Datasets:
ayeshgk
/
java_iter_format_small_v1

Dataset card Data Studio Files Community
1
id
int64
1
366
bug_ctx
stringlengths
72
994
fixed
stringlengths
8
123
10
[CONTEXT] public static InputReaderWrapper valueOf(Reader reader, String format) { [BUGGY] return new InputReaderWrapper(reader, format); [BUGGY] } [CLASS] InputReaderWrapper [METHOD] valueOf [RETURN_TYPE] InputReaderWrapper Reader reader String format [VARIABLES] Reader reader String format boolean DoxiaFormat format long serialVersionUID
return new InputReaderWrapper ( reader, format ) ; }
226
[CONTEXT] if (parser.getType() == Parser.XML_TYPE) { reader = ReaderFactory.newXmlReader(inputFile); } else { [BUGGY] reader = ReaderFactory.newReader(inputFile, inputEncoding); [BUGGY] } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
reader = ReaderFactory.newReader ( inputFile, inputEncoding ) ; }
267
[CONTEXT] if (StringUtils.isEmpty(output.getEncoding()) || output.getEncoding().equals(OutputFileWrapper.AUTO_ENCODING)) { outputEncoding = inputEncoding; } else { [BUGGY] outputEncoding = output.getEncoding(); } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
outputEncoding = output.getEncoding ( ) ;
358
[CONTEXT] public ConverterException(String message) { [BUGGY] super(message); [BUGGY] } [CLASS] ConverterException [METHOD] <init> [RETURN_TYPE] String) String message [VARIABLES] long serialVersionUID String message boolean
super ( message ) ; }
308
[CONTEXT] DoxiaFormat(String roleHint, String extension, String firstElement, boolean hasParser, boolean hasSink) { this.roleHint = roleHint; this.extension = extension; this.firstElement = firstElement; [BUGGY] this.hasParser = hasParser; this.hasSink = hasSink; } [CLASS] DefaultConverter DoxiaFormat [METHOD] <init> [RETURN_TYPE] String,boolean,boolean) String roleHint String extension String firstElement boolean hasParser boolean hasSink [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
this.hasParser = hasParser;
180
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { [BUGGY] return format; [BUGGY] } [BUGGY] } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
return format; } }
306
[CONTEXT] DoxiaFormat(String roleHint, String extension, String firstElement, boolean hasParser, boolean hasSink) { this.roleHint = roleHint; this.extension = extension; [BUGGY] this.firstElement = firstElement; this.hasParser = hasParser; this.hasSink = hasSink; } [CLASS] DefaultConverter DoxiaFormat [METHOD] <init> [RETURN_TYPE] String,boolean,boolean) String roleHint String extension String firstElement boolean hasParser boolean hasSink [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
this.firstElement = firstElement;
318
[CONTEXT] public boolean isXml() { [BUGGY] return firstElement != null; } [CLASS] DefaultConverter DoxiaFormat [METHOD] isXml [RETURN_TYPE] boolean [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
return firstElement != null;
232
[CONTEXT] if (parser.getType() == Parser.XML_TYPE) { reader = ReaderFactory.newXmlReader(inputFile); } else { [BUGGY] reader = ReaderFactory.newReader(inputFile, inputEncoding); } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
reader = ReaderFactory.newReader ( inputFile, inputEncoding ) ;
114
[CONTEXT] DoxiaFormat(String roleHint, String extension, boolean hasParser, boolean hasSink) { [BUGGY] this(roleHint, extension, null, hasParser, hasSink); } [CLASS] DefaultConverter DoxiaFormat [METHOD] <init> [RETURN_TYPE] String,boolean,boolean) String roleHint String extension boolean hasParser boolean hasSink [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
this ( roleHint, extension, null, hasParser, hasSink ) ;
145
[CONTEXT] public boolean hasSink() { [BUGGY] return hasSink; [BUGGY] } [CLASS] DefaultConverter DoxiaFormat [METHOD] hasSink [RETURN_TYPE] boolean [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
return hasSink; }
32
[CONTEXT] public static InputFileWrapper valueOf(String absolutePath, DefaultConverter.DoxiaFormat format) throws UnsupportedEncodingException, FileNotFoundException { [BUGGY] return valueOf(absolutePath, format, WriterFactory.UTF_8); } [CLASS] InputFileWrapper [METHOD] valueOf [RETURN_TYPE] InputFileWrapper String absolutePath DoxiaFormat format [VARIABLES] String absolutePath boolean DoxiaFormat format long serialVersionUID
return valueOf ( absolutePath, format, WriterFactory.UTF_8 ) ;
346
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { [BUGGY] if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { [BUGGY] return format; [BUGGY] } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
if ( hasFileExtensionIgnoreCase ( f.getName ( ) , format.getExtension ( ) ) ) { return format; }
