250, ECO:0000269|PubMed:21051552}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IRB4 | MYB88_ARATH | MEETTKQNNMKKKKKILLHSDDSKKKERHIVTWSPEEDDILRKQISLQGTENWAIIASKFNDKSTRQCRRRWYTYLNSDFKRGGWSPEEDTLLCEAQRLFGNRWTEIAKVVSGRTDNAVKNRFTTLCKKRAKHEAMAKENRIACCVNSDNKRLLFPDGISTPLKAESESPLTKKMRRSHIPNLTEIKSYGDRSHIKVESTMNQQRRHPFSVVAHNATSSDGTEEQKQIGNVKESDGEDKSNQEVFLKKDDSKVTALMQQAELLSSLAQKVNADNTDQSMENAWKVLQDFLNKSKENDLFRYGIPDIDFQLDEFKDLVEDLRSSNEDSQSSWRQPDLHDSPASSEYSSGSGSGSTIMTHPSGDKTQQLMSDTQTTSHQQNGGELLQDNGIVSDATVEQVGLLSTGHDVLKNSNETVPIPGEEEFNSPVQVTPLFRSLAAGIPSPQFSESERNFLLKTLGVESPSPYPSANPSQPPPCKRVLLDSL | null | null | embryo sac development [GO:0009553]; guard cell differentiation [GO:0010052]; guard mother cell cytokinesis [GO:0010235]; guard mother cell differentiation [GO:0010444]; lateral root development [GO:0048527]; megasporogenesis [GO:0009554]; multicellular organismal-level water homeostasis [GO:0050891]; positive regulation of lateral root development [GO:1901333]; positive regulation of response to salt stress [GO:1901002]; positive regulation of response to water deprivation [GO:1902584]; regulation of cell cycle G1/S phase transition [GO:1902806]; regulation of DNA endoreduplication [GO:0032875]; regulation of DNA-templated transcription [GO:0006355]; regulation of stomatal complex patterning [GO:2000037]; response to abscisic acid [GO:0009737]; response to gravity [GO:0009629]; stomatal complex formation [GO:0010376] | nucleus [GO:0005634] | DNA-binding transcription factor activity [GO:0003700]; DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; RNA polymerase II cis-regulatory region sequence-specific DNA binding [GO:0000978]; sequence-specific DNA binding [GO:0043565] | PF13921; | 1.10.10.60; | null | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00625, ECO:0000269|PubMed:20675570}. | null | null | null | null | null | FUNCTION: Transcription factor that binds to DNA in promoters cis-regulatory element 5'-GGCGCGC-3' of cell cycle genes, including cyclins, cyclin-dependent kinases (CDKs), and components of the pre-replication complex (PubMed:20675570, PubMed:24687979). Binds to DNA in promoters cis-regulatory element 5'-AGCCG-3' of auxin regulated genes (e.g. PIN3 and PIN7) (PubMed:26578169). Together with FAMA and MYB124, ensures that stomata contain just two guard cells (GCs) by enforcing a single symmetric precursor cell division before stomatal maturity (PubMed:24571519). Represses the expression of the mitosis-inducing factors CDKB1-1 and CDKA-1, specifically required for the last guard mother cells (GMC) symmetric divisions in the stomatal pathway (PubMed:20675570, PubMed:24687979). Represses CYCA2-3 in newly formed guard cells (PubMed:21772250). Together with MYB88, regulates stomata spacing by restricting divisions late in the stomatal cell lineage thus limiting the number of GMC divisions (PubMed:16155180). In collaboration with CDKB1-1 and CDKB1-2, restrict the G1/S transition and chloroplast and nuclear number during stomatal formation, and normally maintain fate and developmental progression throughout the stomatal cell lineage (PubMed:24123248). Involved in sensing and/or transducing abiotic stress (e.g. drought and salt), probably via the positive regulation of NAC019 (PubMed:21105921). Regulates female reproduction being required for entry into megasporogenesis, probably via the regulation of cell cycle genes (PubMed:22915737). Plays a minor role in lateral roots (LRs) initiation (PubMed:26578065). Involved complementarily in establishing the gravitropic set-point angles of lateral roots by regulating the transcription of PIN3 and PIN7 in gravity-sensing cells of primary and lateral roots (PubMed:26578169). {ECO:0000269|PubMed:16155180, ECO:0000269|PubMed:20675570, ECO:0000269|PubMed:21105921, ECO:0000269|PubMed:21772250, ECO:0000269|PubMed:22915737, ECO:0000269|PubMed:24123248, ECO:0000269|PubMed:24571519, ECO:0000269|PubMed:24687979, ECO:0000269|PubMed:26578065, ECO:0000269|PubMed:26578169}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IRR2 | SAD2_ARATH | MDLHSLALILRTAALSPIPDERKVSEQQLNQLEHTPQHLVRLLQIAVDGNCDMAVRQIASIQFKNLIAKNWSPEDCGPAVRQQQIFESDKELVRDNILVYVTQVPTLLRSQLGESLKTIIYADYPEQWPRLLDWVKYNLQNQQIYGALFVLRILSRKYEFKSDEERTPVSRIVEETFPQLLTIFNGLIQIPNPSLEIAELMKLICKIFWSSIYLELPRQLFDLNVFNAWMVLFLSVSERPVPVEGQPMDPELRKSWGWWKVKKWTVHILNRLYSRFGDPKLQSPENKPFAQMFQKNYAGRILEGHLNFLNTIRVGGYLPDRVINLLLQYLSNSISKNSMYKLLLPRLDVLLFEIVFPLMCFNDNDQKLWEEDPHEYVRKGYNIIEDLYSPRTASMDFVNELVRKRGKENLPKFVKFVVEIFLSYEKATVEEKPYRQKDGAMLAVGALCDKLKQTDPYKSQLELMLVQHIFPDFNSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPDLPVRVDSVFALRSFVEACKDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPFAFGLCQNLAAAFWRCLNTSEANDDSDDMGALAAVGCLRAISTILESVSSLPQLFVEIEPTILPIMQKMLTTDGQEVFEEVLEIASYMTFYSPSISLDIWSLWPLMVEALVDWGIDFFPNILVPMDNFISRGTAHFLTCKEPDYQQSLYNVLSTLMTDRNIEDSEIESAPKLIEVVFQNCKGQVDQWVEPYLRLTVDRLQRAETSYVKSLLIQVVANMLYYNPGLTLGVLHNTGLASKVFDLWFQMLQQKRKSGLPANFKREHDKKVCCLGLTSLLALPGGQFPDEALQRVFRATLDLLVAYKNQLAEAAKETEVDYEEEMNGLQSSDDDYDDDGSDGEMDDTEEGDEAQSVKLQKLAAQAKAFHYDDDDDDDSDDDFSDEDEFQSPIDEVDAFVFFVDAIRVMQASDAQRFQNLNQSLDFTYQAIANGIAQHAELRRVEIEKEKQKKLAAASTPVTAL | null | null | protein import into nucleus [GO:0006606]; RISC complex assembly [GO:0070922] | cytoplasm [GO:0005737]; cytosol [GO:0005829]; nuclear envelope [GO:0005635]; nucleus [GO:0005634] | small GTPase binding [GO:0031267] | PF08506;PF03810; | 1.25.10.10; | Importin beta family | null | SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:16889648}. Nucleus {ECO:0000269|PubMed:16889648}. | null | null | null | null | null | FUNCTION: Functions probably in nuclear protein import, either by acting as autonomous nuclear transport receptor or as an adapter-like protein in association with other importin subunits (Probable). Involved in the regulation of the abscisic acid (ABA)-mediated pathway in response to cold or salt stress (PubMed:16889648). Involved in UV-B responses by regulating accumulation of UV-absorbing pigments through mediation of MYB4 nuclear transport (PubMed:17993626). Involved in trichome initiation by controlling GL1, GL2, GL3 and TTG1 transcription and may affect an upstream regulator of GL3 and disrupt complex function (PubMed:18713401, PubMed:19234066). Acts as a negative regulator miRNA activity by regulating miRNA loading into AGO1 complexes (PubMed:21984696). {ECO:0000269|PubMed:16889648, ECO:0000269|PubMed:17993626, ECO:0000269|PubMed:18713401, ECO:0000269|PubMed:19234066, ECO:0000269|PubMed:21984696, ECO:0000305}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IS56 | ILK1_ARATH | MENITAQLKRGISRQFSTGSIRRTLSRQFTRQSSLDPRRTNMRFSFGRQSSLDPIRRSPDSSKSDDEPHMSVPENLDSTMQLLFMASKGDVRGIEELLDEGIDVNSIDLDGRTALHIAACEGHLGVVKALLSRRANIDARDRWGSTAAADAKYYGNLDVYNLLKARGAKVPKTRKTPMTVSNPREVPEYELNPLEVQVRKSDGISKGAYQVAKWNGTRVSVKILDKDSYSDPERINAFRHELTLLEKVRHPNVIQFVGAVTQNIPMMIVVEYNPKGDLSVYLQKKGRLSPSKALRFALDIARGMNYLHECKPDPIIHCDLKPKNILLDRGGQLKISGFGMIRLSKISQDKAKVANHKAHIDLSNYYIAPEVYKDEIFDLRVDAHSFGVILYEITEGVPVFHPRPPEEVARMMCLEGKRPVFKTKSRSYPPDIKELIEKCWHPEAGIRPTFSEIIIRLDKIVANCSKQGWWKDTFKFPWK | 2.7.11.1 | null | innate immune response [GO:0045087]; protein autophosphorylation [GO:0046777]; response to osmotic stress [GO:0006970] | cytoplasmic side of plasma membrane [GO:0009898]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789] | ATP binding [GO:0005524]; protein kinase activity [GO:0004672]; protein serine kinase activity [GO:0106310]; protein serine/threonine kinase activity [GO:0004674]; protein serine/threonine/tyrosine kinase activity [GO:0004712] | PF12796;PF07714; | 1.25.40.20;1.10.510.10; | Protein kinase superfamily, Ser/Thr protein kinase family | PTM: Autophosphorylated at Ser-17 and Ser-26. {ECO:0000269|PubMed:27208244}. | SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:27208244}; Peripheral membrane protein {ECO:0000269|PubMed:27208244}. Endoplasmic reticulum membrane {ECO:0000269|PubMed:27208244}; Peripheral membrane protein {ECO:0000269|PubMed:27208244}. | CATALYTIC ACTIVITY: Reaction=ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-[protein]; Xref=Rhea:RHEA:17989, Rhea:RHEA-COMP:9863, Rhea:RHEA-COMP:11604, ChEBI:CHEBI:15378, ChEBI:CHEBI:29999, ChEBI:CHEBI:30616, ChEBI:CHEBI:83421, ChEBI:CHEBI:456216; EC=2.7.11.1; Evidence={ECO:0000269|PubMed:27208244}; CATALYTIC ACTIVITY: Reaction=ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-threonyl-[protein]; Xref=Rhea:RHEA:46608, Rhea:RHEA-COMP:11060, Rhea:RHEA-COMP:11605, ChEBI:CHEBI:15378, ChEBI:CHEBI:30013, ChEBI:CHEBI:30616, ChEBI:CHEBI:61977, ChEBI:CHEBI:456216; EC=2.7.11.1; Evidence={ECO:0000269|PubMed:27208244}; | null | null | null | null | FUNCTION: Functions as a link between plant defense pathways, stress responses and potassium homeostasis. Promotes osmotic stress sensitivity, responses to the bacterial-derived pathogen-associated molecular pattern (PAMP) flg22, and resistance to bacterial pathogens. Promotes the accumulation of POT5/HAK5, a potassium transporter that mediates high-affinity uptake during potassium deficiency. {ECO:0000269|PubMed:27208244}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IS91 | RSA1_ARATH | MHRDMYSSRGTGYGQQQYGSQSGYSQNLGSGYPGSSVSGGAEGGSQISLSSRHPSITGAPQETDIGGGYRSHLSTAASHYGTQYGSVYGSTSLSSSQPLSTNGLGSSVLDNRSGYVPTLPDSPKFASGSYLSPSSHGYGQKTDDLYSDKLSGYIPVDRRQYGEQSSSYLGRELQNEPTRRYADPSNFARQTDLYDRIDQASLLRGEQLLKMQSLHTSSVDAGVNRQTDYLTERSSTVRHSDQEAMHYGGRLESDPHGLSVRNTSSYASQHTPSLLGAVPRRNLDDYIYPESSSNPGYGVSLPPGRDYGTGKGIHSAASLDLDYPGGMLARGTGAAPRVDDLRKGDRASYLREFDLREEERRREDQRARDKEREREREREHDRERERQRERERQRARDRERERILERREKERQGERERERKRALEIKRDRTPTARATSKDTKERTPVPKSISRDARSSSLRRDAHHREASIRRSSPIKPIRRDYVCKVLSSRLVDMERDYVTLDKRYPRLFVPSEFSKVVVNWPKQKLTLSMHTAVSFEHDYIEDGGADVKSTSTKPLALKTGGKSVWNAKMVLMSGLSRTALEDLASDKFFEDRIPHICNILKFAVLKKDHSFMAIGGSWDPTDGMDPSVDQSSLIQTMLRHSKDKLHLDLSNCRHWNPFLEIHYDRVGTDGVFSYKEITVLFVPDLSECLPSFDVWRTQWLAHRKALTERDRLLSQEVKKDTVEVTKDAEKKSPGDTSGTPTTGTKKTVKKIIKRVVKRPVNDGKATGMKGEKSDVPEHVAIPETTVPKEESTGTSSNKKIVKKVAETGDTSDPSAKANEQTPAKTIVKKKIIKRVAKRKVAEIDNKMDGDSKKDGDSDEKKVMEVGKKSSDSGSVEMKPTAESLEDVKDENASKTVDVKQETGSPDTKKKEGASSSSKKDTKTGEDKKAEKKNNSETMSEGKKIDRNNTDEKEVKEKVTEKEIKERGGKDESRIQVKDRKKCEEPPRAGFILQTKRNKDSKLRSLSASLDSLLDYTDKDLDESSFEISLFAESLYEMLQYQMGSRIFEFLKKLRVKIVRQRNQRKRHQEELSVKQNEAKSQDKRQKTAEHEDKEASVISESAPGKDDKETSGKETVDGSREIADKEAVAKTKETLGSKEVTVGEAVNMEVENQDEEDDDGDDDPEEDPEEDPEEDPEEDPEEDPEECEEMDVANTEQEEPAEEPQKKEENLEKTSGTVADPITEAETDNRKEERGPNDSKTEIKPKSETEKHGKQDGGTSDAAKREETVDKELLQAFRFFDRNQAGYVRVEDMRVTIHSLGKFLSHREVKELVQSALLESNTGRDDRILYNKLVRLSL | null | null | regulation of DNA-templated transcription [GO:0006355]; response to salt stress [GO:0009651]; sodium ion homeostasis [GO:0055078] | nucleus [GO:0005634] | calcium ion binding [GO:0005509] | PF19257;PF14443;PF19256; | 1.10.238.10; | null | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:24009530}. | null | null | null | null | null | FUNCTION: Required for salt tolerance and sodium (Na) homeostasis after salt stress. Together with BHLH148/RITF1, regulates the transcription of several genes involved in the detoxification of reactive oxygen species (ROS) generated by salt (NaCl) stress. Binds calcium. {ECO:0000269|PubMed:24009530}. | Arabidopsis thaliana (Mouse-ear cress) |
F4ISL7 | TI236_ARATH | MSLRLQNPFLSTPLLHGSFNRREKRINVARRAFRSKRIYSEKKQNDWLAKVAKFSQFCGKNVQLLRKSLDSRSRMEVKCLKEPFVRSKDLVRSLAPVWEEGLFFLRCSVFFAVISGVCLLVWYGQNKARVFVETKLLPSVCSVLSETIQREVDFGKVRRVSPLCITLEASSIGPHGEEFSCGEVPTMKVCVRPFASLRRGKIVVDAILSNPTVLVAQKKDFTWLGIPLSDTTLPSHLSSEEGIDFRTKTRRVSREEAGIRWDEERDNDARKAAEIGYIVPCKNYSQAKDNAVKHDRRFTEIANPNSFICMDEKMHSAEQHCMDPGVEYDVKHAELEKSFGIKIPGSGLKFLSKMLKVPRKYKFKWNSKSHKNSMSNISAKKRILERSASAALSYFHSLSQQKLDEPSVLSTNYDGLSLDMLLVKGDREISNQYDRHVPYGEQSLANDLDGKGYRVRGKRLLGVKKASTLDKFTVSCDPFLMTVDRLCALLQTKRSPSVEDIVNSSESETLSSQRGDISMNVVNQNTDDVPHGNRSGNQPRDFTFKKHEHQPVANHWRPSWPRNKKLKEAVFNILTGSSKKLTGRADPNAPHLSDELEKLPAVYVEKTLPVMLDSVQFKGGTLLLLAYGDTEPREMRNVHGHVKFQNHYGRVYVQLGGNCNMWRSDVTSEDGGLLSVDVFVDTVEQNWHANLNVANFFVPIFERILEIPIEWSKGRATGEVHLCMSRGESFPNLHGQLDVTGLGFHINDAPSSFSDVSASLSFRGQRIFLHNANGWFGKVPLEASGDFGIHPDEGEFHLMCQVPYVEINALMKTFKMKPLFFPLAGSVTAVFNCQGPLDAPVFVGSCMVSRKIAYLSPDLPTSLAYEAMLKNKEAGAVAAFDRVPFSYLSANFTFNTDNCVADLYGIRATLVDGGEIRGAGNAWICPEGEVDDTALDVNFSGNISFDKVLHRYMPEYFNIGMLKLGDLTGETKLSGALLKPRFDIKWAAPKADGSLTDARGDIVISHDNIIVNSSSVAFDLFTKLDTSYHDPCLSHQDFTQGEAMPFVVEGLDLDLRMRGFEFFSLVSSYPFDSPRPTHLKATGRIKFLGKIKRHSTTKDGDVGSDKCEDAAAISSLDGDISISSLKLNQLILAPQLSGRLSVSRDHVKLDAAGRPDESLTLDFIGPLQPNSDENVQSGKLLSFSLQKGQLRANACFQPQQSATLEIRNFPLDELELASLRGLIQKAEIQLNLQKRRGHGLLSVIRPKFSGVLGEALDVAVRWSGDVCFMLSGRLEVMITVEKTILEQSNSRYELQGEYVLPGSRDRDLGQKEAGSFLMRAMTGHLGSVISSMGRWRMRLEVPKAEVAEMLPLARLLSRSTDPAVHSRSKDLFIQSVQNLCLQAENLRDLLEEIRGYYTPPSEVVLEDLSLPGLAELKGHWHGSLDASGGGNGDTLAEFDFHGDDWEWGTYKTQRVLATGSYNNDDGLRLKEMLIQKGNATLHADGTLLGPKTNLHFAVLNFPVSLIPTLVEVVESSATDIVHSLRKLLSPIKGILHMEGDLRGSLEKPECDVQVRLLDGAVGGIDLGRAEVFASLTSNSRFLFNSNFEPFVQNGHVHIQGSVPVSFSQKNMSEGEVSETDRGGAVKIPSWAKEKEDDEKRTSRDRSEERWDSQLAESLKGLYWNILDAGEVRLEADIKDGGMTLLTAISPYANWLQGNADIRLQVGGTVDHPVLDGSASFHRASISSPVLRKPLTNFGGTLHVKSNRLCITSLESRVSRKGKLVVKGNLPLRSNEASAGDGIELKCEVLEVRAKNFLSCQVDTQLQITGSMLQPTISGNIKLSQGEAYLPHDKGGGAAPLNRLAANQYSIPGAAINQAVSSRYFARFFGTERASSGMKFSQSTGKSNSVEKEIEEVKMKPNMDIRLSDMKLVLGPELRIMYPLILNFAVSGELELDGMAHPKFIKPKGVLTFENGDVNLVATQVRLKREHLNVAKFEPEHGLDPLLDLALVGSEWQFRVQSRASNWQDKLVVTSTRSVEQDALSPSEAAKVFESQLAESILEGDGQLAFKKLATATLGTIMPRIEGKGEFGQARWRLVYAPQIPSLLSVDPTVDPLKSLASNISFGTEVEVQLGKRLQASVVRQMKDSEMAMQWTLIYQLTSRLRVLLQSAPSKRLLFEYSATSQD | null | null | amyloplast organization [GO:0009660]; protein secretion [GO:0009306] | amyloplast [GO:0009501]; chloroplast inner membrane [GO:0009706]; chloroplast intermembrane space [GO:0031972]; plasma membrane [GO:0005886] | null | PF04357; | null | TamB family | null | SUBCELLULAR LOCATION: Plastid, chloroplast inner membrane {ECO:0000269|PubMed:30464337}; Single-pass membrane protein {ECO:0000255}. Plastid, chloroplast intermembrane space {ECO:0000269|PubMed:30464337}. | null | null | null | null | null | FUNCTION: Part of the inner chloroplast membrane translocon complex (TIC) which associates with the outer chloroplast membrane translocon complex (TOC) and forms a supercomplex involved in protein precursor import into the chloroplast stroma (PubMed:30464337). Required for the import of HSP93, TIC40 and RBCS protein precursors in the chloroplast stroma (PubMed:30464337). Links the outer and inner membrane translocons of the chloroplast envelope (PubMed:30464337). {ECO:0000269|PubMed:30464337}. | Arabidopsis thaliana (Mouse-ear cress) |
F4ISV9 | APD4_ARATH | MGSIRGDLQPLFVMPPPPLDEDCDDIFNSDESSWGLLSLSCFGIIMGLWFFASVCLIFGVYGSETVWLGPNSSILVKPSSIFVKSINAKELDFSKPGLQLYGFNGQSTPSGYFVNWTESRVLSVSQNSYKGWPYYLNRGTHMNISYNILPKGSAVRLVITEGMPFFYRSSLKDIAFRDTAWSWNLIQGSGMIQLDISKSKGYYLTVANLKRKDVEVELDIDVKVVLYDTKQSSYNCSFSNGECSFKMNERSPVENYAVVTSPALGQGVSIDDEWYIELSYQPRLIAYGSFTGVLLSFMLVAIHFCNKLKCCGGEGFLSEDDSVRTCLLADKGDNDCCNDVEASNKSLCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKIMHVKRIYTA | 2.3.2.27 | null | mitotic cell cycle [GO:0000278]; pollen development [GO:0009555]; protein ubiquitination [GO:0016567] | endosome [GO:0005768]; plant-type vacuole membrane [GO:0009705] | metal ion binding [GO:0046872]; ubiquitin protein ligase activity [GO:0061630] | PF16041;PF16040;PF13920; | 3.30.40.10; | null | null | SUBCELLULAR LOCATION: Endomembrane system {ECO:0000250|UniProtKB:Q0WS06}; Multi-pass membrane protein {ECO:0000255}. Vacuole membrane {ECO:0000250|UniProtKB:Q0WS06}; Multi-pass membrane protein {ECO:0000255}. | CATALYTIC ACTIVITY: Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.; EC=2.3.2.27; Evidence={ECO:0000250|UniProtKB:Q6DBH0}; | null | PATHWAY: Protein modification; protein ubiquitination. {ECO:0000250|UniProtKB:Q6DBH0}. | null | null | FUNCTION: Involved in pollen mitosis II (PMII) regulation during male gametogenesis. {ECO:0000269|PubMed:22897245}. | Arabidopsis thaliana (Mouse-ear cress) |
F4ITL6 | RTE1_ARATH | MSRGRGVPMMDLKRSYDVEDRVVSVSIPSIIEADEADLWPLPEIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPARYLQLDRTKCCLPPNMGGHTCKYGFKHTDFGTARTWDNALSSSTRSFEHKTYNIFTCNCHSFVANCLNRLCYGGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLVGWPFLIGLSSFSLLLFAWFIIATYCFKNIIT | null | null | negative regulation of ethylene-activated signaling pathway [GO:0010105]; response to ethylene [GO:0009723] | endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]; Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139] | null | PF05608; | null | null | null | SUBCELLULAR LOCATION: Endoplasmic reticulum membrane {ECO:0000269|PubMed:17644624, ECO:0000269|PubMed:17999643}; Multi-pass membrane protein {ECO:0000255}. Golgi apparatus membrane {ECO:0000269|PubMed:17644624, ECO:0000269|PubMed:17999643}; Multi-pass membrane protein {ECO:0000255}. | null | null | null | null | null | FUNCTION: Acts at an early step in the ethylene signaling pathway. Positively regulates ETR1, leading to the negative regulation of ethylene responses. {ECO:0000269|PubMed:16682642, ECO:0000269|PubMed:18643990, ECO:0000269|PubMed:19369589}. | Arabidopsis thaliana (Mouse-ear cress) |
