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DS.d0
17003041
[ { "id": "DS.d0.s0", "type": "", "text": [ "Bestrophin-1 enables Ca2+-activated Cl-conductance in epithelia." ], "offsets": [ [ 0, 64 ] ] }, { "id": "DS.d0.s1", "type": "", "text": [ "Calcium-dependent Cl (-) currents were activated by ATP in HEK293 cells expressing BEST1." ], "offsets": [ [ 65, 154 ] ] } ]
[ { "id": "DS.d0.s0.e0", "type": "protein", "text": [ "Bestrophin-1" ], "offsets": [ [ 0, 12 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O76090" }, { "db_name": "UniProt", "db_id": "O88870" }, { "db_name": "UniProt", "db_id": "Q21973" }, { "db_name": "UniProt", "db_id": "Q6UY87" }, { "db_name": "UniProt", "db_id": "Q8WMR7" } ] }, { "id": "DS.d0.s0.e1", "type": "compound", "text": [ "Cl" ], "offsets": [ [ 36, 38 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "312" } ] }, { "id": "DS.d0.s1.e0", "type": "compound", "text": [ "Cl" ], "offsets": [ [ 83, 85 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "312" } ] }, { "id": "DS.d0.s1.e1", "type": "compound", "text": [ "ATP" ], "offsets": [ [ 117, 120 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5957" } ] }, { "id": "DS.d0.s1.e2", "type": "protein", "text": [ "BEST1" ], "offsets": [ [ 148, 153 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O76090" }, { "db_name": "UniProt", "db_id": "Q6UY87" }, { "db_name": "UniProt", "db_id": "Q8WMR7" } ] } ]
[]
[]
[ { "id": "DS.d0.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d0.s0.e1", "arg2_id": "DS.d0.s0.e0", "normalized": [] } ]
DS.d1
17321121
[ { "id": "DS.d1.s0", "type": "", "text": [ "The absorption spectrum of the hydrogenase enzyme showed an absorption peak at 425nm indicating that the enzyme had iron-sulfur clusters." ], "offsets": [ [ 0, 137 ] ] } ]
[ { "id": "DS.d1.s0.e0", "type": "protein", "text": [ "hydrogenase" ], "offsets": [ [ 31, 42 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P80509" }, { "db_name": "UniProt", "db_id": "P80510" } ] }, { "id": "DS.d1.s0.e1", "type": "compound", "text": [ "sulfur" ], "offsets": [ [ 121, 127 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "402" } ] } ]
[]
[]
[ { "id": "DS.d1.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d1.s0.e1", "arg2_id": "DS.d1.s0.e0", "normalized": [] } ]
DS.d2
17403602
[ { "id": "DS.d2.s0", "type": "", "text": [ "When Vitreoscilla were grown in medium containing 60mM sodium nitrite under both normal and limited aeration conditions, the levels of Vitreoscilla hemoglobin (VHb) were decreased by greater than 90%, while the levels of the terminal respiratory oxidase, cytochrome bo, were increased 350% under normal aeration and 7-23% under limited aeration." ], "offsets": [ [ 0, 345 ] ] } ]
[ { "id": "DS.d2.s0.e0", "type": "compound", "text": [ "sodium nitrite" ], "offsets": [ [ 55, 69 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "23668193" } ] }, { "id": "DS.d2.s0.e1", "type": "protein", "text": [ "hemoglobin" ], "offsets": [ [ 148, 158 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P15160" }, { "db_name": "UniProt", "db_id": "P17724" }, { "db_name": "UniProt", "db_id": "P73925" }, { "db_name": "UniProt", "db_id": "Q03459" } ] } ]
[]
[]
[ { "id": "DS.d2.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d2.s0.e0", "arg2_id": "DS.d2.s0.e1", "normalized": [] } ]
DS.d3
17590240
[ { "id": "DS.d3.s0", "type": "", "text": [ "Epigallocatechin gallate (EGCG) suppresses beta-amyloid-induced neurotoxicity through inhibiting c-Abl/FE65 nuclear translocation and GSK3 beta activation." ], "offsets": [ [ 0, 155 ] ] }, { "id": "DS.d3.s1", "type": "", "text": [ "Here, we used a human neuronal cell line MC65 conditional expression of an amyloid precursor protein fragment (APP-C99) to investigate the protection mechanism of epigallocatechin gallate (EGCG), the main constituent of green tea." ], "offsets": [ [ 156, 386 ] ] } ]
[ { "id": "DS.d3.s0.e0", "type": "compound", "text": [ "Epigallocatechin gallate (EGCG" ], "offsets": [ [ 0, 30 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "65064" } ] }, { "id": "DS.d3.s0.e1", "type": "protein", "text": [ "Abl" ], "offsets": [ [ 99, 102 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P00520" }, { "db_name": "UniProt", "db_id": "P00522" } ] }, { "id": "DS.d3.s0.e2", "type": "protein", "text": [ "FE65" ], "offsets": [ [ 103, 107 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O00213" } ] }, { "id": "DS.d3.s0.e3", "type": "protein", "text": [ "GSK3 beta" ], "offsets": [ [ 134, 143 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P18266" }, { "db_name": "UniProt", "db_id": "P49841" }, { "db_name": "UniProt", "db_id": "Q5YJC2" }, { "db_name": "UniProt", "db_id": "Q9WV60" } ] }, { "id": "DS.d3.s1.e0", "type": "protein", "text": [ "APP-C99" ], "offsets": [ [ 267, 274 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P12023" } ] }, { "id": "DS.d3.s1.e1", "type": "compound", "text": [ "epigallocatechin gallate (EGCG" ], "offsets": [ [ 319, 349 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "65064" } ] }, { "id": "DS.d3.s1.e2", "type": "compound", "text": [ "green tea" ], "offsets": [ [ 376, 385 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "4630" } ] } ]
[]
[]
[ { "id": "DS.d3.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d3.s0.e0", "arg2_id": "DS.d3.s0.e3", "normalized": [] }, { "id": "DS.d3.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d3.s0.e0", "arg2_id": "DS.d3.s0.e1", "normalized": [] }, { "id": "DS.d3.s0.i2", "type": "compound-protein-interaction", "arg1_id": "DS.d3.s0.e0", "arg2_id": "DS.d3.s0.e2", "normalized": [] } ]
DS.d4
17616381
[ { "id": "DS.d4.s0", "type": "", "text": [ "The protease was purified to homogeneity using ammonium sulfate precipitation, and ion exchange chromatography with a fold purification of 1.8 and a recovery of 49%." ], "offsets": [ [ 0, 165 ] ] } ]
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"P04585" }, { "db_name": "UniProt", "db_id": "P04587" }, { "db_name": "UniProt", "db_id": "P04588" }, { "db_name": "UniProt", "db_id": "P04589" }, { "db_name": "UniProt", "db_id": "P05959" }, { "db_name": "UniProt", "db_id": "P05960" }, { "db_name": "UniProt", "db_id": "P05961" }, { "db_name": "UniProt", "db_id": "P05962" }, { "db_name": "UniProt", "db_id": "P07570" }, { "db_name": "UniProt", "db_id": "P0C210" }, { "db_name": "UniProt", "db_id": "P0C211" }, { "db_name": "UniProt", "db_id": "P10210" }, { "db_name": "UniProt", "db_id": "P10265" }, { "db_name": "UniProt", "db_id": "P10270" }, { "db_name": "UniProt", "db_id": "P10271" }, { "db_name": "UniProt", "db_id": "P10272" }, { "db_name": "UniProt", "db_id": "P10273" }, { "db_name": "UniProt", "db_id": "P10274" }, { "db_name": "UniProt", "db_id": "P10394" }, { "db_name": "UniProt", "db_id": "P10978" }, { "db_name": "UniProt", "db_id": "P11227" }, { "db_name": "UniProt", "db_id": "P11365" }, { "db_name": "UniProt", "db_id": "P12451" 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"db_name": "UniProt", "db_id": "P21414" }, { "db_name": "UniProt", "db_id": "P24107" }, { "db_name": "UniProt", "db_id": "P24740" }, { "db_name": "UniProt", "db_id": "P26808" }, { "db_name": "UniProt", "db_id": "P26809" }, { "db_name": "UniProt", "db_id": "P26810" }, { "db_name": "UniProt", "db_id": "P27502" }, { "db_name": "UniProt", "db_id": "P28936" }, { "db_name": "UniProt", "db_id": "P31822" }, { "db_name": "UniProt", "db_id": "P35956" }, { "db_name": "UniProt", "db_id": "P35963" }, { "db_name": "UniProt", "db_id": "P51518" }, { "db_name": "UniProt", "db_id": "P63119" }, { "db_name": "UniProt", "db_id": "P63120" }, { "db_name": "UniProt", "db_id": "P63121" }, { "db_name": "UniProt", "db_id": "P63122" }, { "db_name": "UniProt", "db_id": "P63123" }, { "db_name": "UniProt", "db_id": "P63124" }, { "db_name": "UniProt", "db_id": "P63125" }, { "db_name": "UniProt", "db_id": "P63127" }, { "db_name": "UniProt", "db_id": "P63128" }, { "db_name": "UniProt", "db_id": "P63129" }, { "db_name": "UniProt", "db_id": "P63131" }, { "db_name": "UniProt", "db_id": "P84454" }, { "db_name": "UniProt", "db_id": "Q09SZ9" }, { "db_name": "UniProt", "db_id": "Q0R5R2" }, { "db_name": "UniProt", "db_id": "Q0R5R3" }, { "db_name": "UniProt", "db_id": "Q1A249" }, { "db_name": "UniProt", "db_id": "Q1A267" }, { "db_name": "UniProt", "db_id": "Q4U0X6" }, { "db_name": "UniProt", "db_id": "Q73368" }, { "db_name": "UniProt", "db_id": "Q74120" }, { "db_name": "UniProt", "db_id": "Q75002" }, { "db_name": "UniProt", "db_id": "Q76634" }, { "db_name": "UniProt", "db_id": "Q77373" }, { "db_name": "UniProt", "db_id": "Q79666" }, { "db_name": "UniProt", "db_id": "Q89928" }, { "db_name": "UniProt", "db_id": "Q8AII1" }, { "db_name": "UniProt", "db_id": "Q8I7P9" }, { "db_name": "UniProt", "db_id": "Q9IDV9" }, { "db_name": "UniProt", "db_id": "Q9Q720" }, { "db_name": "UniProt", "db_id": "Q9QBY3" }, { "db_name": "UniProt", "db_id": "Q9QBZ1" }, { "db_name": "UniProt", "db_id": "Q9QBZ5" }, { "db_name": "UniProt", "db_id": "Q9QSR3" }, { "db_name": "UniProt", "db_id": "Q9WC54" }, { "db_name": "UniProt", "db_id": "Q9WC63" }, { "db_name": "UniProt", "db_id": "Q9Y6I0" } ] }, { "id": "DS.d4.s0.e1", "type": "compound", "text": [ "ammonium" ], "offsets": [ [ 47, 55 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "223" } ] }, { "id": "DS.d4.s0.e2", "type": "compound", "text": [ "sulfate" ], "offsets": [ [ 56, 63 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "1117" } ] } ]
[]
[]
[]
DS.d5
17629591
[ { "id": "DS.d5.s0", "type": "", "text": [ "In addition, we demonstrated that Hsp20, HspB2 and HspB8 induced interleukin-6 production in cultured pericytes and astrocytes, which could be antagonized by dexamethasone, whereas other sHsps and A beta were inactive, suggesting that sHsps may be among the key mediators of the local inflammatory response associated with HCHWA-D and AD lesions." ], "offsets": [ [ 0, 346 ] ] } ]
[ { "id": "DS.d5.s0.e0", "type": "protein", "text": [ "HspB2" ], "offsets": [ [ 41, 46 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O35878" }, { "db_name": "UniProt", "db_id": "Q16082" }, { "db_name": "UniProt", "db_id": "Q99PR8" } ] }, { "id": "DS.d5.s0.e1", "type": "protein", "text": [ "HspB8" ], "offsets": [ [ 51, 56 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "Q5EAC9" }, { "db_name": "UniProt", "db_id": "Q5RAB0" }, { "db_name": "UniProt", "db_id": "Q6SJQ8" }, { "db_name": "UniProt", "db_id": "Q8MJ36" }, { "db_name": "UniProt", "db_id": "Q9EPX0" }, { "db_name": "UniProt", "db_id": "Q9JK92" }, { "db_name": "UniProt", "db_id": "Q9UJY1" } ] }, { "id": "DS.d5.s0.e2", "type": "protein", "text": [ "interleukin-6" ], "offsets": [ [ 65, 78 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P41693" } ] }, { "id": "DS.d5.s0.e3", "type": "compound", "text": [ "dexamethasone" ], "offsets": [ [ 158, 171 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5743" } ] } ]
[]
[]
[ { "id": "DS.d5.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d5.s0.e3", "arg2_id": "DS.d5.s0.e2", "normalized": [] } ]
DS.d6
17692997
[ { "id": "DS.d6.s0", "type": "", "text": [ "Furthermore, dithiothreitol was found to be capable of significantly preventing the inhibitory effect of insulin on Abeta oligomer formation." ], "offsets": [ [ 0, 141 ] ] } ]
[ { "id": "DS.d6.s0.e0", "type": "compound", "text": [ "dithiothreitol" ], "offsets": [ [ 13, 27 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "19001" }, { "db_name": "PubChem", "db_id": "439196" }, { "db_name": "PubChem", "db_id": "446094" } ] }, { "id": "DS.d6.s0.e1", "type": "protein", "text": [ "insulin" ], "offsets": [ [ 105, 112 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P01314" }, { "db_name": "UniProt", "db_id": "P01316" }, { "db_name": "UniProt", "db_id": "P01319" }, { "db_name": "UniProt", "db_id": "P01320" }, { "db_name": "UniProt", "db_id": "P01324" }, { "db_name": "UniProt", "db_id": "P01328" }, { "db_name": "UniProt", "db_id": "P01330" }, { "db_name": "UniProt", "db_id": "P01331" }, { "db_name": "UniProt", "db_id": "P01334" }, { "db_name": "UniProt", "db_id": "P01336" }, { "db_name": "UniProt", "db_id": "P01340" }, { "db_name": "UniProt", "db_id": "P07453" }, { "db_name": "UniProt", "db_id": "P09476" }, { "db_name": "UniProt", "db_id": "P09477" }, { "db_name": "UniProt", "db_id": "P0C236" }, { "db_name": "UniProt", "db_id": "P12703" }, { "db_name": "UniProt", "db_id": "P12704" }, { "db_name": "UniProt", "db_id": "P12708" }, { "db_name": "UniProt", "db_id": "P13190" }, { "db_name": "UniProt", "db_id": "P18109" }, { "db_name": "UniProt", "db_id": "P29335" }, { "db_name": "UniProt", "db_id": "P42633" }, { "db_name": "UniProt", "db_id": "P67968" }, { "db_name": "UniProt", "db_id": "P67969" }, { "db_name": "UniProt", "db_id": "P67971" }, { "db_name": "UniProt", "db_id": "P67973" }, { "db_name": "UniProt", "db_id": "P67974" }, { "db_name": "UniProt", "db_id": "P68243" }, { "db_name": "UniProt", "db_id": "P68245" }, { "db_name": "UniProt", "db_id": "P68987" }, { "db_name": "UniProt", "db_id": "P68988" }, { "db_name": "UniProt", "db_id": "P68989" }, { "db_name": "UniProt", "db_id": "P68990" }, { "db_name": "UniProt", "db_id": "P68991" }, { "db_name": "UniProt", "db_id": "P68992" }, { "db_name": "UniProt", "db_id": "P69046" }, { "db_name": "UniProt", "db_id": "P69047" }, { "db_name": "UniProt", "db_id": "P69048" }, { "db_name": "UniProt", "db_id": "P81423" }, { "db_name": "UniProt", "db_id": "P81881" }, { "db_name": "UniProt", "db_id": "Q9TQY7" } ] } ]
[]
[]
[ { "id": "DS.d6.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d6.s0.e0", "arg2_id": "DS.d6.s0.e1", "normalized": [] } ]
DS.d7
17719144
[ { "id": "DS.d7.s0", "type": "", "text": [ "The scavenger receptor, class B, type I (SR-BI) is critical in maintaining the homeostasis of cholesterol and alpha-tocopherol." ], "offsets": [ [ 0, 127 ] ] }, { "id": "DS.d7.s1", "type": "", "text": [ "SR-BI binds high-density lipoproteins (HDL) and mediates the selective transfer of cholesteryl esters and alpha-tocopherol from circulating HDL to cells." ], "offsets": [ [ 128, 281 ] ] }, { "id": "DS.d7.s2", "type": "", "text": [ "Thus, SR-BI influences neural and cognitive processes, a finding that highlights the contribution of cholesterol and alpha-tocopherol homeostasis in proper cognitive function." ], "offsets": [ [ 282, 457 ] ] } ]
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[]
[]
[ { "id": "DS.d7.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d7.s0.e3", "arg2_id": "DS.d7.s0.e1", "normalized": [] }, { "id": "DS.d7.s0.i2", "type": "compound-protein-interaction", "arg1_id": "DS.d7.s0.e2", "arg2_id": "DS.d7.s0.e1", "normalized": [] }, { "id": "DS.d7.s1.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d7.s1.e2", "arg2_id": "DS.d7.s1.e0", "normalized": [] } ]
DS.d8
17768029
[ { "id": "DS.d8.s0", "type": "", "text": [ "Alloxan is believed to confer its diabetogenic effect by inhibiting pancreatic glucokinase activity, leading to pancreatic beta-cell death." ], "offsets": [ [ 0, 139 ] ] } ]
[ { "id": "DS.d8.s0.e0", "type": "compound", "text": [ "Alloxan" ], "offsets": [ [ 0, 7 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5781" } ] }, { "id": "DS.d8.s0.e1", "type": "protein", "text": [ "glucokinase" ], "offsets": [ [ 79, 90 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O25731" }, { "db_name": "UniProt", "db_id": "P0A4E1" }, { "db_name": "UniProt", "db_id": "P0A4E2" }, { "db_name": "UniProt", "db_id": "P0A6V8" }, { "db_name": "UniProt", "db_id": "P0A6V9" }, { "db_name": "UniProt", "db_id": "P17712" }, { "db_name": "UniProt", "db_id": "P21908" }, { "db_name": "UniProt", "db_id": "P35557" }, { "db_name": "UniProt", "db_id": "P52792" }, { "db_name": "UniProt", "db_id": "P54495" }, { "db_name": "UniProt", "db_id": "P58616" }, { "db_name": "UniProt", "db_id": "P58617" }, { "db_name": "UniProt", "db_id": "P58618" }, { "db_name": "UniProt", "db_id": "P58619" }, { "db_name": "UniProt", "db_id": "P64253" }, { "db_name": "UniProt", "db_id": "P64254" }, { "db_name": "UniProt", "db_id": "P82680" }, { "db_name": "UniProt", "db_id": "Q55855" }, { "db_name": "UniProt", "db_id": "Q56198" }, { "db_name": "UniProt", "db_id": "Q59171" }, { "db_name": "UniProt", "db_id": "Q668N7" }, { "db_name": "UniProt", "db_id": "Q6D7C4" }, { "db_name": "UniProt", "db_id": "Q7N6Y0" }, { "db_name": "UniProt", "db_id": "Q83K86" }, { "db_name": "UniProt", "db_id": "Q87EG6" }, { "db_name": "UniProt", "db_id": "Q8FFD4" }, { "db_name": "UniProt", "db_id": "Q8FV09" }, { "db_name": "UniProt", "db_id": "Q8P8U7" }, { "db_name": "UniProt", "db_id": "Q8PKU2" }, { "db_name": "UniProt", "db_id": "Q8UIV7" }, { "db_name": "UniProt", "db_id": "Q8YDC6" }, { "db_name": "UniProt", "db_id": "Q92407" }, { "db_name": "UniProt", "db_id": "Q92T27" }, { "db_name": "UniProt", "db_id": "Q93IM5" }, { "db_name": "UniProt", "db_id": "Q98DM2" }, { "db_name": "UniProt", "db_id": "Q9A6N3" }, { "db_name": "UniProt", "db_id": "Q9HZ46" }, { "db_name": "UniProt", "db_id": "Q9KCZ4" }, { "db_name": "UniProt", "db_id": "Q9PEG4" }, { "db_name": "UniProt", "db_id": "Q9ZKB0" } ] } ]
[]
[]
[ { "id": "DS.d8.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d8.s0.e0", "arg2_id": "DS.d8.s0.e1", "normalized": [] } ]
DS.d9
17882129
[ { "id": "DS.d9.s0", "type": "", "text": [ "Alpha-tocopherol supplementation prevents the exercise-induced reduction of serum paraoxonase 1/arylesterase activities in healthy individuals." ], "offsets": [ [ 0, 143 ] ] } ]
[ { "id": "DS.d9.s0.e0", "type": "compound", "text": [ "Alpha-tocopherol" ], "offsets": [ [ 0, 16 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "2116" }, { "db_name": "PubChem", "db_id": "14985" } ] }, { "id": "DS.d9.s0.e1", "type": "protein", "text": [ "arylesterase" ], "offsets": [ [ 96, 108 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P22862" } ] } ]
[]
[]
[ { "id": "DS.d9.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d9.s0.e0", "arg2_id": "DS.d9.s0.e1", "normalized": [] } ]
DS.d10
17888544
[ { "id": "DS.d10.s0", "type": "", "text": [ "Although ApoE4 has been repeatedly associated with altered sphingomyelin and cholesterol levels in tissue culture and rodent models, there has not been a direct quantification of sphingomyelin or sterol levels in the brains of patients with different forms of ApoE." ], "offsets": [ [ 0, 265 ] ] } ]
[ { "id": "DS.d10.s0.e0", "type": "compound", "text": [ "cholesterol" ], "offsets": [ [ 77, 88 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "304" }, { "db_name": "PubChem", "db_id": "5997" }, { "db_name": "PubChem", "db_id": "6432564" }, { "db_name": "PubChem", "db_id": "11025495" } ] }, { "id": "DS.d10.s0.e1", "type": "protein", "text": [ "ApoE" ], "offsets": [ [ 9, 13 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P02649" }, { "db_name": "UniProt", "db_id": "P02650" }, { "db_name": "UniProt", "db_id": "P05770" }, { "db_name": "UniProt", "db_id": "P08226" }, { "db_name": "UniProt", "db_id": "P10517" }, { "db_name": "UniProt", "db_id": "P18287" }, { "db_name": "UniProt", "db_id": "P18649" }, { "db_name": "UniProt", "db_id": "P18650" }, { "db_name": "UniProt", "db_id": "P23529" }, { "db_name": "UniProt", "db_id": "Q03247" }, { "db_name": "UniProt", "db_id": "Q28502" }, { "db_name": "UniProt", "db_id": "Q28995" }, { "db_name": "UniProt", "db_id": "Q7M2U7" }, { "db_name": "UniProt", "db_id": "Q7M2U8" }, { "db_name": "UniProt", "db_id": "Q9GJU3" }, { "db_name": "UniProt", "db_id": "Q9GLC0" }, { "db_name": "UniProt", "db_id": "Q9GLM6" }, { "db_name": "UniProt", "db_id": "Q9GLM7" }, { "db_name": "UniProt", "db_id": "Q9GLM8" } ] } ]
[]
[]
[ { "id": "DS.d10.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d10.s0.e0", "arg2_id": "DS.d10.s0.e1", "normalized": [] } ]
DS.d11
17888546