198
[CONTEXT] private void parse(File inputFile, String inputEncoding, DoxiaFormat parserFormat, OutputFileWrapper output) throws ConverterException, UnsupportedFormatException { [BUGGY] parse(inputFile, inputEncoding, parserFormat, output, null); [BUGGY] } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output [VARIABLES] boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat PlexusContainer plexus String extension firstElement firstTag inputEncoding roleHint Logger LOGGER File inputFile OutputFileWrapper output
parse ( inputFile, inputEncoding, parserFormat, output, null ) ; }
170
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { [BUGGY] if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { return format; } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
if ( hasFileExtensionIgnoreCase ( f.getName ( ) , format.getExtension ( ) ) ) {
44
[CONTEXT] public static InputFileWrapper valueOf(String absolutePath, DefaultConverter.DoxiaFormat format, String charsetName) throws UnsupportedEncodingException, FileNotFoundException { [BUGGY] return new InputFileWrapper(absolutePath, format, charsetName); } [CLASS] InputFileWrapper [METHOD] valueOf [RETURN_TYPE] InputFileWrapper String absolutePath DoxiaFormat format String charsetName [VARIABLES] String absolutePath charsetName boolean DoxiaFormat format long serialVersionUID
return new InputFileWrapper ( absolutePath, format, charsetName ) ;
157
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { [BUGGY] if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { return format; } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
if ( hasFileExtensionIgnoreCase ( f.getName ( ) , format.getExtension ( ) ) ) {
172
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { [BUGGY] if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { return format; } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
if ( hasFileExtensionIgnoreCase ( f.getName ( ) , format.getExtension ( ) ) ) {
8
[CONTEXT] public static InputReaderWrapper valueOf(Reader reader, String format) { [BUGGY] return new InputReaderWrapper(reader, format); } [CLASS] InputReaderWrapper [METHOD] valueOf [RETURN_TYPE] InputReaderWrapper Reader reader String format [VARIABLES] Reader reader String format boolean DoxiaFormat format long serialVersionUID
return new InputReaderWrapper ( reader, format ) ;
364
[CONTEXT] public ConverterException(String message, Throwable cause) { [BUGGY] super(message, cause); [BUGGY] } [CLASS] ConverterException [METHOD] <init> [RETURN_TYPE] Throwable) String message Throwable cause [VARIABLES] Throwable cause String message boolean long serialVersionUID
super ( message, cause ) ; }
199
[CONTEXT] private void parse(File inputFile, String inputEncoding, DoxiaFormat parserFormat, OutputFileWrapper output) throws ConverterException, UnsupportedFormatException { [BUGGY] parse(inputFile, inputEncoding, parserFormat, output, null); } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output [VARIABLES] boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat PlexusContainer plexus String extension firstElement firstTag inputEncoding roleHint Logger LOGGER File inputFile OutputFileWrapper output
parse ( inputFile, inputEncoding, parserFormat, output, null ) ;
289
[CONTEXT] private final boolean hasParser; [CLASS] DefaultConverter DoxiaFormat [VARIABLES]
private final boolean hasSink;
160
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { [BUGGY] return format; } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
return format;
7
[CONTEXT] public static InputReaderWrapper valueOf(Reader reader, String format) { [BUGGY] return new InputReaderWrapper(reader, format); } [CLASS] InputReaderWrapper [METHOD] valueOf [RETURN_TYPE] InputReaderWrapper Reader reader String format [VARIABLES] Reader reader String format boolean DoxiaFormat format long serialVersionUID
return new InputReaderWrapper ( reader, format ) ;
94
[CONTEXT] public boolean equals(Object o) { if (this == o) { return true; } if (o == null || getClass() != o.getClass()) { return false; } if (!super.equals(o)) { [BUGGY] return false; [BUGGY] } [BUGGY] AbstractFileWrapper that = (AbstractFileWrapper) o; return Objects.equals(getFile(), that.getFile()); } [CLASS] AbstractFileWrapper [METHOD] equals [RETURN_TYPE] boolean Object o [VARIABLES] Object o String AUTO_ENCODING absolutePath encoding boolean File file filetoset AbstractFileWrapper that
return false; } AbstractFileWrapper that = ( AbstractFileWrapper ) o;
131