F4ITM1 | RGSL1_ARATH | MEEDDLNPAGKPLYRLYFKGLVTEEKEMLLAGFGVAICGDKDDLLFDLKVSIHDPTITLLEVELIALKSGLNQAVSLGINHISICCDHEYIFELVMGISTPKQESIALLLRDVQGIRKYLTSSIPVMLTQNQSNLAYDFAIEAISSEIIIDIPAQKETCNICLNDDINADQMFSVDKSGHMCCSECVKRHIEVRLLEGSLITCPHYRCNSLLTSVRCGNLLTPKLNKMWEQKTKDELIPVMDRVYCPNPRCSTLMSETELSGLNIGVRRCCVKCGEPFCVKCKVSWHNNLSCDEYKTLHPNPTENDGRLRDLANEKSWRQCSKCKHMIELSSGCISVVCRCGHTFCYQCGADAGDCFHGLGRDDLDLTQCCGSCCCFVFFLVIIAIVVTIILLVRRFS | 2.3.2.31 | COFACTOR: Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000305}; Note=Binds 4 Zn(2+) ions per subunit. {ECO:0000305}; | abscisic acid-activated signaling pathway [GO:0009738]; acquisition of seed longevity [GO:0140547]; gibberellic acid mediated signaling pathway [GO:0009740]; gibberellin mediated signaling pathway [GO:0010476]; negative regulation of abscisic acid-activated signaling pathway [GO:0009788]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; protein polyubiquitination [GO:0000209]; seed maturation [GO:0010431]; ubiquitin-dependent protein catabolic process [GO:0006511] | plant-type vacuole membrane [GO:0009705]; plasma membrane [GO:0005886]; ubiquitin ligase complex [GO:0000151] | nucleic acid binding [GO:0003676]; RNA-DNA hybrid ribonuclease activity [GO:0004523]; ubiquitin conjugating enzyme binding [GO:0031624]; ubiquitin protein ligase activity [GO:0061630]; zinc ion binding [GO:0008270] | PF01485;PF13456; | 1.20.120.1750;3.30.420.10;3.30.40.10; | RBR family | null | SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:25330042}; Single-pass membrane protein {ECO:0000255}. Vacuole membrane {ECO:0000269|PubMed:27495812}; Single-pass membrane protein {ECO:0000255}. Note=Localized transiently in the vacuole when in complex with PYL4 and PYR1. {ECO:0000269|PubMed:27495812}. | CATALYTIC ACTIVITY: Reaction=[E2 ubiquitin-conjugating enzyme]-S-ubiquitinyl-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-N(6)-ubiquitinyl-L-lysine.; EC=2.3.2.31; Evidence={ECO:0000269|PubMed:24388521}; | null | PATHWAY: Protein modification; protein ubiquitination. {ECO:0000305}. | null | null | FUNCTION: Acts as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates (PubMed:24388521). Negative regulator of the abscisic acid (ABA) signaling pathway which targets PYL4 and PYR1 ABA receptors in plasma membrane to promote their FREE1/FYVE1-dependent trafficking and degradation upon ubiquitynation; this process involves clathrin-mediated endocytosis and trafficking through the ESCRT pathway (PubMed:25330042, PubMed:27495812). Involved in the maintenance of seed longevity (PubMed:24388521). May enhance gibberellins responses (PubMed:24388521). {ECO:0000269|PubMed:24388521, ECO:0000269|PubMed:25330042, ECO:0000269|PubMed:27495812}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IUX6 | RENT2_ARATH | MDHPEDESHSEKQDDEEALARLEEIKKSIEAKLTLRQNNLNPERPDSAYLRTLDSSIKRNTAVIKKLKQINEEQREGLMDDLRGVNLSKFVSEAVTAICEAKLKSSDIQAAVQICSLLHQRYKEFSASLTQGLLKVFFPGKSAEDLEADKNSKAMKKRSTLKLLLELYYVGVIEDSNIFINIIKDLTSVEQLKDRDTTQTNLTLLTSFARQGRIFLGLPISGQDEDFFKGLDVTADQKKSFKKAFNTYYDALADLLQSEHKLLLQMEKENAKLVNAKGELSEDSASSYEKLRKSYDHLYRNISSLAEALDMQPPVMPEDGTTRLTAGDEASPSGTVKDTSVPEPIWDDEDTKTFYECLPDLRAFVPAVLLGEAEPKSNEQSAKAKEKLSESSSEVVENQQTTEDTTEVSADSASMDDRSNAEQPKEKEEVEKEKAKDTKKEKGKEKDSEKKMEHEKEKGKSLDVANFERLLQRLPGCVSRDLIDQLTVEYCYLNSKTNRKKLVKALFNVPRTSLELLAYYSRMVATLASCMKDIPSMLVQMLEDEFNSLVHKKDQMNIETKIRNIRFIGELCKFKIVPAGLVFSCLKACLDEFTHHNIDVACNLLETCGRFLYRSPETTLRMTNMLDILMRLKNVKNLDPRQSTLVENAYYLCKPPERSARISKVRPPLHQYVRKLLFSDLDKDSIANVLKQLRKLPWSECEQYILKCFMKVHKGKYGQIHLIASLTSGLSRHHDEFVVAVVDEVLEEIRVGLELNEYGAQQKRLAHMRFLGELYNYEHVDSSVIFETLYLTLLYGHDTSEQEVLDPPEDFFRVRMVIILLETCGHYFDRGSSKKRLDQFLIHFQRYILSKGHLPLDIEFDLQDLFANLRPNMTRYSTIDEVNAAILQLEEREHASSGDKVSIERHSDTKPSNKSSSDVISSNGKSTAKDIRENGEAHGEESDSDSGSGSVVRDGQNEELDDGNHERGSESGDGDDYDDGDGPGSDDDKFRVRQKVVTVDLEEQADFDQELKALLQESMEQRKLELRGRPALNMTIPMSVFEGSGKDHHHFGRVVGENGEEVLDEENGEQREVQVKVLVKRGNKQQTRQMLIPSDCALVQSTKQKEAAELEEKQDIKRLVLEYNERDEEEANGLGTQILNWTSGGSRGSTRTGEGSGKSGGSRHRFYYHQGGGGSYHARRK | null | null | defense response to bacterium [GO:0042742]; jasmonic acid mediated signaling pathway [GO:0009867]; long-day photoperiodism [GO:0048571]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; response to wounding [GO:0009611]; salicylic acid mediated signaling pathway [GO:0009863] | cytoplasm [GO:0005737]; exon-exon junction complex [GO:0035145]; nucleolus [GO:0005730]; perinuclear region of cytoplasm [GO:0048471] | mRNA binding [GO:0003729] | PF02854;PF04050; | 1.25.40.180; | RENT2 family | null | SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000269|PubMed:19602621}. Cytoplasm {ECO:0000269|PubMed:19602621}. Cytoplasm, perinuclear region {ECO:0000250}. | null | null | null | null | null | FUNCTION: Recruited by UPF3 associated with the EJC core at the cytoplasmic side of the nuclear envelope and the subsequent formation of an UPF1-UPF2-UPF3 surveillance complex (including UPF1 bound to release factors at the stalled ribosome) is believed to activate NMD. In cooperation with UPF3 stimulates both ATPase and RNA helicase activities of UPF1. Binds spliced mRNA (By similarity). Involved in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons by associating with the nuclear exon junction complex (EJC). Required for plant development and adaptation to environmental stresses, including plant defense and response to wounding. {ECO:0000250, ECO:0000269|PubMed:22353561}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IV16 | TPK2_ARATH | MLSAMDVMIHSSSFLLPCDETCGTRYALVVLNQNLPRFTPLLWEHAKLRLCADGGANRIYDELPLFFPHEDPFVIRNRYKPDVIKGDMDSIRRDVLDFYVYWGTKVIDESHDQDTTDLDKCISYIRHSTLNQESSRLQILATGALGGRFDHEAGNLNVLYRYPDTRIVLLSDDCLIQLLPKTHRHEIHIHSSLQGPHCGLIPIGTPSANTTTSGLKWDLSNTEMRFGGLISTSNLVKEEIITVESDSDLLWTISIKKTGLPVQDHKP | 2.7.6.2 | null | phosphorylation [GO:0016310]; thiamine diphosphate biosynthetic process [GO:0009229]; thiamine metabolic process [GO:0006772] | cytosol [GO:0005829] | 8-oxo-dGDP phosphatase activity [GO:0044715]; ATP binding [GO:0005524]; kinase activity [GO:0016301]; thiamine binding [GO:0030975]; thiamine diphosphokinase activity [GO:0004788] | PF04265;PF04263; | 3.40.50.10240;2.60.120.320; | Thiamine pyrophosphokinase family | null | SUBCELLULAR LOCATION: Cytoplasm, cytosol {ECO:0000269|PubMed:17611796}. | CATALYTIC ACTIVITY: Reaction=ATP + thiamine = AMP + H(+) + thiamine diphosphate; Xref=Rhea:RHEA:11576, ChEBI:CHEBI:15378, ChEBI:CHEBI:18385, ChEBI:CHEBI:30616, ChEBI:CHEBI:58937, ChEBI:CHEBI:456215; EC=2.7.6.2; Evidence={ECO:0000269|PubMed:17611796}; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:11577; Evidence={ECO:0000269|PubMed:17611796}; | BIOPHYSICOCHEMICAL PROPERTIES: Kinetic parameters: KM=0.96 uM for thiamine {ECO:0000269|PubMed:17611796}; Vmax=8.4 pmol/min/mg enzyme with thiamine as substrate {ECO:0000269|PubMed:17611796}; | PATHWAY: Cofactor biosynthesis; thiamine diphosphate biosynthesis; thiamine diphosphate from thiamine: step 1/1. {ECO:0000269|PubMed:17611796}. | BIOPHYSICOCHEMICAL PROPERTIES: pH dependence: Optimum pH is 7. Active between pH 6 and pH 8. {ECO:0000269|PubMed:17611796}; | BIOPHYSICOCHEMICAL PROPERTIES: Temperature dependence: Optimum temperature is 45 degrees Celsius. {ECO:0000269|PubMed:17611796}; | FUNCTION: Catalyzes the phosphorylation of thiamine to thiamine pyrophosphate (TPP) (PubMed:17611796). TPP is an active cofactor for enzymes involved in glycolysis and energy production (PubMed:17611796). Plant leaves require high levels of TPP for photosynthesis and carbohydrate metabolism (PubMed:17611796). {ECO:0000269|PubMed:17611796}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IV66 | RNE_ARATH | MDVTEVPWRRLPQFSVSSRASWLVSSGFPLSSYMFSHVERGKTFRLTLCFGVSRLRPRSAIPLRFLLSVFSEQPPSRLKGLCEVVWIVEADLAANEHLYVTGDPSTLGSWEPDCAISMYPTENDNEWEAKVKIASGVNFRYNYLLKAGYGSSSDVIWRPGPQFSLSVPSSVNQDRKIIIRDSWMSMSISSKSQESYGWGSWIDDAYLFPNCVTPAQSEDECTSADSAIEVPRTHLNDKQVGAESFLCDELAAFSSENSNLSALFSDNYQPIEEPWLIQESITLQHERNMQTDSEQDVESCDDNENNLNTDEQNHQLTETLLPDGGFFQSESIATTILINSSICTVQRIAVLEGGKLVELLLEPVKTNVQCDSVYLGVITKFVPHMGGAFVNIGSARHSFMDIKSNREPFIFPPFCDGSKKQAADGSPILSMNDIPAPHEIEHASYDFEASSLLDIDSNDPGESFHDDDDEHENDEYHVSDHLAGLVNGTVVNHGAVEVGSENGHIPMERGHSADSLDSNASVAKASKVMSSKDNKWIQVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVLLTRCKRIGVSKKISGVERTRLKVIAKTLQPQGFGLTVRTVAAGHSLEELQKDLDGLLLTWKNITDEAKSAALAADEGVEGAIPALLHRAMGQTLSVVQDYFNDKVEKMVVDSPRTYHEVTHYLQDMAPDLCNRVELHDKGIPLFDLYEIEEEIEGILSKRVPLSNGGSLVIEQTEALVSIDVNGGHGMFGQGNSQEKAILEVNLAAARQIAREIRLRDIGGIIVVDFIDMADESNKRLVYEEVKKAVERDRSLVKVSELSRHGLMEITRKRVRPSVTFMISEPCSCCHATGRVEALETTFSKIEQEICRQLAKMEKRGDLENPKSWPRFILRVDSHMSSFLTTGKRTRLAILSSSLKVWILLKVARHFTRGTFEVKPFMDEKTVNERQHQVAISLLKKADAIADSSGKKKLTLIPIKKEKTSGKQRR | 3.1.26.- | COFACTOR: Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250|UniProtKB:P21513}; Note=Binds 1 Mg(2+) ion per subunit. {ECO:0000250|UniProtKB:P21513}; COFACTOR: Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000250|UniProtKB:P21513}; Note=Binds 2 Zn(2+) ions per homotetramer. Zinc ions are bound between subunits. {ECO:0000250|UniProtKB:P21513}; | chloroplast mRNA processing [GO:0010239]; chloroplast organization [GO:0009658]; chloroplast rRNA processing [GO:1901259] | chloroplast [GO:0009507]; chloroplast stroma [GO:0009570] | metal ion binding [GO:0046872]; RNA binding [GO:0003723]; RNA endonuclease activity [GO:0004521]; starch binding [GO:2001070] | PF00686;PF10150; | 2.60.40.10;2.40.50.140;3.40.1260.20; | RNase E/G family | null | SUBCELLULAR LOCATION: Plastid, chloroplast stroma {ECO:0000269|PubMed:18441049, ECO:0000269|PubMed:18515828, ECO:0000269|PubMed:22735703}. | null | null | null | null | null | FUNCTION: Involved in intercistronic processing of primary transcripts from chloroplast operons. The endonucleolytic activity of the enzyme depends on the number of phosphates at the 5' end, is inhibited by structured RNA, and preferentially cleaves A/U-rich sequences. {ECO:0000269|PubMed:18441049, ECO:0000269|PubMed:18515828, ECO:0000269|PubMed:21105931}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IVI0 | BUB1_ARATH | MTIGYRDAAGDPLFPWLMEIKNSMEDLYAGKNSGYDLDKLLFDCISTYKKDSRYRNDLRFLKIWFLYLEGREDFERVYREIEETEICKGHSLLYEWYAIFLEVKGLWRRANSVYQTGLSRKAEPFDRLKEAHSLFLQRISKRTKASSLEKVGDDAQATDLETGFVNPWETSTVNGLIHKIKPQLVKYDGYHVSNKVFPGKANLSSLQNYSRNKIIEIGGRKYQMKGCAGQGGFAQVFKAFIDSNPDEVVALKVQKPPFPWEFHMYRQLDCRIPDSQRSSFGLAQRVHVYSDYSILVCDYLSHGTLQDVINSYVVVGKSMEEVLCMYYTIEMLNMLETLHSVGIIHGDFKPDNLLIRYPPENLTETGFHEKTGSWSKKGLCLVDWGRGIDLSLFPRTTEFTGDCRTSGFRCVEMKEDKPWKFQVDTYGLCVIVHMMLHNVYMEIEKKQSLDGGYINMPRTSFKRYWKVDLWKELFTKLLNRETCEDDTETLRNLRKSMEEYICSDPKLMKKLNELLAKQRISLCSS | 2.7.11.1 | null | cell division [GO:0051301]; chromosome segregation [GO:0007059]; meiotic sister chromatid cohesion, centromeric [GO:0051754]; mitotic spindle assembly checkpoint signaling [GO:0007094]; phosphorylation [GO:0016310] | nucleus [GO:0005634]; outer kinetochore [GO:0000940] | ATP binding [GO:0005524]; protein kinase activity [GO:0004672]; protein serine kinase activity [GO:0106310]; protein serine/threonine kinase activity [GO:0004674] | PF08311;PF00069; | 1.25.40.430;1.10.510.10; | Protein kinase superfamily, Ser/Thr protein kinase family, BUB1 subfamily | PTM: Ubiquitinated and degraded during mitotic exit. {ECO:0000250}.; PTM: Upon spindle-assembly checkpoint activation it is hyperphosphorylated and its kinase activity toward CDC20 is stimulated. {ECO:0000250}. | SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. Chromosome, centromere, kinetochore {ECO:0000250}. Note=Nuclear in interphase cells. Accumulates gradually during G1 and S phase of the cell cycle, peaks at G2/M, and drops dramatically after mitosis. Localizes to the outer kinetochore. Kinetochore localization is required for normal mitotic timing and checkpoint response to spindle damage and occurs very early in prophase (By similarity). {ECO:0000250}. | CATALYTIC ACTIVITY: Reaction=ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-[protein]; Xref=Rhea:RHEA:17989, Rhea:RHEA-COMP:9863, Rhea:RHEA-COMP:11604, ChEBI:CHEBI:15378, ChEBI:CHEBI:29999, ChEBI:CHEBI:30616, ChEBI:CHEBI:83421, ChEBI:CHEBI:456216; EC=2.7.11.1; CATALYTIC ACTIVITY: Reaction=ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-threonyl-[protein]; Xref=Rhea:RHEA:46608, Rhea:RHEA-COMP:11060, Rhea:RHEA-COMP:11605, ChEBI:CHEBI:15378, ChEBI:CHEBI:30013, ChEBI:CHEBI:30616, ChEBI:CHEBI:61977, ChEBI:CHEBI:456216; EC=2.7.11.1; | null | null | null | null | FUNCTION: Serine/threonine-protein kinase that performs 2 crucial functions during mitosis: it is essential for spindle-assembly checkpoint signaling and for correct chromosome alignment. Has a key role in the assembly of checkpoint proteins at the kinetochore. Acts as a substrate for anaphase-promoting complex or cyclosome (APC/C). Necessary for ensuring proper chromosome segregation. Can regulate chromosome segregation in a kinetochore-independent manner. The BUB1-BUB3 complex plays a role in the inhibition of APC/C when spindle-assembly checkpoint is activated and inhibits the ubiquitin ligase activity of APC/C by phosphorylating its activator CDC20. Kinase activity is essential for inhibition of APC/CCDC20 and for chromosome alignment but does not play a major role in the spindle-assembly checkpoint activity (By similarity). {ECO:0000250}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IVL6 | GRV2_ARATH | MDSVSRGAVASTTGGAVEEPEYLARYLVVKHSWRGRYKRILCISSGGIVTLDPNTLAVTNSYDTGSNFDGASPLVGRDENTESVGGEFTVNVRTDGKGKFKAMKFSSRCRASILTELYRLRWNQIRPVAEFQVLHLRRRNAEWVPYKLKITFVGLELVDSKSGNSRWILDFRDMGSPAIILLSDAYRTKSADSAGFVLCPMYGRKSKAFRAAPGTTNSSIVASLAKTAKSMVGVFLSVDDSQLLTVSEYMTRRAKEAVGAEETPNGWWSVTRLRSAAHGTLNMPGLSLAIGPKGGLGEHGDAVALQLILTKASLVERRIDNYEVVIVRPLSSVSSLVRFAEEPQMFAIEFSDGCPVLVYASISRDNLLAAILDTLQTEGHCPIPVLPRLTMPGHRIDPPCGRVSLISGPQHLVADLETCSLHLKHLAAAAKDAVAEGGSVPGCRARLWRRIREFNACIPYTGVPANSEVPEVTLMALITMLPSTPNLPVDAPPLPPPSPKAAATVIGFVTCLRRLLSSRSAASHIMSFPAAVNRIMGLLRNGSEGVAAEAAGLIASLIGGWSADLSTAPDSRGEKHATIMHTKSVLFAQQGYVTILVNRLKPMSVSPLFSMAIVEVFEAMVCDPHGETTQYTVFVELLRQIAALRRRLFALFAHPAESVRETIAVIMRTIAEEDAIAAESMRDAALRDGALLRHLLNAFSLPASERREVSRQLVALWADSYQPALDLLSRVLPPGLVAYLHTRPDDVVDDTDQEGSSTNRRQKRLLQQRRGRIAKGMGAQDIPLPPGNNVEAGDAAKHMSANASVPDNFQRRAADSSSEASNPQASAFPGVDSTIAGVSQNGYPAFASVTTNANGHEQPETNASDVVGSDPNLYGIQNSVLPAPAQVIVESTAVGSGKLLLNWREFWRAFGLDHNRADLIWNERTRQELIEALKAEVHNLDVEKERTEDISPGDVEATTGQEIIPRISWNYSEFSVSYRSLSKEVCVGQYYLRLLLESGNAGKAQDFPLRDPVAFFRALYHRFQCDADMGLTIDGAVPDELGSSGDWCDMSRLDGFGGGGGASVRELCARAMAIVYEQHYNTIGPFEGTAHITALIDRTNDRALRHRLLLLLKALVKVLLNVEGCVVVGGCVLAVDLLTVVHENSERTPIPLQSNLIAATAFMEPPKEWMYIDKGGAEVGPVEKDVIRSLWSKKDIDWTTKCRALGMSDWKKLRDIRELRWAVAVRVPVLTPSQVGDAALSILHSMVSAHSDLDDAGEIVTPTPRVKRILSSTRCLPHIAQALLSGEPVIVEAGAALLKDVVTRNSKAMIRLYSTGAFYFALAYPGSNLYSIAQLFSVTHVHQAFHGGEEATVSSSLPLAKRSVLGGLLPESLLYVLERSGPAAFAAGMVSDSDTPEIIWTHKMRAENLICQVLQHLGDYPQKLSQHCHSLYDYAPMPPVTYPELRDEMWCHRYYLRNLCDEIQFPNWPIVEHVEFLQSLLVMWREELTRKPMDLSEGEACKILEISLNNVSSDDLNRTASVELNEEISNISKQIQNLDEEKLKRQYRKLAMRYHPDKNPEGREKFLAVQKAYECLQATMQGLQGPQPWRLLLLLKAQCILYRRYGHVLRPFKYAGYPMLLDAVTVDKDDNNFLSNDRSPLLVAASELVSLTCAASSLNGEELVRDGGVQLLSTLLSRCMCVVQPTTSQHEPAAIIVTNVMRTLSVISQFESARAGFLELPSLIEDIVHCTELERVPAAVDAALQSIAKVSVFPELQHGLLKAGALWYILPLLLQYDSTAEESNSVESHGVGVSIQIAKNEHALQASQALSRLTGLCADESLTPYNATAADVLKALLTPKLASLLKDEVAKDLLSKLNTNLETPEIIWNSATRSELLNFVDEQRACQCPDGSYDLKNAQSFSYDALSKEVFVGNVYLKVYNDQPDSEISEPESFCNALIDFISSLVHTELPSVSEDQNLIEDRNSSNDTPELQSSVAEPSLIEEHSDHQPSSEGMKNEECFLIDHLQLGLTALQNLLTKYPDLASVFSSKERLLPLFECFSVAIASKTDIPKLCLNVLSRLTAYAPCLETMVSDGSSLLLLLQMLHSAPSFREGALHVLYALASTPELAWAAAKHGGVVYILELLLPLQKEIPLQQRAAAASLLGKLVAQPMHGPRVAITLVRFLPDGLVSIIRDGPGEAVVHALERTTETPELVWTPAMAASLSAQIATMASDIYREQQKGSVIEWDVPEQSAGQQEMRDEPQVGGIYVRRFLKDPKFPLRNPKRFLEGLLDQYLSAMAATHYEQHPVDPELPLLLSAALVSLLRVHPALADHIGHLGYVPKLVAAVAYEGRRETMSSGEVKAEEIGSDGVNESTDPSSLPGQTPQERVRLSCLRVLHQLAASTTCAEAMAATSAGNAQVVPLLMKAIGWLGGSILALETLKRVVVAGNRARDALVAQGLKVGLIEVLLGLLDWRTGGRYGLSSHMKWNESEASIGRVLAVEVLHGFATEGAHCSKVREILDASEVWSAYKDQKHDLFLPSNTQSAAGVAGFIENSSNSLTYALTAPPPPSHP | null | null | amyloplast organization [GO:0009660]; cell division [GO:0051301]; embryo development ending in seed dormancy [GO:0009793]; embryonic axis specification [GO:0000578]; endocytosis [GO:0006897]; endosome organization [GO:0007032]; late endosome to vacuole transport [GO:0045324]; negative gravitropism [GO:0009959]; phototropism [GO:0009638]; protein targeting to vacuole [GO:0006623]; receptor-mediated endocytosis [GO:0006898]; regulation of early endosome to late endosome transport [GO:2000641]; response to starvation [GO:0042594]; vacuole organization [GO:0007033] | endoplasmic