[ { "id": "DS.d11.s0", "type": "", "text": [ "ApoE modified the association between cholesterol and cognitive decline, and the association between the ratio of 27-hydroxycholesterol to cholesterol and cognitive functioning." ], "offsets": [ [ 0, 177 ] ] } ]
[ { "id": "DS.d11.s0.e0", "type": "protein", "text": [ "ApoE" ], "offsets": [ [ 0, 4 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P02649" }, { "db_name": "UniProt", "db_id": "P02650" }, { "db_name": "UniProt", "db_id": "P05770" }, { "db_name": "UniProt", "db_id": "P08226" }, { "db_name": "UniProt", "db_id": "P10517" }, { "db_name": "UniProt", "db_id": "P18287" }, { "db_name": "UniProt", "db_id": "P18649" }, { "db_name": "UniProt", "db_id": "P18650" }, { "db_name": "UniProt", "db_id": "P23529" }, { "db_name": "UniProt", "db_id": "Q03247" }, { "db_name": "UniProt", "db_id": "Q28502" }, { "db_name": "UniProt", "db_id": "Q28995" }, { "db_name": "UniProt", "db_id": "Q7M2U7" }, { "db_name": "UniProt", "db_id": "Q7M2U8" }, { "db_name": "UniProt", "db_id": "Q9GJU3" }, { "db_name": "UniProt", "db_id": "Q9GLC0" }, { "db_name": "UniProt", "db_id": "Q9GLM6" }, { "db_name": "UniProt", "db_id": "Q9GLM7" }, { "db_name": "UniProt", "db_id": "Q9GLM8" } ] }, { "id": "DS.d11.s0.e1", "type": "compound", "text": [ "cholesterol" ], "offsets": [ [ 38, 49 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "304" }, { "db_name": "PubChem", "db_id": "5997" }, { "db_name": "PubChem", "db_id": "6432564" }, { "db_name": "PubChem", "db_id": "11025495" } ] }, { "id": "DS.d11.s0.e2", "type": "compound", "text": [ "27-hydroxycholesterol" ], "offsets": [ [ 114, 135 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "99470" }, { "db_name": "PubChem", "db_id": "123976" }, { "db_name": "PubChem", "db_id": "50990021" } ] }, { "id": "DS.d11.s0.e3", "type": "compound", "text": [ "cholesterol" ], "offsets": [ [ 124, 135 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "304" }, { "db_name": "PubChem", "db_id": "5997" }, { "db_name": "PubChem", "db_id": "6432564" }, { "db_name": "PubChem", "db_id": "11025495" } ] } ]
[]
[]
[ { "id": "DS.d11.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d11.s0.e2", "arg2_id": "DS.d11.s0.e0", "normalized": [] }, { "id": "DS.d11.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d11.s0.e1", "arg2_id": "DS.d11.s0.e0", "normalized": [] } ]
DS.d12
17890844
[ { "id": "DS.d12.s0", "type": "", "text": [ "Here we show that during growth in media containing glucose and in complex medium without glucose RamB activates expression of the aceE gene, encoding the E1p subunit of the pyruvate dehydrogenase complex." ], "offsets": [ [ 0, 205 ] ] } ]
[ { "id": "DS.d12.s0.e0", "type": "compound", "text": [ "glucose" ], "offsets": [ [ 52, 59 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "206" }, { "db_name": "PubChem", "db_id": "5793" }, { "db_name": "PubChem", "db_id": "64689" }, { "db_name": "PubChem", "db_id": "79025" } ] }, { "id": "DS.d12.s0.e1", "type": "compound", "text": [ "glucose" ], "offsets": [ [ 90, 97 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "206" }, { "db_name": "PubChem", "db_id": "5793" }, { "db_name": "PubChem", "db_id": "64689" }, { "db_name": "PubChem", "db_id": "79025" } ] }, { "id": "DS.d12.s0.e2", "type": "protein", "text": [ "aceE" ], "offsets": [ [ 131, 135 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P0AFG8" }, { "db_name": "UniProt", "db_id": "P0AFG9" }, { "db_name": "UniProt", "db_id": "P45119" }, { "db_name": "UniProt", "db_id": "P57301" }, { "db_name": "UniProt", "db_id": "Q10504" }, { "db_name": "UniProt", "db_id": "Q59637" }, { "db_name": "UniProt", "db_id": "Q89AR0" }, { "db_name": "UniProt", "db_id": "Q8K9T9" } ] } ]
[]
[]
[]
DS.d13
17925795
[ { "id": "DS.d13.s0", "type": "", "text": [ "The mood stabilizers lithium and valproate selectively activate the promoter IV of brain-derived neurotrophic factor in neurons." ], "offsets": [ [ 0, 128 ] ] }, { "id": "DS.d13.s1", "type": "", "text": [ "Treatment of cultured rat cortical neurons with therapeutic concentrations of LiCl or VPA selectively increased the levels of exon IV (formerly rat exon III)-containing BDNF mRNA, and the activity of BDNF promoter IV." ], "offsets": [ [ 129, 346 ] ] }, { "id": "DS.d13.s2", "type": "", "text": [ "We showed that lithium-induced activation of promoter IV was mimicked by pharmacological inhibition of GSK-3 or short interfering RNA (siRNA)-mediated gene silencing of GSK-3alpha or GSK-3beta isoforms." ], "offsets": [ [ 347, 549 ] ] }, { "id": "DS.d13.s3", "type": "", "text": [ "Furthermore, treatment with other HDAC inhibitors, sodium butyrate and trichostatin A, or transfection with an HDAC1-specific siRNA also activated BDNF promoter IV." ], "offsets": [ [ 550, 714 ] ] }, { "id": "DS.d13.s4", "type": "", "text": [ "Our study demonstrates for the first time that GSK-3 and HDAC are respective initial targets for lithium and VPA to activate BDNF promoter IV, and that this BDNF induction involves a novel responsive region in promoter IV of the BDNF gene." ], "offsets": [ [ 715, 954 ] ] } ]
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"db_name": "UniProt", "db_id": "O18753" }, { "db_name": "UniProt", "db_id": "O18755" }, { "db_name": "UniProt", "db_id": "O70183" }, { "db_name": "UniProt", "db_id": "O97759" }, { "db_name": "UniProt", "db_id": "P14082" }, { "db_name": "UniProt", "db_id": "P21237" }, { "db_name": "UniProt", "db_id": "P23363" }, { "db_name": "UniProt", "db_id": "P23560" }, { "db_name": "UniProt", "db_id": "P25429" }, { "db_name": "UniProt", "db_id": "P25430" }, { "db_name": "UniProt", "db_id": "P25431" }, { "db_name": "UniProt", "db_id": "P25432" }, { "db_name": "UniProt", "db_id": "Q02193" }, { "db_name": "UniProt", "db_id": "Q06225" }, { "db_name": "UniProt", "db_id": "Q3SAT7" }, { "db_name": "UniProt", "db_id": "Q4L0Y3" }, { "db_name": "UniProt", "db_id": "Q5IS78" }, { "db_name": "UniProt", "db_id": "Q6LCI5" }, { "db_name": "UniProt", "db_id": "Q7YRB4" }, { "db_name": "UniProt", "db_id": "Q90322" }, { "db_name": "UniProt", "db_id": "Q95106" }, { "db_name": "UniProt", "db_id": "Q9TST3" } ] }, { "id": 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[]
[]
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DS.d14
17941873
[ { "id": "DS.d14.s0", "type": "", "text": [ "Addition of biphasic insulin aspart 30 to optimized metformin and pioglitazone treatment of type 2 diabetes mellitus: The ACTION Study (Achieving Control Through Insulin plus Oral ageNts)." ], "offsets": [ [ 0, 188 ] ] }, { "id": "DS.d14.s1", "type": "", "text": [ "Efficacy and safety of biphasic insulin aspart (BIAsp 30, 30% short-acting and 70% intermediate-acting insulin aspart) added to an optimized treatment of metformin and pioglitazone (met/pio) were compared with treatment with optimized met/pio in type 2 diabetes patients." ], "offsets": [ [ 189, 460 ] ] } ]
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}, { "db_name": "UniProt", "db_id": "P12703" }, { "db_name": "UniProt", "db_id": "P12704" }, { "db_name": "UniProt", "db_id": "P12708" }, { "db_name": "UniProt", "db_id": "P13190" }, { "db_name": "UniProt", "db_id": "P18109" }, { "db_name": "UniProt", "db_id": "P29335" }, { "db_name": "UniProt", "db_id": "P42633" }, { "db_name": "UniProt", "db_id": "P67968" }, { "db_name": "UniProt", "db_id": "P67969" }, { "db_name": "UniProt", "db_id": "P67971" }, { "db_name": "UniProt", "db_id": "P67973" }, { "db_name": "UniProt", "db_id": "P67974" }, { "db_name": "UniProt", "db_id": "P68243" }, { "db_name": "UniProt", "db_id": "P68245" }, { "db_name": "UniProt", "db_id": "P68987" }, { "db_name": "UniProt", "db_id": "P68988" }, { "db_name": "UniProt", "db_id": "P68989" }, { "db_name": "UniProt", "db_id": "P68990" }, { "db_name": "UniProt", "db_id": "P68991" }, { "db_name": "UniProt", "db_id": "P68992" }, { "db_name": "UniProt", "db_id": "P69046" }, { "db_name": "UniProt", "db_id": "P69047" }, { "db_name": "UniProt", "db_id": "P69048" }, { "db_name": "UniProt", "db_id": "P81423" }, { "db_name": "UniProt", "db_id": "P81881" }, { "db_name": "UniProt", "db_id": "Q9TQY7" } ] }, { "id": "DS.d14.s1.e2", "type": "compound", "text": [ "metformin" ], "offsets": [ [ 343, 352 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "4091" } ] }, { "id": "DS.d14.s1.e3", "type": "compound", "text": [ "pioglitazone" ], "offsets": [ [ 357, 369 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "4829" } ] } ]
[]
[]
[]
DS.d15
17943458
[ { "id": "DS.d15.s0", "type": "", "text": [ "N-acetylaspartic acid (NAA) is converted into aspartate and acetate by aspartoacylase." ], "offsets": [ [ 0, 86 ] ] } ]
[ { "id": "DS.d15.s0.e0", "type": "compound", "text": [ "N-acetylaspartic acid" ], "offsets": [ [ 0, 21 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "65065" } ] }, { "id": "DS.d15.s0.e1", "type": "compound", "text": [ "aspartate" ], "offsets": [ [ 46, 55 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5960" } ] }, { "id": "DS.d15.s0.e2", "type": "compound", "text": [ "acetate" ], "offsets": [ [ 60, 67 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "53627460" } ] }, { "id": "DS.d15.s0.e3", "type": "protein", "text": [ "aspartoacylase" ], "offsets": [ [ 71, 85 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P45381" }, { "db_name": "UniProt", "db_id": "P46446" }, { "db_name": "UniProt", "db_id": "Q60HH2" }, { "db_name": "UniProt", "db_id": "Q8R3P0" }, { "db_name": "UniProt", "db_id": "Q9R1T5" } ] } ]
[]
[]
[ { "id": "DS.d15.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d15.s0.e0", "arg2_id": "DS.d15.s0.e3", "normalized": [] }, { "id": "DS.d15.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d15.s0.e1", "arg2_id": "DS.d15.s0.e3", "normalized": [] }, { "id": "DS.d15.s0.i2", "type": "compound-protein-interaction", "arg1_id": "DS.d15.s0.e2", "arg2_id": "DS.d15.s0.e3", "normalized": [] } ]
DS.d16
17950491
[ { "id": "DS.d16.s0", "type": "", "text": [ "In addition, treatment with rosiglitazone increased interleukin-4 (IL-4) mRNA and reversed the age-related decrease in hippocampal IL-4 concentration." ], "offsets": [ [ 0, 150 ] ] } ]
[ { "id": "DS.d16.s0.e0", "type": "compound", "text": [ "rosiglitazone" ], "offsets": [ [ 28, 41 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "77999" } ] }, { "id": "DS.d16.s0.e1", "type": "protein", "text": [ "IL-4" ], "offsets": [ [ 67, 71 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O77762" }, { "db_name": "UniProt", "db_id": "P05112" }, { "db_name": "UniProt", "db_id": "P07750" }, { "db_name": "UniProt", "db_id": "P20096" }, { "db_name": "UniProt", "db_id": "P30367" }, { "db_name": "UniProt", "db_id": "P30368" }, { "db_name": "UniProt", "db_id": "P42202" }, { "db_name": "UniProt", "db_id": "P46652" }, { "db_name": "UniProt", "db_id": "P47966" }, { "db_name": "UniProt", "db_id": "P51492" }, { "db_name": "UniProt", "db_id": "P51744" }, { "db_name": "UniProt", "db_id": "P55030" }, { "db_name": "UniProt", "db_id": "P79155" }, { "db_name": "UniProt", "db_id": "P79339" }, { "db_name": "UniProt", "db_id": "Q04745" }, { "db_name": "UniProt", "db_id": "Q2PE74" }, { "db_name": "UniProt", "db_id": "Q3S4V6" }, { "db_name": "UniProt", "db_id": "Q58M18" }, { "db_name": "UniProt", "db_id": "Q60440" }, { "db_name": "UniProt", "db_id": "Q7YS71" }, { "db_name": "UniProt", "db_id": "Q865X5" }, { "db_name": "UniProt", "db_id": "Q865Y0" }, { "db_name": "UniProt", "db_id": "Q8HYB1" }, { "db_name": "UniProt", "db_id": "Q9MZR8" }, { "db_name": "UniProt", "db_id": "Q9XS58" } ] }, { "id": "DS.d16.s0.e2", "type": "protein", "text": [ "IL-4" ], "offsets": [ [ 131, 135 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O77762" }, { "db_name": "UniProt", "db_id": "P05112" }, { "db_name": "UniProt", "db_id": "P07750" }, { "db_name": "UniProt", "db_id": "P20096" }, { "db_name": "UniProt", "db_id": "P30367" }, { "db_name": "UniProt", "db_id": "P30368" }, { "db_name": "UniProt", "db_id": "P42202" }, { "db_name": "UniProt", "db_id": "P46652" }, { "db_name": "UniProt", "db_id": "P47966" }, { "db_name": "UniProt", "db_id": "P51492" }, { "db_name": "UniProt", "db_id": "P51744" }, { "db_name": "UniProt", "db_id": "P55030" }, { "db_name": "UniProt", "db_id": "P79155" }, { "db_name": "UniProt", "db_id": "P79339" }, { "db_name": "UniProt", "db_id": "Q04745" }, { "db_name": "UniProt", "db_id": "Q2PE74" }, { "db_name": "UniProt", "db_id": "Q3S4V6" }, { "db_name": "UniProt", "db_id": "Q58M18" }, { "db_name": "UniProt", "db_id": "Q60440" }, { "db_name": "UniProt", "db_id": "Q7YS71" }, { "db_name": "UniProt", "db_id": "Q865X5" }, { "db_name": "UniProt", "db_id": "Q865Y0" }, { "db_name": "UniProt", "db_id": "Q8HYB1" }, { "db_name": "UniProt", "db_id": "Q9MZR8" }, { "db_name": "UniProt", "db_id": "Q9XS58" } ] } ]
[]
[]
[ { "id": "DS.d16.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d16.s0.e0", "arg2_id": "DS.d16.s0.e1", "normalized": [] } ]
DS.d17
17965987
[ { "id": "DS.d17.s0", "type": "", "text": [ "Serum BDNF levels were increased and plasma levels of HVA and MHPG were decreased according to the recovery from the active phase of the disease." ], "offsets": [ [ 0, 145 ] ] }, { "id": "DS.d17.s1", "type": "", "text": [ "These results suggest that dysfunctions of catecholaminergic neurons and neurotrophic factors might exist in Sydenham's chorea, and the decreasing catecholamine activities in response to risperidone might be associated with the improvement of the disease." ], "offsets": [ [ 146, 401 ] ] } ]
[ { "id": "DS.d17.s0.e0", "type": "protein", "text": [ "BDNF" ], "offsets": [ [ 6, 10 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O18752" }, { "db_name": "UniProt", "db_id": "O18753" }, { "db_name": "UniProt", "db_id": "O18755" }, { "db_name": "UniProt", "db_id": "O70183" }, { "db_name": "UniProt", "db_id": "O97759" }, { "db_name": "UniProt", "db_id": "P14082" }, { "db_name": "UniProt", "db_id": "P21237" }, { "db_name": "UniProt", "db_id": "P23363" }, { "db_name": "UniProt", "db_id": "P23560" }, { "db_name": "UniProt", "db_id": "P25429" }, { "db_name": "UniProt", "db_id": "P25430" }, { "db_name": "UniProt", "db_id": "P25431" }, { "db_name": "UniProt", "db_id": "P25432" }, { "db_name": "UniProt", "db_id": "Q02193" }, { "db_name": "UniProt", "db_id": "Q06225" }, { "db_name": "UniProt", "db_id": "Q3SAT7" }, { "db_name": "UniProt", "db_id": "Q4L0Y3" }, { "db_name": "UniProt", "db_id": "Q5IS78" }, { "db_name": "UniProt", "db_id": "Q6LCI5" }, { "db_name": "UniProt", "db_id": "Q7YRB4" }, { "db_name": "UniProt", "db_id": "Q90322" }, { "db_name": "UniProt", "db_id": "Q95106" }, { "db_name": "UniProt", "db_id": "Q9TST3" } ] }, { "id": "DS.d17.s0.e1", "type": "compound", "text": [ "HVA" ], "offsets": [ [ 54, 57 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "1738" } ] }, { "id": "DS.d17.s0.e2", "type": "compound", "text": [ "MHPG" ], "offsets": [ [ 62, 66 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "10805" } ] }, { "id": "DS.d17.s1.e0", "type": "protein", "text": [ "neurotrophic factors" ], "offsets": [ [ 219, 239 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P18280" }, { "db_name": "UniProt", "db_id": "P20181" }, { "db_name": "UniProt", "db_id": "P20783" }, { "db_name": "UniProt", "db_id": "P25433" }, { "db_name": "UniProt", "db_id": "P25434" }, { "db_name": "UniProt", "db_id": "P25435" }, { "db_name": "UniProt", "db_id": "Q9TST2" } ] }, { "id": "DS.d17.s1.e1", "type": "compound", "text": [ "risperidone" ], "offsets": [ [ 333, 344 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5073" } ] } ]
[]
[]
[]
DS.d18
17968352
[ { "id": "DS.d18.s0", "type": "", "text": [ "Based on these validities we identified alterations in the Wolframin gene in the CA1 and amygdala regions, specifically in exposed PTSD-like rats, which were normalized after treatment with citalopram." ], "offsets": [ [ 0, 201 ] ] } ]
[ { "id": "DS.d18.s0.e0", "type": "protein", "text": [ "Wolframin" ], "offsets": [ [ 59, 68 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O76024" }, { "db_name": "UniProt", "db_id": "P56695" } ] }, { "id": "DS.d18.s0.e1", "type": "compound", "text": [ "citalopram" ], "offsets": [ [ 190, 200 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "2771" }, { "db_name": "PubChem", "db_id": "146570" } ] } ]
[]
[]
[ { "id": "DS.d18.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d18.s0.e1", "arg2_id": "DS.d18.s0.e0", "normalized": [] } ]
DS.d19
17968676
[ { "id": "DS.d19.s0", "type": "", "text": [ "Cyclooxygenase-2 (Cox-2) is a key enzyme in the conversion of arachidonic acid to prostaglandins that has been shown to have a particular importance in the progression of several malignancies including nasopharyngeal carcinoma (NPC)." ], "offsets": [ [ 0, 233 ] ] } ]
[ { "id": "DS.d19.s0.e0", "type": "protein", "text": [ "Cyclooxygenase-2" ], "offsets": [ [ 0, 16 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O02768" }, { "db_name": "UniProt", "db_id": "O19183" }, { "db_name": "UniProt", "db_id": "O62698" }, { "db_name": "UniProt", "db_id": "O62725" }, { "db_name": "UniProt", "db_id": "P27607" }, { "db_name": "UniProt", "db_id": "P35354" }, { "db_name": "UniProt", "db_id": "P35355" }, { "db_name": "UniProt", "db_id": "P70682" }, { "db_name": "UniProt", "db_id": "P79208" }, { "db_name": "UniProt", "db_id": "Q05769" } ] }, { "id": "DS.d19.s0.e1", "type": "protein", "text": [ "Cox-2" ], "offsets": [ [ 18, 23 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P00411" }, { "db_name": "UniProt", "db_id": "P24894" }, { "db_name": "UniProt", "db_id": "P35355" }, { "db_name": "UniProt", "db_id": "Q05769" }, { "db_name": "UniProt", "db_id": "Q8HEC3" }, { "db_name": "UniProt", "db_id": "Q8SEM9" } ] }, { "id": "DS.d19.s0.e2", "type": "compound", "text": [ "arachidonic acid" ], "offsets": [ [ 62, 78 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "444899" } ] } ]
[]
[]
[ { "id": "DS.d19.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d19.s0.e2", "arg2_id": "DS.d19.s0.e0", "normalized": [] }, { "id": "DS.d19.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d19.s0.e2", "arg2_id": "DS.d19.s0.e1", "normalized": [] } ]
DS.d20
17976762
[ { "id": "DS.d20.s0", "type": "", "text": [ "Other potential treatments discussed for possible use with long-acting insulin overdoses include incision and drainage of the injection site, glucagon, and octreotide." ], "offsets": [ [ 0, 167 ] ] } ]
[ { "id": "DS.d20.s0.e0", "type": "protein", "text": [ "insulin" ], "offsets": [ [ 71, 78 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P01314" }, { "db_name": "UniProt", "db_id": "P01316" }, { "db_name": "UniProt", "db_id": "P01319" }, { "db_name": "UniProt", "db_id": "P01320" }, { "db_name": "UniProt", "db_id": "P01324" }, { "db_name": "UniProt", "db_id": "P01328" }, { "db_name": "UniProt", "db_id": "P01330" }, { "db_name": "UniProt", "db_id": "P01331" }, { "db_name": "UniProt", "db_id": "P01334" }, { "db_name": "UniProt", "db_id": "P01336" }, { "db_name": "UniProt", "db_id": "P01340" }, { "db_name": "UniProt", "db_id": "P07453" }, { "db_name": "UniProt", "db_id": "P09476" }, { "db_name": "UniProt", "db_id": "P09477" }, { "db_name": "UniProt", "db_id": "P0C236" }, { "db_name": "UniProt", "db_id": "P12703" }, { "db_name": "UniProt", "db_id": "P12704" }, { "db_name": "UniProt", "db_id": "P12708" }, { "db_name": "UniProt", "db_id": "P13190" }, { "db_name": "UniProt", "db_id": "P18109" }, { "db_name": "UniProt", "db_id": "P29335" }, { "db_name": "UniProt", "db_id": "P42633" }, { "db_name": "UniProt", "db_id": "P67968" }, { "db_name": "UniProt", "db_id": "P67969" }, { "db_name": "UniProt", "db_id": "P67971" }, { "db_name": "UniProt", "db_id": "P67973" }, { "db_name": "UniProt", "db_id": "P67974" }, { "db_name": "UniProt", "db_id": "P68243" }, { "db_name": "UniProt", "db_id": "P68245" }, { "db_name": "UniProt", "db_id": "P68987" }, { "db_name": "UniProt", "db_id": "P68988" }, { "db_name": "UniProt", "db_id": "P68989" }, { "db_name": "UniProt", "db_id": "P68990" }, { "db_name": "UniProt", "db_id": "P68991" }, { "db_name": "UniProt", "db_id": "P68992" }, { "db_name": "UniProt", "db_id": "P69046" }, { "db_name": "UniProt", "db_id": "P69047" }, { "db_name": "UniProt", "db_id": "P69048" }, { "db_name": "UniProt", "db_id": "P81423" }, { "db_name": "UniProt", "db_id": "P81881" }, { "db_name": "UniProt", "db_id": "Q9TQY7" } ] }, { "id": "DS.d20.s0.e2", "type": "compound", "text": [ "octreotide" ], "offsets": [ [ 156, 166 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "383414" }, { "db_name": "PubChem", "db_id": "448601" } ] } ]