[CONTEXT] DoxiaFormat(String roleHint, String extension, String firstElement, boolean hasParser, boolean hasSink) { this.roleHint = roleHint; this.extension = extension; [BUGGY] this.firstElement = firstElement; this.hasParser = hasParser; this.hasSink = hasSink; } [CLASS] DefaultConverter DoxiaFormat [METHOD] <init> [RETURN_TYPE] String,boolean,boolean) String roleHint String extension String firstElement boolean hasParser boolean hasSink [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
this.firstElement = firstElement;
60
[CONTEXT] public String getEncoding() { [BUGGY] return encoding; } [CLASS] OutputStreamWrapper [METHOD] getEncoding [RETURN_TYPE] String [VARIABLES] String encoding format boolean DoxiaFormat format long serialVersionUID OutputStream out
return encoding;
106
[CONTEXT] public int hashCode() { [BUGGY] return Objects.hash(super.hashCode(), getFile()); [BUGGY] } [CLASS] AbstractFileWrapper [METHOD] hashCode [RETURN_TYPE] int [VARIABLES] File file filetoset String AUTO_ENCODING absolutePath encoding boolean
return Objects.hash ( super.hashCode ( ) , getFile ( ) ) ; }
319
[CONTEXT] public boolean isXml() { [BUGGY] return firstElement != null; } [CLASS] DefaultConverter DoxiaFormat [METHOD] isXml [RETURN_TYPE] boolean [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
return firstElement != null;
91
[CONTEXT] public boolean equals(Object o) { if (this == o) { return true; } if (o == null || getClass() != o.getClass()) { return false; } [BUGGY] if (!super.equals(o)) { [BUGGY] return false; [BUGGY] } AbstractFileWrapper that = (AbstractFileWrapper) o; return Objects.equals(getFile(), that.getFile()); } [CLASS] AbstractFileWrapper [METHOD] equals [RETURN_TYPE] boolean Object o [VARIABLES] Object o String AUTO_ENCODING absolutePath encoding boolean File file filetoset AbstractFileWrapper that
if ( !super.equals ( o ) ) { return false; }
330
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { [BUGGY] return format; [BUGGY] } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
return format; }
166
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { [BUGGY] if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { [BUGGY] return format; [BUGGY] } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
if ( hasFileExtensionIgnoreCase ( f.getName ( ) , format.getExtension ( ) ) ) { return format; }
258
[CONTEXT] if (StringUtils.isEmpty(output.getEncoding()) || output.getEncoding().equals(OutputFileWrapper.AUTO_ENCODING)) { outputEncoding = inputEncoding; } else { [BUGGY] outputEncoding = output.getEncoding(); } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
outputEncoding = output.getEncoding ( ) ;
49
[CONTEXT] private final OutputStream out; [CLASS] OutputStreamWrapper [VARIABLES]
private final String encoding;
105
[CONTEXT] public int hashCode() { [BUGGY] return Objects.hash(super.hashCode(), getFile()); } [CLASS] AbstractFileWrapper [METHOD] hashCode [RETURN_TYPE] int [VARIABLES] File file filetoset String AUTO_ENCODING absolutePath encoding boolean
return Objects.hash ( super.hashCode ( ) , getFile ( ) ) ;
234
[CONTEXT] if (parser.getType() == Parser.XML_TYPE) { reader = ReaderFactory.newXmlReader(inputFile); } else { [BUGGY] reader = ReaderFactory.newReader(inputFile, inputEncoding); } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
reader = ReaderFactory.newReader ( inputFile, inputEncoding ) ;
63
[CONTEXT] public File getFile() { [BUGGY] return file; [BUGGY] } [CLASS] AbstractFileWrapper [METHOD] getFile [RETURN_TYPE] File [VARIABLES] File file filetoset String AUTO_ENCODING absolutePath encoding boolean
return file; }
181
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { [BUGGY] return format; [BUGGY] } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
return format; }
277
[CONTEXT] private void stopPlexusContainer() { if (plexus == null) { [BUGGY] return; [BUGGY] } plexus.dispose(); plexus = null; } [CLASS] DefaultConverter DoxiaFormat [METHOD] stopPlexusContainer [RETURN_TYPE] void [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag inputEncoding outputEncoding roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat PlexusContainer plexus Logger LOGGER
return; }
329
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { [BUGGY] return format; } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
return format;
174
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { [BUGGY] if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { return format; } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
if ( hasFileExtensionIgnoreCase ( f.getName ( ) , format.getExtension ( ) ) ) {
299