reticulum [GO:0005783]; Golgi apparatus [GO:0005794]; intracellular membrane-bounded organelle [GO:0043231]; late endosome [GO:0005770]; late endosome membrane [GO:0031902]; peroxisome [GO:0005777]; trans-Golgi network [GO:0005802]; vacuolar membrane [GO:0005774]; vacuole [GO:0005773] | null | PF00226;PF14237;PF19432; | 1.10.287.110;1.25.10.10; | null | null | SUBCELLULAR LOCATION: Endosome membrane {ECO:0000269|PubMed:17259264, ECO:0000269|PubMed:17971043}; Peripheral membrane protein {ECO:0000269|PubMed:17259264}. | null | null | null | null | null | FUNCTION: Required for endosome formation, vacuolar protein sorting and determination of the embryo growth axis. Necessary for the transport of proteins into protein storage vacuoles (PSVs). Participates in vesicle trafficking from the endosome to the central vacuole. Involved in the regulation of shoot phototropism and gravitropism, probably through the positioning of specialized amyloplasts (statoliths) in endodermal cells. {ECO:0000269|PubMed:15466218, ECO:0000269|PubMed:17259264, ECO:0000269|PubMed:17293568, ECO:0000269|PubMed:17971043}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IVV0 | RIC1_ARATH | MATTMKGLLKGLRYITQIFDEEKEQEMQIGFPTDVKHVAHIGSDGPTNTTPSWMNDFKTQEHEKGQVVSRGNSNKYNPQGTNQRGAGLKELLPSNTNEKPKQKTRRKPGGAASPNHNGSPPRKSSGNAASSDEPSKHSRHNRSAHGSTDSSNDQEPSVRRRRGGIPAPDTEVPNQIPDGSAPPRKATSRPRKLKGSSAGGEGSIKKSSKGKPENSVDTTCNDII | null | null | cell morphogenesis [GO:0000902]; cellulose microfibril organization [GO:0010215]; cytoplasmic microtubule organization [GO:0031122]; pollen tube growth [GO:0009860] | apical plasma membrane [GO:0016324]; cortical microtubule, transverse to long axis [GO:0010005] | null | PF00786; | null | null | null | SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton {ECO:0000269|PubMed:15766531}. Cytoplasm {ECO:0000269|PubMed:11752391, ECO:0000269|PubMed:15766531, ECO:0000269|PubMed:23078108}. Note=Associates with and promotes the organization of cortical microtubules in leaf epidermal pavement cells. Localizes to punctate loci in the cytoplasm of root cells. {ECO:0000269|PubMed:23078108}. | null | null | null | null | null | FUNCTION: Functions as a downstream effector of Rho-related GTP binding proteins of the 'Rho of Plants' (ROPs) family. Participates in the propagation of ROP GTPase signals in specific cellular responses. Required for cortical microtubule organization. Promotes microtubule bundling and formation of well-ordered microtubule arrays in the neck region of pavement cells. This restricts cell lateral expansion to generate the narrow neck morphology of pavement cells. Its function is inhibited when it interacts with activated ARAC4/ROP2. Represses ARAC4/ROP2 activation and antagonizes the RIC4-actin pathway that promotes the assembly of cortical actin microfilaments. Acts as a downstream effector of ARAC3/ROP6 which functions in a signaling pathway that negatively regulates clathrin-mediated endocytosis and internalization of PIN1 and PIN2. Required for the asymmetric auxin distribution during root gravitropism and vascular patterning. Positively regulates auxin responses, but negatively regulates ABA responses during lateral root development and primary root elongation. {ECO:0000269|PubMed:11752391, ECO:0000269|PubMed:15766531, ECO:0000269|PubMed:19818614, ECO:0000269|PubMed:21535258, ECO:0000269|PubMed:22683261, ECO:0000269|PubMed:23078108}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IW47 | TKTC2_ARATH | MASTSSLALSQALLTRAISHNGSENCVSIPAFSALKSTSPRTSGTISSRRRNASTISHSLRPLVRAAAVEAIVTSSDSSLVDKSVNTIRFLAIDAVEKAKSGHPGLPMGCAPMSHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVREEDLKSFRQWGSKTPGHPENFETPGVEATTGPLGQGIANAVGLALAEKHLAARFNKPDNEIVDHYTYSILGDGCQMEGISNEVCSLAGHWGLGKLIAFYDDNHISIDGDTDIAFTESVDKRFEALGWHVIWVKNGNNGYDEIRAAIREAKAVTDKPTLIKVTTTIGYGSPNKANSYSVHGAALGEKEVEATRNNLGWPYEPFHVPEDVKSHWSRHTPEGAALEADWNAKFAAYEKKYPEEAAELKSIISGELPVGWEKALPTYTPDSPGDATRNLSQQCLNALAKAVPGFLGGSADLASSNMTMLKAFGNFQKATPEERNLRFGVREHGMGAICNGIALHSPGFIPYCATFFVFTDYMRAAMRISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLSSFRAMPNIMMFRPADGNETAGAYKIAVTKRKTPSVLALSRQKLPQLPGTSIESVEKGGYTISDNSTGNKPDVILIGTGSELEIAAQAAEKLREQGKSVRVVSFVCWELFDEQSDAYKESVLPSDVSARVSIEAGSTFGWGKIVGGKGKSIGIDTFGASAPAGKLYKEFGITIEAMVEAAKSLI | 2.2.1.1 | COFACTOR: Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250}; Name=Ca(2+); Xref=ChEBI:CHEBI:29108; Evidence={ECO:0000250}; Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Evidence={ECO:0000250}; Name=Co(2+); Xref=ChEBI:CHEBI:48828; Evidence={ECO:0000250}; Note=Binds 1 Mg(2+) ion per subunit. Can also utilize other divalent metal cations, such as Ca(2+), Mn(2+) and Co(2+). {ECO:0000250}; COFACTOR: Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937; Evidence={ECO:0000250}; Note=Binds 1 thiamine pyrophosphate per subunit. {ECO:0000250}; | pentose-phosphate shunt [GO:0006098]; reductive pentose-phosphate cycle [GO:0019253] | chloroplast [GO:0009507]; chloroplast stroma [GO:0009570]; chloroplast thylakoid membrane [GO:0009535]; cytosol [GO:0005829]; nucleus [GO:0005634]; plastid [GO:0009536] | metal ion binding [GO:0046872]; transketolase activity [GO:0004802] | PF02779;PF02780;PF00456; | 3.40.50.920;3.40.50.970; | Transketolase family | null | SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane. Plastid, chloroplast stroma {ECO:0000269|PubMed:18431481}. | CATALYTIC ACTIVITY: Reaction=D-glyceraldehyde 3-phosphate + D-sedoheptulose 7-phosphate = aldehydo-D-ribose 5-phosphate + D-xylulose 5-phosphate; Xref=Rhea:RHEA:10508, ChEBI:CHEBI:57483, ChEBI:CHEBI:57737, ChEBI:CHEBI:58273, ChEBI:CHEBI:59776; EC=2.2.1.1; | null | PATHWAY: Carbohydrate biosynthesis; Calvin cycle. | null | null | FUNCTION: Catalyzes the reversible transfer of a two-carbon ketol group from fructose-6-phosphate or sedoheptulose-7-phosphate to glyceraldehyde-3-phosphate to yield xylulose-5-phosphate and erythrose-4-phosphate or ribose-5-phosphate, respectively (By similarity). Could act as a stress sensor involved in adaptation process. {ECO:0000250, ECO:0000269|PubMed:22214485}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IXE7 | IDM1_ARATH | MLPGAEIEMLGGDCFEGSYEDHQIFREVFFGSDPGNTTKRCLVTGAINFECDSSKNVNSSLSSNSVVTSGYACPQGFEASASRDGSDFNTKAKRVKLSGNKHLDARDEKGSALHGFPTSDIARETIPLHLVESSNKGVSTSSYLLKHSIVKGREVYLGGIVSGKCKSLNLDKCDGKEFKAIASPVSQESFATRMISVGASTPHSEKACFPLQLNNGSKVSPNELIMSKTCLKIDPKEDPRPLLYKYVCKVLTAARWKIEKRERSAGRKHVDTFYISPEGRKFREFGSAWKALGGILLADRKLMDTGTKKWTGINDFWSDLSLTLLDIEENMKNLNLANTRALWWSALEPFVVVVFISKQVGSLRKGNKVEVARNSNPDKLKKEDTICLNLISGCPESVLTVSEGSHLVHDVDANQEIHSDLEVQTKISSQKVSSRLERQSIIGKEISGTHEQEASKGIVASKLIAEDMHESVMRKNLHRRSKKISDIKPASLDQHDSLDSNSLNSFEFQDKEMGNIHLVSKGSRDERLRNEKMNNSCCNSKKGRKKARKHYTQDDDLMGSTITRNKGKFSRSSQKKKTQKPKARTKKRNNRGGCRLLPRSSSNVENHFFQGNWSILGPRTVLSWLIATKVISRDEVIQLRDPDDDTVVKTGLVTKDGVVCTCCNKTVSLSEFKNHAGFNQNCPCLNLFMGSGKPFASCQLEAWSAEYKARRNGWRLEKASDDDPNDDSCGVCGDGGELICCDNCPSTFHQACLSMQVLPEGSWYCSSCTCWICSELVSDNAERSQDFKCSQCAHKYHGTCLQGISKRRKLFPETYFCGKNCEKVYNGLSSRVGIINPNADGLSWSILKCFQEDGMVHSARRLALKAECNSKLAVALSIMEESFLSMVDPRTGIDMIPHVLYNWGSTFARLDFDGFYTVVVEKDDVMISVASIRVHGVTIAEMPLVATCSKYRRQGMCRILVAAIEEMLMSLKVEKLVVAALPSLVETWTEGFGFKPMDDEERDALKRINLMVFPGTTLLKKTLYESTKPSTMKGVCLSKERNNPSNKEADLEPGLDKAGSPMSTQVESCDQMVPAGSDDEPSPGFPVPLGADQTEPTSETENPSRDSNANDRPNKTTVVSIGEEEEEECLQKDVSKLSEEGKETTRASSSSAALEEVSGLGLGVVNNVSDEMLLCVDEQLDSDSSQDSE | 2.3.1.- | null | gene silencing by RNA-directed DNA methylation [GO:0080188]; regulation of DNA methylation [GO:0044030]; regulation of transcription by RNA polymerase II [GO:0006357] | nucleus [GO:0005634]; plasmodesma [GO:0009506] | double-stranded methylated DNA binding [GO:0010385]; histone acetyltransferase activity [GO:0004402]; histone binding [GO:0042393]; metal ion binding [GO:0046872] | PF00628;PF16135; | 3.40.630.30;3.30.40.10; | null | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:22700931, ECO:0000269|PubMed:22733760, ECO:0000269|PubMed:24920332, ECO:0000269|PubMed:25002145}. Note=Colocalizes with IDM2 within nucleoplasmic and nucleolar foci. {ECO:0000269|PubMed:24920332, ECO:0000269|PubMed:25002145}. | null | null | null | null | null | FUNCTION: Histone H3 acetyltransferase that binds methylated DNA at chromatin sites lacking histone H3K4 di- or trimethylation and catalyzes H3K18 and H3K23 acetylation (PubMed:22700931, PubMed:22733760). Prevents the transcriptional silencing of transgenes and of some endogenous genes (PubMed:22700931, PubMed:22733760). Requires the presence of IDM2 for efficient H3K18 acetylation, but not for H3K23 acetylation (PubMed:25002145). {ECO:0000269|PubMed:22700931, ECO:0000269|PubMed:22733760, ECO:0000269|PubMed:25002145}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IXW2 | BIG5_ARATH | MAAGGFLTRAFDTMLKESGGKKFPDLQKAIQAYQDGSKVVTQAAPSSIVESSQAEGGGEKTGVEADEPQKVTSAEVAQQASQSKSETINVSLANAGHTLGGAEVELVLKPLRLAFETKNLKIFDAALDCLHKLIAYDHLEGDPGLDGGKNSAPFTDILNMVCSCVDNSSPDSTVLQVLKVLLTAVASGKFKVHGEPLLGVIRVCYNIALNSKSPINQATSKAMLTQMISIVFRRMETDIVSASSTVSQEEHVSGDTSSPKNEEITAADENEKEMTLGDALTQAKDTTLASVEELHTLVGGADIKGLEAALDKAVHLEDGKKIKRGIELESMSIGQRDALLVFRTLCKMGMKEDSDEVTTKTRILSLELLQGMLEGVSHSFTKNFHFIDSVKAYLSYALLRASVSQSSVIFQYASGIFSVLLLRFRDSLKGEIGIFFPIIVLRSLDNSECPNDQKMGVLRMLEKVCKDPQMLVDVYVNYDCDLEAPNLFERMVTTLSKIAQGSQSADPNPAMASQTASVKGSSLQCLVNVLKSLVDWEKIRREAENSTRNANEDSASTGEPIETKSREDVPSNFEKAKAHKSTMEAAISEFNRNSVKGVEYLIANKLVERNPASVAQFLRSTSSLSKVMIGDYLGQHEEFPLAVMHAYVDSMKFSEMKFHSAIREFLKGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNADTAYVLAYAVIMLNTDAHNPMVWPKMSKSDFTRMNATNDPEDCAPTELLEEIYDSIVQEEIKLKDDDTMKKLSSQRPGGEERGGLVSILNLGLPKRISAADAKSETEDIVRKTQEIFRKHGVKRGVFHTVEQVDIIRPMVEAVGWPLLAAFSVTMEVGDNKPRILLCMEGFKAGIHIAYVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRILLGLCDSEPDTLQDTWNAVLECVSRLEFIISTPGIAATVMHGSNQISRDGVVQSLKELAGRPAEQVFVNSVKLPSESVVEFFTALCGVSAEELKQSPARVFSLQKLVEISYYNIARIRMVWARIWSVLAEHFVSAGSHHDEKIAMYAIDSLRQLGMKYLERAELTNFTFQNDILKPFVIIMRNTQSQTIRSLIVDCIVQMIKSKVGSIKSGWRSVFMIFTAAADDEVESIVEKSFENVEQVILEHFDQVIGDCFMDCVNCLIRFANNKASDRISLKAIALLRICEDRLAEGLIPGGVLKPVDGNEDETFDVTEHYWFPMLAGLSDLTSDYRPEVRNCALEVLFDLLNERGNKFSTPFWESIFHRILFPIFDHVSHAGKESLISSGDVKFRETSIHSLQLLCNLFNTFYKEVCFMLPPLLSLLLDCAKKSDQTVVSISLGALVHLIEVGGHQFSEGDWDMLLKSIRDASYTTQPLELLNALSFDNPKKNLVLAGDIEADASDSPRVDRNPDDIKDNGKVSAQASPRIGTHGTSLESGIPPKADGSEGRPSSSGRAQKDVDDVNLQRSQTFGQRFMDNLFLRNLTSQPKSSVAEVTVPSSPYKHEDPTEPDSREEESPALGAIRGKCITQLLLLGAINSIQQKYWSNLKTPQKIAIMDILFSFIEFASSYNSYSNLRTRMNHIPTERPPLNLLRQELEGTTIYLDVLQKTTSGLADDASNSEDRLEGAAEEKLVSFCEQVLKETSDLQSTLGETTNMDVHRVLELRSPVIVKVLEGMCFMNNTIFRKHMREFYPLLTRLVCCEQMEIRGALANLFKAQLKPLLQQ | null | null | auxin-activated signaling pathway [GO:0009734]; defense response to bacterium [GO:0042742]; endocytosis [GO:0006897]; immune response [GO:0006955]; innate immune response [GO:0045087]; intracellular protein transport [GO:0006886]; regulation of ARF protein signal transduction [GO:0032012]; regulation of auxin polar transport [GO:2000012]; regulation of root morphogenesis [GO:2000067]; regulation of vesicle fusion [GO:0031338]; vesicle-mediated transport [GO:0016192] | cytosol [GO:0005829]; early endosome [GO:0005769]; early endosome membrane [GO:0031901]; trans-Golgi network [GO:0005802] | guanyl-nucleotide exchange factor activity [GO:0005085] | PF20252;PF16213;PF01369;PF09324;PF12783; | 1.10.220.20;1.10.1000.11;1.25.10.10; | null | PTM: Ubiquitinated. {ECO:0000269|PubMed:16840699}. | SUBCELLULAR LOCATION: Cytoplasm, cytosol {ECO:0000250}. Golgi apparatus, trans-Golgi network membrane {ECO:0000269|PubMed:19230664, ECO:0000269|PubMed:21670267}; Peripheral membrane protein; Cytoplasmic side. Early endosome membrane {ECO:0000269|PubMed:19230664, ECO:0000269|PubMed:21670267, ECO:0000269|PubMed:23737757}; Peripheral membrane protein; Cytoplasmic side. Note=Soluble and partially membrane-bound. | null | null | null | null | null | FUNCTION: Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting. Acts as the major regulator of early endosomal vesicle trafficking, particularly at the trans-Golgi-network/early endosome (TGN/EE), but is also involved in the endocytosis process (PubMed:23737757). Together with VPS45/BEN2 required for polar PIN-FORMED (PIN) proteins localization, for their dynamic repolarization, and consequently for auxin activity gradient formation and auxin-related developmental processes (e.g. embryonic patterning, organogenesis and vasculature venation patterning) (PubMed:23737757). Target of hopM1, a conserved Pseudomonas syringae virulence protein that directs the protein to its own proteasome-mediated degradation. Plays a broad role in PAMP-triggered immunity (PTI), effector-triggered immunity (ETI), and salicylic acid (SA)-regulated immunity. {ECO:0000269|PubMed:19230664, ECO:0000269|PubMed:21670267, ECO:0000269|PubMed:23737757}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IY62 | UGPA3_ARATH | MANPQASPILHHPQNHLSLFHFRTTTSPRSFSSLHFRKPLLFLSSSSSFSSKLQQSEQQCNNHQVRHVSTVPVEYSTPTPPESDDFLSEIDRLKSLLSKLDVSKDLRRKDAVIDADSRVRRFFSENRGGLSKVFGYLGLNSNEMFLVKCVIAAGQEHALCMNYEEAFGEEEEEYTVRSSVKNALYALVEMIERFDVNSSGYKGRREMGTVLDSEEIAHFRKFLTFLEEIEQFYDCIGGIIGYQVMVLELLHQSSKRRNTNRSQLVEESLGCQYLEMHTPSVLDLTQEEDYASQAALWGIEGLPDLGEIYPLGGAADRLGLIDSETGECLPAAMLAHCGRTLLEGLIRDLQAREFLYFKLYGKQCVTPVAIMTSAAKNNHEHVSSLCERLKWFGRGQSNFRLFEQPLVPAVSAEDGQWIVSKPFVPVSKPGGHGVIWKLAYDKGVFNWFYDHGRKGATVRQVSNVVAATDVTLLALAGIGLRYNKKLGFASCKRNAGATEGINVLMEKKNFDGKWEYGISCIEYTEFDKFDISNRSPSSNGLQADFPANTNILYVDLHSAELIGSSSNAKSLPNMVLNTKKRIEYLDQYGDYHSVMGGRLECTMQNIADNFFNKFPSRCHGSLEDKLDTYIVYNERRKVTSSAKKKKPHASAALHQTPDGALLDILRNGYDLLTECDIKLPMIEANDKYVDSPPPYLILLHPALGPLWEVSRQKFKGGSISSCSELQLEIAEFSWNNVQVDGSLIVTAENAMGSTTPNDNGEPILQYGLRCGKCKLHNVNVVNRGIDWNSKSNVYWRNDVNRLETCKIILHGNAEFEASNVTIEGHHVFEVPDGHKLKITSGNAGLSINLEALKEEVMETGSWYWNYQLNGSHIHLQQVEVSQS | 2.7.7.9 | COFACTOR: Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000269|PubMed:19286968}; | sulfolipid biosynthetic process [GO:0046506]; UDP-glucose metabolic process [GO:0006011]; UDP-N-acetylglucosamine biosynthetic process [GO:0006048] | chloroplast [GO:0009507] | UDP-N-acetylglucosamine diphosphorylase activity [GO:0003977]; UTP:glucose-1-phosphate uridylyltransferase activity [GO:0003983] | PF01704; | null | UDPGP type 1 family | null | SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000269|PubMed:19286968}. | CATALYTIC ACTIVITY: Reaction=alpha-D-glucose 1-phosphate + H(+) + UTP = diphosphate + UDP-alpha-D-glucose; Xref=Rhea:RHEA:19889, ChEBI:CHEBI:15378, ChEBI:CHEBI:33019, ChEBI:CHEBI:46398, ChEBI:CHEBI:58601, ChEBI:CHEBI:58885; EC=2.7.7.9; Evidence={ECO:0000269|PubMed:19286968}; | BIOPHYSICOCHEMICAL PROPERTIES: Kinetic parameters: KM=0.24 mM for glucose 1-phosphate {ECO:0000269|PubMed:19286968}; KM=0.031 mM for UTP {ECO:0000269|PubMed:19286968}; | null | null | null | FUNCTION: Involved in the biosynthesis of sulfolipids in the chloroplast. Catalyzes the first committed step in sulfolipid biosynthesis. Converts glucose 1-phosphate to UDP-glucose, the precursor of the polar head of sulfolipid. In addition to glucose 1-phosphate, can use galactose 1-phosphate, but with much lower activity. No uridyltransferase activity with other hexose monophosphates. Specific for UTP and cannot use ATP, CTP, and GTP. {ECO:0000269|PubMed:19286968}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IYH6 | AIPP2_ARATH | MADRRVGNRPMGRRGRLEIQSGTCNVCSAPCSSCMHHNAEFSGSKSDESSDENSHGVLASQCSFNGDNLLRSSGVNAPGSSHNTSSEASHLVNSNHDTSSENAESKEIIRSSDISHGPLLDRPHKDQDSMKVDSCNDHQARSTLGQGKVKEKSGAKNNEEKKNTLTGSSKHSGPRVGKSGENVLLNKADESNTSAMSDSESENDPEMLELDVKVCDTCGDAGREDLLAICSRCSDGAEHTYCMRVMLKKVPKGYWLCEECKFAEKAEKHKLETKRKRESEVNVNTQISSKRHIDKFEAVPDSKRLAVGAQIGSPKRSVLPRMSTLSRETSFKGLEKPTRKLAHYSSFNSHSSDDTESTRSTDSQLQSPKGSFLKSNSFNSLSSRSKVRPVDDDMLPRQKTGNENSSLEVKEGFSKNVGKSMSSRCIDVGSSNCNDSKVKGSKQLKDWSTEANPSASISRGNSSIPYAKSPRDLKDLQSDGKQGSLSKQARHLSRNRLEDIVASVGDSSKNEKCSSSEQISSEAKCKDELAQVDGVPRSREFREAGEKTKDAVGNHQKRNIGEDNNKGNRLRAAVDAALRKKPSFSKNRGLEQSDLPPVSNVDSGCNKALKCLSSKVPVIRDWPVGFQGLPGGHPNLRTDKQTNTVNEKQFTLAGTDATTASQSVEPEVNDPSVQSVMRDLPVAAPNVLSTTSAIPKPEYIWQGDLEVQKSRNLSAMHSGIQAYLSTLASPKVVEVVKQFPEKVTLNEVPRLSSWPAQFQDTGAKEQHVALFFFAKDIESYEKNYKPLVDNMIQKDLALKGNLEGVELLIFASNQLPQDCQRWNMLFFLWGVFRGKKESCSNPPKNTPLPASCVSPNRDTFRHENPSNKKSLTDRTLSRMQSCMKEEDAKEGKACSGTEKENAFSVSYGEGEVDVETEEGEIGVSPQLKYEKTAGPGTVKSADMNQRVNVDDLNKEGLCEGPANKKLKTVTGVETGCSIVRRDTSVHKFASRKFV | null | null | negative regulation of gene expression, epigenetic [GO:0045814]; negative regulation of transcription elongation by RNA polymerase II [GO:0034244]; regulation of photoperiodism, flowering [GO:2000028] | null | histone binding [GO:0042393]; histone reader activity [GO:0140566]; metal ion binding [GO:0046872] | null | 3.30.40.10; | null | null | null | null | null | null | null | null | FUNCTION: Together with AIPP3/BDT1 and PAIPP2, cooperates to form a BAH-PHD bivalent histone reader complex able to