[]
[]
[]
DS.d21
18037312
[ { "id": "DS.d21.s0", "type": "", "text": [ "Cadmium inhalation induced: (1) a transient bronchial inflammation, dominated by neutrophils; (2) a neutrophilia of the blood that persisted for up to 4 weeks; (3) a transient increased bronchial reactivity, and (4) a significant increase in MMP-9 activity in the BALF." ], "offsets": [ [ 0, 269 ] ] } ]
[ { "id": "DS.d21.s0.e0", "type": "compound", "text": [ "Cadmium" ], "offsets": [ [ 0, 7 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "23973" } ] }, { "id": "DS.d21.s0.e1", "type": "protein", "text": [ "MMP-9" ], "offsets": [ [ 242, 247 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O18733" }, { "db_name": "UniProt", "db_id": "P14780" }, { "db_name": "UniProt", "db_id": "P41245" }, { "db_name": "UniProt", "db_id": "P41246" }, { "db_name": "UniProt", "db_id": "P50282" }, { "db_name": "UniProt", "db_id": "P52176" } ] } ]
[]
[]
[ { "id": "DS.d21.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d21.s0.e0", "arg2_id": "DS.d21.s0.e1", "normalized": [] } ]
DS.d22
18042181
[ { "id": "DS.d22.s0", "type": "", "text": [ "To assess whether follicle-stimulating hormone (FSH) and basic fibroblast growth factor (bFGF) modulate GSH production in Sertoli cells by regulating the expression of GCLC, GCLM and/or GR, we performed in vitro studies using rat Sertoli cells in primary culture." ], "offsets": [ [ 0, 263 ] ] }, { "id": "DS.d22.s1", "type": "", "text": [ "In conclusion, our results show that FSH and bFGF increase GSH levels in Sertoli cells through stimulation of the de novo synthesis and recycling by upregulating GCLM and GR expression respectively." ], "offsets": [ [ 264, 462 ] ] } ]
[ { "id": "DS.d22.s0.e0", "type": "protein", "text": [ "basic fibroblast growth factor" ], "offsets": [ [ 57, 87 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P03969" }, { "db_name": "UniProt", "db_id": "P09038" }, { "db_name": "UniProt", "db_id": "P12226" }, { "db_name": "UniProt", "db_id": "P13109" }, { "db_name": "UniProt", "db_id": "P15655" }, { "db_name": "UniProt", "db_id": "P20003" }, { "db_name": "UniProt", "db_id": "P48798" }, { "db_name": "UniProt", "db_id": "P48799" }, { "db_name": "UniProt", "db_id": "P48800" }, { "db_name": "UniProt", "db_id": "Q60487" } ] }, { "id": "DS.d22.s0.e1", "type": "compound", "text": [ "GSH" ], "offsets": [ [ 104, 107 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "124886" } ] }, { "id": "DS.d22.s0.e2", "type": "protein", "text": [ "GCLC" ], "offsets": [ [ 168, 172 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P48506" } ] }, { "id": "DS.d22.s0.e3", "type": "protein", "text": [ "GCLM" ], "offsets": [ [ 174, 178 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P48507" }, { "db_name": "UniProt", "db_id": "Q2T9Y6" } ] }, { "id": "DS.d22.s1.e0", "type": "compound", "text": [ "GSH" ], "offsets": [ [ 323, 326 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "124886" } ] }, { "id": "DS.d22.s1.e1", "type": "protein", "text": [ "GCLM" ], "offsets": [ [ 426, 430 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P48507" }, { "db_name": "UniProt", "db_id": "Q2T9Y6" } ] } ]
[]
[]
[]
DS.d23
18061671
[ { "id": "DS.d23.s0", "type": "", "text": [ "Compared to the control, both the stresses individually and in combination led to in reductions in growth, photosynthetic pigments, ascorbic acid, catalase (CAT) activity and yield, whereas a reverse trend was observed for flavonoids, thiols and proline contents, superoxide dismutase (SOD) and peroxidase (POD) activities, and LPO." ], "offsets": [ [ 0, 332 ] ] } ]
[ { "id": "DS.d23.s0.e0", "type": "compound", "text": [ "ascorbic acid" ], "offsets": [ [ 132, 145 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "54670067" }, { "db_name": "PubChem", "db_id": "54690394" } ] }, { "id": "DS.d23.s0.e1", "type": "protein", "text": [ "catalase" ], "offsets": [ [ 147, 155 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O24339" }, { "db_name": "UniProt", "db_id": "O52762" }, { "db_name": "UniProt", "db_id": "O62839" }, { "db_name": "UniProt", "db_id": "O68146" }, { "db_name": "UniProt", "db_id": "O77229" }, { "db_name": "UniProt", "db_id": "O93662" }, { "db_name": "UniProt", "db_id": "O97492" }, { "db_name": "UniProt", "db_id": "P00432" }, { "db_name": "UniProt", "db_id": "P04040" }, { "db_name": "UniProt", "db_id": "P04762" }, { "db_name": "UniProt", "db_id": "P07145" }, { "db_name": "UniProt", "db_id": "P0A323" }, { "db_name": "UniProt", "db_id": "P0A324" }, { "db_name": "UniProt", "db_id": "P0A325" }, { "db_name": "UniProt", "db_id": "P0A326" }, { "db_name": "UniProt", "db_id": "P0A327" }, { "db_name": "UniProt", "db_id": "P11934" }, { "db_name": "UniProt", "db_id": "P17336" }, { "db_name": "UniProt", "db_id": "P24168" }, { "db_name": "UniProt", "db_id": "P24270" }, { "db_name": "UniProt", "db_id": "P25890" }, { "db_name": "UniProt", "db_id": "P29422" }, { "db_name": "UniProt", "db_id": "P30265" }, { "db_name": "UniProt", "db_id": "P30266" }, { "db_name": "UniProt", "db_id": "P32290" }, { "db_name": "UniProt", "db_id": "P42321" }, { "db_name": "UniProt", "db_id": "P44390" }, { "db_name": "UniProt", "db_id": "P45737" }, { "db_name": "UniProt", "db_id": "P45739" }, { "db_name": "UniProt", "db_id": "P55304" }, { "db_name": "UniProt", "db_id": "P55306" }, { "db_name": "UniProt", "db_id": "P55310" }, { "db_name": "UniProt", "db_id": "P55311" }, { "db_name": "UniProt", "db_id": "P55313" }, { "db_name": "UniProt", "db_id": "P77872" }, { "db_name": "UniProt", "db_id": "P81138" }, { "db_name": "UniProt", "db_id": "P90682" }, { "db_name": "UniProt", "db_id": "Q27710" }, { "db_name": "UniProt", "db_id": "Q49XC1" }, { "db_name": "UniProt", "db_id": "Q4L643" }, { "db_name": "UniProt", "db_id": "Q59296" }, { "db_name": "UniProt", "db_id": "Q59337" }, { "db_name": "UniProt", "db_id": "Q59602" }, { "db_name": "UniProt", "db_id": "Q59714" }, { "db_name": "UniProt", "db_id": "Q5HG86" }, { "db_name": "UniProt", "db_id": "Q5HPK8" }, { "db_name": "UniProt", "db_id": "Q5RF10" }, { "db_name": "UniProt", "db_id": "Q64405" }, { "db_name": "UniProt", "db_id": "Q6G9M4" }, { "db_name": "UniProt", "db_id": "Q6GH72" }, { "db_name": "UniProt", "db_id": "Q7A5T2" }, { "db_name": "UniProt", "db_id": "Q8CPD0" }, { "db_name": "UniProt", "db_id": "Q8FWU0" }, { "db_name": "UniProt", "db_id": "Q8NWV5" }, { "db_name": "UniProt", "db_id": "Q8X1P0" }, { "db_name": "UniProt", "db_id": "Q8Y3P9" }, { "db_name": "UniProt", "db_id": "Q926X0" }, { "db_name": "UniProt", "db_id": "Q99UE2" }, { "db_name": "UniProt", "db_id": "Q9AXH0" }, { "db_name": "UniProt", "db_id": "Q9KW19" }, { "db_name": "UniProt", "db_id": "Q9L4S1" }, { "db_name": "UniProt", "db_id": "Q9M5L6" }, { "db_name": "UniProt", "db_id": "Q9PT92" }, { "db_name": "UniProt", "db_id": "Q9PWF7" }, { "db_name": "UniProt", "db_id": "Q9Z598" }, { "db_name": "UniProt", "db_id": "Q9ZKX5" }, { "db_name": "UniProt", "db_id": "Q9ZN99" } ] }, { "id": "DS.d23.s0.e2", "type": "protein", "text": [ "CAT" ], "offsets": [ [ 157, 160 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O62839" }, { "db_name": "UniProt", "db_id": "O97492" }, { "db_name": "UniProt", "db_id": "P00432" }, { "db_name": "UniProt", "db_id": "P00485" }, { "db_name": "UniProt", "db_id": "P00486" }, { "db_name": "UniProt", "db_id": "P00487" }, { "db_name": "UniProt", "db_id": "P04040" }, { "db_name": "UniProt", "db_id": "P06135" }, { "db_name": "UniProt", "db_id": "P07641" }, { "db_name": "UniProt", "db_id": "P11504" }, { "db_name": "UniProt", "db_id": "P20074" }, { "db_name": "UniProt", "db_id": "P22782" }, { "db_name": "UniProt", "db_id": "P25309" }, { "db_name": "UniProt", "db_id": "P25819" }, { "db_name": "UniProt", "db_id": "P26825" }, { "db_name": "UniProt", "db_id": "P26826" }, { "db_name": "UniProt", "db_id": "P32796" }, { "db_name": "UniProt", "db_id": "P36882" }, { "db_name": "UniProt", "db_id": "P36883" }, { "db_name": "UniProt", "db_id": "P43155" }, { "db_name": "UniProt", "db_id": "P47934" }, { "db_name": "UniProt", "db_id": "P49417" }, { "db_name": "UniProt", "db_id": "P52826" }, { "db_name": "UniProt", "db_id": "P58777" }, { "db_name": "UniProt", "db_id": "P62577" }, { "db_name": "UniProt", "db_id": "P62578" }, { "db_name": "UniProt", "db_id": "P62579" }, { "db_name": "UniProt", "db_id": "P62580" }, { "db_name": "UniProt", "db_id": "P90682" }, { "db_name": "UniProt", "db_id": "Q00614" }, { "db_name": "UniProt", "db_id": "Q02736" }, { "db_name": "UniProt", "db_id": "Q03058" }, { "db_name": "UniProt", "db_id": "Q5RF10" }, { "db_name": "UniProt", "db_id": "Q64405" }, { "db_name": "UniProt", "db_id": "Q704S8" }, { "db_name": "UniProt", "db_id": "Q9M5L6" }, { "db_name": "UniProt", "db_id": "Q9PWF7" } ] }, { "id": "DS.d23.s0.e3", "type": "compound", "text": [ "proline" ], "offsets": [ [ 246, 253 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "614" }, { "db_name": "PubChem", "db_id": "8988" }, { "db_name": "PubChem", "db_id": "145742" } ] }, { "id": "DS.d23.s0.e4", "type": "protein", "text": [ "superoxide dismutase" ], "offsets": [ [ 264, 284 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O50258" } ] }, { "id": "DS.d23.s0.e5", "type": "protein", "text": [ "SOD" ], "offsets": [ [ 286, 289 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O12933" }, { "db_name": "UniProt", "db_id": "O22668" }, { "db_name": "UniProt", "db_id": "O75007" }, { "db_name": "UniProt", "db_id": "P24705" }, { "db_name": "UniProt", "db_id": "P51547" }, { "db_name": "UniProt", "db_id": "P93258" }, { "db_name": "UniProt", "db_id": "Q01137" }, { "db_name": "UniProt", "db_id": "Q27666" }, { "db_name": "UniProt", "db_id": "Q9SM64" } ] }, { "id": "DS.d23.s0.e6", "type": "protein", "text": [ "peroxidase" ], "offsets": [ [ 295, 305 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P15984" }, { "db_name": "UniProt", "db_id": "P16147" }, { "db_name": "UniProt", "db_id": "P84714" } ] }, { "id": "DS.d23.s0.e7", "type": "protein", "text": [ "POD" ], "offsets": [ [ 307, 310 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P59097" }, { "db_name": "UniProt", "db_id": "P79076" }, { "db_name": "UniProt", "db_id": "Q5B2E9" }, { "db_name": "UniProt", "db_id": "Q5G234" }, { "db_name": "UniProt", "db_id": "Q6QWR1" }, { "db_name": "UniProt", "db_id": "Q6UG02" }, { "db_name": "UniProt", "db_id": "Q75ZP8" }, { "db_name": "UniProt", "db_id": "Q8J136" }, { "db_name": "UniProt", "db_id": "Q8J2V8" } ] }, { "id": "DS.d23.s0.e8", "type": "protein", "text": [ "LPO" ], "offsets": [ [ 328, 331 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P22079" }, { "db_name": "UniProt", "db_id": "P80025" } ] } ]
[]
[]
[]
DS.d24
18068270
[ { "id": "DS.d24.s0", "type": "", "text": [ "Selenium and aluminum levels were not associated to CSF Abeta42." ], "offsets": [ [ 0, 64 ] ] }, { "id": "DS.d24.s1", "type": "", "text": [ "In vitro, the degradation of synthetic Abeta substrate added to CSF was markedly accelerated by low levels (2microM) of exogenous zinc and copper." ], "offsets": [ [ 65, 211 ] ] } ]
[ { "id": "DS.d24.s0.e0", "type": "compound", "text": [ "aluminum" ], "offsets": [ [ 13, 21 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5359268" } ] }, { "id": "DS.d24.s0.e1", "type": "protein", "text": [ "CSF" ], "offsets": [ [ 52, 55 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O62757" }, { "db_name": "UniProt", "db_id": "P01587" }, { "db_name": "UniProt", "db_id": "P04141" }, { "db_name": "UniProt", "db_id": "P11052" }, { "db_name": "UniProt", "db_id": "P28773" }, { "db_name": "UniProt", "db_id": "P48749" }, { "db_name": "UniProt", "db_id": "P48750" }, { "db_name": "UniProt", "db_id": "P51748" }, { "db_name": "UniProt", "db_id": "Q0MUT8" }, { "db_name": "UniProt", "db_id": "Q29118" }, { "db_name": "UniProt", "db_id": "Q60481" } ] }, { "id": "DS.d24.s1.e0", "type": "protein", "text": [ "CSF" ], "offsets": [ [ 129, 132 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O62757" }, { "db_name": "UniProt", "db_id": "P01587" }, { "db_name": "UniProt", "db_id": "P04141" }, { "db_name": "UniProt", "db_id": "P11052" }, { "db_name": "UniProt", "db_id": "P28773" }, { "db_name": "UniProt", "db_id": "P48749" }, { "db_name": "UniProt", "db_id": "P48750" }, { "db_name": "UniProt", "db_id": "P51748" }, { "db_name": "UniProt", "db_id": "Q0MUT8" }, { "db_name": "UniProt", "db_id": "Q29118" }, { "db_name": "UniProt", "db_id": "Q60481" } ] }, { "id": "DS.d24.s1.e1", "type": "compound", "text": [ "copper" ], "offsets": [ [ 204, 210 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "23978" } ] } ]
[]
[]
[ { "id": "DS.d24.s1.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d24.s1.e1", "arg2_id": "DS.d24.s1.e0", "normalized": [] } ]
DS.d25
18068871
[ { "id": "DS.d25.s0", "type": "", "text": [ "Presenilin-1 mutation impairs cholinergic modulation of synaptic plasticity and suppresses NMDA currents in hippocampus slices." ], "offsets": [ [ 0, 127 ] ] }, { "id": "DS.d25.s1", "type": "", "text": [ "Similarly, mutant PS1 impairs the ability of the cholinesterase inhibitor phenserine to enhance LTP." ], "offsets": [ [ 128, 228 ] ] } ]
[ { "id": "DS.d25.s0.e0", "type": "protein", "text": [ "Presenilin-1" ], "offsets": [ [ 0, 12 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O12976" }, { "db_name": "UniProt", "db_id": "P49768" }, { "db_name": "UniProt", "db_id": "P49769" }, { "db_name": "UniProt", "db_id": "P79802" }, { "db_name": "UniProt", "db_id": "P97887" }, { "db_name": "UniProt", "db_id": "Q4JIM4" }, { "db_name": "UniProt", "db_id": "Q5R780" }, { "db_name": "UniProt", "db_id": "Q6RH31" }, { "db_name": "UniProt", "db_id": "Q8HXW5" }, { "db_name": "UniProt", "db_id": "Q9W6T7" }, { "db_name": "UniProt", "db_id": "Q9XT97" } ] }, { "id": "DS.d25.s0.e1", "type": "compound", "text": [ "NMDA" ], "offsets": [ [ 91, 95 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "22880" } ] }, { "id": "DS.d25.s1.e0", "type": "protein", "text": [ "PS1" ], "offsets": [ [ 146, 149 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P49768" }, { "db_name": "UniProt", "db_id": "P79802" }, { "db_name": "UniProt", "db_id": "Q8HXW5" }, { "db_name": "UniProt", "db_id": "Q9W6T7" } ] }, { "id": "DS.d25.s1.e1", "type": "compound", "text": [ "phenserine" ], "offsets": [ [ 202, 212 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "192706" }, { "db_name": "PubChem", "db_id": "9905831" }, { "db_name": "PubChem", "db_id": "10337156" } ] } ]
[]
[]
[ { "id": "DS.d25.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d25.s0.e1", "arg2_id": "DS.d25.s0.e0", "normalized": [] }, { "id": "DS.d25.s1.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d25.s1.e1", "arg2_id": "DS.d25.s1.e0", "normalized": [] } ]
DS.d26
18077014
[ { "id": "DS.d26.s0", "type": "", "text": [ "It was found that the expression of SSAT and ODC were upregulated after reperfusion and the concentrations of spermidine and spermine were significantly decreased, while putrescine concentration was significantly increased." ], "offsets": [ [ 0, 223 ] ] } ]
[ { "id": "DS.d26.s0.e0", "type": "protein", "text": [ "SSAT" ], "offsets": [ [ 36, 40 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P21673" }, { "db_name": "UniProt", "db_id": "P48026" }, { "db_name": "UniProt", "db_id": "P49431" }, { "db_name": "UniProt", "db_id": "Q01612" }, { "db_name": "UniProt", "db_id": "Q28999" }, { "db_name": "UniProt", "db_id": "Q3T0Q0" }, { "db_name": "UniProt", "db_id": "Q8AXL1" }, { "db_name": "UniProt", "db_id": "Q9JHW6" } ] }, { "id": "DS.d26.s0.e1", "type": "protein", "text": [ "ODC" ], "offsets": [ [ 45, 48 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O22616" }, { "db_name": "UniProt", "db_id": "P00860" }, { "db_name": "UniProt", "db_id": "P07805" }, { "db_name": "UniProt", "db_id": "P08432" }, { "db_name": "UniProt", "db_id": "P09057" }, { "db_name": "UniProt", "db_id": "P11926" }, { "db_name": "UniProt", "db_id": "P14019" }, { "db_name": "UniProt", "db_id": "P27116" }, { "db_name": "UniProt", "db_id": "P27117" }, { "db_name": "UniProt", "db_id": "P27118" }, { "db_name": "UniProt", "db_id": "P27119" }, { "db_name": "UniProt", "db_id": "P27121" }, { "db_name": "UniProt", "db_id": "P40807" }, { "db_name": "UniProt", "db_id": "P40808" }, { "db_name": "UniProt", "db_id": "P41931" }, { "db_name": "UniProt", "db_id": "P43099" }, { "db_name": "UniProt", "db_id": "P49725" }, { "db_name": "UniProt", "db_id": "P50134" }, { "db_name": "UniProt", "db_id": "P78599" }, { "db_name": "UniProt", "db_id": "Q5RFB7" }, { "db_name": "UniProt", "db_id": "Q8S3N2" }, { "db_name": "UniProt", "db_id": "Q92445" }, { "db_name": "UniProt", "db_id": "Q9BQT8" }, { "db_name": "UniProt", "db_id": "Q9UQW9" } ] }, { "id": "DS.d26.s0.e2", "type": "compound", "text": [ "spermidine" ], "offsets": [ [ 110, 120 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "1102" } ] }, { "id": "DS.d26.s0.e3", "type": "compound", "text": [ "spermine" ], "offsets": [ [ 125, 133 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "1103" } ] }, { "id": "DS.d26.s0.e4", "type": "compound", "text": [ "putrescine" ], "offsets": [ [ 170, 180 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "1045" } ] } ]
[]
[]
[ { "id": "DS.d26.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d26.s0.e3", "arg2_id": "DS.d26.s0.e1", "normalized": [] }, { "id": "DS.d26.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d26.s0.e4", "arg2_id": "DS.d26.s0.e0", "normalized": [] }, { "id": "DS.d26.s0.i2", "type": "compound-protein-interaction", "arg1_id": "DS.d26.s0.e3", "arg2_id": "DS.d26.s0.e0", "normalized": [] }, { "id": "DS.d26.s0.i3", "type": "compound-protein-interaction", "arg1_id": "DS.d26.s0.e4", "arg2_id": "DS.d26.s0.e1", "normalized": [] }, { "id": "DS.d26.s0.i4", "type": "compound-protein-interaction", "arg1_id": "DS.d26.s0.e2", "arg2_id": "DS.d26.s0.e0", "normalized": [] }, { "id": "DS.d26.s0.i5", "type": "compound-protein-interaction", "arg1_id": "DS.d26.s0.e2", "arg2_id": "DS.d26.s0.e1", "normalized": [] } ]
DS.d27
18079026
[ { "id": "DS.d27.s0", "type": "", "text": [ "In the present study, we investigated the effects of quetiapine on memory impairment and pathological changes in an amyloid precursor protein (APP)/presenilin-1 (PS-1) double transgenic mouse model of Alzheimer's disease (AD)." ], "offsets": [ [ 0, 226 ] ] }, { "id": "DS.d27.s1", "type": "", "text": [ "Quetiapine also decreased brain Abeta peptides, beta-secretase activity and expression, and the level of C99 (an APP C-terminal fragment following cleavage by beta-secretase) in the transgenic mice." ], "offsets": [ [ 227, 425 ] ] }, { "id": "DS.d27.s2", "type": "", "text": [ "Furthermore, quetiapine attenuated anxiety-like behavior, up-regulated cerebral Bcl-2 protein, and decreased cerebral nitrotyrosine in the transgenic mice." ], "offsets": [ [ 426, 581 ] ] } ]
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[]
[]
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DS.d28
18162361