[CONTEXT] DoxiaFormat(String roleHint, String extension, boolean hasParser, boolean hasSink) { [BUGGY] this(roleHint, extension, null, hasParser, hasSink); } [CLASS] DefaultConverter DoxiaFormat [METHOD] <init> [RETURN_TYPE] String,boolean,boolean) String roleHint String extension boolean hasParser boolean hasSink [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
this ( roleHint, extension, null, hasParser, hasSink ) ;
268
[CONTEXT] if (StringUtils.isEmpty(output.getEncoding()) || output.getEncoding().equals(OutputFileWrapper.AUTO_ENCODING)) { outputEncoding = inputEncoding; } else { [BUGGY] outputEncoding = output.getEncoding(); [BUGGY] } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
outputEncoding = output.getEncoding ( ) ; }
61
[CONTEXT] private File file; [CLASS] AbstractFileWrapper [VARIABLES]
private String encoding;
132
[CONTEXT] DoxiaFormat(String roleHint, String extension, String firstElement, boolean hasParser, boolean hasSink) { this.roleHint = roleHint; this.extension = extension; [BUGGY] this.firstElement = firstElement; [BUGGY] this.hasParser = hasParser; this.hasSink = hasSink; } [CLASS] DefaultConverter DoxiaFormat [METHOD] <init> [RETURN_TYPE] String,boolean,boolean) String roleHint String extension String firstElement boolean hasParser boolean hasSink [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
this.firstElement = firstElement; this.hasParser = hasParser;
152
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { [BUGGY] if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { return format; } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
if ( hasFileExtensionIgnoreCase ( f.getName ( ) , format.getExtension ( ) ) ) {
85
[CONTEXT] public boolean equals(Object o) { if (this == o) { return true; } if (o == null || getClass() != o.getClass()) { [BUGGY] return false; } if (!super.equals(o)) { return false; } AbstractFileWrapper that = (AbstractFileWrapper) o; return Objects.equals(getFile(), that.getFile()); } [CLASS] AbstractFileWrapper [METHOD] equals [RETURN_TYPE] boolean Object o [VARIABLES] Object o String AUTO_ENCODING absolutePath encoding boolean File file filetoset AbstractFileWrapper that
return false;
9
[CONTEXT] public static InputReaderWrapper valueOf(Reader reader, String format) { [BUGGY] return new InputReaderWrapper(reader, format); } [CLASS] InputReaderWrapper [METHOD] valueOf [RETURN_TYPE] InputReaderWrapper Reader reader String format [VARIABLES] Reader reader String format boolean DoxiaFormat format long serialVersionUID
return new InputReaderWrapper ( reader, format ) ;
263
[CONTEXT] if (StringUtils.isEmpty(output.getEncoding()) || output.getEncoding().equals(OutputFileWrapper.AUTO_ENCODING)) { outputEncoding = inputEncoding; } else { [BUGGY] outputEncoding = output.getEncoding(); } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
outputEncoding = output.getEncoding ( ) ;
176
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { [BUGGY] if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { [BUGGY] return format; [BUGGY] } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
if ( hasFileExtensionIgnoreCase ( f.getName ( ) , format.getExtension ( ) ) ) { return format; }
352
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { [BUGGY] if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { return format; } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
if ( hasFileExtensionIgnoreCase ( f.getName ( ) , format.getExtension ( ) ) ) {
19
[CONTEXT] public static OutputFileWrapper valueOf(String absolutePath, DefaultConverter.DoxiaFormat format) throws UnsupportedEncodingException { [BUGGY] return valueOf(absolutePath, format, WriterFactory.UTF_8); [BUGGY] } [CLASS] OutputFileWrapper [METHOD] valueOf [RETURN_TYPE] OutputFileWrapper String absolutePath DoxiaFormat format [VARIABLES] String absolutePath boolean DoxiaFormat format long serialVersionUID
return valueOf ( absolutePath, format, WriterFactory.UTF_8 ) ; }
2
[CONTEXT] private static final Options OPTIONS; [CLASS] CLIManager [VARIABLES]
private static final String EOL = System.lineSeparator ( ) ;
257
[CONTEXT] if (StringUtils.isEmpty(output.getEncoding()) || output.getEncoding().equals(OutputFileWrapper.AUTO_ENCODING)) { outputEncoding = inputEncoding; } else { [BUGGY] outputEncoding = output.getEncoding(); } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
outputEncoding = output.getEncoding ( ) ;
158
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { [BUGGY] if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { [BUGGY] return format; [BUGGY] } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
if ( hasFileExtensionIgnoreCase ( f.getName ( ) , format.getExtension ( ) ) ) { return format; }
59