read histone H3 lysine 27 trimethylation (H3K27me3) and low-methylated H3K4 histone marks in order to regulate transcription, especially to prevent early flowering; promotes AIPP3/BDT1 binding to H3K27me3 (PubMed:33277495, PubMed:33433058). CPL2 is subsequently recruited to form a BAH-PHD-CPL2 complex (BPC) in order to silence several H3K27me3 and low-methylated H3K4 enriched loci, including AGO5, via the phosphorylation state-dependent inhibition of Pol II release from the transcriptional start site (e.g. Ser5P-Pol II dephosphorylation) (PubMed:33277495). The BPC complex represses flowering by inhibiting the expression of several genes, including AGL6, FT, FUL and SOC1 (PubMed:33277495). Prevents the accumulation of intronic heterochromatin-containing genes (e.g. IBM1, At3g05410 and RPP7) (PubMed:28808009). {ECO:0000269|PubMed:28808009, ECO:0000269|PubMed:33277495, ECO:0000269|PubMed:33433058}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IYM4 | DEX1_ARATH | MKSRARQCLLVCLLCLSLTNLSYGENKFRERKATDDELGYPDIDEDALLNTQCPKKLELRWQTEVTSSVYATPLIADINSDGKLDIVVPSFVHYLEVLEGADGDKMPGWPAFHQSNVHSSPLLFDIDKDGVREIALATYNAEVLFFRVSGFLMSDKLEVPRRKVHKNWHVGLNPDPVDRSHPDVHDDVLEEEAMAMKSSTTQTNATTTTPNVTVSMTKEVHGANSYVSTQEDQKRPENNQTEAIVKPTPELHNSSMDAGANNLAANATTAGSRENLNRNVTTNEVDQSKISGDKNETVIKLNTSTGNSSETLGTSGNSSTAETVTKSGRRLLEEDGSKESVDSHSDSKDNSEGVRMATVENDGGLEADADSSFELLRENDELADEYSYDYDDYVDEKMWGDEEWVEGQHENSEDYVNIDAHILCTPVIADIDKDGVQEMIVAVSYFFDPEYYDNPEHLKELGGIDIKNYIASSIVVFNLDTKQVKWIKELDLSTDKANFRAYIYSSPTVVDLDGDGYLDILVGTSFGLFYAMDHRGNIREKFPLEMAEIQGAVVAADINDDGKIELVTTDSHGNIAAWTTQGVEIWEAHLKSLVPQGPSIGDVDGDGHTEVVVPTSSGNIYVLSGKDGSIVRPYPYRTHGRVMNQLLLVDLNKRGEKKKGLTIVTTSFDGYLYLIDGPTSCTDVVDIGETSYSMVLADNVDGGDDLDLIVSTMNGNVFCFSTPSPHHPLKAWRSSDQGRNNKANRYDREGVFVTHSTRGFRDEEGKNFWAEIEIVDKYRYPSGSQAPYNVTTTLLVPGNYQGERRITQSQIYDRPGKYRIKLPTVGVRTTGTVMVEMADKNGLHFSDEFSLTFHMYYYKLLKWLLVLPMLGMFGLLVILRPQEAVPLPSFSRNTDL | null | null | cell wall organization [GO:0071555]; pollen exine formation [GO:0010584]; pollen wall assembly [GO:0010208] | cytosol [GO:0005829]; endoplasmic reticulum [GO:0005783]; Golgi cis cisterna [GO:0000137]; membrane [GO:0016020]; plasma membrane [GO:0005886] | calcium ion binding [GO:0005509] | PF01839;PF13517; | 2.130.10.10; | null | null | SUBCELLULAR LOCATION: Cell membrane {ECO:0000255}; Single-pass type I membrane protein {ECO:0000255}. | null | null | null | null | null | FUNCTION: Required for exine pattern formation during pollen development, especially for primexine deposition. {ECO:0000269|PubMed:11743117}. | Arabidopsis thaliana (Mouse-ear cress) |
F4IZR5 | XPO1B_ARATH | MAAEKLRDLSQPIDVVLLDATVEAFYSTGSKEERASADNILRDLKANPDTWLQVVHILQNTSSTHTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISDVIVQLSRDEASFRTERLYVNKLNIILVQIVKQEWPAKWKSFIPDLVIAAKTSETICENCMAILKLLSEEVFDFSKGEMTQQKIKELKQSLNSEFQLIHELCLYVLSASQRQELIRATLSALHAYLSWIPLGYIFESPLLEILLKFFPVPAYRNLTLQCLSEVASLNFGDFYDMQYVKMYSIFMNQLQAILPLNLNIPEAYSTGSSEEQAFIQNLALFFTSFFKLHIKILESAPENISLLLAGLGYLISISYVDDTEVFKVCLDYWNSLVLELFGTRHHACHPALTPSLFGLQMAFLPSTVDGVKSEVTERQKLYSDPMSKLRGLMISRTAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEKQMLSKLSKQLSGEEWAWNNLNTLCWAIGSISGSMVVEQENRFLVMVIRDLLSLCEVVKGKDNKAVIASNIMYVVGQYSRFLRAHWKFLKTVVHKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVIVQVGESEPFVSELLSGLATIVGDLQPHQIHTFYESVGSMIQAESDPQKRGEYLQRLMALPNQKWAEIIGQARQSADILKEPDVIRTVLNILQTNTRVATSLGTFFLSQISLIFLDMLNVYRMYSELVSSSIANGGPYASRTSLVKLLRSVKREILKLIETFLDKAENQPHIGKQFVPPMMDQVLGDYARNVPDARESEVLSLFATIINKYKVVMRDEVPLIFEAVFQCTLEMITKNFEDYPEHRLKFFSLLRAIATFCFRALIQLSSEQLKLVMDSVIWAFRHTERNIAETGLNLLLEMLKNFQKSDFCNKFYQTYFLQIEQEVFAVLTDTFHKPGFKLHVLVLQHLFSLVESGSLAEPLWDAATVPHPYSNNVAFVLEYTTKLLSSSFPNMTTTEVTQFVNGLYESRNDVGRFKDNIRDFLIQSKEFSAQDNKDLYAEEAAAQMERERQRMLSIPGLIAPSEIQDDMADS | null | null | embryo sac development [GO:0009553]; mRNA transport [GO:0051028]; pollen development [GO:0009555]; pollen germination [GO:0009846]; pollen tube growth [GO:0009860]; protein export from nucleus [GO:0006611]; ribosomal large subunit export from nucleus [GO:0000055]; ribosomal small subunit export from nucleus [GO:0000056] | cytoplasm [GO:0005737]; nuclear membrane [GO:0031965]; nuclear pore [GO:0005643]; plasmodesma [GO:0009506] | nuclear export signal receptor activity [GO:0005049]; small GTPase binding [GO:0031267] | PF08767;PF18777;PF18784;PF18787;PF03810;PF08389; | 1.25.10.10; | Exportin family | null | SUBCELLULAR LOCATION: Nucleus, nuclear pore complex {ECO:0000250|UniProtKB:Q9TVM2}. Nucleus membrane {ECO:0000250|UniProtKB:Q9TVM2}; Peripheral membrane protein {ECO:0000250|UniProtKB:Q9TVM2}; Nucleoplasmic side {ECO:0000250|UniProtKB:Q9TVM2}. | null | null | null | null | null | FUNCTION: Receptor for the leucine-rich nuclear export signal (NES). Binds cooperatively to the NES on its target protein and to the small GTPase Ran in its active GTP-bound form (By similarity). Required for the maternal-to-embryonic transition and during gametophyte development (PubMed:18791220). {ECO:0000250|UniProtKB:Q9SMV6, ECO:0000269|PubMed:18791220}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J061 | IQD5_ARATH | MGASGRWIKALVGFTKSDKSRSSKKDENVKVATKSRFGRKNSVDFDFEKFQDGFEDSNTRSMVDTGVSTSTSLQSYGGVAYDEQSRENRAATRIQTAYRGFLARRALRALKGLVRLQALVRGHAVRKQAAVTLRCMQALVRVQARVRARRVRLALELESETSQQTLQQQLADEARVREIEEGWCDSIGSVEQIQAKLLKRQEAAAKRERAMAYALTHQWQAGTRLLSAHSGFQPDKNNWGWNWLERWMAVRPWENRFLDSNLRDDAKLGENGMEQSENVPKTQIKSVSKMPNTSNLVSGVSSQMTGPCQSDGDSSSPGISSSIPVVSKAKSKPAKDDLAVEVNSRPGAGPRSHSNPKERSREPNRSSKERLSLPNSGKSLGSQSTKANRAGKLTPASQKVVEEKSAQNQRRRNSDPIKQRLA | null | null | anisotropic cell growth [GO:0051211]; intracellular signal transduction [GO:0035556]; leaf pavement cell development [GO:0090436]; microtubule-based process [GO:0007017]; protein localization to cortical microtubule cytoskeleton [GO:0072699]; regulation of cellulose biosynthetic process [GO:2001006]; regulation of microtubule cytoskeleton organization [GO:0070507] | cortical microtubule [GO:0055028]; membrane [GO:0016020]; nuclear envelope [GO:0005635]; phragmoplast [GO:0009524]; plasma membrane [GO:0005886]; preprophase band [GO:0009574]; spindle microtubule [GO:0005876] | calmodulin binding [GO:0005516] | PF00612; | 1.20.5.190; | IQD family | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00768}. Cytoplasm, cytoskeleton {ECO:0000269|PubMed:28115582, ECO:0000269|PubMed:29976837, ECO:0000269|PubMed:30407556}. Cytoplasm, cytoskeleton, spindle {ECO:0000269|PubMed:29976837}. Cytoplasm, cytoskeleton, phragmoplast {ECO:0000269|PubMed:29976837}. Note=Localized to microtubules (MTs) arrays in dynamic pattern, including cortical MT in leaf pavement and hypocotyl epidermal cells (in a discontinuous and punctate manner corresponding to indentation regions), as well as preprophase bands, mitotic spindles, and phragmoplasts of mitotic cells in root tips. {ECO:0000269|PubMed:29976837, ECO:0000269|PubMed:30407556}. | null | null | null | null | null | FUNCTION: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin (CaM) calcium sensor proteins to cortical microtubule arrays, thus being a potential scaffold in cellular signaling and trafficking (PubMed:29976837, PubMed:30407556). Binds to microtubules (MTs) and promotes MT assembly and dynamics to modulate pavement cell (PC) morphogenesis via cellulose deposition-dependent anisotropic cell expansion triggered by cellulose synthase complexes (CSCs) (PubMed:29976837, PubMed:30407556). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity). {ECO:0000250|UniProtKB:Q9SF32, ECO:0000269|PubMed:29976837, ECO:0000269|PubMed:30407556}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J077 | PATH1_ARATH | MERSDSRDLYNFVRASSLDKNSTLFDASQYEFFGQNLDDMELGGLDDDGVIAPVLGHADDDEYHLFDKGEGAGLGSLSDMDDLATTFAKLNRVVTGPKHPGVIGDRGSGSFSRESSSATDWTQDAELTSWLDEQDQEAKRWSSQPQSFAHSKPLYRTSSYPQQQPQLQHYNSEPIILPESNFTSFPPPGNRSPQASPGNLHRAPSLPGGSQLTYSAPSPLSNSGFHLSGLSQGPHYGGNLTRYASCGPTLGNMVQPHWVTDPGHLHGDHSGLLHNLVQQQHQQLPPRNAIMSQHLLALQQRQSYAQLAALQSQLYSSYPSPSRKVPFGVGEVREHKHKSSHRSRKNRGLSQQTSDAASQKSETGLQFRSKHMTSEEIESILKMQHSNSHSNDPYVNDYYHQAKLAKKSAGSKAISHFYPAQLKDHQPRSRNSSEQHPQVHVDALGKITLPSVRRPHALLEVDSSPGFNDGSGDHKGSGKHLEQEPLVAARVTIEDALGVLIDIVDIDRTLQNTRPQDGGAQLKRKRQILLEGLATALQLADPFSKTGQKSGMTAKDDIVFLRIATLPKGRKLLTKYLQLLVPGTENARVVCMAIFRHLRFLFGGLPSDTLAAETISNLAKAVTVCVQAMDLRALSACLAAVVCSSEQPPLRPIGSSAGDGASVVLISLLERAAEVVVVPRVMHGNSNDGLWRASFDEFFNLLTKYCRSKYDTIRGQNQGSAADVLELAIKREMPAELLRASLRHTNDDQRNYLLNFGRKPSAISESASHARGGQINSESVRG | null | null | cell cycle [GO:0007049]; cell division [GO:0051301]; deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0000290]; mRNA processing [GO:0006397]; P-body assembly [GO:0033962]; stem cell population maintenance [GO:0019827] | endoplasmic reticulum [GO:0005783]; Lsm1-7-Pat1 complex [GO:1990726]; nucleus [GO:0005634]; P-body [GO:0000932] | RNA binding [GO:0003723] | null | null | null | null | null | null | null | null | null | null | FUNCTION: Activator of mRNA decapping. Involved in mRNA decay via decapping (By similarity). Involved in the regulation of root stem cell niche identity. Maintains root stem cell niche stability through the interaction with the negative regulator of jasmonate signaling AFPH2/NINJA, and the regulation of cell division (PubMed:26956135). {ECO:0000250|UniProtKB:Q0WPK4, ECO:0000269|PubMed:26956135}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J0D2 | PBL36_ARATH | MATKLESFKVVEKLGVEKGEKGKMMSKKKNVKKDGDESESGFWFRFKFIFSCISSRSKVDSSMNATAVIAEPKKVIEKLEGHPAPTKDTGCAESGSSTPLMSGELKYSSKLRIFMFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNPDGLQGHKEWLAEINFLGNLVHPSLVKLVGYCMEEDQRLLVYEFMPRGSLENHLFRRTLPLPWSVRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDAPDEKKSHVSTRVMGTYGYAAPEYVMTGHLTTKSDVYSFGVVLLEILTGRRSVDKSRPNGEQNLVEWVRPHLLDKKRFYRLLDPRLEGHYSIKGAQKATQVAAQCLNRDSKARPKMSEVVEALKPLPNLKDFASSSSSFQTMQPVAKNGVRTQGGGFVSRNGPPMRSLSSLNLPQASPYRYARQSPKPKGKEP | 2.7.11.1 | null | defense response [GO:0006952]; lipopolysaccharide-mediated signaling pathway [GO:0031663]; pattern recognition receptor signaling pathway [GO:0002221]; phosphorylation [GO:0016310] | plasma membrane [GO:0005886] | ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674] | PF07714; | 1.10.510.10; | Protein kinase superfamily, Ser/Thr protein kinase family | PTM: Phosphorylated by SD129 in response to the pathogen-associated molecular pattern (PAMP) 3-OH-C10:0, a medium-chain 3-hydroxy fatty acid. {ECO:0000269|PubMed:31922267}. | SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:31922267}; Lipid-anchor {ECO:0000250|UniProtKB:O48814}. | CATALYTIC ACTIVITY: Reaction=ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-[protein]; Xref=Rhea:RHEA:17989, Rhea:RHEA-COMP:9863, Rhea:RHEA-COMP:11604, ChEBI:CHEBI:15378, ChEBI:CHEBI:29999, ChEBI:CHEBI:30616, ChEBI:CHEBI:83421, ChEBI:CHEBI:456216; EC=2.7.11.1; Evidence={ECO:0000250|UniProtKB:Q9LFP7}; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:17990; Evidence={ECO:0000250|UniProtKB:Q9LFP7}; CATALYTIC ACTIVITY: Reaction=ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-threonyl-[protein]; Xref=Rhea:RHEA:46608, Rhea:RHEA-COMP:11060, Rhea:RHEA-COMP:11605, ChEBI:CHEBI:15378, ChEBI:CHEBI:30013, ChEBI:CHEBI:30616, ChEBI:CHEBI:61977, ChEBI:CHEBI:456216; EC=2.7.11.1; Evidence={ECO:0000250|UniProtKB:Q9LFP7}; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:46609; Evidence={ECO:0000250|UniProtKB:Q9LFP7}; | null | null | null | null | FUNCTION: Involved in chitin-triggered immune signaling and is required for reactive oxygen species (ROS) production (PubMed:29907700). Acts downstream of SD129 in defense signaling triggered by the pathogen-associated molecular pattern (PAMP) 3-OH-C10:0, a medium-chain 3-hydroxy fatty acid (PubMed:31922267). {ECO:0000269|PubMed:29907700, ECO:0000269|PubMed:31922267}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J0W4 | MIRO2_ARATH | MMLGGKSSAGGRTSLRVAVAGDKGTGKSSLISAVASETFPDNVPRVLPPITLPADAFPDYIPITIVDTPSSIDNRIKLIEEFRKADVVLLTYACDQPSTLDRLSSYWLPELRRLEIKAPVIVVGCKLDLRDERSPARLEDIMSPIMKEYREIETCIECSALTLIQVPDVFYFASKAVLHPTFPLFDQEKQCLKPRLRRAVQRIFNLCDHDLDGALNDAELNDFQVNCFGAPLDPVELMGVKKVVQERQPDGVTDLGLTLPGFLFLFSLFIERGRPETAWAILRKCGYNDSLELHAELLPVPAKQSPDQSIELTNEAMDFLSGIFQLYDLDNDGALQPAELDDLFQTAPDSPWLEDPYKEAAEKTPGGSLTINGFLSEWALMTLLDPRKSLANLTYIGYGHDPASTFSVTRKRSVDRKKQRTERNVFQCFVFGPKKSGKSALLDSFLGRKFSNSYKATMGERYAANVIDQPGGSKKTLILREIPEDRVKKFLTNKESLAACDVAVVVYDSSDVYSWRKAREILMEVARRGEERGYGTPCLLVAAKDDLDPYPMSVQESDRVCMELGIDIPVSLSMKLGEPNSLFSRIVSTAENPHMSIPETESGRRSRNIRQLVNSSLLFVSVGTAVGFAGLAAYRAYSARKNA | 3.6.5.- | null | mitochondrion organization [GO:0007005]; positive regulation of protein localization to ciliary membrane [GO:1903569]; response to abscisic acid [GO:0009737] | mitochondrial outer membrane [GO:0005741]; mitochondrion [GO:0005739]; plasma membrane protein complex [GO:0098797] | calcium ion binding [GO:0005509]; GTP binding [GO:0005525]; GTPase activity [GO:0003924] | PF08355;PF08356;PF00071; | 1.10.238.10;3.40.50.300; | Mitochondrial Rho GTPase family | null | SUBCELLULAR LOCATION: Mitochondrion outer membrane {ECO:0000305|PubMed:18344283}; Single-pass type IV membrane protein {ECO:0000305}. | null | null | null | null | null | FUNCTION: Calcium-binding mitochondrial GTPase involved in calcium signaling during salt stress response (PubMed:16832621). May play a role in the progression of embryonic cell division, development of haploid male and female gametes, and pollen tube growth (PubMed:21494602). {ECO:0000269|PubMed:16832621, ECO:0000269|PubMed:21494602}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J117 | LSF1_ARATH | MAFLQQISGLGALERSCPSIMIGSSFRSGNGRVFDGRGIAYLGSREKFGFNRRRRVVLRVVAMSSSSTPFKMNLNEYMVTLEKPLGIRFALSADGKIFVHAIKKGSNAEKARIIMVGDTLKKASDSSGGTLVEIKDFGDTKKMLVEKTGSFSLVLERPFSPFPIQYLLHLSDLDLLYNRGRVSFVTWNKNLLSSNLRASSQGSGNSGYAAFSSKFFTPQGWKLLNRQSNSFQSGTKKNILSPPISPLVSVFSEDVPGDGEWGYGNFPLEEYIKALDRSKGELSYNHALGMRYSKITEQIYVGSCIQTEEDVENLSEAGITAILNFQGGTEAQNWGIDSQSINDACQKSEVLMINYPIKDADSFDLRKKLPLCVGLLLRLLKKNHRVFVTCTTGFDRSSACVIAYLHWMTDTSLHAAYSFVTGLHACKPDRPAIAWATWDLIAMVDDGKHDGTPTHSVTFVWNGHEGEEVLLVGDFTGNWKEPIKATHKGGPRFETEVRLTQGKYYYKYIINGDWRHSATSPTERDDRGNTNNIIVVGDVANVRPTIQQPRKDANIIKVIERVLTESERFRLAKAARCIAFSVCPIRLCPKS | 3.1.3.- | null | dephosphorylation [GO:0016311]; starch catabolic process [GO:0005983] | chloroplast [GO:0009507]; chloroplast starch grain [GO:0009569]; chloroplast stroma [GO:0009570]; starch grain [GO:0043036] | carbohydrate phosphatase activity [GO:0019203]; protein tyrosine/serine/threonine phosphatase activity [GO:0008138] | PF16561;PF00782; | 2.60.40.10;3.90.190.10; | null | null | SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000269|PubMed:20018601}. Note=Located on the surface of starch granules. | null | null | null | null | null | FUNCTION: Starch granule-associated phosphoglucan phosphatase involved in the control of starch accumulation. Participates in the regulation of the initial steps of starch degradation at the granule surface. May release a different set of phosphate groups from those removed by DSP4. {ECO:0000269|PubMed:20018601}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J220 | LPPE1_ARATH | MAASSSLLLLLHCPTCNFYFDSSSYLKRSRLSSYSSIISRGSPLFVSSFGSMTVKRFSSRVGSRSNDGNEQFGALEQESFINNSSEIRKDLVTGGGIEAIVNRLSKWVVSVLFGSIILLRHDGAALWAVIGSISNSALSVVLKRILNQERPTTTLRSDPGMPSSHAQSISFISVFAVLSVMEWLGTNGVSLFLSGLILALGSYFIRLRVSQKLHTSSQVVVGAIVGSLFCILWYTMWNSLLREAFEASLLVQISVFLFAATFALAFAAYVVLNWFKDER | 3.1.3.