[ { "id": "DS.d28.s0", "type": "", "text": [ "Rosuvastatin rapidly phosphorylated Akt and endothelial nitric oxide synthase (eNOS) in human endothelial cells." ], "offsets": [ [ 0, 112 ] ] }, { "id": "DS.d28.s1", "type": "", "text": [ "Our findings indicate that rosuvastatin protects endothelial cells from death with phosphorylation of Akt and eNOS." ], "offsets": [ [ 113, 228 ] ] } ]
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[]
[]
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DS.d29
18164165
[ { "id": "DS.d29.s0", "type": "", "text": [ "Superoxide dismutase and glutathione peroxidase antioxidant enzyme activities and malondialdehyde levels were found to be increased; however, beta-carotene, retinol, vitamin C, vitamin E, reduced glutathione, and albumin levels were observed to be significantly decreased." ], "offsets": [ [ 0, 272 ] ] } ]
[ { "id": "DS.d29.s0.e0", "type": "protein", "text": [ "Superoxide dismutase" ], "offsets": [ [ 0, 20 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O50258" } ] }, { "id": "DS.d29.s0.e1", "type": "protein", "text": [ "glutathione peroxidase" ], "offsets": [ [ 25, 47 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O32770" }, { "db_name": "UniProt", "db_id": "O59858" }, { "db_name": "UniProt", "db_id": "Q00277" }, { "db_name": "UniProt", "db_id": "Q9CFV1" } ] }, { "id": "DS.d29.s0.e2", "type": "compound", "text": [ "malondialdehyde" ], "offsets": [ [ 82, 97 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "10964" } ] }, { "id": "DS.d29.s0.e3", "type": "compound", "text": [ "beta-carotene" ], "offsets": [ [ 142, 155 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5280489" } ] }, { "id": "DS.d29.s0.e4", "type": "compound", "text": [ "retinol" ], "offsets": [ [ 157, 164 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "445354" } ] }, { "id": "DS.d29.s0.e5", "type": "compound", "text": [ "vitamin C" ], "offsets": [ [ 166, 175 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "54670067" } ] }, { "id": "DS.d29.s0.e6", "type": "compound", "text": [ "vitamin E" ], "offsets": [ [ 177, 186 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "2116" }, { "db_name": "PubChem", "db_id": "14985" }, { "db_name": "PubChem", "db_id": "1548900" }, { "db_name": "PubChem", "db_id": "1742129" } ] }, { "id": "DS.d29.s0.e7", "type": "compound", "text": [ "reduced glutathione" ], "offsets": [ [ 188, 207 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "124886" } ] } ]
[]
[]
[]
DS.d30
18172601
[ { "id": "DS.d30.s0", "type": "", "text": [ "Structure-function studies of nitrated SERCA2 in aging heart and skeletal muscle demonstrate stoichiometric nitration of vicinal tyrosines, Tyr (294) and Tyr (295), on the lumenal side of the membrane-spanning helix, M4, which correlates with partial inhibition of Ca(2+)-ATPase activity suggesting a possible regulatory function in down-regulating mitochondrial energy production and the associated generation of reactive oxygen/nitrogen species." ], "offsets": [ [ 0, 447 ] ] } ]
[ { "id": "DS.d30.s0.e0", "type": "protein", "text": [ "SERCA2" ], "offsets": [ [ 39, 45 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O46674" }, { "db_name": "UniProt", "db_id": "O55143" }, { "db_name": "UniProt", "db_id": "P11507" }, { "db_name": "UniProt", "db_id": "P11607" }, { "db_name": "UniProt", "db_id": "P16615" }, { "db_name": "UniProt", "db_id": "P20647" }, { "db_name": "UniProt", "db_id": "Q00779" }, { "db_name": "UniProt", "db_id": "Q03669" } ] }, { "id": "DS.d30.s0.e1", "type": "compound", "text": [ "M4" ], "offsets": [ [ 217, 219 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "16682741" } ] }, { "id": "DS.d30.s0.e2", "type": "compound", "text": [ "oxygen" ], "offsets": [ [ 423, 429 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "977" } ] }, { "id": "DS.d30.s0.e3", "type": "compound", "text": [ "nitrogen" ], "offsets": [ [ 430, 438 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "947" }, { "db_name": "PubChem", "db_id": "123329" } ] } ]
[]
[]
[]
DS.d31
18177531
[ { "id": "DS.d31.s0", "type": "", "text": [ "Carbon monoxide is an endogenous vasodilator gas produced by the enzyme heme oxygenase (HO)." ], "offsets": [ [ 0, 92 ] ] } ]
[ { "id": "DS.d31.s0.e0", "type": "compound", "text": [ "Carbon monoxide" ], "offsets": [ [ 0, 15 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "281" } ] }, { "id": "DS.d31.s0.e1", "type": "protein", "text": [ "heme oxygenase" ], "offsets": [ [ 72, 86 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O19998" }, { "db_name": "UniProt", "db_id": "O73688" }, { "db_name": "UniProt", "db_id": "O78497" }, { "db_name": "UniProt", "db_id": "P51271" }, { "db_name": "UniProt", "db_id": "P71119" } ] } ]
[]
[]
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DS.d32
18179560
[ { "id": "DS.d32.s0", "type": "", "text": [ "The long pentraxin 3 (PTX3) is a multifunctional soluble pattern recognition receptor, involved in several processes ranging from innate resistance and inflammation to clearance of apoptotic cells and organization of hyaluronic acid-rich extracellular matrices." ], "offsets": [ [ 0, 261 ] ] } ]
[ { "id": "DS.d32.s0.e0", "type": "protein", "text": [ "PTX3" ], "offsets": [ [ 22, 26 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O75364" }, { "db_name": "UniProt", "db_id": "P26022" } ] }, { "id": "DS.d32.s0.e1", "type": "compound", "text": [ "hyaluronic acid" ], "offsets": [ [ 217, 232 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "24759" }, { "db_name": "PubChem", "db_id": "453618" }, { "db_name": "PubChem", "db_id": "3084050" }, { "db_name": "PubChem", "db_id": "24728612" } ] } ]
[]
[]
[ { "id": "DS.d32.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d32.s0.e1", "arg2_id": "DS.d32.s0.e0", "normalized": [] } ]
DS.d33
18180755
[ { "id": "DS.d33.s0", "type": "", "text": [ "The FKBP5 gene product forms part of a complex with the glucocorticoid receptor and can modulate cortisol-binding affinity." ], "offsets": [ [ 0, 123 ] ] } ]
[ { "id": "DS.d33.s0.e0", "type": "protein", "text": [ "FKBP5" ], "offsets": [ [ 4, 9 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P0C1J7" }, { "db_name": "UniProt", "db_id": "Q13451" }, { "db_name": "UniProt", "db_id": "Q5RF88" }, { "db_name": "UniProt", "db_id": "Q95L05" }, { "db_name": "UniProt", "db_id": "Q9XSH5" }, { "db_name": "UniProt", "db_id": "Q9XSI2" }, { "db_name": "UniProt", "db_id": "Q9XT11" } ] }, { "id": "DS.d33.s0.e1", "type": "protein", "text": [ "glucocorticoid receptor" ], "offsets": [ [ 56, 79 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O13186" }, { "db_name": "UniProt", "db_id": "O46567" }, { "db_name": "UniProt", "db_id": "O73673" }, { "db_name": "UniProt", "db_id": "P04150" }, { "db_name": "UniProt", "db_id": "P06536" }, { "db_name": "UniProt", "db_id": "P06537" }, { "db_name": "UniProt", "db_id": "P35547" }, { "db_name": "UniProt", "db_id": "P49115" }, { "db_name": "UniProt", "db_id": "P49843" }, { "db_name": "UniProt", "db_id": "P49844" }, { "db_name": "UniProt", "db_id": "P59667" }, { "db_name": "UniProt", "db_id": "P79269" }, { "db_name": "UniProt", "db_id": "P79686" }, { "db_name": "UniProt", "db_id": "Q5R9P5" }, { "db_name": "UniProt", "db_id": "Q6XLJ0" }, { "db_name": "UniProt", "db_id": "Q95267" }, { "db_name": "UniProt", "db_id": "Q9N1U3" } ] }, { "id": "DS.d33.s0.e2", "type": "compound", "text": [ "cortisol" ], "offsets": [ [ 97, 105 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5754" } ] } ]
[]
[]
[ { "id": "DS.d33.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d33.s0.e2", "arg2_id": "DS.d33.s0.e0", "normalized": [] }, { "id": "DS.d33.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d33.s0.e2", "arg2_id": "DS.d33.s0.e1", "normalized": [] } ]
DS.d34
18190985
[ { "id": "DS.d34.s0", "type": "", "text": [ "Several studies have shown that epsilon 2 carriers have lower low-density lipoprotein and apo B levels and higher high-density lipoprotein cholesterol and apo A-I levels than epsilon 3 carriers." ], "offsets": [ [ 0, 194 ] ] } ]
[ { "id": "DS.d34.s0.e0", "type": "protein", "text": [ "epsilon" ], "offsets": [ [ 32, 39 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P05463" } ] }, { "id": "DS.d34.s0.e1", "type": "protein", "text": [ "high-density lipoprotein" ], "offsets": [ [ 114, 138 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P81182" } ] }, { "id": "DS.d34.s0.e2", "type": "compound", "text": [ "cholesterol" ], "offsets": [ [ 139, 150 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "304" }, { "db_name": "PubChem", "db_id": "5997" }, { "db_name": "PubChem", "db_id": "6432564" }, { "db_name": "PubChem", "db_id": "11025495" } ] }, { "id": "DS.d34.s0.e3", "type": "protein", "text": [ "epsilon" ], "offsets": [ [ 175, 182 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P05463" } ] } ]
[]
[]
[ { "id": "DS.d34.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d34.s0.e2", "arg2_id": "DS.d34.s0.e1", "normalized": [] }, { "id": "DS.d34.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d34.s0.e2", "arg2_id": "DS.d34.s0.e0", "normalized": [] } ]
DS.d35
18191451
[ { "id": "DS.d35.s0", "type": "", "text": [ "Toxicity and characterization of cholinesterase-inhibition induced by diisopropyl fluorophosphate in Artemia salina larvae." ], "offsets": [ [ 0, 123 ] ] } ]
[ { "id": "DS.d35.s0.e0", "type": "protein", "text": [ "cholinesterase" ], "offsets": [ [ 33, 47 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P32749" }, { "db_name": "UniProt", "db_id": "P32750" }, { "db_name": "UniProt", "db_id": "P32751" }, { "db_name": "UniProt", "db_id": "P32752" }, { "db_name": "UniProt", "db_id": "P32753" }, { "db_name": "UniProt", "db_id": "P81908" } ] }, { "id": "DS.d35.s0.e1", "type": "compound", "text": [ "diisopropyl fluorophosphate" ], "offsets": [ [ 70, 97 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5936" } ] } ]
[]
[]
[ { "id": "DS.d35.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d35.s0.e1", "arg2_id": "DS.d35.s0.e0", "normalized": [] } ]
DS.d36
18195714
[ { "id": "DS.d36.s0", "type": "", "text": [ "Lipopolysaccharide-induced depressive-like behavior is mediated by indoleamine 2,3-dioxygenase activation in mice." ], "offsets": [ [ 0, 114 ] ] }, { "id": "DS.d36.s1", "type": "", "text": [ "We report that peripheral administration of lipopolysaccharide (LPS) activates IDO and culminates in a distinct depressive-like behavioral syndrome, measured by increased duration of immobility in both the forced-swim and tail suspension tests." ], "offsets": [ [ 115, 359 ] ] }, { "id": "DS.d36.s2", "type": "", "text": [ "Administration of L-kynurenine, a metabolite of tryptophan that is generated by IDO, to naive mice dose dependently induces depressive-like behavior." ], "offsets": [ [ 360, 509 ] ] } ]
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[]
[]
[ { "id": "DS.d36.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d36.s0.e0", "arg2_id": "DS.d36.s0.e1", "normalized": [] }, { "id": "DS.d36.s1.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d36.s1.e0", "arg2_id": "DS.d36.s1.e1", "normalized": [] }, { "id": "DS.d36.s2.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d36.s2.e0", "arg2_id": "DS.d36.s2.e2", "normalized": [] }, { "id": "DS.d36.s2.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d36.s2.e1", "arg2_id": "DS.d36.s2.e2", "normalized": [] } ]
DS.d37
18198986
[ { "id": "DS.d37.s0", "type": "", "text": [ "Serum adipocyte fatty acid binding protein levels in patients with type 2 diabetes mellitus and obesity: the influence of fenofibrate treatment." ], "offsets": [ [ 0, 144 ] ] }, { "id": "DS.d37.s1", "type": "", "text": [ "Serum FABP levels were 2.5-fold higher in T2DM group relative to C and were not affected by fenofibrate treatment (C: 20.6+/-2.1 microg/l, T2DM before F: 55.6+/-5.7 microg/l, T2DM after F: 54.2+/-5.4 microg/l, p 0.0001 for C vs. T2DM before F)." ], "offsets": [ [ 145, 389 ] ] }, { "id": "DS.d37.s2", "type": "", "text": [ "FABP levels positively correlated with BMI, triglyceride levels, blood glucose, glycated hemoglobin, atherogenic index and insulin levels." ], "offsets": [ [ 390, 528 ] ] } ]
[ { "id": "DS.d37.s0.e0", "type": "protein", "text": [ "fatty acid binding protein" ], "offsets": [ [ 16, 42 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O42494" }, { "db_name": "UniProt", "db_id": "O45035" }, { "db_name": "UniProt", "db_id": "O76821" }, { "db_name": "UniProt", "db_id": "P80547" }, { "db_name": "UniProt", "db_id": "Q17284" }, { "db_name": "UniProt", "db_id": "Q8MUC1" }, { "db_name": "UniProt", "db_id": "Q9U5P1" } ] }, { "id": "DS.d37.s0.e1", "type": "compound", "text": [ "fenofibrate" ], "offsets": [ [ 122, 133 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "3339" } ] }, { "id": "DS.d37.s1.e0", "type": "protein", "text": [ "FABP" ], "offsets": [ [ 151, 155 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P80565" } ] }, { "id": "DS.d37.s1.e1", "type": "compound", "text": [ "fenofibrate" ], "offsets": [ [ 237, 248 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "3339" } ] }, { "id": "DS.d37.s2.e0", "type": "protein", "text": [ "FABP" ], "offsets": [ [ 390, 394 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P80565" } ] }, { "id": "DS.d37.s2.e1", "type": "compound", "text": [ "glucose" ], "offsets": [ [ 461, 468 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "206" }, { "db_name": "PubChem", "db_id": "5793" }, { "db_name": "PubChem", "db_id": "64689" }, { "db_name": "PubChem", "db_id": "79025" } ] }, { "id": "DS.d37.s2.e2", "type": "protein", "text": [ "hemoglobin" ], "offsets": [ [ 479, 489 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P15160" }, { "db_name": "UniProt", "db_id": "P17724" }, { "db_name": "UniProt", "db_id": "P73925" }, { "db_name": "UniProt", "db_id": "Q03459" } ] }, { "id": "DS.d37.s2.e3", "type": "protein", "text": [ "insulin" ], "offsets": [ [ 513, 520 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P01314" }, { "db_name": "UniProt", "db_id": "P01316" }, { "db_name": "UniProt", "db_id": "P01319" }, { "db_name": "UniProt", "db_id": "P01320" }, { "db_name": "UniProt", "db_id": "P01324" }, { "db_name": "UniProt", "db_id": "P01328" }, { "db_name": "UniProt", "db_id": "P01330" }, { "db_name": "UniProt", "db_id": "P01331" }, { "db_name": "UniProt", "db_id": "P01334" }, { "db_name": "UniProt", "db_id": "P01336" }, { "db_name": "UniProt", "db_id": "P01340" }, { "db_name": "UniProt", "db_id": "P07453" }, { "db_name": "UniProt", "db_id": "P09476" }, { "db_name": "UniProt", "db_id": "P09477" }, { "db_name": "UniProt", "db_id": "P0C236" }, { "db_name": "UniProt", "db_id": "P12703" }, { "db_name": "UniProt", "db_id": "P12704" }, { "db_name": "UniProt", "db_id": "P12708" }, { "db_name": "UniProt", "db_id": "P13190" }, { "db_name": "UniProt", "db_id": "P18109" }, { "db_name": "UniProt", "db_id": "P29335" }, { "db_name": "UniProt", "db_id": "P42633" }, { "db_name": "UniProt", "db_id": "P67968" }, { "db_name": "UniProt", "db_id": "P67969" }, { "db_name": "UniProt", "db_id": "P67971" }, { "db_name": "UniProt", "db_id": "P67973" }, { "db_name": "UniProt", "db_id": "P67974" }, { "db_name": "UniProt", "db_id": "P68243" }, { "db_name": "UniProt", "db_id": "P68245" }, { "db_name": "UniProt", "db_id": "P68987" }, { "db_name": "UniProt", "db_id": "P68988" }, { "db_name": "UniProt", "db_id": "P68989" }, { "db_name": "UniProt", "db_id": "P68990" }, { "db_name": "UniProt", "db_id": "P68991" }, { "db_name": "UniProt", "db_id": "P68992" }, { "db_name": "UniProt", "db_id": "P69046" }, { "db_name": "UniProt", "db_id": "P69047" }, { "db_name": "UniProt", "db_id": "P69048" }, { "db_name": "UniProt", "db_id": "P81423" }, { "db_name": "UniProt", "db_id": "P81881" }, { "db_name": "UniProt", "db_id": "Q9TQY7" } ] } ]
[]
[]
[ { "id": "DS.d37.s2.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d37.s2.e1", "arg2_id": "DS.d37.s2.e0", "normalized": [] } ]
DS.d38
18198997
[ { "id": "DS.d38.s0", "type": "", "text": [ "Butyrate enemas upregulate Muc genes expression but decrease adherent mucus thickness in mice colon." ], "offsets": [ [ 0, 100 ] ] }, { "id": "DS.d38.s1", "type": "", "text": [ "We demonstrated that butyrate stimulated the gene expression of both secreted (Muc2) and membrane-linked (Muc1, Muc3, Muc4) mucins." ], "offsets": [ [ 101, 232 ] ] }, { "id": "DS.d38.s2", "type": "", "text": [ "Butyrate especially induced a 6-fold increase in Muc2 gene expression in proximal colon." ], "offsets": [ [ 233, 321 ] ] }, { "id": "DS.d38.s3", "type": "", "text": [ "However, butyrate enemas did not modify the number of epithelial cells containing the protein Muc2, and caused a 2-fold decrease in the thickness of adherent mucus layer." ], "offsets": [ [ 322, 492 ] ] } ]
[ { "id": "DS.d38.s0.e0", "type": "compound", "text": [ "Butyrate" ], "offsets": [ [ 0, 8 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "264" } ] }, { "id": "DS.d38.s0.e1", "type": "protein", "text": [ "Muc" ], "offsets": [ [ 27, 30 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P0A9M0" } ] }, { "id": "DS.d38.s1.e0", "type": "compound", "text": [ "butyrate" ], "offsets": [ [ 122, 130 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "264" } ] }, { "id": "DS.d38.s1.e1", "type": "protein", "text": [ "Muc2" ], "offsets": [ [ 180, 184 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "Q62635" } ] }, { "id": "DS.d38.s1.e2", "type": "protein", "text": [ "Muc1" ], "offsets": [ [ 207, 211 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "Q02496" } ] }, { "id": "DS.d38.s2.e0", "type": "compound", "text": [ "Butyrate" ], "offsets": [ [ 233, 241 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "264" } ] }, { "id": "DS.d38.s2.e1", "type": "protein", "text": [ "Muc2" ], "offsets": [ [ 282, 286 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "Q62635" } ] }, { "id": "DS.d38.s3.e0", "type": "compound", "text": [ "butyrate" ], "offsets": [ [ 331, 339 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "264" } ] }, { "id": "DS.d38.s3.e1", "type": "protein", "text": [ "Muc2" ], "offsets": [ [ 416, 420 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "Q62635" } ] } ]
[]
[]
[ { "id": "DS.d38.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d38.s0.e0", "arg2_id": "DS.d38.s0.e1", "normalized": [] }, { "id": "DS.d38.s1.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d38.s1.e0", "arg2_id": "DS.d38.s1.e1", "normalized": [] }, { "id": "DS.d38.s1.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d38.s1.e0", "arg2_id": "DS.d38.s1.e2", "normalized": [] }, { "id": "DS.d38.s2.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d38.s2.e0", "arg2_id": "DS.d38.s2.e1", "normalized": [] } ]
DS.d39
18204887
[ { "id": "DS.d39.s0", "type": "", "text": [ "We examined the association of MTHFR C677T and A1298C, and changes in plasma homocysteine in 352 Tunisian patients with angiographically-demonstrated CAD, and 390 age and gender-matched healthy subjects." ], "offsets": [ [ 0, 203 ] ] } ]
[ { "id": "DS.d39.s0.e0", "type": "protein", "text": [ "MTHFR" ], "offsets": [ [ 31, 36 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P42898" }, { "db_name": "UniProt", "db_id": "Q5I598" }, { "db_name": "UniProt", "db_id": "Q60HE5" } ] }, { "id": "DS.d39.s0.e1", "type": "compound", "text": [ "homocysteine" ], "offsets": [ [ 77, 89 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "778" } ] } ]
[]
[]
[]
DS.d40
18205042
[ { "id": "DS.d40.s0", "type": "", "text": [ "However, we also observed that clotrimazol (1alpha-hydroxylase inhibitor) enhanced 25(OH)D(3)-induced CYP24 expression in breast cancer cells." ], "offsets": [ [ 0, 142 ] ] } ]
[ { "id": "DS.d40.s0.e0", "type": "compound", "text": [ "clotrimazol" ], "offsets": [ [ 31, 42 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "2812" } ] }, { "id": "DS.d40.s0.e1", "type": "protein", "text": [ "CYP24" ], "offsets": [ [ 102, 107 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "Q07973" } ] } ]