[CONTEXT] public OutputStream getOutputStream() { [BUGGY] return this.out; } [CLASS] OutputStreamWrapper [METHOD] getOutputStream [RETURN_TYPE] OutputStream [VARIABLES] String encoding format boolean DoxiaFormat format long serialVersionUID OutputStream out
return this.out;
242
[CONTEXT] if (inputEncoding != null) { if (parser.getType() == Parser.XML_TYPE) { reader = ReaderFactory.newXmlReader(inputFile); } else { reader = ReaderFactory.newReader(inputFile, inputEncoding); } } else { [BUGGY] reader = ReaderFactory.newPlatformReader(inputFile); [BUGGY] } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
reader = ReaderFactory.newPlatformReader ( inputFile ) ; } } catch ( IOException e ) {
313
[CONTEXT] DoxiaFormat(String roleHint, String extension, String firstElement, boolean hasParser, boolean hasSink) { this.roleHint = roleHint; this.extension = extension; this.firstElement = firstElement; this.hasParser = hasParser; [BUGGY] this.hasSink = hasSink; } [CLASS] DefaultConverter DoxiaFormat [METHOD] <init> [RETURN_TYPE] String,boolean,boolean) String roleHint String extension String firstElement boolean hasParser boolean hasSink [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
this.hasSink = hasSink;
6
[CONTEXT] public DefaultConverter.DoxiaFormat getFormat() { [BUGGY] return format; [BUGGY] } [CLASS] InputReaderWrapper [METHOD] getFormat [RETURN_TYPE] DoxiaFormat [VARIABLES] Reader reader boolean DoxiaFormat format long serialVersionUID
return format; }
87
[CONTEXT] public boolean equals(Object o) { if (this == o) { return true; } [BUGGY] if (o == null || getClass() != o.getClass()) { return false; } if (!super.equals(o)) { return false; } AbstractFileWrapper that = (AbstractFileWrapper) o; return Objects.equals(getFile(), that.getFile()); } [CLASS] AbstractFileWrapper [METHOD] equals [RETURN_TYPE] boolean Object o [VARIABLES] Object o String AUTO_ENCODING absolutePath encoding boolean File file filetoset AbstractFileWrapper that
if ( o == null || getClass ( ) != o.getClass ( ) ) {
249
[CONTEXT] if (StringUtils.isEmpty(output.getEncoding()) || output.getEncoding().equals(OutputFileWrapper.AUTO_ENCODING)) { outputEncoding = inputEncoding; } else { [BUGGY] outputEncoding = output.getEncoding(); } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
outputEncoding = output.getEncoding ( ) ;
365
[CONTEXT] public ConverterException(String message, Throwable cause) { [BUGGY] super(message, cause); } [CLASS] ConverterException [METHOD] <init> [RETURN_TYPE] Throwable) String message Throwable cause [VARIABLES] Throwable cause String message boolean long serialVersionUID
super ( message, cause ) ;
317
[CONTEXT] public boolean hasSink() { [BUGGY] return hasSink; } [CLASS] DefaultConverter DoxiaFormat [METHOD] hasSink [RETURN_TYPE] boolean [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
return hasSink;
31
[CONTEXT] public static InputFileWrapper valueOf(String absolutePath, DefaultConverter.DoxiaFormat format) throws UnsupportedEncodingException, FileNotFoundException { [BUGGY] return valueOf(absolutePath, format, WriterFactory.UTF_8); } [CLASS] InputFileWrapper [METHOD] valueOf [RETURN_TYPE] InputFileWrapper String absolutePath DoxiaFormat format [VARIABLES] String absolutePath boolean DoxiaFormat format long serialVersionUID
return valueOf ( absolutePath, format, WriterFactory.UTF_8 ) ;
116
[CONTEXT] DoxiaFormat(String roleHint, String extension, boolean hasParser, boolean hasSink) { [BUGGY] this(roleHint, extension, null, hasParser, hasSink); } [CLASS] DefaultConverter DoxiaFormat [METHOD] <init> [RETURN_TYPE] String,boolean,boolean) String roleHint String extension boolean hasParser boolean hasSink [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
this ( roleHint, extension, null, hasParser, hasSink ) ;
133
[CONTEXT] DoxiaFormat(String roleHint, String extension, String firstElement, boolean hasParser, boolean hasSink) { this.roleHint = roleHint; this.extension = extension; [BUGGY] this.firstElement = firstElement; this.hasParser = hasParser; this.hasSink = hasSink; } [CLASS] DefaultConverter DoxiaFormat [METHOD] <init> [RETURN_TYPE] String,boolean,boolean) String roleHint String extension String firstElement boolean hasParser boolean hasSink [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
this.firstElement = firstElement;
262
[CONTEXT] if (StringUtils.isEmpty(output.getEncoding()) || output.getEncoding().equals(OutputFileWrapper.AUTO_ENCODING)) { outputEncoding = inputEncoding; } else { [BUGGY] outputEncoding = output.getEncoding(); } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
outputEncoding = output.getEncoding ( ) ;
207