- | null | diacylglycerol biosynthetic process [GO:0006651]; protein N-linked glycosylation [GO:0006487] | chloroplast [GO:0009507]; chloroplast inner membrane [GO:0009706] | dolichyldiphosphatase activity [GO:0047874]; phosphatidate phosphatase activity [GO:0008195] | PF01569; | 1.20.144.10; | PA-phosphatase related phosphoesterase family | null | SUBCELLULAR LOCATION: Plastid, chloroplast inner membrane {ECO:0000305|PubMed:17652095}; Multi-pass membrane protein {ECO:0000305|PubMed:17652095}. | null | null | null | BIOPHYSICOCHEMICAL PROPERTIES: pH dependence: Optimum pH is 7.0. {ECO:0000269|PubMed:17652095}; | null | FUNCTION: Exhibits phosphatidate phosphatase (PAP) activity in vitro. May play a secondary role as PAP in plastids. {ECO:0000269|PubMed:17652095}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J264 | PRFB3_ARATH | MAAKIIGGCCSWRRFYRKRTSSRFLIFSVRASSSMDDMDTVYKQLGLFSLKKKIKDVVLKAEMFAPDALELEEEQWIKQEETMRYFDLWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSSLDVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNARVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLIISSTSNEECSATVDIIPLFLRASPDFEVKEGDLIVSYPAKEDHKIAENMVCIHHIPSGVTLQSSGERNRFANRIKALNRLKAKLLVIAKEQKVSDVNKIDSKNILEPREETRSYVSKGHKMVVDRKTGLEILDLKSVLDGNIGPLLGAHISMRRSIDAI | null | null | chloroplast organization [GO:0009658]; regulation of mRNA stability [GO:0043488] | chloroplast [GO:0009507]; chloroplast stroma [GO:0009570] | mRNA 3'-UTR binding [GO:0003730]; sequence-specific DNA binding [GO:0043565]; translation release factor activity [GO:0003747] | PF03462;PF00472; | 3.30.160.20;3.30.70.1660; | Prokaryotic/mitochondrial release factor family | null | SUBCELLULAR LOCATION: Plastid, chloroplast stroma {ECO:0000269|PubMed:21771930}. Plastid, chloroplast {ECO:0000269|PubMed:30962391}. | null | null | null | null | null | FUNCTION: Involved in the light- and stress-dependent regulation of stability of 3' processed petB transcripts, thus regulating cytochrome b6 accumulation, a rate-limiting step in photosynthetic electron transport. May be recruited to specifically protect petB transcripts against 3'-5' exonucleolytic attack by masking the 3' ends. Does not function as release factor. {ECO:0000269|PubMed:21771930}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J2K2 | FPGS2_ARATH | MLVCGKGFLKCRAPGVPFFCDKRKSFFTKTKRGFHSLPLGTGVRVYFNNNLRYSSNSIEVVEKAAINMGSKEDKADNPALSSYDDAMEALSTLISRRNRGDRTPTKGNRDKLEQVVTYLKILDLEDKIKELKVIHVAGTKGKGSTCVFSEAILRNCGFRTGMFTSPHLIDVRERFRIDGLDISEEKFLQYFWECWKLLKEKAVDGLTMPPLFQFLTVLAFKIFVCEKVDVAVIEVGLGGKLDSTNVIQKPVVCGIASLGMDHMDILGNTLADIAFHKAGIFKPQIPAFTVPQLSEAMDVLQKTANNLEVPLEVVAPLEPKKLDGVTLGLSGDHQLVNAGLAVSLSRCWLQRTGNWKKIFPNESKETEIPVAFCRGLATARLHGRAQVVHDVVSDPQDSSDSMETPCGDLIFYLDGAHSPESMEACGRWFSSAVRGDKSLSTAVNGYMRHGEYGTDLNRVSKQILLFNCMEVRDPQVLLPKLVTTCASSGTHFSRALFVPSMSTYNKVISGASAIPSDTRRKDLTWQFRLQRLWEKSIQGTDAGLDHTLKPDGITALPPHDFLCGDAPQCGGPAGTPVTSSAVMPSLPLTINWLRDCVRRNPSLKLEVLVTGSLHLVGDVLRLLKR | 6.3.2.17 | COFACTOR: Name=a monovalent cation; Xref=ChEBI:CHEBI:60242; Evidence={ECO:0000250|UniProtKB:Q05932}; Note=A monovalent cation. {ECO:0000250|UniProtKB:Q05932}; | one-carbon metabolic process [GO:0006730]; photorespiration [GO:0009853]; seedling development [GO:0090351] | cytosol [GO:0005829]; mitochondrial inner membrane [GO:0005743]; mitochondrial matrix [GO:0005759] | ATP binding [GO:0005524]; metal ion binding [GO:0046872]; tetrahydrofolylpolyglutamate synthase activity [GO:0004326] | null | 3.90.190.20;3.40.1190.10; | Folylpolyglutamate synthase family | null | SUBCELLULAR LOCATION: Mitochondrion inner membrane {ECO:0000250|UniProtKB:Q05932}. Mitochondrion matrix {ECO:0000269|PubMed:11752472}. | CATALYTIC ACTIVITY: Reaction=(6S)-5,6,7,8-tetrahydrofolyl-(gamma-L-Glu)(n) + ATP + L-glutamate = (6S)-5,6,7,8-tetrahydrofolyl-(gamma-L-Glu)(n+1) + ADP + H(+) + phosphate; Xref=Rhea:RHEA:10580, Rhea:RHEA-COMP:14738, Rhea:RHEA-COMP:14740, ChEBI:CHEBI:15378, ChEBI:CHEBI:29985, ChEBI:CHEBI:30616, ChEBI:CHEBI:43474, ChEBI:CHEBI:141005, ChEBI:CHEBI:456216; EC=6.3.2.17; Evidence={ECO:0000269|PubMed:11752472}; | null | PATHWAY: Cofactor biosynthesis; tetrahydrofolylpolyglutamate biosynthesis. {ECO:0000250|UniProtKB:Q05932}. | null | null | FUNCTION: Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis. Essential for organellar and whole-plant folate homeostasis. {ECO:0000250|UniProtKB:Q05932, ECO:0000269|PubMed:11752472, ECO:0000269|PubMed:21070407}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J2U9 | CFM3A_ARATH | MAMKPSLHFCPTTVTKKFVYSFQSSFCFRFLRYSSSISLGSCKGVTFSSRNDQIASRRFSFSRDCNNGVWLENWNRIQKRNQPKPPKVVVNYRKEGRFSGSEIVSGDDNRSRDGDGSTMEKIVEKLKKYGYMEEVQNKEIEQERRIEKGSVEDIFYVEEGKLPNTRGGFTEESLLGGENVIGSNGDVGFPWEKMSAKEKKELEAEWTAKKENRYSLAEMTLPESELRRLRNLTFRTASKMRIRGGGVTQVAVDAIKEKWKSAEIVRLKIEGASALNMRKMHEILEKKTGGLVIWRSGTSISLYRGVSYELPSGKWNKQRREETPPEAVIENHDETTTMVDKSDEKVHLPQLEQETTSVEKKDQTSPVVEYEDELDELLDDLGPRFMDWPGDNPLPVDADLLPGAIPDYEPPFRVLPYGVRSSLGPKEATALRRLARSIPPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKLTGGIMLSRNKDFLVFYRGKNFLSREVADALVEQERFVRTLQDEEEQARLRGSSALIVPSTEPANKLVSAGTLGETLDATGKWGKNLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVEVCLKPAEQREDPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIELQRREGLLKHISTMQAKAKQLRAEIEQMEKVTDKGDEELYNKLDMAYASSDEETDEEDDDDAFPETYAEGEDGEEGEILAGELSETEDKDLDSNESETGFGDDSVLFAEDLHTKSEDLPNKKVRLQHQS | null | null | Group II intron splicing [GO:0000373]; mRNA processing [GO:0006397]; seed development [GO:0048316] | chloroplast [GO:0009507]; mitochondrion [GO:0005739]; ribonucleoprotein complex [GO:1990904] | mRNA binding [GO:0003729] | PF01985; | 3.30.110.60; | null | null | SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000269|PubMed:18799595}. Mitochondrion {ECO:0000269|PubMed:18799595}. | null | null | null | null | null | FUNCTION: Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on subgroup IIB introns. The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3A and CAF1 or CAF2. Required for seed development. May influence the biogenesis of the mitochondrial small ribosomal subunit. {ECO:0000269|PubMed:18799595}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J339 | RPP1_ARATH | MGSVMSLGCSKRKATNQDVDSESRKRRKICSTNDAENCRFIQDESSWKHPWSLCANRVISVAAVALTNFRFQQDNQESNSSSLSLPSPATSVSRNWKHDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIVLLSRKYASSSWCLDELAEIMKCRQMVGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCRGKPKEQVERWRKALEDVATIAGYHSHSWRNEADMIEKISTDVSNMLNSFTPSRDFDGLVGMRAHMDMLEQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRPCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVEYPSNDEAFQIFCMNAFGQKQPHEGFDEIAWEVTCLAGELPLGLKVLGSALRGKSKREWERTLPRLKTSLDGKIGSIIQFSYDVLCDEDKYLFLYIACLFNGESTTKVKELLGKFLDVKQGLHLLAQKSLISFDGERIHMHTLLEQFGRETSRKQFVHHGFTKRQLLVGARGICEVLDDDTTDSRRFIGIHLELSNTEEELNISEKVLERVHDFHFVRIDASFQPERLQLALQDLIYHSPKIRSLNWYGYESLCLPSTFNPEFLVELDMRSSNLRKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLENCSSLEKLPAIENATKLRELKLQNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLPSSIGNLQNLCKLIMRGCSKLEALPININLKSLDTLNLTDCSQLKSFPEISTHISELRLKGTAIKEVPLSIMSWSPLADFQISYFESLMEFPHAFDIITKLHLSKDIQEVPPWVKRMSRLRDLSLNNCNNLVSLPQLSDSLDYIYADNCKSLERLDCCFNNPEIRLYFPKCFKLNQEARDLIMHTCIDAMFPGTQVPACFIHRATSGDSLKIKLKESPLPTTLRFKACIMLVKVNEELMSYDQTPMIVDIVIRDEHNDLKEKIYPSIYPSIYPLLTEHIYTFELDVEEVTSTELVFEFPQLNKRNWKIGECGILQRETRSLRRSSSPDLSPESSRVSSYDHCLRGD | 3.2.2.6 | null | defense response [GO:0006952]; defense response to fungus [GO:0050832]; innate immune response-activating signaling pathway [GO:0002758]; positive regulation of plant-type hypersensitive response [GO:0034052]; response to oomycetes [GO:0002239] | endoplasmic reticulum membrane [GO:0005789]; Golgi membrane [GO:0000139]; plasma membrane [GO:0005886] | ADP binding [GO:0043531]; ATP binding [GO:0005524]; innate immune receptor activity [GO:0140376]; LRR domain binding [GO:0030275]; NAD+ nucleosidase activity [GO:0003953]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809] | PF20160;PF07725;PF00931;PF01582; | 1.10.8.430;3.40.50.300;3.80.10.10;3.40.50.10140; | Disease resistance TIR-NB-LRR family | null | null | CATALYTIC ACTIVITY: Reaction=H2O + NAD(+) = ADP-D-ribose + H(+) + nicotinamide; Xref=Rhea:RHEA:16301, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:17154, ChEBI:CHEBI:57540, ChEBI:CHEBI:57967; EC=3.2.2.6; Evidence={ECO:0000305|PubMed:31439792, ECO:0000305|PubMed:31439793}; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:16302; Evidence={ECO:0000305|PubMed:31439792, ECO:0000305|PubMed:31439793}; | null | null | null | null | FUNCTION: TIR-NB-LRR receptor-like protein that confers resistance to the pathogen Hyaloperonospora arabidopsis (By similarity). Probably acts as a NAD(+) hydrolase (NADase): in response to activation, catalyzes cleavage of NAD(+) into ADP-D-ribose (ADPR) and nicotinamide; NAD(+) cleavage triggering a defense system that promotes cell death (PubMed:31439792, PubMed:31439793). {ECO:0000250|UniProtKB:F4JNA9, ECO:0000269|PubMed:31439792, ECO:0000269|PubMed:31439793}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J3N2 | FTSI5_ARATH | MDFISASSLSSPFSTQLSPIYLSSGIVSLKPRHRVKNRNFGSRESNNKSRKIVPIRGCFGFSGSFLRSKQSDYGSEAVSESLRLCGEGNELVLSSEYNSAKTRESVIQFVTKPLVYALFCIAIGLSPIRSFQAPALAVPFVSDVIWKKKKERVREKEVVLKAVDHEFSDYTRRLLETVSVLLKTIEIVRKENGEVAEVGAALDAVKVEKEKLQKEIMSGLYRDMRRLRKERDLLMKRADKIVDEALSLKKQSEKLLRKGAREKMEKLEESVDIMESEYNKIWERIDEIDDIILKKETTTLSFGVRELIFIERECVELVKSFNRELNQKSFESVPESSITKLSRSEIKQELVNAQRKHLEQMILPNVLELEEVDPFFDRDSVDFSLRIKKRLEESKKLQRDLQNRIRKRMKKFGEEKLFVQKTPEGEAVKGFPEAEVKWMFGEKEVVVPKAIQLHLRHGWKKWQEEAKADLKQKLLEDVDFGKQYIAQRQEQVLLDRDRVVSKTWYNEDKSRWEMDPMAVPYAVSRKLIDSARIRHDYAVMYVALKGDDKEFYVDIKEYEMLFEKFGGFDALYLKMLACGIPTSVHLMWIPMSELSLQQQFLLVTRVVSRVFNALRKTQVVSNAKDTVLEKIRNINDDIMMAVVFPVIEFIIPYQLRLRLGMAWPEEIEQTVGSTWYLQWQSEAEMNFKSRNTEDFQWFLWFLIRSSIYGFVLYHVFRFLKRKVPRLLGYGPFRRDPNVRKFWRVKSYFTYRKRRIKQKRKAGIDPIKTAFDRMKRVKNPPIPLKNFASIESMREEINEVVAFLQNPKAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSAANVRELFQTARDLAPVIIFVEDFDLFAGVRGKFVHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNHKQIDEALRRPGRMDRVFHLQSPTEMERERILHNAAEETMDRELVDLVDWRKVSEKTTLLRPIELKLVPMALESSAFRSKFLDTDELLSYVSWFATFSHIVPPWLRKTKVAKTMGKMLVNHLGLNLTKDDLENVVDLMEPYGQISNGIELLNPTVDWTRETKFPHAVWAAGRALITLLIPNFDVVENLWLEPSSWEGIGCTKITKVTSGGSAIGNTESRSYLEKKLVFCFGSHIASQMLLPPGDENFLSSSEITKAQEIATRMVLQYGWGPDDSPAVYYATNAVSALSMGNNHEYEMAGKVEKIYDLAYEKAKGMLLKNRRVLEKITEELLEFEILTHKDLERIVHENGGIREKEPFFLSGTNYNEALSRSFLDVGDPPETALLSAPT | null | null | cell redox homeostasis [GO:0045454]; chloroplast organization [GO:0009658]; protein import into chloroplast stroma [GO:0045037]; proteolysis [GO:0006508]; regulation of photorespiration [GO:0080093] | chloroplast [GO:0009507]; chloroplast envelope [GO:0009941]; chloroplast inner membrane [GO:0009706]; chloroplast thylakoid [GO:0009534]; cytosol [GO:0005829]; plasmodesma [GO:0009506]; Ycf2/FtsHi complex [GO:0062091] | ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent peptidase activity [GO:0004176]; chloroplast protein-transporting ATPase activity [GO:0016464]; metalloendopeptidase activity [GO:0004222] | PF00004;PF01434; | 3.40.50.300;1.20.58.760; | AAA ATPase family; Peptidase M41 family | null | SUBCELLULAR LOCATION: Plastid, chloroplast membrane {ECO:0000255}; Multi-pass membrane protein {ECO:0000255}. | null | null | null | null | null | FUNCTION: Required for plastid development during embryogenesis (PubMed:24964212). Might be involved in chaperone functions or play a structural role in the thylakoid FtsH complex (Probable). {ECO:0000269|PubMed:24964212, ECO:0000305}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J3R7 | SPD1_ARATH | MRALNSRLVLIDINSSWQASRRLISATATAFSSDSSSSFRRTRGARQRIASSKSPASSPSPVRRPSDGFSFDVRSPSSDSSISSRKSPTTAPPTVELDAFLEILPPATRKELVKHEAIEELIEVVMDLGRKPLARFPSGDWVISEQPVTHQDLELAVSKVGDFSDDNRSGIDRSLHRISAIRNRKLQVIGLTCRVGRVVSGSAEIIRDLIEGGGSILVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVPNVNLQHDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIKNPSLQILIGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVTVDAILAGKSAPFEIRQIRGEDDVPHKLVTPIPLENLEEEPAPLLNRDFVSELLSDDEDEDFLLIRSNKARSNTYTSPRSSPVHVYTYNVLEADLLQVAEVMGLDDEIEVTDDVGEADVILASSSELKQNSSIRRVAKLHKLPIFVIKSTTMAQMVKAVRMILGRESFGSAPKAIEKSSVDDIEIKDDAPESKPSLEELDALEEVRLAIEYIVIPGGEPVELLPRRSDIIVRQLELVESYQLAVENLGTHLNPRLQILPRRSTKKTLTSSSPQKSADGSMGTTGTRLPFLKD | null | null | plastid organization [GO:0009657]; reversible differentiation [GO:0090677]; seed maturation [GO:0010431] | chloroplast [GO:0009507]; chloroplast envelope [GO:0009941]; chloroplast intermembrane space [GO:0031972]; chloroplast membrane [GO:0031969] | ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887] | PF19568; | 3.40.50.300; | Ycf45 family | null | SUBCELLULAR LOCATION: Plastid, chloroplast membrane {ECO:0000269|PubMed:21045120}; Peripheral membrane protein {ECO:0000269|PubMed:21045120}; Intermembrane side {ECO:0000269|PubMed:21045120}. Plastid, chloroplast envelope {ECO:0000269|PubMed:21045120}. | null | null | null | null | null | FUNCTION: Required during eoplast (a highly reduced plastid type present during the degreening and dehydration stages of seed maturation) development in embryos and early stages of eoplast redifferentiation during seedling growth. {ECO:0000269|PubMed:21045120}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J3T8 | MYTM1_ARATH | MTPPRPPSGRVRSLRDYSSESEKMDGTGSWDTLEWTKLDSTSGSGSFSNLSCLLESERVIVEGYGVVLINTDEAGTLLVTNFRILFLSEGTRKVIPLGTIPLATIEKFNKMVLKVQSSPRQSDKIPPRRLLQVTGKDMRIIVYGFRPRTKQRRNVFDALLKCTKPERVWDLYTFACGPSKFGNANPKERLLNEYFRLLGKSSIRASMDMIEDGAFTLSNELWRISDLNSNYNLCQTYPFAFMIPKSISDAELLQACSFRARCRLPVITWCQPGSGAVIARSSQPLVGLMMNMRSNLDEKLVAAFCSQLPGAKGERRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRESFSRVRDYLDMHGTTSSDGRSSFLRHGGWTWGGGNLSSMSASVSLLGDSGWLIHIQSVLAGAAWIAARVAMESASVLVHCSDGWDRTTQLVSLACLLLDPYYRTFAGFQALVEKDWLAFGHPFSDRVGMPNISGSGNFDFPRQSSSAGSFPSSPVRQSSGSAASQSSSSSHGHNNYSPIFMQWIDSVSQLMRMYPCAFEFSPTFLVDFMDCLLSCRFGNFLCNSEKEREQCGIADACGCLWAYLTDLRSFSATSHVHCNPFYDPLKYDGPLLPPAASLAPTLWPQFHLRWACPEEAKAADIGVQCRAMTVKYSEMQKEKEAAERRVDEISFAMESLSAELLRERHLSWVARESANRATKEYAALTRAVQSLGCKINFTTSDVEDDPRSSLENNPRRRNRHGNNSDVSVSISLMPEENTSGNPKGRVCEALCPLRTREGVCRWPEVGCAHVGSQFVGLKANFDAFDRLAIYDSYFQPK | 3.1.3.64; 3.1.3.95 | null | cellular response to water deprivation [GO:0042631]; intracellular signal transduction [GO:0035556]; phosphatidylinositol dephosphorylation [GO:0046856]; regulation of response to water deprivation [GO:2000070] | cytoplasmic vesicle [GO:0031410]; endosome membrane [GO:0010008] | phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity [GO:0052629]; phosphatidylinositol-3-phosphate phosphatase activity [GO:0004438]; phosphoprotein phosphatase activity [GO:0004721] | PF06602; | 2.30.29.30; | Protein-tyrosine phosphatase family, Non-receptor class myotubularin subfamily | null | SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:22324391}. Endosome membrane {ECO:0000269|PubMed:22324391}; Peripheral membrane protein {ECO:0000269|PubMed:22324391}. Note=Present in granular particles of varying abundance and size at the cell periphery and throughout the cytoplasm. | CATALYTIC ACTIVITY: Reaction=a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-3-phosphate) + H2O = a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol) + phosphate; Xref=Rhea:RHEA:12316, ChEBI:CHEBI:15377, ChEBI:CHEBI:43474, ChEBI:CHEBI:57880, ChEBI:CHEBI:58088; EC=3.1.3.64; Evidence={ECO:0000269|PubMed:19901554, ECO:0000269|PubMed:20967218, ECO:0000269|PubMed:22324391}; CATALYTIC ACTIVITY: Reaction=a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-3,5-bisphosphate) + H2O = a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-5-phosphate) + phosphate; Xref=Rhea:RHEA:39019, ChEBI:CHEBI:15377, ChEBI:CHEBI:43474, ChEBI:CHEBI:57795, ChEBI:CHEBI:57923; EC=3.1.3.95; Evidence={ECO:0000269|PubMed:19901554, ECO:0000269|PubMed:22324391, ECO:0000305|PubMed:20967218}; | BIOPHYSICOCHEMICAL PROPERTIES: Kinetic parameters: KM=201.7 uM for PtdIns3P {ECO:0000269|PubMed:19901554, ECO:0000269|PubMed:22324391}; KM=146 uM for PtdIns3,5P(2) {ECO:0000269|PubMed:19901554, ECO:0000269|PubMed:22324391}; Vmax=94.3 pmol/min/mg enzyme with PtdIns3P as substrate {ECO:0000269|PubMed:19901554, ECO:0000269|PubMed:22324391}; Vmax=142.6 pmol/min/mg enzyme with PtdIns3,5P(2) as substrate {ECO:0000269|PubMed:19901554, ECO:0000269|PubMed:22324391}; | null | null | null | FUNCTION: Phosphatase with phosphoinositide 3'-phosphatase activity that can use phosphatidylinositol-3-phosphate (PtdIns3P) and phosphatidylinositol-3,5-diphosphate (PtdIns3,5P(2)) as substrates and produces phosphatidylinositol-5-phosphate (PtdIns5P); participates in pathway(s) that transfer gene regulatory signals to the nucleus. Required for recovery after water deprivation, via the accumulation of PtdIns5P upon dehydration; high PtdIns5P levels mediate ATX1 cytoplasmic localization, thus down-regulating the expression of ATX1-dependent genes. Confers sensitivity to soil-water-deficit stress. {ECO:0000269|PubMed:19901554, ECO:0000269|PubMed:20967218, ECO:0000269|PubMed:22324391}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J4C8 | EVN_ARATH | MKTTATSFVTGERVVVFVVVSRILLSLPLSLISHGFSLFLLSLSAFLVEIRVETSPFLLSHFSSRRGASSGILLGAVTLPSVMISKLVQLSRAISIHEAEQDELAHVTMQYWAASASCCAILIYLSVIMSQVRKDESLSSSSIWLTRVSLTGTVLYGVACFVSLSMISHTGLNTSLKMLWMLFHGLAAVKLIRHLLCTFPSCASIGEALLVTSGLVLYFGDFLACTIAKIFEKLIPVDLVSISYGIKRTETGIIVQGLLLGLLLFPMVFRFVLHIYESSLRKRDARQRNCSDAAKSVLFFVSLLFFMVVAVPSWMQFVHDFNQHPFLWVLTFVFSEPLKRLSLCIYWILLIVVSVSRFYNISRSSKVERILLRKYYHLMAVLMFLPALVLQPKFLDLAFGAALAVFVALEIIRIWRIQPLGEPLHQFMNAFTDHRDSEHLIVSHFSLLLGCALPIWMSSGFNDRALSPFAGILSLGIGDTMASMVGHKYGVLRWSKTGKKTVEGTAAGITSMMAVCFVLVPILASMGYILSQGWWSLLVAVTATGMLEAYTAQLDNAFIPLVFYSLLCL | 2.7.1.108 | null | dolichyl monophosphate biosynthetic process [GO:0043048]; phosphorylation [GO:0016310]; pollen development [GO:0009555]; pollen tube reception [GO:0010483]; protein glycosylation [GO:0006486] | endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789] | dolichol kinase activity [GO:0004168] | null | null | Polyprenol kinase family | null | SUBCELLULAR LOCATION: Endoplasmic reticulum membrane {ECO:0000269|PubMed:25919390}; Multi-pass membrane protein {ECO:0000255}. | CATALYTIC ACTIVITY: Reaction=CTP + di-trans,poly-cis-dolichol = a dolichyl phosphate + CDP + H(+); Xref=Rhea:RHEA:13133, Rhea:RHEA-COMP:9517, Rhea:RHEA-COMP:9521, ChEBI:CHEBI:15378, ChEBI:CHEBI:16091, ChEBI:CHEBI:37563, ChEBI:CHEBI:57683, ChEBI:CHEBI:58069; EC=2.7.1.108; | null | null | null | null | FUNCTION: Essential for pollen development. Involved in protein N-glycosylation in the endoplasmic reticulum (ER), especially in the female gametophyte. Mediates pollen tube (PT) reception in synergids through protein glycosylation. {ECO:0000269|PubMed:25919390}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J7T2 | EAF1B_ARATH | MHGSVSGYLLVNAEVDSMGGVIDSGGGIGVKTSPRRTAIEKAQAELRQEYDVREERRRELEFLEKGGNPLDFKFGIATSHSVQSTSLTDQQAEHFVNSEVKDSFALTASPHGDSVESSGRPGVPTISEPNTADNLLLFDSENKSVEGERNLRHPNRQNRTSESERSSKAHTNQNTKETEDSAIFRPYARRNRSKISRDPARSSSTDLVQNRGGLATSISIRRGSVEGKGCIPEAANQKDMHTTSVSCPVFANSNGNIVPKNRVSSNSLNTKVDGEPVVRESTAGSKTSLLKDEADISYSKSSAYLPVGESGLAGEKAQLVSTGGSPKAATIAGQKNSSTQLNGLRDSTVEEESLTNRGATGTNGLESESSHANNVEVNVDNERDLYKVDKLDSDEISMQKTLRVEGLLDQTVGEMTKTKIEDETGQSTTIISECIPECEMQMKSVKIENQSHRSTAEMQTKEKSSETEKRLQDGLVVLENDSKVGSILSENPSSTLCSGIPQASVDTSSCTVGNSLLSGTDIEALKHQPSSDAVMLDTVKEDAILEEARIIQAKKKRIAELSCGTAPVEVREKSQWDFVLEEMAWLANDFAQERLWKMTAATQICHRVALTCQLRFEERNQHRKLKKIASVLSYAILQFWSSVEAEVPGELEETSLGIVKETCQESNCLNGIRCLAAGVKEYASRFLKYNNSSISYHSAALSTPDNMCDPEILDISMVDQLTEASLFYSVPSGAMEVYLKSIESHLTRCEKSGSSMQEEVDTSAYDTAGDIGYNVTAFDEDEGETSTYYLPGAFESSRSFNISHKKRKNLMKSHSARSYDLGDDLPYVNNTGGSNSSSLIVKRPDSNINAGSVPTRRVRTASRHRVVSPFGCATTGNLPVPSKTDASSGDTSSFQDEYSSLHGGSAVQKGTEVESSVNFEKLLPYDMAETSGKPKKKKKTHQGSAYDQTWHLNPSVHVEQKDHWKKRPENNFDMNGLYGPHSAKKQKTTKQLVENNFDMAIPHTGSIPSPAASQMSNMSNPNKSIKFIGGRDRGRKIKGLKISPGQHGSGNPWSLFEDQALVVLVHDMGPNWELISDAMNSTLKIKYIYRNPTECKDRHKILMDKTAGDGADSAEDSGNSQSYPSTLPGIPKGSARQLFQRLQGPMEEDTLKSHFEKICLIGKKLHYRKTQNDGRDPKQIVPVHNSQVMALSQVFPNNLNGGVLTPLDVCDASTSGQDVFSLENPGLPMLNQGTPVLPTSGAHPSTPGSSGVVLSNNLPTTSGLQSASVRDGRFNVPRGSLPLDEQHRLQQFNQTLSGRNLQQPSLSTPAAVSGSDRGHRMVPGGNAMGVSGMNRNTPMSRPGFQGMASAAMPNTGNMHTSGMVGIPNTGNIHSGGGASQGNSMIRPREAVQHMMRMQAAQGNSPGIPAFSNLSSGFTNQTTPVQAYPGHLSQQHQMSPQSHVLGNSHHPHLQSPSQATGAQQEAFAIRQRQIHQRYLQQQQQQFPASGSMMPHVQQPQGSSVSSSSQNSPQTQPPVSPQPLSMPPVSPSPNINAMAQQKPQKSQLALHGLGRSPQSGTSGVNNQAGKQRQRQLQQSARQHPHQRQPTQGQQLNKQLKGMGRGNMIHQNITVDQSHLNGLTMPQGNQATEKGEIAVSVRPDQQSSVGTTTSTDLQSKPFVSPLSSNHSQQLPKSFPGALSPSPQQQMQLHSDNSIQGQSSPATPCNILSTSSLSIAPAVAPSNHQHLLIHQKQRNQVQSTAQRVVQHNHLGNSELSKKSQAECMPRVPQSVTNTTQTASMGTTKGMPQASNDLKNIKAVGSTAVPALEPPSCVASVQSTASKVVNNSNTDSAGNDPVSTPNQGLAQKHGIKGVTQRQQQSLPSEEKRPKLPEKPTVQNQKHLASEEQPHLEEAQELSSSKPPDTKVE | null | null | chromatin organization [GO:0006325]; regulation of flower development [GO:0009909]; regulation of photoperiodism, flowering [GO:2000028]; regulation of timing of transition from vegetative to reproductive phase [GO:0048510] | apoplast [GO:0048046]; NuA4 histone acetyltransferase complex [GO:0035267]; nucleus [GO:0005634] | DNA binding [GO:0003677] | PF07529;PF13921; | 1.10.10.60; | EAF1 family | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000269|Ref.3}. | null | null | null | null | null | FUNCTION: Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. {ECO:0000269|Ref.3}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J8C6 | VIP1L_ARATH | MEMEEGASGVGEKIKIGVCVMEKKVFSAPMGEILDRLQSFGEFEILHFGDKVILEDPIESWPICDCLIAFHSSGYPLEKAQAYAALRKPFLVNELDPQYLLHDRRKVYEHLEMYGIPVPRYACVNRKVPNQDLHYFVEEEDFVEVHGERFWKPFVEKPVNGDDHSIMIYYPSSAGGGMKELFRKIGNRSSEFHPDVRRVRREGSYIYEEFMATGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNTDGKEVRYPVLLTPAEKQMAREVCIAFRQAVCGFDLLRSEGCSYVCDVNGWSFVKNSYKYYDDAACVLRKMCLDAKAPHLSSTLPPTLPWKVNEPVQSNEGLTRQGSGIIGTFGQSEELRCVIAVVRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGKPRAETKLKSAVQLQDLLDATRMLVPRTRPGRESDSDAEDLEHAEKLRQVKAVLEEGGHFSGIYRKVQLKPLKWVKIPKSDGDGEEERPVEALMVLKYGGVLTHAGRKQAEELGRYFRNNMYPGEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEAAKARLNEIVTSGTKMIDDDQVSSEDFPWMTDGAGLPPNAHELLRELVKLTKNVTEQVRLLAMDEDENLTEPYDIIPPYDQAKALGKTNIDSDRIASGLPCGSEGFLLMFARWIKLARDLYNERKDRFDITQIPDVYDSCKYDLLHNSHLDLKGLDELFKVAQLLADGVIPNEYGINPQQKLKIGSKIARRLMGKILIDLRNTREEALSVAELKESQEQVLSLSASQREDRNSQPKLFINSDELRRPGTGDKDEDDDKETKYRLDPKYANVKTPERHVRTRLYFTSESHIHSLMNVLRYCNLDESLLGEESLICQNALERLCKTKELDYMSYIVLRLFENTEVSLEDPKRFRIELTFSRGADLSPLRNNDDEAETLLREHTLPIMGPERLQEVGSCLSLETMEKMVRPFAMPAEDFPPASTPVGFSGYFSKSAAVLERLVNLFHNYKNSSSNGRS | 2.7.4.24 | null | defense response to fungus [GO:0050832]; inositol metabolic process [GO:0006020]; inositol phosphate biosynthetic process [GO:0032958]; jasmonic acid and ethylene-dependent systemic resistance [GO:0009861]; phosphorylation [GO:0016310]; positive regulation of antifungal innate immune response [GO:1905036]; positive regulation of defense response to insect [GO:1900367]; positive regulation of vitamin E biosynthetic process [GO:1904966] | cytosol [GO:0005829]; plasma membrane [GO:0005886] | ATP binding [GO:0005524]; diphosphoinositol-pentakisphosphate kinase activity [GO:0033857]; inositol heptakisphosphate kinase activity [GO:0000829]; inositol hexakisphosphate 1-kinase activity [GO:0052723]; inositol hexakisphosphate 3-kinase activity [GO:0052724]; inositol hexakisphosphate 5-kinase activity [GO:0000832]; inositol hexakisphosphate kinase activity [GO:0000828]; inositol-1,3,4,5,6-pentakisphosphate kinase activity [GO:0000827] | PF00328;PF18086; | 3.40.50.11950;3.30.470.20;3.40.50.1240; | Histidine acid phosphatase family, VIP1 subfamily | null | SUBCELLULAR LOCATION: Cytoplasm, cytosol {ECO:0000250|UniProtKB:O43314}. | CATALYTIC ACTIVITY: Reaction=1D-myo-inositol hexakisphosphate + ATP = 1-diphospho-1D-myo-inositol 2,3,4,5,6-pentakisphosphate + ADP; Xref=Rhea:RHEA:37459, ChEBI:CHEBI:30616, ChEBI:CHEBI:58130, ChEBI:CHEBI:74946, ChEBI:CHEBI:456216; EC=2.7.4.24; Evidence={ECO:0000269|PubMed:25231822}; CATALYTIC ACTIVITY: Reaction=5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate + ATP + H(+) = 1,5-bis(diphospho)-1D-myo-inositol 2,3,4,6-tetrakisphosphate + ADP; Xref=Rhea:RHEA:10276, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:58628, ChEBI:CHEBI:77983, ChEBI:CHEBI:456216; EC=2.7.4.24; Evidence={ECO:0000269|PubMed:25231822}; | null | null | null | null | FUNCTION: Bifunctional inositol kinase that acts in concert with the IP6K kinases to synthesize the diphosphate group-containing inositol pyrophosphates diphosphoinositol pentakisphosphate, PP-InsP5, and bis-diphosphoinositol tetrakisphosphate, (PP)2-InsP4. PP-InsP5 and (PP)2-InsP4, also respectively called InsP7 and InsP8, may regulate a variety of cellular processes, including apoptosis, vesicle trafficking, cytoskeletal dynamics, and exocytosis. Phosphorylates inositol hexakisphosphate (InsP6) at position 1 to produce PP-InsP5 which is in turn phosphorylated by IP6Ks to produce (PP)2-InsP4. Alternatively, phosphorylates PP-InsP5 at position 1, produced by IP6Ks from InsP6, to produce (PP)2-InsP4 (PubMed:25231822). Probably involved in vitamin E homeostasis via the regulation of gamma-tocopherol biosynthesis (PubMed:17077148). Catalyzes the conversion of InsP7 to InsP8. Regulates jasmonic acid (JA) perception and plant defenses against herbivorous insects (e.g. P.rapae) and necrotrophic fungi (e.g. M.brassicae, B.cinerea and A.brassicicola) by triggering the production of jasmonate-induced pools of InsP8 and subsequent activation of SCF(COI1) E3 ubiquitin ligase complexes with JAZ proteins (e.g. TIFY10A/JAZ1) (PubMed:25901085). {ECO:0000269|PubMed:17077148, ECO:0000269|PubMed:25231822, ECO:0000269|PubMed:25901085}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J8D3 | TPLAT_ARATH | MDILFAQIQADLRSNDALRQSSALLQALQQSAAGRDISVIAKSAVEEIVASPASAVCKKLAFDLIRSTRLTPDLWDTVCSGVKTDLHFPDPDVTAAAVSILAALPAFSLPKLISDCSSEIASCFDSPSDNLRFSITETLGCILARDDLVTLCENNVGLLDKVSNWWARIGQNMLDKSDAVSKVAFESVGRLFQEFDSKRMSRLAGDKLVDSENSLAIRSKWVSSMVDIVWRKRSALMARSLVLPVETFRATVFPLVFAVKAVASGSVEVIRQLSKASSAAAAANATVVDSNAEKLVGVSDLVTHLAPFLASSLDPALIFEVGINMLYLADVAGGKPEWASQSIIAILTLWDRQEFSSARESIVRAVVTNLHLLDLHMQVSLFRRLLLMVRNLRAESDRMHALACICRTALCVHLFARESARRGQKPLPGTDIISLFEDARIKDDLNSVTSKSLFREELVAMLVESCFQLSLPLPEQKNSGMESRVIGALAYGTGYGALNWTEPALEVVEVCRPCVKWDCDGRTYAVDCYLKLLVRLCHIYDTRGGVKRLKDGASQDQILNETRLQNLQRELVKDLQEVNTPRILGRLIWTIAEHIDLEGLDPLLADDPDDPLNIIIANIHKVLFNLDAAATTSNRLQDVQAVLLCAQRMGSRHARAGQLLTKELEEYRNHAAADTVSKHQTRLILQRIKYVSNLPERKWAGVSETRGDYPFSHHKLTVQFYEPSAAQDRKLEGLIHKAILELWRPKPTELTLFLTKGVDSTSIKVPPTAYPLTGSSDPCYIEAYHLADTNDGRVTLHLKIINLTELELNRVDIRVGLSGALYFMDGSPQAVRQLRNLVSQDPVQCSVTVGVSQFERCGFWVQVLYYPFRGARGEYDGDYIEEDPQIMKQKRGSKAELGEPVILRCQPYKIPLTELLLPHKISPVEFFRLWPSLPAVAEYTGTYMYEGSGFMATAAQQYGASPFLSGLKSLSSKPFHRVCSHIIRTVAGFQLCYAAKTWHGGFVGMMIFGASEVSRNMDLGDETTTMMCKFVVRASEASITKQIESDIQGWCDDLTDGGVEYMPEDEVKATAAEKLKISMERIALLKAAQPKKTSKIEEESENEEEEEGEEEDDDEEVKEKKEKEEGKDKEEKKKKEKEKGTFSKLTAEETEHMALQAAVLQEWHILCKDRKYTKVN | null | null | cytokinesis by cell plate formation [GO:0000911]; endocytosis [GO:0006897]; pollen development [GO:0009555] | cell plate [GO:0009504]; cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; cytosol [GO:0005829]; nucleus [GO:0005634]; phragmoplast [GO:0009524]; plasma membrane [GO:0005886]; plasmodesma [GO:0009506] | identical protein binding [GO:0042802] | null | 1.25.10.10; | TPLATE family | null | SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton, phragmoplast {ECO:0000269|PubMed:15469496, ECO:0000269|PubMed:17189342, ECO:0000269|PubMed:21187379}. Note=Localized in the forming cell plate and the cortical division zone (CDZ) during cytokinesis. | null | null | null | null | null | FUNCTION: Functions in vesicle-trafficking events required for site-specific cell wall modifications during pollen germination and for anchoring of the cell plate to the mother wall at the correct cortical position. {ECO:0000269|PubMed:17189342}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J8G7 | VIR_ARATH | MVRSEPCVLFAQTFVHPQLDEYVDEVIFAEPVIITACEFLEQNASSSSQAVSLVGATSPPSFALEVFVRCEGESKFKRLCNPFLYTPSAPYPLEVEAVVTNHLVVRGSYRSLSLIVYGNIVKDLGQYNIILEGRSVTDIVSSTEGNLEDLPLVLHSVNRTIEECLSSLDIVSLPLAAVDLPVEVKRLLQLLLKIFDKLATNDVVNKFVDTVVSGVSSYVTDNVDFFLKNKNCSAVTSSLDSGLFHDIVDRVKEDILDLNEIQESDVALGLFSFLESETYLATSQQLVVMLSPYIQFERDSLCTVLPKLSKGKATLLGLSLAFLLCSGREGCLQFVNSGGMDQLVYLFGHDGQNSTTITLLLLGVVEQATRHSVGCEGFLGWWPREDGSIPSGKSEGYCLLLKLLMQKPCHEIASLAIYILRRLRIYEVISRYEFAVLSALEGLSNSHGAATHNLNMLSDAKSQLQKLQNLMKSLGSVEDPSPSAYAERSLVSDHSEGWLSYKATSKLTSSWTCPFYSSGIDSHILALLKERGFLPLSAALLSMPELHSKVGDIMDVFTDIAMFIGNIILSFMFSRTGLSFLLHHPELTATIIQSLKGSVDLNKEECVPLHYASILISKGFTCSLLEIGINLEMHLRVVSAVDRLLKSIQQTEEFLWILWELRDVSRSDCGREALLTLGVFPEALAVLIEALHSAKDMEPAVENSGISPLNLAICHSAAEIFEVIVSDSTASCLHAWIEHAPVLHKALHTLSPGGSNRKDAPSRLLKWIDAGVVYHKHGVGGLLRYAAVLASGGDAQLSSSSILALDLTPAENGAGESTNVSEMNVLDNLGKVIFEKSFEGVNLSDSSISQLTTALRILALISDNSTVAAALYDEGAVTVVYAILVNCSFMFERSSNIYDYLVDDDHGCSSISDFLSERNREQSLVDLLIPSLVLLISVLQRLQGTKEQYRNTKLMKALLRLHREVSPKLAACAADLSSHYPDSALGFGAVCHLIVSALVCWPVYGWIPGLFHTLLSGVQTSSVPALGPKETCSFLCILSDILPEEGVWFWKSGMPLLSGLRKLAVGTLMGPQKEKQINWYLEPGPLEKLINHLTPNLDKIAKIIQHHAVSALVVIQDMLRVFIVRIACQRVEHASILLRPIFSSIRDGILDQSSTRDTEAYMVYRYLNFLASLLEHPHAKGLLLEEGIVQLLVEVLERCYDATYPSENRVLEYGIVSASSVIQWCIPAFRSISLLCDSQVPLLCFQKKELLASLSAKDCALIFPFVLKFCQVLPVGNELLSCLGAFKDLSSCGEGQDGLVSLLFHLFSGTEESVSERWCDTNSLSLDQLDMKKNPPFLSCWIKLLNSINSKDGLSSLAMKAVNVLSVGSIRLCLDGKSLDSKKVAALKSLFGLPSEFSGTDTFREENIGLIEQMVTLLSSMTSGSDSSATAEMKPYLHEASQSLLSLLKDGNIDDIISCKGVFVSPGNLDMDDLVSRNIEDDLYQRGLEDKFWWECPETLPERLPQSSLPAKRKLPTLESSSRRAKGENSSVDIPTQNSIQRGMGSVSLPPAPTRRDAFRQRKPNTSRPPSMHVDDYVARERSVDTAGNSNAITISRAGSSSGRPPSIHVDEFMARQRERGQNPSTIVVGEAVVQVKNPTPARDTEKVAGKPKQFKADPDDDLQGIDIVFDGEECEGPDDKLPFLQPDENLMQPAPVMVEQNSPHSIVEETESDANGSSQFSHMGTPVASNVDENAQSEFSSRISVSRPEMSLIREPSISSDRKFVEQADEAKKMAPLKSAGISESGFIPAYHMPGSSGQNSIDPRVGPQGFYSKSGQQHTGHIHGGFSGRGVYEQKVMPNQPPLPLVPPPSVSPVIPHSSDSLSNQSSPFISHGTQSSGGPTRLMPPLPSAIPQYSSNPYASLPPRTSTVQSFGYNHAGVGTTEQQQSGPTIDHQSGNLSVTGMTSYPPPNLMPSHNFSRPSSLPVPFYGNPSHQGGDKPQTMLLVPSIPQSLNTQSIPQLPSMQLSQLQRPMQPPQHVRPPIQISQPSEQGVSMQNPFQIPMHQMQLMQQTQVQPYYHPPQQQEISQVQQQQQHHAVQGQQGAGTSQQQESGMSLHDYFKSPEAIQALLSDRDKLCQLLEQHPKLMQMLQEKLGQL | null | null | embryo development ending in seed dormancy [GO:0009793]; mRNA methylation [GO:0080009]; mRNA processing [GO:0006397]; response to salt stress [GO:0009651]; RNA splicing [GO:0008380] | nuclear speck [GO:0016607]; nucleoplasm [GO:0005654]; RNA N6-methyladenosine methyltransferase complex [GO:0036396] | mRNA methyltransferase activity [GO:0008174]; RNA binding [GO:0003723] | PF15912; | null | Vir family | null | SUBCELLULAR LOCATION: Nucleus speckle {ECO:0000269|PubMed:28503769}. Nucleus, nucleoplasm {ECO:0000269|PubMed:28503769}. | null | null | null | null | null | FUNCTION: Subunit of the N6-methyltransferase complex, a multiprotein complex that mediates N6-methyladenosine (m6A) methylation at the 5'-[AG]GAC-3' consensus sites of some mRNAs (PubMed:28503769). Associates with MTA, MTB, FIP37 and HAKAI to form the m6A writer complex which is essential for adenosine methylation at specific mRNA sequences (PubMed:28503769). N6-methyladenosine (m6A) plays a role in mRNA stability, processing, translation efficiency and editing (PubMed:28503769). {ECO:0000269|PubMed:28503769}. | Arabidopsis thaliana (Mouse-ear cress) |
F4J9M5 | CHR12_ARATH | MVAQQLQERCGGTSQEDPVETTKSLICALNYISRDLPLPPHLFTAVSSIYHGASSSSLSDSDVSPPLPTSPPANKAPYGADLMGEFEDALLKQRPDCESGSRLIQLLDNRNKSHIQRRLSELEELPSTRGEDLQAKCLLELYGLKLRELQGKVRTAVSSEFWLRLNCADVSSQVFDWGMMRLPRPFYGVGDPFAMEADDQFRKKRDAERLSRLEEEEKNLIETAKRKFFAEVLNAVREFQLQIQATQKRRRQRNDGVQAWHGRQRQRATRAEKLRLMALKSDDQEAYMKLVKESKNERLTTLLEETNKLLANLGAAVQRQKDAKLPEGIDLLKDSESDLSELDAPRSEPLQDLLPDQDIDITESDNNDDSNDLLEGQRQYNSAIHSIQEKVTEQPSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVPGPYLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIREKIAGEGKFNVLITHYDLIMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSVQNFEEWFNAPFADRGNVSLTDEEELLIIHRLHHVIRPFILRRKKDEVEKFLPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTGSGKSKSLQNLTMQLRKCCNHPYLFVGGDYNMWKKPEIVRASGKFELLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEEIMRKGTSSLGTDVPSEREINRLAARSEDEFWMFERMDEERRRKENYRARLMQEQEVPEWAYTTQTQEEKLNNGKFHFGSVTGKRKRKEIVYSDTLSELQWLKAVESGEDLSKLSMRYNRREENASNTKTSTSKKVIESIQTVSDGTSEEDEEEQEEERAKEMSGKQRVDKSEEEEEEGEEENDGKAIFKWNTHKKKRSRYSFTCSSSDSRAQSSNGSRRK | 3.6.4.12 | null | maintenance of root meristem identity [GO:0010078]; maintenance of seed dormancy [GO:0010231]; maintenance of shoot apical meristem identity [GO:0010492]; positive regulation of transcription by RNA polymerase II [GO:0045944]; response to heat [GO:0009408]; response to salt stress [GO:0009651]; response to water deprivation [GO:0009414] | nucleus [GO:0005634] | ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent chromatin remodeler activity [GO:0140658]; DNA binding [GO:0003677]; helicase activity [GO:0004386]; histone binding [GO:0042393] | PF00271;PF14619;PF00176; | 3.40.50.300;3.40.50.10810; | Helicase family | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. | CATALYTIC ACTIVITY: Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.12; | null | null | null | null | FUNCTION: Probable chromatin-remodeling factor that is functionally redundant with CHR23 in root and shoot stem cell initiation, and root apical meristem (RAM) and shoot apical meristem (SAM) maintenance. Plays an important role in mediating the temporary plant growth arrest induced upon perception of stress (PubMed:17605754, PubMed:23062007). May promote seed maturation and repress initiation of germination (PubMed:24839909). {ECO:0000269|PubMed:17605754, ECO:0000269|PubMed:23062007, ECO:0000269|PubMed:24839909}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JAA5 | SKI2_ARATH | MNKVEAGNELGFRVGFSGHGGHLRVEPFYTAERDDALNSLPDFVSPPAFAKETKESIKKHIEEKYLIPRLEPDQFSAEKAENQWDFDWFSRVKMPLQPSLPRSVVVPTWELPFRRQKEDTENGAWEPKSVEVDLSEQMYGDQDSGFFPRMVGPPKDFLRGSVNNRPFRPGGLEDSQSSERVLPEGVSSGQWVQELLNGGPAQTVPPSFKQSLDLGDLMPYPQTWSVYEDHSSHGNASDENSSKLSIQFDDLFKKAWEEDTFSELEGDDHTAGSESPKAEAEPDAKASISNEVSKGLETDVTVLDEILSSAKTAIMSEEAVTGSSDKQLRKEGWATKGDSQDIADRFYELVPDMAIEFPFELDNFQKEAICCLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSIRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHINFVLLSATVPNTFEFADWIGRTKQKEIRVTGTTKRPVPLEHCLFYSGELYKVCENEVFLSKGIKDAKDSQKKKNSNAVSVAPKQQMGSSAHQDGSKSQKHEAHSRGKQNKHSSVKDVGKSSYSGNSQNNGAFRRSAASNWLLLINKLSKMSLLPVVVFCFSKNYCDRCADALTGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQVLRLQSLLHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCRDEVPDESDLRRVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKQQLLMIKRSLPTKHIECIKGEPAIEDYYDMYMEANEYNNKMSEAVMQSPYAQSFLVQGRVVVMKSGMGIDNLLGIVLKGPSNTNRQYVVLVIKSEIPPPEKNMVSIGKKSSDPSQGYFIAPKSKRGFEEEFYTKPSSRKGPVVIKIELPYHGVAAGVGYEVKGFDNKEFLCICDSKIKIDQVRLLEDGNKAAFSQTVQQLLDLKSDGNKFPPALDPVKDLKLKDAELVETYYKWTNLLQKMSMNKCHGCVKLEEHMKLAREIKKHKTDLKDLEFQMSDEALLQMPAFQGRIDVLKNIGCIDDDLVVQIKGRVACEMNSGEELICTVCLFENQFEELEPEEAVAIMSAFVFQQKNTSAPTLTPKLAKAKQRLYDTAIRLGELQAQYNLQIDPEEYAQENLKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRLDETCREFKNAAAIMGNSALHKKMDAASNAIKRDIVFAASLYVTGV | 3.6.4.13 | null | nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay [GO:0070478]; positive regulation of wax biosynthetic process [GO:1904278]; post-transcriptional gene silencing [GO:0016441]; potassium ion transport [GO:0006813]; response to potassium ion [GO:0035864]; RNA fragment catabolic process [GO:0000292] | cytoplasm [GO:0005737]; plant-type vacuole [GO:0000325]; Ski complex [GO:0055087] | ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724] | PF00270;PF08148;PF00271;PF21408;PF13234;PF17911; | 1.10.3380.30;3.40.50.300; | DExH box helicase family, SKI2 subfamily | null | SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:22511887}. | CATALYTIC ACTIVITY: Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13; Evidence={ECO:0000305}; | null | null | null | null | FUNCTION: Component of the SKI complex which is thought to be involved in exosome-mediated RNA decay and associates with transcriptionally active genes in a manner dependent on PAF1 complex (PAF1C) (PubMed:22511887). Involved in the regulation of potassium deprivation stress response (PubMed:21535471). {ECO:0000269|PubMed:21535471, ECO:0000269|PubMed:22511887}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JAU3 | P4H2_ARATH | MSMSRLGLLLFVAILLVLLQSSTCLISSPSSIINPSKVKQVSSKPRAFVYEGFLTDLECDHLISLAKENLQRSAVADNDNGESQVSDVRTSSGTFISKGKDPIVSGIEDKLSTWTFLPKENGEDLQVLRYEHGQKYDAHFDYFHDKVNIARGGHRIATVLLYLSNVTKGGETVFPDAQEFSRRSLSENKDDLSDCAKKGIAVKPKKGNALLFFNLQQDAIPDPFSLHGGCPVIEGEKWSATKWIHVDSFDKILTHDGNCTDVNESCERWAVLGECGKNPEYMVGTPEIPGNCRRSCKAC | 1.14.11.2 | COFACTOR: Name=Fe(2+); Xref=ChEBI:CHEBI:29033; Evidence={ECO:0000255|PROSITE-ProRule:PRU00805}; Note=Binds 1 Fe(2+) ion per subunit. {ECO:0000255|PROSITE-ProRule:PRU00805}; COFACTOR: Name=L-ascorbate; Xref=ChEBI:CHEBI:38290; Evidence={ECO:0000250|UniProtKB:Q86KR9}; | peptidyl-proline hydroxylation to 4-hydroxy-L-proline [GO:0018401]; root hair cell development [GO:0080147] | endoplasmic reticulum membrane [GO:0005789]; endosome [GO:0005768]; Golgi apparatus [GO:0005794]; Golgi cis cisterna [GO:0000137]; Golgi membrane [GO:0000139]; trans-Golgi network [GO:0005802] | iron ion binding [GO:0005506]; L-ascorbic acid binding [GO:0031418]; procollagen-proline 4-dioxygenase activity [GO:0004656] | PF13640; | 2.60.120.620; | P4HA family | null | SUBCELLULAR LOCATION: Endoplasmic reticulum membrane {ECO:0000305|PubMed:21680836}; Single-pass type II membrane protein {ECO:0000305|PubMed:21680836}. Golgi apparatus membrane {ECO:0000305|PubMed:21680836}; Single-pass type II membrane protein {ECO:0000305|PubMed:21680836}. Note=Predominantly localized in the endoplasmic reticulum. {ECO:0000269|PubMed:21680836}. | CATALYTIC ACTIVITY: Reaction=2-oxoglutarate + L-prolyl-[collagen] + O2 = CO2 + succinate + trans-4-hydroxy-L-prolyl-[collagen]; Xref=Rhea:RHEA:18945, Rhea:RHEA-COMP:11676, Rhea:RHEA-COMP:11680, ChEBI:CHEBI:15379, ChEBI:CHEBI:16526, ChEBI:CHEBI:16810, ChEBI:CHEBI:30031, ChEBI:CHEBI:50342, ChEBI:CHEBI:61965; EC=1.14.11.2; Evidence={ECO:0000269|PubMed:15528200}; | BIOPHYSICOCHEMICAL PROPERTIES: Kinetic parameters: KM=170 uM for 2-oxoglutarate {ECO:0000269|PubMed:15528200}; KM=30 uM for poly(L-proline) polypeptides of 5-10 kDa {ECO:0000269|PubMed:15528200}; KM=1260 uM for (Ala-Thr-Pro-Pro-Pro-Val)3 peptide present in arabinogalactan protein {ECO:0000269|PubMed:15528200}; KM=660 uM for Ser-Pro-Pro-Pro-Pro-Val-Ser-Pro-Pro-Pro-Val-Ser-Pro-Pro-Pro-Pro-Val peptide present in extensin protein {ECO:0000269|PubMed:15528200}; KM=380 uM for Ser-Pro-Pro-Pro-Val-Tyr-Lys-Ser-Pro-Pro-Pro-Pro-Val-Lys-His-Tyr-Ser-Pro-Pro-Pro-Val peptide present in extensin protein {ECO:0000269|PubMed:15528200}; KM=2800 uM for (Pro-Pro-Gly)10 {ECO:0000269|PubMed:15528200}; | null | null | null | FUNCTION: Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in proline-rich peptide sequences of plant glycoproteins and other proteins. Hydroxyprolines are important constituent of many plant cell wall glycoproteins such as extensins, hydroxyproline-rich glycoproteins, lectins and arabinogalactan proteins. Possesses high affinity for leucine-rich repeat and proline-rich extensins of root cell walls that are essential for root hair development. Hydroxyprolines define the subsequent O-glycosylation sites by arabinosyltransferases which elongate the O-arabinosides on extensins. Has low affinity for the substrates tested in vitro. {ECO:0000269|PubMed:15528200, ECO:0000269|PubMed:21680836}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JBX1 | RGF10_ARATH | MDMLRSACFYFLLIVFVILSWSLLCDSRHLGHMEKKLSVNLDLLNKDNEEITKLEAPSTNKTNTLLSQSHAVVNHGDNGQINGKKTKEIHRVKRASDKKVSSKRVSRTWKIPKYPKKQPKSDQEHPGFNLDYMQPTTHPPHHN | null | null | cell differentiation [GO:0030154]; lateral root development [GO:0048527]; regulation of root development [GO:2000280]; regulation of root morphogenesis [GO:2000067]; response to auxin [GO:0009733] | extracellular region [GO:0005576]; nucleus [GO:0005634] | growth factor activity [GO:0008083] | null | null | RGF family | PTM: The tyrosine sulfation is critical for the function of the peptide. {ECO:0000250|UniProtKB:Q3E880}. | SUBCELLULAR LOCATION: [CLELn]: Secreted {ECO:0000250|UniProtKB:Q3E880}. Nucleus {ECO:0000255|PROSITE-ProRule:PRU00768, ECO:0000269|PubMed:22815541}. | null | null | null | null | null | FUNCTION: [CLELn]: Maintains the postembryonic root stem cell niche by regulating the expression levels and patterns of the transcription factor PLETHORA (PLT), mainly at the post-transcriptional level (By similarity). Promotes root elongation (PubMed:22815541). {ECO:0000250|UniProtKB:Q3E880, ECO:0000269|PubMed:22815541}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JCB2 | CPL5_ARATH | MFVAKNLSPERESKRQKKEPEIMEPSFPLLSPNNCGHWYIRYGFCIVCKSTVDKTIEGRVFDGLHLSSEALALTKRLITKFSCLNMKKLHLVLDLDLTLIHSVRVPCLSEAEKYLIEEAGSTTREDLWKMKVRGDPISITIEHLVKLRPFLCEFLKEANEMFTMYVYTKGTRPYAEAILKLIDPKKLYFGHRVITRNESPHTKTLDMVLADERGVVIVDDTRKAWPNNKSNLVLIGRYNYFRSQSRVLKPHSEEKTDESENNGGLANVLKLLKGIHHKFFKVEEEVESQDVRLTMSVVENFSSEPKAKRRKIEPTINESSSSLSSSSSCGHWYICHGICIGCKSTVKKSQGRAFDYIFDGLQLSHEAVALTKCFTTKLSCLNEKKLHLVLDLDHTLLHTVMVPSLSQAEKYLIEEAGSATRDDLWKIKAVGDPMEFLTKLRPFLRDFLKEANEFFTMYVYTKGSRVYAKQVLELIDPKKLYFGDRVITKTESPHMKTLDFVLAEERGVVIVDDTRNVWPDHKSNLVDISKYSYFRLKGQDSMPYSEEKTDESESEGGLANVLKLLKEVHQRFFRVEEELESKDVRSLLQEIDFELNVESVE | 3.1.3.16 | null | abscisic acid-activated signaling pathway [GO:0009738]; response to abscisic acid [GO:0009737]; response to cold [GO:0009409]; response to salt [GO:1902074]; response to water deprivation [GO:0009414] | nucleus [GO:0005634] | myosin phosphatase activity [GO:0017018]; RNA polymerase II CTD heptapeptide repeat phosphatase activity [GO:0008420] | PF03031; | 3.40.50.1000; | null | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:21231936}. | CATALYTIC ACTIVITY: Reaction=H2O + O-phospho-L-seryl-[protein] = L-seryl-[protein] + phosphate; Xref=Rhea:RHEA:20629, Rhea:RHEA-COMP:9863, Rhea:RHEA-COMP:11604, ChEBI:CHEBI:15377, ChEBI:CHEBI:29999, ChEBI:CHEBI:43474, ChEBI:CHEBI:83421; EC=3.1.3.16; Evidence={ECO:0000269|PubMed:21231936}; CATALYTIC ACTIVITY: Reaction=H2O + O-phospho-L-threonyl-[protein] = L-threonyl-[protein] + phosphate; Xref=Rhea:RHEA:47004, Rhea:RHEA-COMP:11060, Rhea:RHEA-COMP:11605, ChEBI:CHEBI:15377, ChEBI:CHEBI:30013, ChEBI:CHEBI:43474, ChEBI:CHEBI:61977; EC=3.1.3.16; Evidence={ECO:0000269|PubMed:21231936}; | null | null | null | null | FUNCTION: Mediates the dephosphorylation of 'Ser-2' of the heptad repeats YSPTSPS in the C-terminal domain of the largest RNA polymerase II subunit (RPB1). This promotes the activity of RNA polymerase II. Positively regulates abscisic acid (ABA) and drought responses, including the regulation of specific genes expression. {ECO:0000269|PubMed:21231936}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JCC1 | PR40B_ARATH | MANNHQYPGIQPFQHPNASSIDLPRGFAPPMNFQFLPTIQAPQSEQVARLSSQNFQCVGRGGTVLSIGYPPQSYAPQLLQSMHHSHERPSQLNQVQVQHVPLGPPTLISQPNVSIASGTSLHQPYVQTPDIGMPGFGGPRALFSYPSATSYEGSRVPPQVTGPSIHSQAQQRASIIHTSAESSIMNPTFEQPKAAFLKPLPSQKALTDWVEHTSADGRKYFFNKRTKKSTWEKPVELMTLFERADARTDWKEHSSPDGRKYYYNKITKQSTWTMPEEMKIVREQAEIASVQGPHAEGIIDASEVLTRSDTASTAAPTGLPSQTSTSEGVEKLTLTSDLKQPASVPGSSSPVENVDRVQMSADETSQLCDTSETDGLSVPVTETSAATLVEKDEISVGNSGDSDDMSTKNANQGSGSGPKESQKPMVESEKVESQTEEKQIHQESFSFNNKLEAVDVFKSLLKSAKVGSDWTWEQAMREIINDKRYGALRTLGERKQAFNEFLLQTKRAAEEERLARQKKLYEDFKRMLEECVELTPSTRWSKTVTMFEDDERFKALEREKDRRNIFEDHVSELKEKGRVKALEDRKRNIIEYKRFLESCNFIKPNSQWRKVQDRLEVDERCSRLEKIDQLEIFQEYLRDLEREEEEKKKIQKEELKKVERKHRDEFHGLLDEHIATGELTAKTIWRDYLMKVKDLPVYSAIASNSSGATPKDLFEDAVEDLKKRDHELKSQIKDVLKLRKVNLSAGSTFDEFKVSISEDIGFPLIPDVRLKLVFDDLLERAKEKEEKEARKQTRQTEKLVDMLRSFKDITASSSWEELKHLVEGSEKCSTIGDESFRKRCFEDYVSLLKEQSNRIKQNKKVPEDVREEHDKGRDKYGREKDRVRERDSDDHHKKGAAGKYNHDMNEPHGKERRRSGRDSHNRHRERHTSVKENDTDHFKESHKAGGGHKKSRHQRGWVSEAEVEGKEKRRRKEEAREHTKEEELEDGECGRY | null | null | mRNA cis splicing, via spliceosome [GO:0045292]; RNA splicing [GO:0008380] | nucleus [GO:0005634]; U1 snRNP [GO:0005685]; U2-type prespliceosome [GO:0071004] | RNA binding [GO:0003723]; RNA polymerase binding [GO:0070063] | PF01846;PF00397; | 2.20.70.10;1.10.10.440; | PRPF40 family | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:19467629}. | null | null | null | null | null | FUNCTION: Binds the phosphorylated C-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries (PubMed:10907853). May be involved in pre-mRNA splicing (Probable). {ECO:0000269|PubMed:10907853, ECO:0000305|PubMed:19467629}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JCN9 | PRE4_ARATH | MSSRKSRSRQTGASMITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNLSKEVDDLSERLSQLLESTDSAQAALIRSLLMQ | null | null | gibberellic acid mediated signaling pathway [GO:0009740]; photomorphogenesis [GO:0009640]; regulation of growth [GO:0040008]; regulation of timing of transition from vegetative to reproductive phase [GO:0048510] | nucleus [GO:0005634] | DNA-binding transcription factor activity [GO:0003700]; protein dimerization activity [GO:0046983] | PF00010; | 4.10.280.10; | BHLH protein family | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00981}. | null | null | null | null | null | FUNCTION: Atypical and probable non DNA-binding bHLH transcription factor that integrates multiple signaling pathways to regulate cell elongation and plant development. Regulates light responses by binding and inhibiting the activity of the bHLH transcription factor HFR1, a critical regulator of light signaling and shade avoidance. May have a regulatory role in various aspects of gibberellin-dependent growth and development. {ECO:0000269|PubMed:16527868, ECO:0000269|PubMed:20305124}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JCU0 | SUA_ARATH | MDPSRYGRQQEWDNNSAPEGYGTQHDPNHRFGVSYDDGYPDERLMRDDVYNYPPGHNTLGDLPQSRKRNYEENYPSELRRQEKPYIDSNYAADYYHDSEAGSRNGHYRDHEHERSSRYDGCDDYSCNDNNYRSKNYHHSRDDGREKDYDYTRRSYDSEYERASVRDGSRKSRDPQDRERNSRDREWDSRDREWDKRCYSRERDESPHKRYEKSRSRSTGRGEFSRSRSPRGRSHGRSYREDSYEGDHWNESERRREYEDRHNQDHFSATPSATVVVKGLSMKSTEEDLYQILAEWGPLHHVRVIREQNSGISRGFAFIDFPTVDAARTMMDRIEHDGIVLDGRKLMFHYSQPTGRAGVSRRQEHASRRSYGGSRNMIVPTDWICTICGCINFARRTSCFQCNEPKTKDSPSADVGLSNSAAGKRISETGPTHVLVVRGLDEDADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNRTALERNGKILRVAYAKSVHGSGTGISAPSHSNNLAAAAIEAATFSQQYDGVGWAPKEYNTGEKQNTGGQAQGVGEIESQKGTSAPQSGYVWDEASGYYYDAASGYYYDGNSGLYYDSNSGLWYSYDQQTQQYVPCPDQNNESKVTENQPDSAKKEKSSQQKVIISAATTPNVEKVLSLPDAVQAAAAAAIASEKREKERVKEIKLASKTSLLASKKKMSNVLTMWKQRSHETQIQRPSPSLGDNPPTVSAEARSSFSTGQSMGKLKSDVIIAKERSTSNHGVSALTTAESSSSSTTGGTLMGVMRGSFGGTLGGASSSASVQMPPILPSASPASVSVSGSGRRRFSETPTAGPTHREQPQTSYRDRAAERRNLYGSSTSSGNDVIDSSEDLMGLRKGSSDPTPFPPGVGGRGITTSTEVSSFDVITEERAIDESNVGNRMLRNMGWHEGSGLGKDGSGMKEPVQAQGVDRRAGLGSQQKKVDAEFEVQPGDTYRTLLHKKALARFRDMSDNN | null | null | mRNA processing [GO:0006397]; mRNA splicing, via spliceosome [GO:0000398]; regulation of RNA splicing [GO:0043484] | nucleus [GO:0005634]; spliceosomal complex [GO:0005681] | metal ion binding [GO:0046872]; RNA binding [GO:0003723] | PF01585;PF17780;PF00076; | 3.30.70.330;4.10.1060.10; | null | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:20525852}. | null | null | null | null | null | FUNCTION: Splicing factor that controls alternative splicing of the developmental regulator ABI3. Reduces splicing of a cryptic intron in ABI3, leading to a decreased in ABI3-beta transcript (PubMed:20525852). Regulates the splicing of the receptor-like kinase SNC4/LRKL-2.6 (PubMed:25267732). {ECO:0000269|PubMed:20525852, ECO:0000269|PubMed:25267732}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JCX9 | LNK2_ARATH | MFDWEEEELTNMIWGDDAETGDHIVPFKVRSEQLNKKEQIEESKTAEQKITGTKIDLHDKNLGSSSSHNVDEGLPQPDFCMSSWPDTSLTNATKVDQDLSATELSKCLAEPVRYDSTRGGAFLLKQSCFTWVRSFQSNHFKSCVLTLFLPEKTSELGKGPDIFHSSDESKEQGDFDDYSWANIGSFDDLDRMFSDGFAAMMSLYLVMAVSAVVMSYGHLLKITEFEQQENQQFPLTGKANGLSSQSVPSVRVTLKADQYREHKGQPSVEDQPYQQNKMMKFSKMPGTSEARPFQELYGQRIPFSNSAGKCVNQLAPPQSSLMAVNLLSESEGSGTSHYSHMPNQYMANSAFGNLANPYSSVPVISAVQHPDVRNQLMHPSYNPATATSVNMATDASARPSTMTPQEKLEKLRRRQQMQAMLAIQRQQQQFSHQVPVADQSITQNCLQDIPLQLVDKTNLQGLTAMPSFDPSSSLEQDDSGKFAAAVDNSAEFAVLYRLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQDDQEVIPREESRYRYAGMPDTEAVTNPTDRTVAHLLFHRPFDMLAAKRMEGPESPASSKMGTEEKGNFPKCSIRETHLTKQKAQKEEGPADSLALGNAPNSGSSSTVGERVVEASQGNKRKL | null | null | circadian regulation of gene expression [GO:0032922]; entrainment of circadian clock [GO:0009649]; regulation of DNA-templated transcription [GO:0006355] | nucleus [GO:0005634] | transcription coregulator activity [GO:0003712] | null | null | null | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:25012192}. | null | null | null | null | null | FUNCTION: Transcriptional coactivator necessary for expression of the clock genes PRR5 and TOC1 (PubMed:25012192, PubMed:25848708). Antagonizes REV8 function in the regulation of anthocyanin accumulation (PubMed:25848001). Involved in red light input to the clock (PubMed:25012192). Activates clock-controlled genes with afternoon peak (PubMed:23818596). Mediates light inhibition of hypocotyl elongation (PubMed:23818596). Unable to bind to DNA, but recruited to the evening element (EE)-containing region of the PRR5 and TOC1 promoters through its interaction with the DNA binding proteins REV8 and REV4 (PubMed:25012192, PubMed:25848708). {ECO:0000269|PubMed:23818596, ECO:0000269|PubMed:25012192, ECO:0000269|PubMed:25848001, ECO:0000269|PubMed:25848708}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JEI8 | NAP1D_ARATH | MSNEENIKSDNKSGDSSDLPTIPALDIGAEECDLLAELKNLTLKRPFDVKKLSPKVTKRVLFLKDIQVTHDELEEKFLAEKSALEATYDNLYKPLFAKRYEIVNGVVEAEAEKEGVPNFWLIAMKTNEMLANEITERDEAALKYLKDIRSCRVEDTSRNFKLEFLFDSNLYFKNSVLSKTYHVNDEDGPVLEKVIGTDIEWFPGKCLTHKVVVKKKTKKGPKKVNNIPMTKTENCESFFNFFKPPEIPEIDEVDDYDDFDTIMTEELQNLMDQDYDIAVTIRDKLIPHAVSWFTGEALVDEDDSDDNDDDDNDEKSD | null | null | double-strand break repair via homologous recombination [GO:0000724]; nucleosome assembly [GO:0006334]; somatic cell DNA recombination [GO:0016444] | chromatin [GO:0000785]; cytoplasm [GO:0005737]; nucleus [GO:0005634] | chromatin binding [GO:0003682]; histone binding [GO:0042393] | PF00956; | 1.20.5.1500;3.30.1120.90; | Nucleosome assembly protein (NAP) family | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:19228338}. Cytoplasm {ECO:0000269|PubMed:19228338}. Note=Shuttles between cytoplasm and nucleus. | null | null | null | null | null | FUNCTION: May modulate chromatin structure by regulation of nucleosome assembly/disassembly. {ECO:0000250}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JEP5 | MSH5_ARATH | MEEMEDTETEPQVYMACIQHGRRVGVSYYDCSVRQLHVLEFWEEDCSDFTLINMVKYQAKPSIIYASTKSEESFVAALQQNDGTDETTMVKLVKSSTFSYEQAWHRLVYLRVTGMDDGLNIKERICYLSSMMDVGSEVQVRVSGGLLAILESERIVETLEQNESGSASIAIDSVMEVPLNKFLKLDAAAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCATPMGRRLLRSWFMRPILDLEVLDRRLNAISFFISSVELMASLRETLKSVKDISHLLKKFNSPTSLCTSNDWTAFLKSISALLHVNKIFEVGVSESLREHMRRFNLDIIEKAGLCISTELDYVYELVIGVIDVTRSKERGYQTLVKEGFCAELDELRQIYEELPEFLQEVSAMELEHFPHLHKEKLPPCIVYIQQIGYLMCIFGEKLDETALNRLTEFEFAFSDMDGETQRFFYHTSKTRELDNLLGDIYHKILDMERAIIRDLLSHTLLFSAHLLKAVNFVAELDCILSLACVAHQNNYVRPVLTVESLLDIRNGRHVLQEMAVDTFIPNDTEINDNGRIHIITGPNYSGKSIYVKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKFMTAEQSTFMIDLHQVGMMLRQATSRSLCLLDEFGKGTLTEDGIGLLGGTISHFATCAEPPRVVVCTHLTELLNESCLPVSEKIKFYTMSVLRPDTESANMEEIVFLYRLIPGQTLLSYGLHCALLAGVPEEVVKRAAIVLDAFESNNNVDKLSLDKISSQDQAFKDAVDKFAELDISKGDIHAFFQDIFTS | null | null | chiasma assembly [GO:0051026]; homologous chromosome segregation [GO:0045143]; meiotic mismatch repair involved in reciprocal meiotic recombination [GO:0010777]; reciprocal meiotic recombination [GO:0007131]; resolution of meiotic recombination intermediates [GO:0000712] | condensed nuclear