[]
[]
[ { "id": "DS.d40.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d40.s0.e0", "arg2_id": "DS.d40.s0.e1", "normalized": [] } ]
DS.d41
18207583
[ { "id": "DS.d41.s0", "type": "", "text": [ "Expression of senescence-associated beta-galactosidase (SA-beta-Gal) by human skin fibroblasts, effect of advanced glycation end-products and fucose or rhamnose-rich polysaccharides." ], "offsets": [ [ 0, 182 ] ] } ]
[ { "id": "DS.d41.s0.e0", "type": "protein", "text": [ "beta-galactosidase" ], "offsets": [ [ 36, 54 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O33815" }, { "db_name": "UniProt", "db_id": "O52629" }, { "db_name": "UniProt", "db_id": "O52847" }, { "db_name": "UniProt", "db_id": "P00722" }, { "db_name": "UniProt", "db_id": "P00723" }, { "db_name": "UniProt", "db_id": "P06219" }, { "db_name": "UniProt", "db_id": "P0C1Y0" }, { "db_name": "UniProt", "db_id": "P14288" }, { "db_name": "UniProt", "db_id": "P22498" }, { "db_name": "UniProt", "db_id": "P23989" }, { "db_name": "UniProt", "db_id": "P24131" }, { "db_name": "UniProt", "db_id": "P26257" }, { "db_name": "UniProt", "db_id": "P30812" }, { "db_name": "UniProt", "db_id": "P50388" }, { "db_name": "UniProt", "db_id": "P70753" }, { "db_name": "UniProt", "db_id": "P77989" }, { "db_name": "UniProt", "db_id": "P81650" }, { "db_name": "UniProt", "db_id": "Q1G9Z4" }, { "db_name": "UniProt", "db_id": "Q47077" }, { "db_name": "UniProt", "db_id": "Q48727" }, { "db_name": "UniProt", "db_id": "Q56307" }, { "db_name": "UniProt", "db_id": "Q59140" }, { "db_name": "UniProt", "db_id": "Q59750" }, { "db_name": "UniProt", "db_id": "Q9K9C6" } ] }, { "id": "DS.d41.s0.e1", "type": "protein", "text": [ "Gal" ], "offsets": [ [ 64, 67 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P10683" }, { "db_name": "UniProt", "db_id": "P11886" }, { "db_name": "UniProt", "db_id": "P47212" } ] }, { "id": "DS.d41.s0.e2", "type": "compound", "text": [ "fucose" ], "offsets": [ [ 142, 148 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "840" }, { "db_name": "PubChem", "db_id": "17106" }, { "db_name": "PubChem", "db_id": "19466" }, { "db_name": "PubChem", "db_id": "94270" }, { "db_name": "PubChem", "db_id": "439554" } ] } ]
[]
[]
[]
DS.d42
18221806
[ { "id": "DS.d42.s0", "type": "", "text": [ "Short-term withdrawal of simvastatin induces endothelial dysfunction in patients with coronary artery disease: a dose-response effect dependent on endothelial nitric oxide synthase." ], "offsets": [ [ 0, 181 ] ] } ]
[ { "id": "DS.d42.s0.e0", "type": "compound", "text": [ "simvastatin" ], "offsets": [ [ 25, 36 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "54454" }, { "db_name": "PubChem", "db_id": "4677798" } ] }, { "id": "DS.d42.s0.e1", "type": "protein", "text": [ "nitric oxide synthase" ], "offsets": [ [ 159, 180 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O61309" }, { "db_name": "UniProt", "db_id": "O61608" }, { "db_name": "UniProt", "db_id": "Q27571" }, { "db_name": "UniProt", "db_id": "Q9I9M2" } ] } ]
[]
[]
[ { "id": "DS.d42.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d42.s0.e0", "arg2_id": "DS.d42.s0.e1", "normalized": [] } ]
DS.d43
18222028
[ { "id": "DS.d43.s0", "type": "", "text": [ "It has been shown that the removal efficiency of COD increased with the increasing applied current density and increasing PAC and Na (2)SO(4) dosage and the most effective removal capacity was achieved at the pH 7." ], "offsets": [ [ 0, 214 ] ] } ]
[ { "id": "DS.d43.s0.e0", "type": "protein", "text": [ "COD" ], "offsets": [ [ 49, 52 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P14678" } ] }, { "id": "DS.d43.s0.e1", "type": "compound", "text": [ "Na" ], "offsets": [ [ 130, 132 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "923" }, { "db_name": "PubChem", "db_id": "373840" } ] } ]
[]
[]
[ { "id": "DS.d43.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d43.s0.e1", "arg2_id": "DS.d43.s0.e0", "normalized": [] } ]
DS.d44
18222543
[ { "id": "DS.d44.s0", "type": "", "text": [ "The protective effects of novel synthetic organoselenium compounds (Se I and Se II) against DMBA-induced changes in levels of some (superoxide dismutase (SOD), catalase (CAT), glutathione peroxidase (GPx), and glutathione reductase (GR) activities and total glutathione (GSH), malonedialdehyde (MDA)) parameters in rat lung and kidney were investigated." ], "offsets": [ [ 0, 353 ] ] } ]
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[]
[]
[]
DS.d45
18226951
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"db_id": "Q97F85" }, { "db_name": "UniProt", "db_id": "Q97RN9" }, { "db_name": "UniProt", "db_id": "Q98A80" }, { "db_name": "UniProt", "db_id": "Q98PM0" }, { "db_name": "UniProt", "db_id": "Q99Z77" }, { "db_name": "UniProt", "db_id": "Q9CCQ4" }, { "db_name": "UniProt", "db_id": "Q9CEE0" }, { "db_name": "UniProt", "db_id": "Q9I5Z0" }, { "db_name": "UniProt", "db_id": "Q9JVV6" }, { "db_name": "UniProt", "db_id": "Q9JY09" }, { "db_name": "UniProt", "db_id": "Q9K5E4" }, { "db_name": "UniProt", "db_id": "Q9K7Q9" }, { "db_name": "UniProt", "db_id": "Q9KUP3" }, { "db_name": "UniProt", "db_id": "Q9L0Y3" }, { "db_name": "UniProt", "db_id": "Q9PGB0" }, { "db_name": "UniProt", "db_id": "Q9RL99" }, { "db_name": "UniProt", "db_id": "Q9RWM6" }, { "db_name": "UniProt", "db_id": "Q9X1Y8" }, { "db_name": "UniProt", "db_id": "Q9X4Q2" }, { "db_name": "UniProt", "db_id": "Q9ZMN5" } ] }, { "id": "DS.d45.s0.e3", "type": "protein", "text": [ "COMT" ], "offsets": [ [ 162, 166 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O23760" }, { "db_name": "UniProt", "db_id": "O81646" }, { "db_name": "UniProt", "db_id": "O82054" }, { "db_name": "UniProt", "db_id": "P21964" }, { "db_name": "UniProt", "db_id": "P28002" }, { "db_name": "UniProt", "db_id": "P46484" }, { "db_name": "UniProt", "db_id": "Q06509" }, { "db_name": "UniProt", "db_id": "Q06528" }, { "db_name": "UniProt", "db_id": "Q43239" }, { "db_name": "UniProt", "db_id": "Q43609" }, { "db_name": "UniProt", "db_id": "Q6ZD89" }, { "db_name": "UniProt", "db_id": "Q8GU25" }, { "db_name": "UniProt", "db_id": "Q8LL87" }, { "db_name": "UniProt", "db_id": "Q8W013" }, { "db_name": "UniProt", "db_id": "Q99028" }, { "db_name": "UniProt", "db_id": "Q9FQY8" }, { "db_name": "UniProt", "db_id": "Q9SWC2" } ] } ]
[]
[]
[]
DS.d46
18227836
[ { "id": "DS.d46.s0", "type": "", "text": [ "To test this hypothesis, we investigated whether disruption of the oxytocin gene (Oxt-/-) made mice more susceptible to the psychosis-related effects of amphetamine (Amp), apomorphine (Apo) and phencyclidine (PCP)." ], "offsets": [ [ 0, 214 ] ] } ]
[ { "id": "DS.d46.s0.e0", "type": "protein", "text": [ "oxytocin" ], "offsets": [ [ 67, 75 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P01175" }, { "db_name": "UniProt", "db_id": "P01176" }, { "db_name": "UniProt", "db_id": "P01177" }, { "db_name": "UniProt", "db_id": "P01178" }, { "db_name": "UniProt", "db_id": "P01179" }, { "db_name": "UniProt", "db_id": "P13389" }, { "db_name": "UniProt", "db_id": "P32005" }, { "db_name": "UniProt", "db_id": "P35454" }, { "db_name": "UniProt", "db_id": "P69043" }, { "db_name": "UniProt", "db_id": "P69044" }, { "db_name": "UniProt", "db_id": "P69056" }, { "db_name": "UniProt", "db_id": "P69057" }, { "db_name": "UniProt", "db_id": "P69058" } ] }, { "id": "DS.d46.s0.e1", "type": "protein", "text": [ "Oxt" ], "offsets": [ [ 82, 85 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P01179" }, { "db_name": "UniProt", "db_id": "P35454" }, { "db_name": "UniProt", "db_id": "Q5QQ53" }, { "db_name": "UniProt", "db_id": "Q7KVA1" } ] }, { "id": "DS.d46.s0.e2", "type": "compound", "text": [ "amphetamine" ], "offsets": [ [ 153, 164 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "3007" }, { "db_name": "PubChem", "db_id": "5826" }, { "db_name": "PubChem", "db_id": "32893" } ] }, { "id": "DS.d46.s0.e3", "type": "compound", "text": [ "Amp" ], "offsets": [ [ 166, 169 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "6083" } ] }, { "id": "DS.d46.s0.e4", "type": "compound", "text": [ "apomorphine" ], "offsets": [ [ 172, 183 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "6005" } ] }, { "id": "DS.d46.s0.e5", "type": "compound", "text": [ "phencyclidine" ], "offsets": [ [ 194, 207 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "6468" } ] } ]
[]
[]
[]
DS.d47
18227838
[ { "id": "DS.d47.s0", "type": "", "text": [ "The mood stabilizers lithium and valproate activate the ERK pathway in prefrontal cortex and hippocampus and potentiate ERK pathway-mediated neurite growth, neuronal survival and hippocampal neurogenesis." ], "offsets": [ [ 0, 204 ] ] } ]
[ { "id": "DS.d47.s0.e0", "type": "compound", "text": [ "lithium" ], "offsets": [ [ 21, 28 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "28486" }, { "db_name": "PubChem", "db_id": "3028194" } ] }, { "id": "DS.d47.s0.e1", "type": "compound", "text": [ "valproate" ], "offsets": [ [ 33, 42 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "3121" } ] }, { "id": "DS.d47.s0.e2", "type": "protein", "text": [ "ERK" ], "offsets": [ [ 56, 59 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P29323" } ] }, { "id": "DS.d47.s0.e3", "type": "protein", "text": [ "ERK" ], "offsets": [ [ 120, 123 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P29323" } ] } ]
[]
[]
[ { "id": "DS.d47.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d47.s0.e0", "arg2_id": "DS.d47.s0.e2", "normalized": [] }, { "id": "DS.d47.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d47.s0.e1", "arg2_id": "DS.d47.s0.e2", "normalized": [] } ]
DS.d48
18227970
[ { "id": "DS.d48.s0", "type": "", "text": [ "In the root soluble fraction, the suicide inhibitor alpha-difluoromethyl-lysine suppressed the activity of lysine decarboxylase and of ornithine decarboxylase to the same extent, but had no effect on arginine decarboxylase activity." ], "offsets": [ [ 0, 232 ] ] } ]
[ { "id": "DS.d48.s0.e0", "type": "compound", "text": [ "difluoromethyl" ], "offsets": [ [ 58, 72 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "137670" } ] }, { "id": "DS.d48.s0.e1", "type": "compound", "text": [ "lysine" ], "offsets": [ [ 73, 79 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "866" }, { "db_name": "PubChem", "db_id": "5962" } ] }, { "id": "DS.d48.s0.e2", "type": "protein", "text": [ "lysine decarboxylase" ], "offsets": [ [ 107, 127 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P05033" } ] }, { "id": "DS.d48.s0.e3", "type": "protein", "text": [ "ornithine decarboxylase" ], "offsets": [ [ 135, 158 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O22616" }, { "db_name": "UniProt", "db_id": "P00860" }, { "db_name": "UniProt", "db_id": "P07805" }, { "db_name": "UniProt", "db_id": "P08432" }, { "db_name": "UniProt", "db_id": "P09057" }, { "db_name": "UniProt", "db_id": "P11926" }, { "db_name": "UniProt", "db_id": "P14019" }, { "db_name": "UniProt", "db_id": "P27116" }, { "db_name": "UniProt", "db_id": "P27117" }, { "db_name": "UniProt", "db_id": "P27118" }, { "db_name": "UniProt", "db_id": "P27119" }, { "db_name": "UniProt", "db_id": "P27121" }, { "db_name": "UniProt", "db_id": "P41931" }, { "db_name": "UniProt", "db_id": "P44317" }, { "db_name": "UniProt", "db_id": "P49725" }, { "db_name": "UniProt", "db_id": "P50134" }, { "db_name": "UniProt", "db_id": "P78599" }, { "db_name": "UniProt", "db_id": "Q8S3N2" }, { "db_name": "UniProt", "db_id": "Q92445" }, { "db_name": "UniProt", "db_id": "Q9UQW9" } ] }, { "id": "DS.d48.s0.e4", "type": "protein", "text": [ "arginine decarboxylase" ], "offsets": [ [ 200, 222 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O81160" }, { "db_name": "UniProt", "db_id": "O82475" }, { "db_name": "UniProt", "db_id": "P21885" }, { "db_name": "UniProt", "db_id": "P22220" }, { "db_name": "UniProt", "db_id": "P49726" }, { "db_name": "UniProt", "db_id": "Q39827" }, { "db_name": "UniProt", "db_id": "Q43075" }, { "db_name": "UniProt", "db_id": "Q819L4" }, { "db_name": "UniProt", "db_id": "Q81MS2" }, { "db_name": "UniProt", "db_id": "Q96412" }, { "db_name": "UniProt", "db_id": "Q96A70" }, { "db_name": "UniProt", "db_id": "Q9K9K5" }, { "db_name": "UniProt", "db_id": "Q9SNN0" } ] } ]
[]
[]
[ { "id": "DS.d48.s0.i2", "type": "compound-protein-interaction", "arg1_id": "DS.d48.s0.e0", "arg2_id": "DS.d48.s0.e3", "normalized": [] }, { "id": "DS.d48.s0.i3", "type": "compound-protein-interaction", "arg1_id": "DS.d48.s0.e1", "arg2_id": "DS.d48.s0.e3", "normalized": [] }, { "id": "DS.d48.s0.i4", "type": "compound-protein-interaction", "arg1_id": "DS.d48.s0.e0", "arg2_id": "DS.d48.s0.e2", "normalized": [] }, { "id": "DS.d48.s0.i5", "type": "compound-protein-interaction", "arg1_id": "DS.d48.s0.e1", "arg2_id": "DS.d48.s0.e2", "normalized": [] } ]
DS.d49
18228136
[ { "id": "DS.d49.s0", "type": "", "text": [ "RT(2) Profiler PCR Array was used to identify differentially expressed genes in Dox and/or 2ME treatment groups, based on significance of results 4 genes were selected: MDR1, Bcl2, P53 and Cyclin D1." ], "offsets": [ [ 0, 199 ] ] }, { "id": "DS.d49.s1", "type": "", "text": [ "The array and western blotting showed that Bcl2 and Cyclin D1 expression were down regulated; P53 expression was not affected while MDR1 was over expressed by combination of 2ME with Dox." ], "offsets": [ [ 200, 387 ] ] }, { "id": "DS.d49.s2", "type": "", "text": [ "In conclusion, 2ME chemosensitizes resistant breast cancer cells to Dox cytotoxicity by down regulating expression of Bcl2 and Cyclin D1, augmenting caspase 3 activity as well as inducing cell cycle block in G(1) and S phases." ], "offsets": [ [ 388, 614 ] ] } ]
[ { "id": "DS.d49.s0.e0", "type": "compound", "text": [ "2ME" ], "offsets": [ [ 91, 94 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "10903" } ] }, { "id": "DS.d49.s0.e1", "type": "protein", "text": [ "MDR1" ], "offsets": [ [ 169, 173 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P08183" }, { "db_name": "UniProt", "db_id": "P13568" }, { "db_name": "UniProt", "db_id": "P16875" }, { "db_name": "UniProt", "db_id": "P28873" }, { "db_name": "UniProt", "db_id": "P53258" }, { "db_name": "UniProt", "db_id": "Q06034" }, { "db_name": "UniProt", "db_id": "Q9LJX0" }, { "db_name": "UniProt", "db_id": "Q9ZR72" } ] }, { "id": "DS.d49.s0.e2", "type": "protein", "text": [ "Bcl2" ], "offsets": [ [ 175, 179 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P10417" }, { "db_name": "UniProt", "db_id": "P49950" } ] }, { "id": "DS.d49.s0.e3", "type": "protein", "text": [ "P53" ], "offsets": [ [ 181, 184 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O09185" }, { "db_name": "UniProt", "db_id": "O12946" }, { "db_name": "UniProt", "db_id": "O57538" }, { "db_name": "UniProt", "db_id": "O93379" }, { "db_name": "UniProt", "db_id": "P02340" }, { "db_name": "UniProt", "db_id": "P04637" }, { "db_name": "UniProt", "db_id": "P10361" }, { "db_name": "UniProt", "db_id": "P19558" }, { "db_name": "UniProt", "db_id": "P19559" }, { "db_name": "UniProt", "db_id": "P56423" }, { "db_name": "UniProt", "db_id": "P56424" }, { "db_name": "UniProt", "db_id": "P61260" }, { "db_name": "UniProt", "db_id": "P79820" }, { "db_name": "UniProt", "db_id": "P79892" }, { "db_name": "UniProt", "db_id": "Q29537" }, { "db_name": "UniProt", "db_id": "Q42578" }, { "db_name": "UniProt", "db_id": "Q8SPZ3" }, { "db_name": "UniProt", "db_id": "Q92143" }, { "db_name": "UniProt", "db_id": "Q9TTA1" }, { "db_name": "UniProt", "db_id": "Q9TUB2" }, { "db_name": "UniProt", "db_id": "Q9W678" }, { "db_name": "UniProt", "db_id": "Q9W679" } ] }, { "id": "DS.d49.s0.e4", "type": "protein", "text": [ "Cyclin" ], 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[]
[]
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DS.d50
18230627
[ { "id": "DS.d50.s0", "type": "", "text": [ "Randomised trials have demonstrated that the efficacy of anti-tumour necrosis factor (TNF) agents is significantly increased by concomitant methotrexate (MTX) in rheumatoid arthritis (RA)." ], "offsets": [ [ 0, 188 ] ] } ]
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[]
[]
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DS.d51
18243311
[ { "id": "DS.d51.s0", "type": "", "text": [ "Neither apyrase nor ATP altered production of reactive oxygen intermediates (ROI) or reactive nitrogen intermediates (RNI) by bovine monocytes." ], "offsets": [ [ 0, 143 ] ] } ]
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[]
[]
[]
DS.d52
18243368
[ { "id": "DS.d52.s0", "type": "", "text": [ "In this systematic review, we have analyzed the results of 52 clinical trials, including 72 intervention groups and 6290 patients, on vitamin D supplementation in order to evaluate the experimental evidence and the effects of age and chronic immobility on responses of parathyroid hormone (PTH)." ], "offsets": [ [ 0, 295 ] ] }, { "id": "DS.d52.s1", "type": "", "text": [ "The vitamin D supplementation of the chronically immobile patients resulted in a smaller decrease in PTH 0.001)." ], "offsets": [ [ 296, 408 ] ] }, { "id": "DS.d52.s2", "type": "", "text": [ "Our results also suggest that PTH decreases quite linearly during vitamin D supplementation at any given 25-OHD level." ], "offsets": [ [ 409, 527 ] ] } ]
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DS.d54
18249383
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DS.d55
18249399
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DS.d56
18253022
[ { "id": "DS.d56.s0", "type": "", "text": [ "Surprisingly, a deletion of the pilR gene affected not only insoluble Fe(III) reduction, which requires pili, but also soluble Fe(III) reduction, which, in contrast, does not require pili." ], "offsets": [ [ 0, 188 ] ] } ]
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[]
[]
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DS.d57
18253697
[ { "id": "DS.d57.s0", "type": "", "text": [ "Furthermore, the suppressive effects of P on cytochrome c release and caspase-9 and caspase-3 activation in serum-deprived MC3T3-E1 cells were also reversed by RU486." ], "offsets": [ [ 0, 166 ] ] } ]
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"db_name": "UniProt", "db_id": "P62895" }, { "db_name": "UniProt", "db_id": "P62896" }, { "db_name": "UniProt", "db_id": "P67881" }, { "db_name": "UniProt", "db_id": "P67882" }, { "db_name": "UniProt", "db_id": "P68096" }, { "db_name": "UniProt", "db_id": "P68097" }, { "db_name": "UniProt", "db_id": "P68098" }, { "db_name": "UniProt", "db_id": "P68099" }, { "db_name": "UniProt", "db_id": "P68100" }, { "db_name": "UniProt", "db_id": "P68517" }, { "db_name": "UniProt", "db_id": "P68518" }, { "db_name": "UniProt", "db_id": "P68519" }, { "db_name": "UniProt", "db_id": "P81280" }, { "db_name": "UniProt", "db_id": "P81459" }, { "db_name": "UniProt", "db_id": "P99998" }, { "db_name": "UniProt", "db_id": "P99999" }, { "db_name": "UniProt", "db_id": "Q41346" }, { "db_name": "UniProt", "db_id": "Q4HVX7" }, { "db_name": "UniProt", "db_id": "Q52V08" }, { "db_name": "UniProt", "db_id": "Q52V09" }, { "db_name": "UniProt", "db_id": "Q52V10" }, { "db_name": "UniProt", "db_id": "Q5RFH4" }, { "db_name": "UniProt", "db_id": "Q640U4" }, { "db_name": "UniProt", "db_id": "Q6C9Q0" }, { "db_name": "UniProt", "db_id": "Q6IQM2" }, { "db_name": "UniProt", "db_id": "Q6Q4H8" }, { "db_name": "UniProt", "db_id": "Q6QLW4" }, { "db_name": "UniProt", "db_id": "Q6WUX8" }, { "db_name": "UniProt", "db_id": "Q753F4" }, { "db_name": "UniProt", "db_id": "Q7YR71" }, { "db_name": "UniProt", "db_id": "Q96VP3" } ] }, { "id": "DS.d57.s0.e1", "type": "compound", "text": [ "RU486" ], "offsets": [ [ 160, 165 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "55245" } ] } ]
[]
[]
[ { "id": "DS.d57.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d57.s0.e1", "arg2_id": "DS.d57.s0.e0", "normalized": [] } ]