[CONTEXT] if (inputEncoding != null) { if (parser.getType() == Parser.XML_TYPE) { reader = ReaderFactory.newXmlReader(inputFile); } else { reader = ReaderFactory.newReader(inputFile, inputEncoding); } } else { [BUGGY] reader = ReaderFactory.newPlatformReader(inputFile); [BUGGY] } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
reader = ReaderFactory.newPlatformReader ( inputFile ) ; }
284
[CONTEXT] private void stopPlexusContainer() { if (plexus == null) { return; } plexus.dispose(); [BUGGY] plexus = null; } [CLASS] DefaultConverter DoxiaFormat [METHOD] stopPlexusContainer [RETURN_TYPE] void [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag inputEncoding outputEncoding roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat PlexusContainer plexus Logger LOGGER
plexus = null;
103
[CONTEXT] public boolean equals(Object o) { if (this == o) { return true; } if (o == null || getClass() != o.getClass()) { return false; } if (!super.equals(o)) { return false; } AbstractFileWrapper that = (AbstractFileWrapper) o; [BUGGY] return Objects.equals(getFile(), that.getFile()); [BUGGY] } [CLASS] AbstractFileWrapper [METHOD] equals [RETURN_TYPE] boolean Object o [VARIABLES] Object o String AUTO_ENCODING absolutePath encoding boolean File file filetoset AbstractFileWrapper that
return Objects.equals ( getFile ( ) , that.getFile ( ) ) ; }
331
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { [BUGGY] return format; [BUGGY] } [BUGGY] } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
return format; } }
355
[CONTEXT] [BUGGY] static final long serialVersionUID = -4334290887832961366L; [CLASS] UnsupportedFormatException [VARIABLES]
static final long serialVersionUID = -4334290887832961366L;
204
[CONTEXT] if (inputEncoding != null) { if (parser.getType() == Parser.XML_TYPE) { reader = ReaderFactory.newXmlReader(inputFile); } else { reader = ReaderFactory.newReader(inputFile, inputEncoding); } } else { [BUGGY] reader = ReaderFactory.newPlatformReader(inputFile); } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
reader = ReaderFactory.newPlatformReader ( inputFile ) ;
55
[CONTEXT] private OutputStreamWrapper(OutputStream out, String format, String encoding) { [BUGGY] this.format = DefaultConverter.DoxiaFormat.valueOf(format.toUpperCase()); [BUGGY] this.out = out; [BUGGY] this.encoding = encoding; [BUGGY] } [CLASS] OutputStreamWrapper [METHOD] <init> [RETURN_TYPE] String) OutputStream out String format String encoding [VARIABLES] String encoding format boolean DoxiaFormat format long serialVersionUID OutputStream out
this.format = DefaultConverter.DoxiaFormat.valueOf ( format.toUpperCase ( ) ) ; this.out = out; this.encoding = encoding; }
251
[CONTEXT] if (StringUtils.isEmpty(output.getEncoding()) || output.getEncoding().equals(OutputFileWrapper.AUTO_ENCODING)) { outputEncoding = inputEncoding; } else { [BUGGY] outputEncoding = output.getEncoding(); } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
outputEncoding = output.getEncoding ( ) ;
210
[CONTEXT] if (parser.getType() == Parser.XML_TYPE) { reader = ReaderFactory.newXmlReader(inputFile); } else { [BUGGY] reader = ReaderFactory.newReader(inputFile, inputEncoding); } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
reader = ReaderFactory.newReader ( inputFile, inputEncoding ) ;
202
[CONTEXT] if (inputEncoding != null) { if (parser.getType() == Parser.XML_TYPE) { reader = ReaderFactory.newXmlReader(inputFile); } else { reader = ReaderFactory.newReader(inputFile, inputEncoding); } } else { [BUGGY] reader = ReaderFactory.newPlatformReader(inputFile); } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
reader = ReaderFactory.newPlatformReader ( inputFile ) ;
265
[CONTEXT] if (StringUtils.isEmpty(output.getEncoding()) || output.getEncoding().equals(OutputFileWrapper.AUTO_ENCODING)) { outputEncoding = inputEncoding; } else { [BUGGY] outputEncoding = output.getEncoding(); } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
outputEncoding = output.getEncoding ( ) ;
43
[CONTEXT] public static InputFileWrapper valueOf(String absolutePath, DefaultConverter.DoxiaFormat format, String charsetName) throws UnsupportedEncodingException, FileNotFoundException { [BUGGY] return new InputFileWrapper(absolutePath, format, charsetName); } [CLASS] InputFileWrapper [METHOD] valueOf [RETURN_TYPE] InputFileWrapper String absolutePath DoxiaFormat format String charsetName [VARIABLES] String absolutePath charsetName boolean DoxiaFormat format long serialVersionUID
return new InputFileWrapper ( absolutePath, format, charsetName ) ;
363
[CONTEXT] public ConverterException(String message, Throwable cause) { [BUGGY] super(message, cause); } [CLASS] ConverterException [METHOD] <init> [RETURN_TYPE] Throwable) String message Throwable cause [VARIABLES] Throwable cause String message boolean long serialVersionUID