chromosome [GO:0000794]; cytosol [GO:0005829]; germ cell nucleus [GO:0043073] | ATP binding [GO:0005524]; ATP-dependent DNA damage sensor activity [GO:0140664]; mismatched DNA binding [GO:0030983] | PF05192;PF00488; | 1.10.1420.10;3.40.50.300; | DNA mismatch repair MutS family | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:18318687}. Chromosome {ECO:0000269|PubMed:18318687}. Note=In pollen mother cells during meiosis, localizes to unsynapsed axes during leptotene and zygotene, but is not present on synapsed regions of zygotene nuclei. {ECO:0000269|PubMed:18318687}. | null | null | null | null | null | FUNCTION: Involved in meiotic recombination in association with MSH4. Required for reciprocal recombination and proper segregation of homologous chromosomes at meiosis. Promotes homologous recombination through facilitating chiasma formation during prophase I. Involved in the control of class I crossovers formation. {ECO:0000269|PubMed:18318687, ECO:0000269|PubMed:18379590, ECO:0000269|PubMed:18812090, ECO:0000269|PubMed:21771883}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JF14 | ENOL1_ARATH | MKSRSLKLREAHKVGGSAAFCSILWDHKAEHFVTSSSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLWDVDKKQDIDRHKFEERICCMSWKPNGNALSVIDAKGRYGVWESLVPSSMLSPTVGVPDIVPKKRNEILDFDDEVEEEIYRASESLDDAMGDSDDGESHHTSRKRLRKKTLIDEDVDDAYEELNDGSSLPSASEYRKKSHRGHREKQGARSGAFKGISASTKYKMQSSFQPGATPPEPGKRTFLCYNMLGCITTIEHEGNSRIETDFHDTGRGPRVSSMIDIYGFTMASINETGCVFANPCKGEKNMSVLMYRPFRSWASNSEWTMRFEGEEVKVVANGSGWVAAVTSLNLLRVFSEGGLQKHILSLDGPVVTAVGCKDHLAVVTHVSDCLPSNEQVMEFRVFNISKMTQELKGRVALTPGSRLTWIGFSEEGSLSSYDSEGVLRVFTSQYGGSWIPVFSTSKEKKQEENYWVVGLNTSSLYCIACKYAEMFPQVTPKPILTILDLSLPLASSDLGAASLENELILKQLRLYETQRKVDDMALVGVDTTALEDEAFDLEVSQDKCILRLISSCCSSDSFARASELMELLTLEKSMRAAITLVTKLKLPFLAEKFSSILEERLLEEASEAAVTNPALNPNGEVVTRVESKVQNPPASIQTSENTEAVMKSSATKLSAPTLLKKSKVSEGLKLGKEQTKKDKSDDAKIKEIKKLNLKNPVNNVNKEDKGQEKEVNQGEARRSSNPFLKSTV | null | null | DNA repair [GO:0006281]; DNA-templated DNA replication [GO:0006261]; mitotic cell cycle [GO:0000278]; response to auxin [GO:0009733] | nuclear replication fork [GO:0043596]; nucleus [GO:0005634] | chromatin binding [GO:0003682] | PF12894;PF20946;PF12341;PF00400; | 2.130.10.10; | null | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00768, ECO:0000269|PubMed:28428341}. | null | null | null | null | null | FUNCTION: Participates in maintaining the H3K27me3 mark at target genes by interacting with LHP1-PRC2 complexes during replication, thus contributing to H3K27me3 inheritance. {ECO:0000269|PubMed:28428341}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JFU8 | OBL1_ARATH | MHKDNDSGSGSNPGQVSNYLIVRPHRGGYIDLFRYGVRDDQTSKAKFLEMPDNREWSTITIDEEAEDHRWVIVVSILVRKIIRLLRTPMEFTGFVVDFFLNLFSANGGFFGLLLRLIQAKVVIPERGSVTFVSTIGQLDGRISLYKEWNFVEHLEGIDSVDSGRVKIELGSRGLMDLCVMASKLAYENAKVVENVVDLHWKMNLVEFLDCWNDYQKQMSTQVFVFTDKQKDANLIVISFRGTEPFDADDWGTDFDYSWYEVPNVGKLHMGFLEAMGLGNRDDTTTFHYNLFEQTSSEEENSKKNLLDMVERSAYYAVRVILKRLLSEHENARFVVTGHSLGGALAILFPTLLVLNEETEIMKRLLGVYTFGQPRIGNREVGLFMKAQLNQPVDRYFRVVYCNDIVPRLPYDDKTFLYKHFGLCLFYDSFYNETKAEDEPDPNPYGLRYKILGHVIAVWELVRGLTMGYTHGPDYKEGWFRILFRLMGLVIPGLSDHCMTDYVNSVRLGPDNELQMSSL | 3.1.1.- | null | lipid catabolic process [GO:0016042] | lipid droplet [GO:0005811]; membrane [GO:0016020]; pollen tube [GO:0090406] | acylglycerol lipase activity [GO:0047372]; hormone-sensitive lipase activity [GO:0033878]; triglyceride lipase activity [GO:0004806] | PF01764; | 3.40.50.1820; | AB hydrolase superfamily, Lipase family | null | SUBCELLULAR LOCATION: Lipid droplet {ECO:0000269|PubMed:29178188}. Membrane {ECO:0000255}; Single-pass membrane protein {ECO:0000255}. Note=Associates with the oil body membrane. {ECO:0000305|PubMed:29178188}. | CATALYTIC ACTIVITY: Reaction=(9Z)-octadecenoate + 1,2-di-(9Z-octadecenoyl)-glycerol + H(+) = 1,2,3-tri-(9Z-octadecenoyl)-glycerol + H2O; Xref=Rhea:RHEA:38379, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30823, ChEBI:CHEBI:52323, ChEBI:CHEBI:53753; Evidence={ECO:0000269|PubMed:29178188}; PhysiologicalDirection=right-to-left; Xref=Rhea:RHEA:38381; Evidence={ECO:0000269|PubMed:29178188}; CATALYTIC ACTIVITY: Reaction=1-(9Z-octadecenoyl)-glycerol + H2O = (9Z)-octadecenoate + glycerol + H(+); Xref=Rhea:RHEA:38487, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:17754, ChEBI:CHEBI:30823, ChEBI:CHEBI:75342; Evidence={ECO:0000269|PubMed:29178188}; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:38488; Evidence={ECO:0000269|PubMed:29178188}; | null | null | BIOPHYSICOCHEMICAL PROPERTIES: pH dependence: Optimum pH is 5.5. {ECO:0000269|PubMed:29178188}; | null | FUNCTION: Acid lipase that can hydrolyze a range of triacylglycerols without a clear preference for acyl-chains (PubMed:29178188). Can also cleave 1,2-diacylglycerol, 1,3-diacylglycerol and 1-monoacylglycerol, but not phosphatidylcholine, phosphatidylethanolamine, or sterol esters (PubMed:29178188). Required for pollen tube growth (PubMed:29178188). Triacylglycerol hydrolysis by OBL1 may provide acyl groups for the synthesis of membrane lipids in growing pollen tubes (Probable). {ECO:0000269|PubMed:29178188, ECO:0000305|PubMed:29178188}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JGP4 | KN14D_ARATH | MPLRNQNRAPLPSPNVKKEALSSIPFDKRRKETQGTGRRQVLSTVNRQDANSDVGSTEECGKVEFTKDEVLALLNERAKAGKFDTKGKIEQMTDIIKKLKVCVRWYQQVDETHVQDKENLSSSLQSAEKRYSDKELDAKTKEEELRATITEMKENIESLQEKLSKEKLSKLDAIENHRREKDCRVVAEKLQVSLREELDKVKEEKMAAKQKVTSLEDMYKRLQEYNTSLQQYNTKLQTDLEVAREAHTRAEKEKSSILENLTTLRGHSKSLQDQLASSRVSQDEAVKQKDSLLMEVNNLQSELQQVRDDRDRHVVQSQKLAGEILMYKESVGKSSHELDILIAKSGSLEETCSLQKERIKMLEQELAFAKEKLKMVDLSMSHTMTEFEEQKQCMHELQDRLADTERQLFEGELLRKKLHNTILELKGNIRVFCRVRPLLPDDGGRQEASVIAYPTSTESLGRGIDVVQSGNKHPFTFDKVFDHGASQEEVFFEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPETPEQKGLIPRSLEQIFKTSQSLSTQGWKYKMQVSMLEIYNESIRDLLSTSRTIAIESVRADSSTSGRQYTITHDVNGNTHVSDLTIVDVCSIGQISSLLQQAAQSRSVGKTHMNEQSSRSHFVFTLRISGVNESTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSALSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAARVNACEIGIPRRQTSAKLLDSRLSYG | null | null | cell division [GO:0051301]; microtubule cytoskeleton organization [GO:0000226]; microtubule-based movement [GO:0007018]; spindle assembly [GO:0051225] | nucleus [GO:0005634]; phragmoplast [GO:0009524]; spindle microtubule [GO:0005876] | ATP binding [GO:0005524]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777] | PF00225; | 3.40.850.10; | TRAFAC class myosin-kinesin ATPase superfamily, Kinesin family, KIN-14 subfamily | null | SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton. Cytoplasm, cytoskeleton, phragmoplast. Note=In interphase, is enriched specifically at growing microtubule plus-ends. In dividing cells, accumulates in spindle midzones and phragmoplast leading edges. | null | null | null | null | null | FUNCTION: Kinesin that supports microtubule movement in an ATP-dependent manner and that functions as a minus-end directed motor as well as a plus-end tracking protein. During mitosis, is involved in early spindle assembly. Participates in the capture of antiparallel interpolar microtubules and helps in generating force to coalign microtubules. {ECO:0000269|PubMed:15659646, ECO:0000269|PubMed:17220198, ECO:0000269|PubMed:18088313}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JGR5 | PFPB2_ARATH | MASQLDLIGGDYIAGISINPPTNSRVTSVYSEVQASRIDHTLPLPSVFKTPFKIIDGPPSSSAGHPEEIEKLFPNLFGQPSALLVPNQSNEVSSDQKLKIGVVLSGGQAPGGHNVICGIFDYLQEYARGSSLFGFRGGPAGIMKGKYIELTSEFVYPYRNQGGFDMICSGRDKIETPEQFKQAEETVTKMDLDGLVVIGGDDSNTNACLLAEHFRAKNMKTLVIGCPKTIDGDLKSKEVPTSFGFDTACKIYSEMIGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVFEKKLTLKNVTDNIVDVIYKRAENGYNYGVILVPEGLIDFIPEVQQLISELNEVLAEGNVDEEGQWKKNLKKETLEIFEFLPQTIQEQLMLERDPHGNVQVAKIETEKMLIQMVETELEKKKTEGTYEREFMGKSHFFGYEGRCGLPTNFDATYCYALGYGAGSLLQSGKTGLISSVGNLAAPVEEWTVGGTALTSLMDVERRHGKFKPVIKKAMVELEGAPFKKFASQREEWALKNRYISPGPIQFKGPGSDARNHTLMLELGAQA | 2.7.1.90 | COFACTOR: Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000255|HAMAP-Rule:MF_03185}; | embryo development ending in seed dormancy [GO:0009793]; fructose 6-phosphate metabolic process [GO:0006002]; photosynthesis [GO:0015979]; response to glucose [GO:0009749] | cytosol [GO:0005829] | 6-phosphofructokinase activity [GO:0003872]; ATP binding [GO:0005524]; diphosphate-fructose-6-phosphate 1-phosphotransferase activity [GO:0047334]; metal ion binding [GO:0046872] | PF00365; | 3.40.50.450;3.40.50.460; | Phosphofructokinase type A (PFKA) family, PPi-dependent PFK group II subfamily, Clade 'Long' sub-subfamily | null | SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_03185}. | CATALYTIC ACTIVITY: Reaction=beta-D-fructose 6-phosphate + diphosphate = beta-D-fructose 1,6-bisphosphate + H(+) + phosphate; Xref=Rhea:RHEA:13613, ChEBI:CHEBI:15378, ChEBI:CHEBI:32966, ChEBI:CHEBI:33019, ChEBI:CHEBI:43474, ChEBI:CHEBI:57634; EC=2.7.1.90; Evidence={ECO:0000255|HAMAP-Rule:MF_03185}; | null | PATHWAY: Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 3/4. {ECO:0000255|HAMAP-Rule:MF_03185}. | null | null | FUNCTION: Catalytic subunit of pyrophosphate--fructose 6-phosphate 1-phosphotransferase. Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. {ECO:0000255|HAMAP-Rule:MF_03185}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JGZ1 | MED16_ARATH | MNQQNPEEEVSLVNNSGGGGIIEAPAIVEEKEEEGLQQKQEETIESTDPILVVVEEKLLEKSVDGEKEDDNSSSSNMEIDPVSPATVFCVKLKQPNSNLLHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSKANTPFWIPIHILIPERPTECAVFNVVADSPRDSVQFIEWSPTSCPRALLIANFHGRITIWTQPTQGSANLVHDATSWQCEHEWRQDIAVVTKWLTGASPYRWLSSKPSSGTNAKSTFEEKFLSQSSESSARWPNFLCVCSVFSSGSVQIHWSQWPSNQGSTAPKWFSTKKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGLQATPKISTGSRVPPSLSSSSWTGFAPLAAYLFSWQEYLISEIKQGKKPSDQDSSDAISLSCSPVSNFSAYVSPEAAAQSAATTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESSVQPVVLHQIFGNPTSNFGGQVPTQTVWVSRVDMSIPPTKDFKNHQVAAAGPSVDAPKEPDSGDEKANKVVFDPFDLPSDIRTLARIVYSAHGGEIAIAFLRGGVHIFSGPTFSPVENYQINVGSAIAAPAFSPTSCCSASVWHDAAKDCAMLKIIRVLPPALPRNQSKVDQSTWERAIAERFWWSLLVGVDWWDAVGCTQSAAEDGIVSLNSVIAVMDADFHSLPSTQHRQQYGPNLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALVNPSALVFEPWRVDGETITGINPEAMAVDPALVSSIQAYVDAVLDLASHFITRLRRYASFCRTLASHAASAGTGSNRNNVTSPTQNASSPATPQVFPDKSLYLAVGQPTTTTTTTATTNSSGSSHVQAWMQGAIAKISSSNDGSNSTASPISGSPTFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFLQRSSRFPQRNADVSSQKLQTGATSKLEEVNSAKPTPALNRIEDAQGFRGAQLGTGVKGIDENSARTTKMGSGNAGQGYTYEEVRVLFHILMDLCKRTSGLAHPLPGSQVGSGNIQVRLHYIDGNYTVLPEVVEAALGPHMQNMPRPRGADAAGLLLRELELHPPSEEWHRRNLFGGPGSEPEDMILTDDVSKLSNSLDLPDTNFSGICDGYNRVHSLWPRKRRMSERDAAFGSNTSVGLGAYLGIMGSRRDVVTATWKTGLEGVWYKCIRCLRQTSAFASPGATKQPNPNERETWWTSRWVYCCPMCGGTWVRVV | null | null | abscisic acid-activated signaling pathway [GO:0009738]; auxin-activated signaling pathway [GO:0009734]; circadian regulation of gene expression [GO:0032922]; positive regulation of plant-type cell wall cellulose biosynthetic process [GO:2001011]; positive regulation of systemic acquired resistance [GO:1901672]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell wall pectin metabolic process [GO:1902066]; regulation of DNA-templated transcription [GO:0006355]; regulation of ethylene-activated signaling pathway [GO:0010104]; regulation of jasmonic acid mediated signaling pathway [GO:2000022]; regulation of long-day photoperiodism, flowering [GO:0048586]; regulation of plant-type cell wall cellulose biosynthetic process [GO:2001009]; response to osmotic stress [GO:0006970]; root development [GO:0048364]; trichome branching [GO:0010091]; trichome papilla formation [GO:1905499] | mediator complex [GO:0016592]; nucleus [GO:0005634] | transcription coregulator activity [GO:0003712] | null | null | Plant Mediator complex subunit 16 family | null | SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:19067974}. | null | null | null | null | null | FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the regulation of the circadian clock, in the control of flowering time, in freezing- and osmotic-stress tolerance and in both salicylic acid- and jasmonate-mediated defense gene expression. {ECO:0000269|PubMed:12753580, ECO:0000269|PubMed:18614706, ECO:0000269|PubMed:19067974, ECO:0000269|PubMed:22494141}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JHA2 | RSH1C_ARATH | MTSASSMSVSVECVNICNLTKGDGNARSDCSALSCAWKAPRALTGFLASTAHPPVCSVYSCGRNGRKSRMKACAWQRYEYEVGFSEAPYFVNVRNILKSRLSCGGHKRWELYCVSAESSSGASSDVTVETLWEDLFPSISYLPRKELEFVQKGLKLAFEAHHGQKRRSGEPFIIHPVAVARILGELELDWESIVAGLLHDTVEDTNFITFEKIEEEFGATVRHIVEGETKVSKLGKLKCKTESETIQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGETLQVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILVKKIEDDQFLDLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQQLRIVVKPKPSVGVGPLCSPQQICYHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRTEEMDLIAERGIAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGWLNAIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGNKMVAAKVNGNLVSPTHVLENAEVVEIVTYNALSSKSAFQRHKQWLQHAKTRSARHKIMRFLREQAAQCAAEITQDQVNDFVADSDSDVEDLTEDSRKSLQWWEKILVNVKQFQSQDKSRDTTPAPQNGSVWAPKVNGKHNKAIKNSSSDEPEFLLPGDGIARILPANIPAYKEVLPGLDSWRDSKIATWHHLEGQSIEWLCVVSMDRKGIIAEVTTVLAAEGIALCSCVAEIDRGRGLAVMLFQIEANIESLVSVCAKVDLVLGVLGWSSGCSWPRSTENAQVLEC | 2.7.6.5 | null | guanosine tetraphosphate metabolic process [GO:0015969]; leaf senescence [GO:0010150]; phosphorylation [GO:0016310]; photosynthesis [GO:0015979]; response to wounding [GO:0009611] | chloroplast [GO:0009507] | ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTP diphosphokinase activity [GO:0008728]; guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity [GO:0008893]; kinase activity [GO:0016301] | PF13328;PF04607;PF02824; | 3.10.20.30;3.30.460.10;1.10.3210.10; | RelA/SpoT family | null | SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000269|PubMed:18535838}. | CATALYTIC ACTIVITY: Reaction=ATP + GTP = AMP + guanosine 3'-diphosphate 5'-triphosphate; Xref=Rhea:RHEA:22088, ChEBI:CHEBI:30616, ChEBI:CHEBI:37565, ChEBI:CHEBI:142410, ChEBI:CHEBI:456215; EC=2.7.6.5; | null | null | null | null | FUNCTION: May be involved in a rapid plant ppGpp (guanosine 3'-diphosphate 5'-diphosphate)-mediated response to pathogens and other stresses (By similarity). Unable to functionally complement E.coli relA mutants. {ECO:0000250, ECO:0000269|PubMed:18535838}. | Arabidopsis thaliana (Mouse-ear cress) |
F4JHH5 | SC15B_ARATH | MQSSKGRRKVGSTTAGAGIDSAEKLDELLISSAICNGEDLGPFVRKTFGTGKPETLLHHLKFFARSKESEIEEVCKAHYQDFIHAVDDLKSLLSDVESLKSALSDSNSKLQSVAAPLLSSLDSLVEAQTVSKNVDLAIGAVTHCVRVMELVSRANQHLQSGNFYMALKCVDSIESDFMEKTPSSTLKRMLENRIPAIRSYVERKVNKEFGDWLVEIRVVSRNLGQLAIGEASAARQREEELRIKQRQAEEQSRLSLRDCVYALNEEEDDEFGSGHEGSDGGSSGGGLLGFDLTPLYRAYHIHQTLSLGDTFKQYYYNNRDLQLTSDFQIAGFFIVEDRVLRTGGGLISKLEVETLWDTAVTKMCAVLEDQFSRMQTANHLLLIKDYVSLLGVSLRRYGYAVDSLLEVLSKHRDKYHELLLSDCRKQITEALSADKFEQMLMKKEYEYSMNVLSFQLQTSEIVPAFPFIAPFSTTVPDCCRIVRSFIEDSVSFMSHGGQLDFYDVVKKYLDRLLGEVLDEALLKLISTSVHGVSQAMQVAANMAVFERACDFFFRHAAHLSGVPLRMAERGRRHFPLTKSQNTAEDTLSGMLKKKIDGFMTLLENVNWTSDDIPQGGNEYMNEVLIYLETLVSTAQQILPAKVLKRVLRDVLAHISEKIVGTLCGDLVKRLSMAAIKGLDVDIQLLDSFTENLTPLLTDKEAREMKKAFVEIRQMINLLLSSHPENFVNPVIRERSYNALDYRKVATVSEKFRDPSDSIFGTFGTRGSRQNPKNKSLDALIKRLKDVS | null | null | acceptance of pollen [GO:0060321]; Golgi to plasma membrane transport [GO:0006893]; intracellular protein transport [GO:0006886]; pollen germination [GO:0009846]; pollen tube growth [GO:0009860]; vesicle tethering involved in exocytosis [GO:0090522] | cytoskeleton [GO:0005856]; cytosol [GO:0005829]; exocyst [GO:0000145]; extracellular exosome [GO:0070062]; phragmoplast [GO:0009524]; plasma membrane [GO:0005886]; plasmodesma [GO:0009506] | null | PF20651;PF04091; | 1.20.58.670;1.10.357.30; | SEC15 family | null | SUBCELLULAR LOCATION: Cytoplasm, cytosol {ECO:0000269|PubMed:19895414, ECO:0000269|PubMed:24307681}. Cytoplasm, cytoskeleton, phragmoplast {ECO:0000269|PubMed:20870962}. Secreted, cell wall {ECO:0000269|PubMed:20870962}. Secreted, extracellular exosome {ECO:0000269|PubMed:24307681}. Note=Localized to globular structures in the perinuclear region. During cytokinesis, localizes to the nascent cell plate and later to the cell plate insertion site and along the post-cytokinetic wall. Shuttles from the cytoplasm to the exocyst-positive organelle (EXPO) in the presence of EXO70E2 (PubMed:24307681). {ECO:0000269|PubMed:20870962, ECO:0000269|PubMed:24307681}. | null | null | null | null | null | FUNCTION: Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane during regulated or polarized secretion. Involved in polarized cell growth and organ morphogenesis. During cytokinesis, involved in cell plate initiation, cell plate maturation and formation of new primary cell wall. {ECO:0000269|PubMed:20870962}. | Arabidopsis thaliana (Mouse-ear cress) |
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