DS.d58
18256928
[ { "id": "DS.d58.s0", "type": "", "text": [ "Therapeutic metformin/AMPK activation promotes the angiogenic phenotype in the ERalpha negative MDA-MB-435 breast cancer model." ], "offsets": [ [ 0, 127 ] ] }, { "id": "DS.d58.s1", "type": "", "text": [ "However, when ERalpha negative MDA-MB-435 cells were treated with metformin, they demonstrated increased expression of vascular endothelial growth factor (VEGF) in an AMPK dependent manner; while the ERalpha positive MCF-7 cells did not." ], "offsets": [ [ 128, 365 ] ] }, { "id": "DS.d58.s2", "type": "", "text": [ "The metformin-treated group showed increased VEGF expression, intratumoral microvascular density and reduced necrosis." ], "offsets": [ [ 366, 484 ] ] }, { "id": "DS.d58.s3", "type": "", "text": [ "Metformin treatment was sufficient, however, to reduce systemic IGF-1 and the proliferation rate of tumor cells in vascularized regions." ], "offsets": [ [ 485, 621 ] ] } ]
[ { "id": "DS.d58.s0.e0", "type": "compound", "text": [ "metformin" ], "offsets": [ [ 12, 21 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "4091" } ] }, { "id": "DS.d58.s0.e1", "type": "protein", "text": [ "AMPK" ], "offsets": [ [ 22, 26 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P54646" }, { "db_name": "UniProt", "db_id": "Q09136" }, { "db_name": "UniProt", "db_id": "Q9Y478" } ] }, { "id": "DS.d58.s1.e0", "type": "compound", "text": [ "metformin" ], "offsets": [ [ 194, 203 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "4091" } ] }, { "id": "DS.d58.s1.e1", "type": "protein", "text": [ "VEGF" ], "offsets": [ [ 283, 287 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P15691" }, { "db_name": "UniProt", "db_id": "P15692" }, { "db_name": "UniProt", "db_id": "P26617" }, { "db_name": "UniProt", "db_id": "P49151" }, { "db_name": "UniProt", "db_id": "P50412" }, { "db_name": "UniProt", "db_id": "P67964" }, { "db_name": "UniProt", "db_id": "P67965" }, { "db_name": "UniProt", "db_id": "Q99PS1" }, { "db_name": "UniProt", "db_id": "Q9GKR0" }, { "db_name": "UniProt", "db_id": "Q9MYV3" } ] }, { "id": "DS.d58.s1.e2", "type": "protein", "text": [ "AMPK" ], "offsets": [ [ 295, 299 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P54646" }, { "db_name": "UniProt", "db_id": "Q09136" }, { "db_name": "UniProt", "db_id": "Q9Y478" } ] }, { "id": "DS.d58.s2.e0", "type": "compound", "text": [ "metformin" ], "offsets": [ [ 370, 379 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "4091" } ] }, { "id": "DS.d58.s2.e1", "type": "protein", "text": [ "VEGF" ], "offsets": [ [ 411, 415 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P15691" }, { "db_name": "UniProt", "db_id": "P15692" }, { "db_name": "UniProt", "db_id": "P26617" }, { "db_name": "UniProt", "db_id": "P49151" }, { "db_name": "UniProt", "db_id": "P50412" }, { "db_name": "UniProt", "db_id": "P67964" }, { "db_name": "UniProt", "db_id": "P67965" }, { "db_name": "UniProt", "db_id": "Q99PS1" }, { "db_name": "UniProt", "db_id": "Q9GKR0" }, { "db_name": "UniProt", "db_id": "Q9MYV3" } ] }, { "id": "DS.d58.s3.e0", "type": "compound", "text": [ "Metformin" ], "offsets": [ [ 485, 494 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "4091" } ] }, { "id": "DS.d58.s3.e1", "type": "protein", "text": [ "IGF-1" ], "offsets": [ [ 549, 554 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "Q95222" } ] } ]
[]
[]
[ { "id": "DS.d58.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d58.s0.e0", "arg2_id": "DS.d58.s0.e1", "normalized": [] }, { "id": "DS.d58.s1.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d58.s1.e0", "arg2_id": "DS.d58.s1.e2", "normalized": [] }, { "id": "DS.d58.s1.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d58.s1.e0", "arg2_id": "DS.d58.s1.e1", "normalized": [] }, { "id": "DS.d58.s2.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d58.s2.e0", "arg2_id": "DS.d58.s2.e1", "normalized": [] }, { "id": "DS.d58.s3.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d58.s3.e0", "arg2_id": "DS.d58.s3.e1", "normalized": [] } ]
DS.d59
18260130
[ { "id": "DS.d59.s0", "type": "", "text": [ "TNF-alpha, MCP-1, MIP-1alpha, IL-8, IL-6, IL-1beta, VEGF, IL-1ra, and IL-10 were measured from monocyte/macrophage cultures at different stages of activation and differentiation seeded onto polyethylene, polyurethane, expanded polytetrafluoroethylene, polymethyl methacrylate, and a hydrogel copolymer of 2-hydroxyethyl methacrylate, 1-vinyl-2-pyrrolidinone, and polyethylene glycol acrylate in tissue culture polystyrene (TCPS) plates." ], "offsets": [ [ 0, 436 ] ] } ]
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"UniProt", "db_id": "P28291" }, { "db_name": "UniProt", "db_id": "P28292" }, { "db_name": "UniProt", "db_id": "P42831" }, { "db_name": "UniProt", "db_id": "P52203" }, { "db_name": "UniProt", "db_id": "P61274" }, { "db_name": "UniProt", "db_id": "P61275" }, { "db_name": "UniProt", "db_id": "Q08782" }, { "db_name": "UniProt", "db_id": "Q9TTQ3" } ] }, { "id": "DS.d59.s0.e2", "type": "protein", "text": [ "MIP-1alpha" ], "offsets": [ [ 18, 28 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P10147" }, { "db_name": "UniProt", "db_id": "P10855" }, { "db_name": "UniProt", "db_id": "P50229" }, { "db_name": "UniProt", "db_id": "Q5I1Z0" }, { "db_name": "UniProt", "db_id": "Q8HYQ3" }, { "db_name": "UniProt", "db_id": "Q8SQA6" } ] }, { "id": "DS.d59.s0.e3", "type": "protein", "text": [ "IL-8" ], "offsets": [ [ 30, 34 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O62812" }, { "db_name": "UniProt", "db_id": "P08317" }, { "db_name": "UniProt", "db_id": "P10145" }, { "db_name": "UniProt", "db_id": "P19874" }, { "db_name": "UniProt", "db_id": "P26894" }, { "db_name": "UniProt", "db_id": "P36925" }, { "db_name": "UniProt", "db_id": "P41324" }, { "db_name": "UniProt", "db_id": "P46653" }, { "db_name": "UniProt", "db_id": "P49113" }, { "db_name": "UniProt", "db_id": "P67813" }, { "db_name": "UniProt", "db_id": "P67814" }, { "db_name": "UniProt", "db_id": "P79255" }, { "db_name": "UniProt", "db_id": "Q102R3" }, { "db_name": "UniProt", "db_id": "Q7YRB5" }, { "db_name": "UniProt", "db_id": "Q9XSX5" } ] }, { "id": "DS.d59.s0.e4", "type": "protein", "text": [ "IL-6" ], "offsets": [ [ 36, 40 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O35736" }, { "db_name": "UniProt", "db_id": "P05231" }, { "db_name": "UniProt", "db_id": "P08505" }, { "db_name": "UniProt", "db_id": "P20607" }, { "db_name": "UniProt", "db_id": "P26892" }, { "db_name": "UniProt", "db_id": "P26893" }, { "db_name": "UniProt", "db_id": "P29455" }, { "db_name": "UniProt", "db_id": "P41323" }, { "db_name": "UniProt", "db_id": "P41683" }, { "db_name": "UniProt", "db_id": "P41693" }, { "db_name": "UniProt", "db_id": "P46650" }, { "db_name": "UniProt", "db_id": "P51494" }, { "db_name": "UniProt", "db_id": "P79341" }, { "db_name": "UniProt", "db_id": "Q25BC2" }, { "db_name": "UniProt", "db_id": "Q28319" }, { "db_name": "UniProt", "db_id": "Q28747" }, { "db_name": "UniProt", "db_id": "Q28819" }, { "db_name": "UniProt", "db_id": "Q2MH06" }, { "db_name": "UniProt", "db_id": "Q5I6E3" }, { "db_name": "UniProt", "db_id": "Q6V919" }, { "db_name": "UniProt", "db_id": "Q865W7" }, { "db_name": "UniProt", "db_id": "Q865X6" }, { "db_name": "UniProt", "db_id": "Q8MKH0" }, { "db_name": "UniProt", "db_id": "Q95181" }, { "db_name": "UniProt", "db_id": "Q9MZR1" }, { "db_name": "UniProt", "db_id": "Q9XT80" } ] }, { "id": "DS.d59.s0.e5", "type": "protein", "text": [ "IL-1beta" ], "offsets": [ [ 42, 50 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P01584" }, { "db_name": "UniProt", "db_id": "P09428" }, { "db_name": "UniProt", "db_id": "P10749" }, { "db_name": "UniProt", "db_id": "P14628" }, { "db_name": "UniProt", "db_id": "P21621" }, { "db_name": "UniProt", "db_id": "P26889" }, { "db_name": "UniProt", "db_id": "P41687" }, { "db_name": "UniProt", "db_id": "P46648" }, { "db_name": "UniProt", "db_id": "P48090" }, { "db_name": "UniProt", "db_id": "P51493" }, { "db_name": "UniProt", "db_id": "P51745" }, { "db_name": "UniProt", "db_id": "P79162" }, { "db_name": "UniProt", "db_id": "P79182" }, { "db_name": "UniProt", "db_id": "Q28292" }, { "db_name": "UniProt", "db_id": "Q28386" }, { "db_name": "UniProt", "db_id": "Q2HZH0" }, { "db_name": "UniProt", "db_id": "Q2MH07" }, { "db_name": "UniProt", "db_id": "Q63264" }, { "db_name": "UniProt", "db_id": "Q6PUD2" }, { "db_name": "UniProt", "db_id": "Q6R2X3" }, { "db_name": "UniProt", "db_id": "Q865X8" }, { "db_name": "UniProt", "db_id": "Q8WNR2" }, { "db_name": "UniProt", "db_id": "Q9WVG1" }, { "db_name": "UniProt", "db_id": "Q9XS77" } ] }, { "id": "DS.d59.s0.e6", "type": "protein", "text": [ "VEGF" ], "offsets": [ [ 52, 56 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P15691" }, { "db_name": "UniProt", "db_id": "P15692" }, { "db_name": "UniProt", "db_id": "P26617" }, { "db_name": "UniProt", "db_id": "P49151" }, { "db_name": "UniProt", "db_id": "P50412" }, { "db_name": "UniProt", "db_id": "P67964" }, { "db_name": "UniProt", "db_id": "P67965" }, { "db_name": "UniProt", "db_id": "Q99PS1" }, { "db_name": "UniProt", "db_id": "Q9GKR0" }, { "db_name": "UniProt", "db_id": "Q9MYV3" } ] }, { "id": "DS.d59.s0.e7", "type": "protein", "text": [ "IL-1ra" ], "offsets": [ [ 58, 64 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O18999" }, { "db_name": "UniProt", "db_id": "O77482" }, { "db_name": "UniProt", "db_id": "P18510" }, { "db_name": "UniProt", "db_id": "P25085" }, { "db_name": "UniProt", "db_id": "P25086" }, { "db_name": "UniProt", "db_id": "P26890" }, { "db_name": "UniProt", "db_id": "Q29056" }, { "db_name": "UniProt", "db_id": "Q866R8" }, { "db_name": "UniProt", "db_id": "Q9BEH0" }, { "db_name": "UniProt", "db_id": "Q9GMZ4" } ] }, { "id": "DS.d59.s0.e8", "type": "protein", "text": [ "IL-10" ], "offsets": [ [ 70, 75 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O46673" }, { "db_name": "UniProt", "db_id": "O97798" }, { "db_name": "UniProt", "db_id": "P18893" }, { "db_name": "UniProt", "db_id": "P22301" }, { "db_name": "UniProt", "db_id": "P29456" }, { "db_name": "UniProt", "db_id": "P43480" }, { "db_name": "UniProt", "db_id": "P46651" }, { "db_name": "UniProt", "db_id": "P47965" }, { "db_name": "UniProt", "db_id": "P48411" }, { "db_name": "UniProt", "db_id": "P51496" }, { "db_name": "UniProt", "db_id": "P51497" }, { "db_name": "UniProt", "db_id": "P51746" }, { "db_name": "UniProt", "db_id": "P55029" }, { "db_name": "UniProt", "db_id": "P79338" }, { "db_name": "UniProt", "db_id": "Q0Z972" }, { "db_name": "UniProt", "db_id": "Q25BC1" }, { "db_name": "UniProt", "db_id": "Q28374" }, { "db_name": "UniProt", "db_id": "Q29055" }, { "db_name": "UniProt", "db_id": "Q29408" }, { "db_name": "UniProt", "db_id": "Q2PE73" }, { "db_name": "UniProt", "db_id": "Q5Q0V6" }, { "db_name": "UniProt", "db_id": "Q865X4" }, { "db_name": "UniProt", "db_id": "Q8MKG9" }, { "db_name": "UniProt", "db_id": "Q9JHK7" }, { "db_name": "UniProt", "db_id": "Q9TSJ4" }, { "db_name": "UniProt", "db_id": "Q9Z1Y5" } ] }, { "id": "DS.d59.s0.e9", "type": "compound", "text": [ "polyurethane" ], "offsets": [ [ 204, 216 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "12254" } ] }, { "id": "DS.d59.s0.e10", "type": "compound", "text": [ "polymethyl methacrylate" ], "offsets": [ [ 252, 275 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "6658" } ] }, { "id": "DS.d59.s0.e11", "type": "compound", "text": [ "2-hydroxyethyl methacrylate" ], "offsets": [ [ 305, 332 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "13360" } ] }, { "id": "DS.d59.s0.e12", "type": "compound", "text": [ "1-vinyl-2-pyrrolidinone" ], "offsets": [ [ 334, 357 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "6917" } ] }, { "id": "DS.d59.s0.e13", "type": "compound", "text": [ "polystyrene" ], "offsets": [ [ 410, 421 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "7501" } ] } ]
[]
[]
[]
DS.d60
18262559
[ { "id": "DS.d60.s0", "type": "", "text": [ "Systemic administration of hemoglobin vesicle elevates tumor tissue oxygen tension and modifies tumor response to irradiation." ], "offsets": [ [ 0, 126 ] ] } ]
[ { "id": "DS.d60.s0.e0", "type": "protein", "text": [ "hemoglobin" ], "offsets": [ [ 27, 37 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P15160" }, { "db_name": "UniProt", "db_id": "P17724" }, { "db_name": "UniProt", "db_id": "P73925" }, { "db_name": "UniProt", "db_id": "Q03459" } ] }, { "id": "DS.d60.s0.e1", "type": "compound", "text": [ "oxygen" ], "offsets": [ [ 68, 74 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "977" } ] } ]
[]
[]
[ { "id": "DS.d60.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d60.s0.e1", "arg2_id": "DS.d60.s0.e0", "normalized": [] } ]
DS.d61
18262738
[ { "id": "DS.d61.s0", "type": "", "text": [ "The participation of protein kinase A (PKA), protein kinase C (PKC) and protein tyrosine kinase (PTK) in capacitation induced by ONOO (-) was evaluated by incubation with specific inhibitors (50 microM H-89, 0.1 microM bisindolylmaleimide I, and 3 microM genistein, respectively)." ], "offsets": [ [ 0, 280 ] ] } ]
[ { "id": "DS.d61.s0.e0", "type": "protein", "text": [ "protein kinase A" ], "offsets": [ [ 21, 37 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "Q05608" }, { "db_name": "UniProt", "db_id": "Q9RI12" } ] }, { "id": "DS.d61.s0.e1", "type": "protein", "text": [ "protein kinase C" ], "offsets": [ [ 45, 61 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P13678" }, { "db_name": "UniProt", "db_id": "Q25378" } ] }, { "id": "DS.d61.s0.e2", "type": "protein", "text": [ "PKC" ], "offsets": [ [ 63, 66 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P05130" }, { "db_name": "UniProt", "db_id": "P13677" }, { "db_name": "UniProt", "db_id": "P13678" }, { "db_name": "UniProt", "db_id": "P34722" } ] }, { "id": "DS.d61.s0.e3", "type": "compound", "text": [ "ONOO" ], "offsets": [ [ 129, 133 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5460609" } ] }, { "id": "DS.d61.s0.e4", "type": "compound", "text": [ "bisindolylmaleimide I" ], "offsets": [ [ 219, 240 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "2396" } ] }, { "id": "DS.d61.s0.e5", "type": "compound", "text": [ "genistein" ], "offsets": [ [ 255, 264 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5280961" } ] } ]
[]
[]
[]
DS.d62
18266054
[ { "id": "DS.d62.s0", "type": "", "text": [ "At the time, glutathione reductase activity was significantly inhibited and gamma-glutamyl cysteine increased by ACA exposure." ], "offsets": [ [ 0, 126 ] ] } ]
[ { "id": "DS.d62.s0.e0", "type": "protein", "text": [ "glutathione reductase" ], "offsets": [ [ 13, 34 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O15770" }, { "db_name": "UniProt", "db_id": "P06715" }, { "db_name": "UniProt", "db_id": "P11804" }, { "db_name": "UniProt", "db_id": "P23189" }, { "db_name": "UniProt", "db_id": "P41921" }, { "db_name": "UniProt", "db_id": "P43783" }, { "db_name": "UniProt", "db_id": "P48638" }, { "db_name": "UniProt", "db_id": "P48639" }, { "db_name": "UniProt", "db_id": "P70619" }, { "db_name": "UniProt", "db_id": "P78965" }, { "db_name": "UniProt", "db_id": "Q60151" }, { "db_name": "UniProt", "db_id": "Q6BPI1" }, { "db_name": "UniProt", "db_id": "Q6C5H4" }, { "db_name": "UniProt", "db_id": "Q6FRV2" }, { "db_name": "UniProt", "db_id": "Q6HA23" }, { "db_name": "UniProt", "db_id": "Q74ZK4" }, { "db_name": "UniProt", "db_id": "Q873E8" }, { "db_name": "UniProt", "db_id": "Q94655" } ] }, { "id": "DS.d62.s0.e1", "type": "compound", "text": [ "cysteine" ], "offsets": [ [ 91, 99 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "594" }, { "db_name": "PubChem", "db_id": "5862" }, { "db_name": "PubChem", "db_id": "5360637" } ] } ]
[]
[]
[]
DS.d63
18268501
[ { "id": "DS.d63.s0", "type": "", "text": [ "The effect of the polymorphism is non-conservative and results in a glutamine to arginine change (Gln460Arg), which is likely to affect P2RX7 dimerization and protein-protein interactions." ], "offsets": [ [ 0, 188 ] ] } ]
[ { "id": "DS.d63.s0.e0", "type": "compound", "text": [ "glutamine" ], "offsets": [ [ 68, 77 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "738" }, { "db_name": "PubChem", "db_id": "5961" } ] }, { "id": "DS.d63.s0.e1", "type": "compound", "text": [ "arginine" ], "offsets": [ [ 81, 89 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "232" }, { "db_name": "PubChem", "db_id": "4367" }, { "db_name": "PubChem", "db_id": "6322" } ] }, { "id": "DS.d63.s0.e2", "type": "protein", "text": [ "P2RX7" ], "offsets": [ [ 136, 141 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "Q99572" } ] } ]
[]
[]
[ { "id": "DS.d63.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d63.s0.e1", "arg2_id": "DS.d63.s0.e2", "normalized": [] }, { "id": "DS.d63.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d63.s0.e0", "arg2_id": "DS.d63.s0.e2", "normalized": [] } ]
DS.d64
18270841
[ { "id": "DS.d64.s0", "type": "", "text": [ "Increased somatostatin tone and decreased ghrelin concentrations may also contribute to reduced GH levels." ], "offsets": [ [ 0, 106 ] ] } ]
[ { "id": "DS.d64.s0.e0", "type": "compound", "text": [ "somatostatin" ], "offsets": [ [ 10, 22 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "16129681" }, { "db_name": "PubChem", "db_id": "16129706" } ] }, { "id": "DS.d64.s0.e1", "type": "protein", "text": [ "ghrelin" ], "offsets": [ [ 42, 49 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "Q6BEG6" }, { "db_name": "UniProt", "db_id": "Q6BEG7" }, { "db_name": "UniProt", "db_id": "Q9BDJ6" }, { "db_name": "UniProt", "db_id": "Q9BEF8" }, { "db_name": "UniProt", "db_id": "Q9EQX0" }, { "db_name": "UniProt", "db_id": "Q9GKY5" }, { "db_name": "UniProt", "db_id": "Q9QYH7" }, { "db_name": "UniProt", "db_id": "Q9UBU3" } ] } ]
[]
[]
[]
DS.d65
18272254
[ { "id": "DS.d65.s0", "type": "", "text": [ "Inhibition of LTP by beta-amyloid is prevented by activation of beta2 adrenoceptors and stimulation of the cAMP/PKA signalling pathway." ], "offsets": [ [ 0, 135 ] ] } ]
[ { "id": "DS.d65.s0.e0", "type": "protein", "text": [ "beta2 adrenoceptors" ], "offsets": [ [ 64, 83 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O70431" }, { "db_name": "UniProt", "db_id": "P04274" }, { "db_name": "UniProt", "db_id": "P07550" }, { "db_name": "UniProt", "db_id": "P10608" }, { "db_name": "UniProt", "db_id": "P18762" }, { "db_name": "UniProt", "db_id": "P54833" }, { "db_name": "UniProt", "db_id": "Q28044" }, { "db_name": "UniProt", "db_id": "Q28509" }, { "db_name": "UniProt", "db_id": "Q28997" }, { "db_name": "UniProt", "db_id": "Q4KWL2" }, { "db_name": "UniProt", "db_id": "Q8UUY8" }, { "db_name": "UniProt", "db_id": "Q9TST5" } ] }, { "id": "DS.d65.s0.e1", "type": "compound", "text": [ "cAMP" ], "offsets": [ [ 107, 111 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "6076" } ] } ]
[]
[]
[]
DS.d66
18274872
[ { "id": "DS.d66.s0", "type": "", "text": [ ") O2 (-) and H2O2 in H. plumaeforme was respectively related to the low activity of SOD and the decreased activity of CAT." ], "offsets": [ [ 0, 122 ] ] } ]