super ( message, cause ) ;
122
[CONTEXT] DoxiaFormat(String roleHint, String extension, boolean hasParser, boolean hasSink) { [BUGGY] this(roleHint, extension, null, hasParser, hasSink); } [CLASS] DefaultConverter DoxiaFormat [METHOD] <init> [RETURN_TYPE] String,boolean,boolean) String roleHint String extension boolean hasParser boolean hasSink [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
this ( roleHint, extension, null, hasParser, hasSink ) ;
169
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { [BUGGY] if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { return format; } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
if ( hasFileExtensionIgnoreCase ( f.getName ( ) , format.getExtension ( ) ) ) {
324
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { [BUGGY] if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { return format; } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
if ( hasFileExtensionIgnoreCase ( f.getName ( ) , format.getExtension ( ) ) ) {
33
[CONTEXT] public static InputFileWrapper valueOf(String absolutePath, DefaultConverter.DoxiaFormat format) throws UnsupportedEncodingException, FileNotFoundException { [BUGGY] return valueOf(absolutePath, format, WriterFactory.UTF_8); } [CLASS] InputFileWrapper [METHOD] valueOf [RETURN_TYPE] InputFileWrapper String absolutePath DoxiaFormat format [VARIABLES] String absolutePath boolean DoxiaFormat format long serialVersionUID
return valueOf ( absolutePath, format, WriterFactory.UTF_8 ) ;
294
[CONTEXT] DoxiaFormat(String roleHint, String extension, boolean hasParser, boolean hasSink) { [BUGGY] this(roleHint, extension, null, hasParser, hasSink); } [CLASS] DefaultConverter DoxiaFormat [METHOD] <init> [RETURN_TYPE] String,boolean,boolean) String roleHint String extension boolean hasParser boolean hasSink [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
this ( roleHint, extension, null, hasParser, hasSink ) ;
18
[CONTEXT] public static OutputFileWrapper valueOf(String absolutePath, DefaultConverter.DoxiaFormat format) throws UnsupportedEncodingException { [BUGGY] return valueOf(absolutePath, format, WriterFactory.UTF_8); [BUGGY] } [CLASS] OutputFileWrapper [METHOD] valueOf [RETURN_TYPE] OutputFileWrapper String absolutePath DoxiaFormat format [VARIABLES] String absolutePath boolean DoxiaFormat format long serialVersionUID
return valueOf ( absolutePath, format, WriterFactory.UTF_8 ) ; }
125
[CONTEXT] DoxiaFormat(String roleHint, String extension, boolean hasParser, boolean hasSink) { [BUGGY] this(roleHint, extension, null, hasParser, hasSink); } [CLASS] DefaultConverter DoxiaFormat [METHOD] <init> [RETURN_TYPE] String,boolean,boolean) String roleHint String extension boolean hasParser boolean hasSink [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
this ( roleHint, extension, null, hasParser, hasSink ) ;
22
[CONTEXT] public static OutputFileWrapper valueOf( String absolutePath, DefaultConverter.DoxiaFormat format, String charsetName) throws UnsupportedEncodingException { [BUGGY] return new OutputFileWrapper(absolutePath, format, charsetName); } [CLASS] OutputFileWrapper [METHOD] valueOf [RETURN_TYPE] OutputFileWrapper String absolutePath DoxiaFormat format String charsetName [VARIABLES] String absolutePath charsetName boolean DoxiaFormat format long serialVersionUID
return new OutputFileWrapper ( absolutePath, format, charsetName ) ;
21
[CONTEXT] public static OutputFileWrapper valueOf( String absolutePath, DefaultConverter.DoxiaFormat format, String charsetName) throws UnsupportedEncodingException { [BUGGY] return new OutputFileWrapper(absolutePath, format, charsetName); } [CLASS] OutputFileWrapper [METHOD] valueOf [RETURN_TYPE] OutputFileWrapper String absolutePath DoxiaFormat format String charsetName [VARIABLES] String absolutePath charsetName boolean DoxiaFormat format long serialVersionUID
return new OutputFileWrapper ( absolutePath, format, charsetName ) ;
146
[CONTEXT] public boolean isXml() { [BUGGY] return firstElement != null; } [CLASS] DefaultConverter DoxiaFormat [METHOD] isXml [RETURN_TYPE] boolean [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
return firstElement != null;
300
[CONTEXT] DoxiaFormat(String roleHint, String extension, String firstElement, boolean hasParser, boolean hasSink) { [BUGGY] this.roleHint = roleHint; this.extension = extension; this.firstElement = firstElement; this.hasParser = hasParser; this.hasSink = hasSink; } [CLASS] DefaultConverter DoxiaFormat [METHOD] <init> [RETURN_TYPE] String,boolean,boolean) String roleHint String extension String firstElement boolean hasParser boolean hasSink [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
this.roleHint = roleHint;
15
[CONTEXT] public static OutputFileWrapper valueOf(String absolutePath, DefaultConverter.DoxiaFormat format) throws UnsupportedEncodingException { [BUGGY] return valueOf(absolutePath, format, WriterFactory.UTF_8); } [CLASS] OutputFileWrapper [METHOD] valueOf [RETURN_TYPE] OutputFileWrapper String absolutePath DoxiaFormat format [VARIABLES] String absolutePath boolean DoxiaFormat format long serialVersionUID
return valueOf ( absolutePath, format, WriterFactory.UTF_8 ) ;
62
[CONTEXT] public File getFile() { [BUGGY] return file; } [CLASS] AbstractFileWrapper [METHOD] getFile [RETURN_TYPE] File [VARIABLES] File file filetoset String AUTO_ENCODING absolutePath encoding boolean
return file;
273
[CONTEXT] private void stopPlexusContainer() { [BUGGY] if (plexus == null) { [BUGGY] return; [BUGGY] } plexus.dispose(); plexus = null; } [CLASS] DefaultConverter DoxiaFormat [METHOD] stopPlexusContainer [RETURN_TYPE] void [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag inputEncoding outputEncoding roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat PlexusContainer plexus Logger LOGGER
if ( plexus == null ) { return; }
93
[CONTEXT] public boolean equals(Object o) { if (this == o) { return true; } if (o == null || getClass() != o.getClass()) { return false; } if (!super.equals(o)) { [BUGGY] return false; } AbstractFileWrapper that = (AbstractFileWrapper) o; return Objects.equals(getFile(), that.getFile()); } [CLASS] AbstractFileWrapper [METHOD] equals [RETURN_TYPE] boolean Object o [VARIABLES] Object o String AUTO_ENCODING absolutePath encoding boolean File file filetoset AbstractFileWrapper that
return false;
228
[CONTEXT] if (parser.getType() == Parser.XML_TYPE) { reader = ReaderFactory.newXmlReader(inputFile); } else { [BUGGY] reader = ReaderFactory.newReader(inputFile, inputEncoding); } [CLASS] DefaultConverter DoxiaFormat [METHOD] parse [RETURN_TYPE] void File inputFile String inputEncoding DoxiaFormat parserFormat OutputFileWrapper output File relativeOutputDirectory [VARIABLES] PlexusContainer plexus OutputStream out Reader r reader ComponentLookupException e String extension firstElement firstTag inputEncoding outputEncoding roleHint IOException e Logger LOGGER OutputFileWrapper output CharArrayWriter caw Parser parser boolean formatOutput hasParser hasSink DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format parserFormat Sink sink SinkFactory sinkFactory File inputFile outputDirectoryOrFile outputFile relativeOutputDirectory Writer w
reader = ReaderFactory.newReader ( inputFile, inputEncoding ) ;
5
[CONTEXT] public Reader getReader() { [BUGGY] return this.reader; } [CLASS] InputReaderWrapper [METHOD] getReader [RETURN_TYPE] Reader [VARIABLES] Reader reader boolean DoxiaFormat format long serialVersionUID
return this.reader;
290
[CONTEXT] DoxiaFormat(String roleHint, String extension, boolean hasParser, boolean hasSink) { [BUGGY] this(roleHint, extension, null, hasParser, hasSink); } [CLASS] DefaultConverter DoxiaFormat [METHOD] <init> [RETURN_TYPE] String,boolean,boolean) String roleHint String extension boolean hasParser boolean hasSink [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 PlexusContainer plexus Logger LOGGER
this ( roleHint, extension, null, hasParser, hasSink ) ;
83
[CONTEXT] public boolean equals(Object o) { if (this == o) { return true; } [BUGGY] if (o == null || getClass() != o.getClass()) { [BUGGY] return false; [BUGGY] } if (!super.equals(o)) { return false; } AbstractFileWrapper that = (AbstractFileWrapper) o; return Objects.equals(getFile(), that.getFile()); } [CLASS] AbstractFileWrapper [METHOD] equals [RETURN_TYPE] boolean Object o [VARIABLES] Object o String AUTO_ENCODING absolutePath encoding boolean File file filetoset AbstractFileWrapper that
if ( o == null || getClass ( ) != o.getClass ( ) ) { return false; }
154
[CONTEXT] if (format.isXml()) { String firstTag = getFirstTag(f); if (firstTag == null) { continue; } if (firstTag.equals(format.firstElement)) { return format; } } else { [BUGGY] if (hasFileExtensionIgnoreCase(f.getName(), format.getExtension())) { return format; } } [CLASS] DefaultConverter DoxiaFormat [METHOD] autoDetectFormat [RETURN_TYPE] DefaultConverter$DoxiaFormat File f [VARIABLES] boolean formatOutput hasParser hasSink String extension firstElement firstTag roleHint DoxiaFormat APT FML MARKDOWN XDOC XHTML5 format PlexusContainer plexus Logger LOGGER File f
if ( hasFileExtensionIgnoreCase ( f.getName ( ) , format.getExtension ( ) ) ) {