[ { "id": "DS.d66.s0.e0", "type": "compound", "text": [ "O2" ], "offsets": [ [ 2, 4 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "977" }, { "db_name": "PubChem", "db_id": "5359597" } ] }, { "id": "DS.d66.s0.e1", "type": "compound", "text": [ "H2O2" ], "offsets": [ [ 13, 17 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "784" } ] }, { "id": "DS.d66.s0.e2", "type": "protein", "text": [ "SOD" ], "offsets": [ [ 84, 87 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O12933" }, { "db_name": "UniProt", "db_id": "O22668" }, { "db_name": "UniProt", "db_id": "O75007" }, { "db_name": "UniProt", "db_id": "P24705" }, { "db_name": "UniProt", "db_id": "P51547" }, { "db_name": "UniProt", "db_id": "P93258" }, { "db_name": "UniProt", "db_id": "Q01137" }, { "db_name": "UniProt", "db_id": "Q27666" }, { "db_name": "UniProt", "db_id": "Q9SM64" } ] }, { "id": "DS.d66.s0.e3", "type": "protein", "text": [ "CAT" ], "offsets": [ [ 118, 121 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O62839" }, { "db_name": "UniProt", "db_id": "O97492" }, { "db_name": "UniProt", "db_id": "P00432" }, { "db_name": "UniProt", "db_id": "P00485" }, { "db_name": "UniProt", "db_id": "P00486" }, { "db_name": "UniProt", "db_id": "P00487" }, { "db_name": "UniProt", "db_id": "P04040" }, { "db_name": "UniProt", "db_id": "P06135" }, { "db_name": "UniProt", "db_id": "P07641" }, { "db_name": "UniProt", "db_id": "P11504" }, { "db_name": "UniProt", "db_id": "P20074" }, { "db_name": "UniProt", "db_id": "P22782" }, { "db_name": "UniProt", "db_id": "P25309" }, { "db_name": "UniProt", "db_id": "P25819" }, { "db_name": "UniProt", "db_id": "P26825" }, { "db_name": "UniProt", "db_id": "P26826" }, { "db_name": "UniProt", "db_id": "P32796" }, { "db_name": "UniProt", "db_id": "P36882" }, { "db_name": "UniProt", "db_id": "P36883" }, { "db_name": "UniProt", "db_id": "P43155" }, { "db_name": "UniProt", "db_id": "P47934" }, { "db_name": "UniProt", "db_id": "P49417" }, { "db_name": "UniProt", "db_id": "P52826" }, { "db_name": "UniProt", "db_id": "P58777" }, { "db_name": "UniProt", "db_id": "P62577" }, { "db_name": "UniProt", "db_id": "P62578" }, { "db_name": "UniProt", "db_id": "P62579" }, { "db_name": "UniProt", "db_id": "P62580" }, { "db_name": "UniProt", "db_id": "P90682" }, { "db_name": "UniProt", "db_id": "Q00614" }, { "db_name": "UniProt", "db_id": "Q02736" }, { "db_name": "UniProt", "db_id": "Q03058" }, { "db_name": "UniProt", "db_id": "Q5RF10" }, { "db_name": "UniProt", "db_id": "Q64405" }, { "db_name": "UniProt", "db_id": "Q704S8" }, { "db_name": "UniProt", "db_id": "Q9M5L6" }, { "db_name": "UniProt", "db_id": "Q9PWF7" } ] } ]
[]
[]
[ { "id": "DS.d66.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d66.s0.e0", "arg2_id": "DS.d66.s0.e2", "normalized": [] }, { "id": "DS.d66.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d66.s0.e1", "arg2_id": "DS.d66.s0.e3", "normalized": [] }, { "id": "DS.d66.s0.i2", "type": "compound-protein-interaction", "arg1_id": "DS.d66.s0.e1", "arg2_id": "DS.d66.s0.e2", "normalized": [] }, { "id": "DS.d66.s0.i3", "type": "compound-protein-interaction", "arg1_id": "DS.d66.s0.e0", "arg2_id": "DS.d66.s0.e3", "normalized": [] } ]
DS.d67
18279956
[ { "id": "DS.d67.s0", "type": "", "text": [ "A novel oligodeoxynuleotides containing 11 CpG motifs was synthesized and inserted into the VR1020 plasmid containing pig interleukin-6 (IL-6) gene (VPIL6) to construct recombinant plasmid, VPIL6C." ], "offsets": [ [ 0, 197 ] ] } ]
[ { "id": "DS.d67.s0.e0", "type": "compound", "text": [ "CpG" ], "offsets": [ [ 43, 46 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "6804" } ] }, { "id": "DS.d67.s0.e1", "type": "protein", "text": [ "interleukin-6" ], "offsets": [ [ 122, 135 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P41693" } ] }, { "id": "DS.d67.s0.e2", "type": "protein", "text": [ "IL-6" ], "offsets": [ [ 137, 141 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O35736" }, { "db_name": "UniProt", "db_id": "P05231" }, { "db_name": "UniProt", "db_id": "P08505" }, { "db_name": "UniProt", "db_id": "P20607" }, { "db_name": "UniProt", "db_id": "P26892" }, { "db_name": "UniProt", "db_id": "P26893" }, { "db_name": "UniProt", "db_id": "P29455" }, { "db_name": "UniProt", "db_id": "P41323" }, { "db_name": "UniProt", "db_id": "P41683" }, { "db_name": "UniProt", "db_id": "P41693" }, { "db_name": "UniProt", "db_id": "P46650" }, { "db_name": "UniProt", "db_id": "P51494" }, { "db_name": "UniProt", "db_id": "P79341" }, { "db_name": "UniProt", "db_id": "Q25BC2" }, { "db_name": "UniProt", "db_id": "Q28319" }, { "db_name": "UniProt", "db_id": "Q28747" }, { "db_name": "UniProt", "db_id": "Q28819" }, { "db_name": "UniProt", "db_id": "Q2MH06" }, { "db_name": "UniProt", "db_id": "Q5I6E3" }, { "db_name": "UniProt", "db_id": "Q6V919" }, { "db_name": "UniProt", "db_id": "Q865W7" }, { "db_name": "UniProt", "db_id": "Q865X6" }, { "db_name": "UniProt", "db_id": "Q8MKH0" }, { "db_name": "UniProt", "db_id": "Q95181" }, { "db_name": "UniProt", "db_id": "Q9MZR1" }, { "db_name": "UniProt", "db_id": "Q9XT80" } ] } ]
[]
[]
[]
DS.d68
18280595
[ { "id": "DS.d68.s0", "type": "", "text": [ "Furthermore, it has also been reported that capsaicin-treated pigs significantly increase mean arterial blood pressure compared with controls and that the decrease in CGRP synthesis and release contributes to the elevated blood pressure." ], "offsets": [ [ 0, 237 ] ] } ]
[ { "id": "DS.d68.s0.e0", "type": "compound", "text": [ "capsaicin" ], "offsets": [ [ 44, 53 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "1548943" } ] }, { "id": "DS.d68.s0.e1", "type": "protein", "text": [ "CGRP" ], "offsets": [ [ 167, 171 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P10286" }, { "db_name": "UniProt", "db_id": "P30880" }, { "db_name": "UniProt", "db_id": "P30881" }, { "db_name": "UniProt", "db_id": "P31888" }, { "db_name": "UniProt", "db_id": "P80511" } ] } ]
[]
[]
[ { "id": "DS.d68.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d68.s0.e0", "arg2_id": "DS.d68.s0.e1", "normalized": [] } ]
DS.d69
18283487
[ { "id": "DS.d69.s0", "type": "", "text": [ "Since then, the efforts of numerous investigators have led to the following conclusions: (a) This enzyme is indeed the molecular machine for the ATP-dependent and-coupled transport of Na (+) and K(+) across the plasma membrane of a living cell in which such a process (sodium pump) is detected." ], "offsets": [ [ 0, 294 ] ] } ]
[ { "id": "DS.d69.s0.e0", "type": "compound", "text": [ "ATP" ], "offsets": [ [ 145, 148 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5957" } ] }, { "id": "DS.d69.s0.e1", "type": "compound", "text": [ "Na" ], "offsets": [ [ 184, 186 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "923" }, { "db_name": "PubChem", "db_id": "373840" } ] }, { "id": "DS.d69.s0.e2", "type": "protein", "text": [ "sodium pump" ], "offsets": [ [ 269, 280 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P13607" }, { "db_name": "UniProt", "db_id": "P17326" }, { "db_name": "UniProt", "db_id": "P28774" }, { "db_name": "UniProt", "db_id": "P35317" } ] } ]
[]
[]
[ { "id": "DS.d69.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d69.s0.e0", "arg2_id": "DS.d69.s0.e2", "normalized": [] }, { "id": "DS.d69.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d69.s0.e1", "arg2_id": "DS.d69.s0.e2", "normalized": [] } ]
DS.d70
18286621
[ { "id": "DS.d70.s0", "type": "", "text": [ "Affinity electrophoresis analysis provided evidence that carboxymethylated dextran polymers grafted with high amounts of benzylamide groups (named DMCB) interact with BMP-2." ], "offsets": [ [ 0, 173 ] ] }, { "id": "DS.d70.s1", "type": "", "text": [ "A screening study provided evidence that the potentiating effects of the dextran derivatives on the BMP-2-induced alkaline phosphatase activity improved with their benzylamide groups content and, therefore, with their affinity for the growth factor." ], "offsets": [ [ 174, 423 ] ] } ]
[ { "id": "DS.d70.s0.e0", "type": "compound", "text": [ "dextran" ], "offsets": [ [ 75, 82 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "4125253" }, { "db_name": "PubChem", "db_id": "5460037" } ] }, { "id": "DS.d70.s0.e1", "type": "compound", "text": [ "benzylamide" ], "offsets": [ [ 121, 132 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "10391" } ] }, { "id": "DS.d70.s0.e2", "type": "protein", "text": [ "BMP-2" ], "offsets": [ [ 167, 172 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O19006" }, { "db_name": "UniProt", "db_id": "O46564" }, { "db_name": "UniProt", "db_id": "P12643" }, { "db_name": "UniProt", "db_id": "P21274" }, { "db_name": "UniProt", "db_id": "P49001" }, { "db_name": "UniProt", "db_id": "Q804S2" }, { "db_name": "UniProt", "db_id": "Q90751" } ] }, { "id": "DS.d70.s1.e0", "type": "compound", "text": [ "dextran" ], "offsets": [ [ 247, 254 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "4125253" }, { "db_name": "PubChem", "db_id": "5460037" } ] }, { "id": "DS.d70.s1.e1", "type": "protein", "text": [ "BMP-2" ], "offsets": [ [ 274, 279 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O19006" }, { "db_name": "UniProt", "db_id": "O46564" }, { "db_name": "UniProt", "db_id": "P12643" }, { "db_name": "UniProt", "db_id": "P21274" }, { "db_name": "UniProt", "db_id": "P49001" }, { "db_name": "UniProt", "db_id": "Q804S2" }, { "db_name": "UniProt", "db_id": "Q90751" } ] }, { "id": "DS.d70.s1.e2", "type": "protein", "text": [ "alkaline phosphatase" ], "offsets": [ [ 288, 308 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O60109" }, { "db_name": "UniProt", "db_id": "P81800" }, { "db_name": "UniProt", "db_id": "P83456" } ] }, { "id": "DS.d70.s1.e3", "type": "compound", "text": [ "benzylamide" ], "offsets": [ [ 338, 349 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "10391" } ] } ]
[]
[]
[ { "id": "DS.d70.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d70.s0.e1", "arg2_id": "DS.d70.s0.e2", "normalized": [] }, { "id": "DS.d70.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d70.s0.e0", "arg2_id": "DS.d70.s0.e2", "normalized": [] }, { "id": "DS.d70.s1.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d70.s1.e3", "arg2_id": "DS.d70.s1.e2", "normalized": [] }, { "id": "DS.d70.s1.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d70.s1.e0", "arg2_id": "DS.d70.s1.e1", "normalized": [] }, { "id": "DS.d70.s1.i2", "type": "compound-protein-interaction", "arg1_id": "DS.d70.s1.e0", "arg2_id": "DS.d70.s1.e2", "normalized": [] }, { "id": "DS.d70.s1.i3", "type": "compound-protein-interaction", "arg1_id": "DS.d70.s1.e3", "arg2_id": "DS.d70.s1.e1", "normalized": [] } ]
DS.d71
18294936
[ { "id": "DS.d71.s0", "type": "", "text": [ "Since buprenorphine is metabolized through cytochrome P450 3A4, we genotyped six genetic polymorphisms previously described in poor metabolizers but could not confirm these pharmacogenetic bases in this case." ], "offsets": [ [ 0, 208 ] ] } ]
[ { "id": "DS.d71.s0.e0", "type": "compound", "text": [ "buprenorphine" ], "offsets": [ [ 6, 19 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "40400" }, { "db_name": "PubChem", "db_id": "644073" }, { "db_name": "PubChem", "db_id": "5311033" }, { "db_name": "PubChem", "db_id": "6321408" }, { "db_name": "PubChem", "db_id": "24838065" } ] }, { "id": "DS.d71.s0.e1", "type": "protein", "text": [ "cytochrome P450 3A4" ], "offsets": [ [ 43, 62 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P08684" } ] } ]
[]
[]
[ { "id": "DS.d71.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d71.s0.e0", "arg2_id": "DS.d71.s0.e1", "normalized": [] } ]
DS.d72
18295378
[ { "id": "DS.d72.s0", "type": "", "text": [ "Mitochondrial dysfunction was associated with higher levels of reactive oxygen species, an altered Bcl-xL/Bax ratio and reduction of COX IV activity." ], "offsets": [ [ 0, 149 ] ] } ]
[ { "id": "DS.d72.s0.e0", "type": "compound", "text": [ "oxygen" ], "offsets": [ [ 72, 78 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "977" } ] }, { "id": "DS.d72.s0.e1", "type": "protein", "text": [ "Bax" ], "offsets": [ [ 106, 109 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P27297" }, { "db_name": "UniProt", "db_id": "Q07813" }, { "db_name": "UniProt", "db_id": "Q63690" } ] }, { "id": "DS.d72.s0.e2", "type": "protein", "text": [ "COX" ], "offsets": [ [ 133, 136 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P11353" }, { "db_name": "UniProt", "db_id": "P36551" }, { "db_name": "UniProt", "db_id": "P36552" }, { "db_name": "UniProt", "db_id": "Q9UTE2" }, { "db_name": "UniProt", "db_id": "Q9V3D2" } ] } ]
[]
[]
[]
DS.d73
18298568
[ { "id": "DS.d73.s0", "type": "", "text": [ "Peripheral venous levels of testosterone, prolactin, follicle stimulating hormone (FSH), luteinizing hormone (LH), thyroid stimulating hormone (TSH), malondialdehyde and glycosylated haemoglobin (HbA(1)c) were obtained in all subjects." ], "offsets": [ [ 0, 235 ] ] } ]
[ { "id": "DS.d73.s0.e0", "type": "compound", "text": [ "testosterone" ], "offsets": [ [ 28, 40 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "6013" } ] }, { "id": "DS.d73.s0.e1", "type": "protein", "text": [ "prolactin" ], "offsets": [ [ 42, 51 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P10765" }, { "db_name": "UniProt", "db_id": "P22393" }, { "db_name": "UniProt", "db_id": "P33089" }, { "db_name": "UniProt", "db_id": "P33090" }, { "db_name": "UniProt", "db_id": "P33091" }, { "db_name": "UniProt", "db_id": "P43001" } ] }, { "id": "DS.d73.s0.e2", "type": "compound", "text": [ "malondialdehyde" ], "offsets": [ [ 150, 165 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "10964" } ] } ]
[]
[]
[]
DS.d74
18298570
[ { "id": "DS.d74.s0", "type": "", "text": [ "Our results showed that catalase abolished the effect of the oxidant, protecting spermatozoa against reactive oxygen species, and improving both sperm motility and chromatin status during incubation." ], "offsets": [ [ 0, 199 ] ] } ]
[ { "id": "DS.d74.s0.e0", "type": "protein", "text": [ "catalase" ], "offsets": [ [ 24, 32 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O24339" }, { "db_name": "UniProt", "db_id": "O52762" }, { "db_name": "UniProt", "db_id": "O62839" }, { "db_name": "UniProt", "db_id": "O68146" }, { "db_name": "UniProt", "db_id": "O77229" }, { "db_name": "UniProt", "db_id": "O93662" }, { "db_name": "UniProt", "db_id": "O97492" }, { "db_name": "UniProt", "db_id": "P00432" }, { "db_name": "UniProt", "db_id": "P04040" }, { "db_name": "UniProt", "db_id": "P04762" }, { "db_name": "UniProt", "db_id": "P07145" }, { "db_name": "UniProt", "db_id": "P0A323" }, { "db_name": "UniProt", "db_id": "P0A324" }, { "db_name": "UniProt", "db_id": "P0A325" }, { "db_name": "UniProt", "db_id": "P0A326" }, { "db_name": "UniProt", "db_id": "P0A327" }, { "db_name": "UniProt", "db_id": "P11934" }, { "db_name": "UniProt", "db_id": "P17336" }, { "db_name": "UniProt", "db_id": "P24168" }, { "db_name": "UniProt", "db_id": "P24270" }, { "db_name": "UniProt", "db_id": "P25890" }, { "db_name": "UniProt", "db_id": "P29422" }, { "db_name": "UniProt", "db_id": "P30265" }, { "db_name": "UniProt", "db_id": "P30266" }, { "db_name": "UniProt", "db_id": "P32290" }, { "db_name": "UniProt", "db_id": "P42321" }, { "db_name": "UniProt", "db_id": "P44390" }, { "db_name": "UniProt", "db_id": "P45737" }, { "db_name": "UniProt", "db_id": "P45739" }, { "db_name": "UniProt", "db_id": "P55304" }, { "db_name": "UniProt", "db_id": "P55306" }, { "db_name": "UniProt", "db_id": "P55310" }, { "db_name": "UniProt", "db_id": "P55311" }, { "db_name": "UniProt", "db_id": "P55313" }, { "db_name": "UniProt", "db_id": "P77872" }, { "db_name": "UniProt", "db_id": "P81138" }, { "db_name": "UniProt", "db_id": "P90682" }, { "db_name": "UniProt", "db_id": "Q27710" }, { "db_name": "UniProt", "db_id": "Q49XC1" }, { "db_name": "UniProt", "db_id": "Q4L643" }, { "db_name": "UniProt", "db_id": "Q59296" }, { "db_name": "UniProt", "db_id": "Q59337" }, { "db_name": "UniProt", "db_id": "Q59602" }, { "db_name": "UniProt", "db_id": "Q59714" }, { "db_name": "UniProt", "db_id": "Q5HG86" }, { "db_name": "UniProt", "db_id": "Q5HPK8" }, { "db_name": "UniProt", "db_id": "Q5RF10" }, { "db_name": "UniProt", "db_id": "Q64405" }, { "db_name": "UniProt", "db_id": "Q6G9M4" }, { "db_name": "UniProt", "db_id": "Q6GH72" }, { "db_name": "UniProt", "db_id": "Q7A5T2" }, { "db_name": "UniProt", "db_id": "Q8CPD0" }, { "db_name": "UniProt", "db_id": "Q8FWU0" }, { "db_name": "UniProt", "db_id": "Q8NWV5" }, { "db_name": "UniProt", "db_id": "Q8X1P0" }, { "db_name": "UniProt", "db_id": "Q8Y3P9" }, { "db_name": "UniProt", "db_id": "Q926X0" }, { "db_name": "UniProt", "db_id": "Q99UE2" }, { "db_name": "UniProt", "db_id": "Q9AXH0" }, { "db_name": "UniProt", "db_id": "Q9KW19" }, { "db_name": "UniProt", "db_id": "Q9L4S1" }, { "db_name": "UniProt", "db_id": "Q9M5L6" }, { "db_name": "UniProt", "db_id": "Q9PT92" }, { "db_name": "UniProt", "db_id": "Q9PWF7" }, { "db_name": "UniProt", "db_id": "Q9Z598" }, { "db_name": "UniProt", "db_id": "Q9ZKX5" }, { "db_name": "UniProt", "db_id": "Q9ZN99" } ] }, { "id": "DS.d74.s0.e1", "type": "compound", "text": [ "oxygen" ], "offsets": [ [ 110, 116 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "977" } ] } ]
[]
[]
[ { "id": "DS.d74.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d74.s0.e1", "arg2_id": "DS.d74.s0.e0", "normalized": [] } ]
DS.d75
18298659
[ { "id": "DS.d75.s0", "type": "", "text": [ "Intranasal and intravenous administration of live Cpn and Aa, respectively induced an accumulation of activated mast cells in the aortic sinus of apolipoprotein E-deficient mice, however, with varying responses in the systemic levels of lipopolysaccharide (LPS) and TNF-alpha." ], "offsets": [ [ 0, 276 ] ] } ]
[ { "id": "DS.d75.s0.e0", "type": "compound", "text": [ "lipopolysaccharide" ], "offsets": [ [ 237, 255 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "11970143" } ] }, { "id": "DS.d75.s0.e1", "type": "protein", "text": [ "TNF-alpha" ], "offsets": [ [ 266, 275 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O35734" }, { "db_name": "UniProt", "db_id": "O77510" }, { "db_name": "UniProt", "db_id": "O77764" }, { "db_name": "UniProt", "db_id": "P01375" }, { "db_name": "UniProt", "db_id": "P04924" }, { "db_name": "UniProt", "db_id": "P06804" }, { "db_name": "UniProt", "db_id": "P13296" }, { "db_name": "UniProt", "db_id": "P16599" }, { "db_name": "UniProt", "db_id": "P19101" }, { "db_name": "UniProt", "db_id": "P23383" }, { "db_name": "UniProt", "db_id": "P23563" }, { "db_name": "UniProt", "db_id": "P29553" }, { "db_name": "UniProt", "db_id": "P33620" }, { "db_name": "UniProt", "db_id": "P36939" }, { "db_name": "UniProt", "db_id": "P48094" }, { "db_name": "UniProt", "db_id": "P51435" }, { "db_name": "UniProt", "db_id": "P51742" }, { "db_name": "UniProt", "db_id": "P51743" }, { "db_name": "UniProt", "db_id": "P59684" }, { "db_name": "UniProt", "db_id": "P59693" }, { "db_name": "UniProt", "db_id": "P59694" }, { "db_name": "UniProt", "db_id": "P59695" }, { "db_name": "UniProt", "db_id": "P79337" }, { "db_name": "UniProt", "db_id": "P79374" }, { "db_name": "UniProt", "db_id": "Q06599" }, { "db_name": "UniProt", "db_id": "Q19LH4" }, { "db_name": "UniProt", "db_id": "Q1G1A2" }, { "db_name": "UniProt", "db_id": "Q1WM27" }, { "db_name": "UniProt", "db_id": "Q2MH05" }, { "db_name": "UniProt", "db_id": "Q539C2" }, { "db_name": "UniProt", "db_id": "Q75N23" }, { "db_name": "UniProt", "db_id": "Q8HZD9" }, { "db_name": "UniProt", "db_id": "Q8JFG3" }, { "db_name": "UniProt", "db_id": "Q8MKG8" }, { "db_name": "UniProt", "db_id": "Q8WNR1" }, { "db_name": "UniProt", "db_id": "Q9BEA1" } ] } ]
[]
[]
[]
DS.d76
18304632
[ { "id": "DS.d76.s0", "type": "", "text": [ "MnSOD and two additional catalase isozymes were induced by quinclorac or bensulfuron-methyl in S. maltophilia WZ2, but not in E. coli K12." ], "offsets": [ [ 0, 138 ] ] }, { "id": "DS.d76.s1", "type": "", "text": [ "Results indicate that catalase has a much weakly role in the defense against quinclorac or bensulfuron-methyl induced oxidative stress, whereas SOD could be critical." ], "offsets": [ [ 139, 305 ] ] } ]
[ { "id": "DS.d76.s0.e0", "type": "protein", "text": [ "MnSOD" ], "offsets": [ [ 0, 5 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P00448" }, { "db_name": "UniProt", "db_id": "P66828" }, { "db_name": "UniProt", "db_id": "P66829" }, { "db_name": "UniProt", "db_id": "Q8Z2V9" }, { "db_name": "UniProt", "db_id": "Q9RUV2" } ] }, { "id": "DS.d76.s0.e1", "type": "protein", "text": [ "catalase" ], "offsets": [ [ 25, 33 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O24339" }, { "db_name": "UniProt", "db_id": "O52762" }, { "db_name": "UniProt", "db_id": "O62839" }, { "db_name": "UniProt", "db_id": "O68146" }, { "db_name": "UniProt", "db_id": "O77229" }, { "db_name": "UniProt", "db_id": "O93662" }, { "db_name": "UniProt", "db_id": "O97492" }, { "db_name": "UniProt", "db_id": "P00432" }, { "db_name": "UniProt", "db_id": "P04040" }, { "db_name": "UniProt", "db_id": "P04762" }, { "db_name": "UniProt", "db_id": "P07145" }, { "db_name": "UniProt", "db_id": "P0A323" }, { "db_name": 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"Q926X0" }, { "db_name": "UniProt", "db_id": "Q99UE2" }, { "db_name": "UniProt", "db_id": "Q9AXH0" }, { "db_name": "UniProt", "db_id": "Q9KW19" }, { "db_name": "UniProt", "db_id": "Q9L4S1" }, { "db_name": "UniProt", "db_id": "Q9M5L6" }, { "db_name": "UniProt", "db_id": "Q9PT92" }, { "db_name": "UniProt", "db_id": "Q9PWF7" }, { "db_name": "UniProt", "db_id": "Q9Z598" }, { "db_name": "UniProt", "db_id": "Q9ZKX5" }, { "db_name": "UniProt", "db_id": "Q9ZN99" } ] }, { "id": "DS.d76.s0.e2", "type": "compound", "text": [ "quinclorac" ], "offsets": [ [ 59, 69 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "91739" } ] }, { "id": "DS.d76.s0.e3", "type": "compound", "text": [ "bensulfuron-methyl" ], "offsets": [ [ 73, 91 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "54960" } ] }, { "id": "DS.d76.s1.e0", "type": "protein", "text": [ "catalase" ], "offsets": [ [ 161, 169 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O24339" }, { "db_name": "UniProt", "db_id": "O52762" }, { "db_name": "UniProt", "db_id": "O62839" }, { "db_name": "UniProt", "db_id": "O68146" }, { "db_name": "UniProt", "db_id": "O77229" }, { "db_name": "UniProt", "db_id": "O93662" }, { "db_name": "UniProt", "db_id": "O97492" }, { "db_name": "UniProt", "db_id": "P00432" }, { "db_name": "UniProt", "db_id": "P04040" }, { "db_name": "UniProt", "db_id": "P04762" }, { "db_name": "UniProt", "db_id": "P07145" }, { "db_name": "UniProt", "db_id": "P0A323" }, { "db_name": "UniProt", "db_id": "P0A324" }, { "db_name": "UniProt", "db_id": "P0A325" }, { "db_name": "UniProt", "db_id": "P0A326" }, { "db_name": "UniProt", "db_id": "P0A327" }, { "db_name": "UniProt", "db_id": "P11934" }, { "db_name": "UniProt", "db_id": "P17336" }, { "db_name": "UniProt", "db_id": "P24168" }, { "db_name": "UniProt", "db_id": "P24270" }, { "db_name": "UniProt", "db_id": "P25890" }, { "db_name": "UniProt", "db_id": "P29422" }, { "db_name": "UniProt", "db_id": "P30265" }, { "db_name": "UniProt", "db_id": "P30266" }, { "db_name": "UniProt", "db_id": "P32290" }, { "db_name": "UniProt", "db_id": "P42321" }, { "db_name": "UniProt", "db_id": "P44390" }, { "db_name": "UniProt", "db_id": "P45737" }, { "db_name": "UniProt", "db_id": "P45739" }, { "db_name": "UniProt", "db_id": "P55304" }, { "db_name": "UniProt", "db_id": "P55306" }, { "db_name": "UniProt", "db_id": "P55310" }, { "db_name": "UniProt", "db_id": "P55311" }, { "db_name": "UniProt", "db_id": "P55313" }, { "db_name": "UniProt", "db_id": "P77872" }, { "db_name": "UniProt", "db_id": "P81138" }, { "db_name": "UniProt", "db_id": "P90682" }, { "db_name": "UniProt", "db_id": "Q27710" }, { "db_name": "UniProt", "db_id": "Q49XC1" }, { "db_name": "UniProt", "db_id": "Q4L643" }, { "db_name": "UniProt", "db_id": "Q59296" }, { "db_name": "UniProt", "db_id": "Q59337" }, { "db_name": "UniProt", "db_id": "Q59602" }, { "db_name": "UniProt", "db_id": "Q59714" }, { "db_name": "UniProt", "db_id": "Q5HG86" }, { "db_name": "UniProt", "db_id": "Q5HPK8" }, { "db_name": "UniProt", "db_id": "Q5RF10" }, { "db_name": "UniProt", "db_id": "Q64405" }, { "db_name": "UniProt", "db_id": "Q6G9M4" }, { "db_name": "UniProt", "db_id": "Q6GH72" }, { "db_name": "UniProt", "db_id": "Q7A5T2" }, { "db_name": "UniProt", "db_id": "Q8CPD0" }, { "db_name": "UniProt", "db_id": "Q8FWU0" }, { "db_name": "UniProt", "db_id": "Q8NWV5" }, { "db_name": "UniProt", "db_id": "Q8X1P0" }, { "db_name": "UniProt", "db_id": "Q8Y3P9" }, { "db_name": "UniProt", "db_id": "Q926X0" }, { "db_name": "UniProt", "db_id": "Q99UE2" }, { "db_name": "UniProt", "db_id": "Q9AXH0" }, { "db_name": "UniProt", "db_id": "Q9KW19" }, { "db_name": "UniProt", "db_id": "Q9L4S1" }, { "db_name": "UniProt", "db_id": "Q9M5L6" }, { "db_name": "UniProt", "db_id": "Q9PT92" }, { "db_name": "UniProt", "db_id": "Q9PWF7" }, { "db_name": "UniProt", "db_id": "Q9Z598" }, { "db_name": "UniProt", "db_id": "Q9ZKX5" }, { "db_name": "UniProt", "db_id": "Q9ZN99" } ] }, { "id": "DS.d76.s1.e1", "type": "compound", "text": [ "quinclorac" ], "offsets": [ [ 216, 226 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "91739" } ] }, { "id": "DS.d76.s1.e2", "type": "compound", "text": [ "bensulfuron-methyl" ], "offsets": [ [ 230, 248 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "54960" } ] }, { "id": "DS.d76.s1.e3", "type": "protein", "text": [ "SOD" ], "offsets": [ [ 283, 286 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O12933" }, { "db_name": "UniProt", "db_id": "O22668" }, { "db_name": "UniProt", "db_id": "O75007" }, { "db_name": "UniProt", "db_id": "P24705" }, { "db_name": "UniProt", "db_id": "P51547" }, { "db_name": "UniProt", "db_id": "P93258" }, { "db_name": "UniProt", "db_id": "Q01137" }, { "db_name": "UniProt", "db_id": "Q27666" }, { "db_name": "UniProt", "db_id": "Q9SM64" } ] } ]
[]
[]
[ { "id": "DS.d76.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d76.s0.e2", "arg2_id": "DS.d76.s0.e0", "normalized": [] }, { "id": "DS.d76.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d76.s0.e2", "arg2_id": "DS.d76.s0.e1", "normalized": [] }, { "id": "DS.d76.s0.i2", "type": "compound-protein-interaction", "arg1_id": "DS.d76.s0.e3", "arg2_id": "DS.d76.s0.e0", "normalized": [] }, { "id": "DS.d76.s0.i3", "type": "compound-protein-interaction", "arg1_id": "DS.d76.s0.e3", "arg2_id": "DS.d76.s0.e1", "normalized": [] }, { "id": "DS.d76.s1.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d76.s1.e1", "arg2_id": "DS.d76.s1.e0", "normalized": [] }, { "id": "DS.d76.s1.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d76.s1.e2", "arg2_id": "DS.d76.s1.e3", "normalized": [] }, { "id": "DS.d76.s1.i2", "type": "compound-protein-interaction", "arg1_id": "DS.d76.s1.e2", "arg2_id": "DS.d76.s1.e0", "normalized": [] }, { "id": "DS.d76.s1.i3", "type": "compound-protein-interaction", "arg1_id": "DS.d76.s1.e1", "arg2_id": "DS.d76.s1.e3", "normalized": [] } ]
DS.d77
18304748
[ { "id": "DS.d77.s0", "type": "", "text": [ "Moreover, TARPs (except gamma4) reduce the ion channel block by the synthetic Joro spider toxin analog 1-naphthylacetyl spermine (NASP)." ], "offsets": [ [ 0, 136 ] ] } ]
[ { "id": "DS.d77.s0.e0", "type": "protein", "text": [ "TARPs" ], "offsets": [ [ 10, 15 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "Q99JR5" } ] }, { "id": "DS.d77.s0.e1", "type": "compound", "text": [ "Joro spider toxin" ], "offsets": [ [ 78, 95 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "119582" }, { "db_name": "PubChem", "db_id": "5311197" } ] }, { "id": "DS.d77.s0.e2", "type": "compound", "text": [ "1-naphthylacetyl spermine" ], "offsets": [ [ 103, 128 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "129695" } ] } ]
[]
[]
[ { "id": "DS.d77.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d77.s0.e2", "arg2_id": "DS.d77.s0.e0", "normalized": [] } ]
DS.d78
18306310
[ { "id": "DS.d78.s0", "type": "", "text": [ "SMC cultured on P(100/0) films modified by covalently attached fibronectin or fibrin layers proliferated at a rate comparable to that observed on control tissue culture polystyrene." ], "offsets": [ [ 0, 181 ] ] }, { "id": "DS.d78.s1", "type": "", "text": [ "However, prewetting P(70/30) with a phosphate buffer prior to aminolysis significantly improved cell numbers following immobilization of fibronectin." ], "offsets": [ [ 182, 331 ] ] } ]
[ { "id": "DS.d78.s0.e0", "type": "protein", "text": [ "fibronectin" ], "offsets": [ [ 63, 74 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P07589" }, { "db_name": "UniProt", "db_id": "P11722" }, { "db_name": "UniProt", "db_id": "Q28275" }, { "db_name": "UniProt", "db_id": "Q28377" }, { "db_name": "UniProt", "db_id": "Q28749" }, { "db_name": "UniProt", "db_id": "Q91289" }, { "db_name": "UniProt", "db_id": "Q91400" } ] }, { "id": "DS.d78.s0.e1", "type": "compound", "text": [ "polystyrene" ], "offsets": [ [ 169, 180 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "7501" } ] }, { "id": "DS.d78.s1.e0", "type": "compound", "text": [ "phosphate" ], "offsets": [ [ 218, 227 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "1061" }, { "db_name": "PubChem", "db_id": "167704" }, { "db_name": "PubChem", "db_id": "644102" } ] }, { "id": "DS.d78.s1.e1", "type": "protein", "text": [ "fibronectin" ], "offsets": [ [ 319, 330 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P07589" }, { "db_name": "UniProt", "db_id": "P11722" }, { "db_name": "UniProt", "db_id": "Q28275" }, { "db_name": "UniProt", "db_id": "Q28377" }, { "db_name": "UniProt", "db_id": "Q28749" }, { "db_name": "UniProt", "db_id": "Q91289" }, { "db_name": "UniProt", "db_id": "Q91400" } ] } ]
[]
[]
[]
DS.d79
18308488
[ { "id": "DS.d79.s0", "type": "", "text": [ "The dose of ACTH (2.5 microg/kg) was chosen to mimic the cortisol concentrations seen during mixing of unfamiliar sows." ], "offsets": [ [ 0, 119 ] ] } ]
[ { "id": "DS.d79.s0.e0", "type": "protein", "text": [ "ACTH" ], "offsets": [ [ 12, 16 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P01189" }, { "db_name": "UniProt", "db_id": "P01190" }, { "db_name": "UniProt", "db_id": "P01191" }, { "db_name": "UniProt", "db_id": "P01192" }, { "db_name": "UniProt", "db_id": "P01193" }, { "db_name": "UniProt", "db_id": "P01194" }, { "db_name": "UniProt", "db_id": "P01196" }, { "db_name": "UniProt", "db_id": "P01197" }, { "db_name": "UniProt", "db_id": "P01201" }, { "db_name": "UniProt", "db_id": "P06297" }, { "db_name": "UniProt", "db_id": "P06298" }, { "db_name": "UniProt", "db_id": "P06299" }, { "db_name": "UniProt", "db_id": "P10000" }, { "db_name": "UniProt", "db_id": "P11280" }, { "db_name": "UniProt", "db_id": "P11885" }, { "db_name": "UniProt", "db_id": "P19402" }, { "db_name": "UniProt", "db_id": "P21252" }, { "db_name": "UniProt", "db_id": "P22923" }, { "db_name": "UniProt", "db_id": "P68000" }, { "db_name": "UniProt", "db_id": "P68001" }, { "db_name": "UniProt", "db_id": "P87352" }, { "db_name": "UniProt", "db_id": "Q04617" }, { "db_name": "UniProt", "db_id": "Q04618" }, { "db_name": "UniProt", "db_id": "Q91082" }, { "db_name": "UniProt", "db_id": "Q9YGK2" }, { "db_name": "UniProt", "db_id": "Q9YGK4" }, { "db_name": "UniProt", "db_id": "Q9YGK5" } ] }, { "id": "DS.d79.s0.e1", "type": "compound", "text": [ "cortisol" ], "offsets": [ [ 57, 65 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5754" } ] } ]
[]
[]
[]
DS.d80
18311594
[ { "id": "DS.d80.s0", "type": "", "text": [ "Our data suggest HumDN1 genotypes are related to total cholesterol levels in Han Chinese MI patients, but deoxyribonuclease I gene polymorphisms are not associated with susceptibility to MI in Han Chinese." ], "offsets": [ [ 0, 205 ] ] } ]
[ { "id": "DS.d80.s0.e0", "type": "compound", "text": [ "cholesterol" ], "offsets": [ [ 55, 66 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "304" }, { "db_name": "PubChem", "db_id": "5997" }, { "db_name": "PubChem", "db_id": "6432564" }, { "db_name": "PubChem", "db_id": "11025495" } ] }, { "id": "DS.d80.s0.e1", "type": "protein", "text": [ "deoxyribonuclease I" ], "offsets": [ [ 106, 125 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O18998" }, { "db_name": "UniProt", "db_id": "O42446" }, { "db_name": "UniProt", "db_id": "P00639" }, { "db_name": "UniProt", "db_id": "P11936" }, { "db_name": "UniProt", "db_id": "P11937" }, { "db_name": "UniProt", "db_id": "P21704" }, { "db_name": "UniProt", "db_id": "P24855" }, { "db_name": "UniProt", "db_id": "P49183" }, { "db_name": "UniProt", "db_id": "Q4AEE3" }, { "db_name": "UniProt", "db_id": "Q767J3" }, { "db_name": "UniProt", "db_id": "Q9YGI5" } ] } ]
[]
[]
[]
DS.d81
18314895
[ { "id": "DS.d81.s0", "type": "", "text": [ "Specifically, TEG was shown to alter S. mutans gene expression levels of gtfB, a known virulence factor, and yfiV, a putative transcriptional regulator of cell-surface fatty acid genes." ], "offsets": [ [ 0, 185 ] ] } ]
[ { "id": "DS.d81.s0.e0", "type": "compound", "text": [ "TEG" ], "offsets": [ [ 14, 17 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "8172" } ] }, { "id": "DS.d81.s0.e1", "type": "protein", "text": [ "gtfB" ], "offsets": [ [ 73, 77 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P08987" } ] }, { "id": "DS.d81.s0.e2", "type": "protein", "text": [ "transcriptional regulator" ], "offsets": [ [ 126, 151 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "Q9CJ45" } ] } ]
[]
[]
[ { "id": "DS.d81.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d81.s0.e0", "arg2_id": "DS.d81.s0.e2", "normalized": [] }, { "id": "DS.d81.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d81.s0.e0", "arg2_id": "DS.d81.s0.e1", "normalized": [] } ]
DS.d82
18314898
[ { "id": "DS.d82.s0", "type": "", "text": [ "Degradation analysis over 8 weeks in the presence of 10 mg/L lysozyme showed a 50% decrease in total weight and an 80% decrease in PLGA molecular weight." ], "offsets": [ [ 0, 153 ] ] } ]
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[]
[]
[ { "id": "DS.d82.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d82.s0.e1", "arg2_id": "DS.d82.s0.e0", "normalized": [] } ]
DS.d83
18317936
[ { "id": "DS.d83.s0", "type": "", "text": [ "Fluo-3 staining used in flow cytometry and video microscopy revealed an oxysterol-induced Ca(2+) influx, varying according to the oxysterol studied, leading to the activation of the MEK/ERK1/2 pathway as demonstrated by Western blot analysis." ], "offsets": [ [ 0, 242 ] ] } ]
[ { "id": "DS.d83.s0.e0", "type": "compound", "text": [ "Ca(2" ], "offsets": [ [ 90, 94 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "271" } ] }, { "id": "DS.d83.s0.e1", "type": "protein", "text": [ "ERK1" ], "offsets": [ [ 186, 190 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P27361" }, { "db_name": "UniProt", "db_id": "P28869" }, { "db_name": "UniProt", "db_id": "P42525" }, { "db_name": "UniProt", "db_id": "Q07176" } ] } ]
[]
[]
[ { "id": "DS.d83.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d83.s0.e0", "arg2_id": "DS.d83.s0.e1", "normalized": [] } ]
DS.d84
18327670
[ { "id": "DS.d84.s0", "type": "", "text": [ "To determine if response to endocrine therapy of breast cancer can be predicted by either a metabolic \"flare reaction\" detected by positron emission tomography (PET) with 2-((18)F)-fluoro-2-deoxyglucose (FDG), induced by an estradiol challenge, or by estrogen-receptor (ER) status, determined by PET with the estrogen analog 16alpha-((18)F)fluoroestradiol-17beta (FES)." ], "offsets": [ [ 0, 369 ] ] } ]
[ { "id": "DS.d84.s0.e0", "type": "compound", "text": [ "2-deoxyglucose" ], "offsets": [ [ 188, 202 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "108223" } ] }, { "id": "DS.d84.s0.e1", "type": "compound", "text": [ "estradiol" ], "offsets": [ [ 224, 233 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5757" } ] }, { "id": "DS.d84.s0.e2", "type": "protein", "text": [ "estrogen-receptor" ], "offsets": [ [ 251, 268 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O42132" }, { "db_name": "UniProt", "db_id": "P03372" }, { "db_name": "UniProt", "db_id": "P06211" }, { "db_name": "UniProt", "db_id": "P06212" }, { "db_name": "UniProt", "db_id": "P16058" }, { "db_name": "UniProt", "db_id": "P19785" }, { "db_name": "UniProt", "db_id": "P49884" }, { "db_name": "UniProt", "db_id": "P49885" }, { "db_name": "UniProt", "db_id": "P49886" }, { "db_name": "UniProt", "db_id": "P50240" }, { "db_name": "UniProt", "db_id": "P50241" }, { "db_name": "UniProt", "db_id": "P50242" }, { "db_name": "UniProt", "db_id": "P57717" }, { "db_name": "UniProt", "db_id": "P57753" }, { "db_name": "UniProt", "db_id": "P81559" }, { "db_name": "UniProt", "db_id": "Q29040" }, { "db_name": "UniProt", "db_id": "Q53AD2" }, { "db_name": "UniProt", "db_id": "Q91250" }, { "db_name": "UniProt", "db_id": "Q91424" }, { "db_name": "UniProt", "db_id": "Q9PVZ9" }, { "db_name": "UniProt", "db_id": "Q9QZJ5" }, { "db_name": "UniProt", "db_id": "Q9TV98" }, { "db_name": "UniProt", "db_id": "Q9YH33" }, { "db_name": "UniProt", "db_id": "Q9YHT3" }, { "db_name": "UniProt", "db_id": "Q9YHZ7" } ] } ]
[]
[]
[]
DS.d85
18328561
[ { "id": "DS.d85.s0", "type": "", "text": [ "Depletion of GSH levels was accompanied by the induction of glutathione reductase (GR) after 24h exposure with each of the four carbamates to CHO-K1 cells." ], "offsets": [ [ 0, 155 ] ] } ]
[ { "id": "DS.d85.s0.e0", "type": "compound", "text": [ "GSH" ], "offsets": [ [ 13, 16 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "124886" } ] }, { "id": "DS.d85.s0.e1", "type": "protein", "text": [ "glutathione reductase" ], "offsets": [ [ 60, 81 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O15770" }, { "db_name": "UniProt", "db_id": "P06715" }, { "db_name": "UniProt", "db_id": "P11804" }, { "db_name": "UniProt", "db_id": "P23189" }, { "db_name": "UniProt", "db_id": "P41921" }, { "db_name": "UniProt", "db_id": "P43783" }, { "db_name": "UniProt", "db_id": "P48638" }, { "db_name": "UniProt", "db_id": "P48639" }, { "db_name": "UniProt", "db_id": "P70619" }, { "db_name": "UniProt", "db_id": "P78965" }, { "db_name": "UniProt", "db_id": "Q60151" }, { "db_name": "UniProt", "db_id": "Q6BPI1" }, { "db_name": "UniProt", "db_id": "Q6C5H4" }, { "db_name": "UniProt", "db_id": "Q6FRV2" }, { "db_name": "UniProt", "db_id": "Q6HA23" }, { "db_name": "UniProt", "db_id": "Q74ZK4" }, { "db_name": "UniProt", "db_id": "Q873E8" }, { "db_name": "UniProt", "db_id": "Q94655" } ] } ]
[]
[]
[ { "id": "DS.d85.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d85.s0.e0", "arg2_id": "DS.d85.s0.e1", "normalized": [] } ]
DS.d86
18330498
[ { "id": "DS.d86.s0", "type": "", "text": [ "Chloroquine and wortmannin inhibited the upregulation induced by insulin stimulation and amino acid deprivation but not that induced by osmotic shock." ], "offsets": [ [ 0, 150 ] ] }, { "id": "DS.d86.s1", "type": "", "text": [ "Moreover, PD98059 and SP600125 inhibited only amino acid deprivation-induced upregulation and SB202190 inhibited only insulin-induced upregulation." ], "offsets": [ [ 151, 298 ] ] } ]
[ { "id": "DS.d86.s0.e0", "type": "compound", "text": [ "Chloroquine" ], "offsets": [ [ 0, 11 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "2719" } ] }, { "id": "DS.d86.s0.e1", "type": "compound", "text": [ "wortmannin" ], "offsets": [ [ 16, 26 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "312145" } ] }, { "id": "DS.d86.s0.e2", "type": "protein", "text": [ "insulin" ], "offsets": [ [ 65, 72 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P01314" }, { "db_name": "UniProt", "db_id": "P01316" }, { "db_name": "UniProt", "db_id": "P01319" }, { "db_name": "UniProt", "db_id": "P01320" }, { "db_name": "UniProt", "db_id": "P01324" }, { "db_name": "UniProt", "db_id": "P01328" }, { "db_name": "UniProt", "db_id": "P01330" }, { "db_name": "UniProt", "db_id": "P01331" }, { "db_name": "UniProt", "db_id": "P01334" }, { "db_name": "UniProt", "db_id": "P01336" }, { "db_name": "UniProt", "db_id": "P01340" }, { "db_name": "UniProt", "db_id": "P07453" }, { "db_name": "UniProt", "db_id": "P09476" }, { "db_name": "UniProt", "db_id": "P09477" }, { "db_name": "UniProt", "db_id": "P0C236" }, { "db_name": "UniProt", "db_id": "P12703" }, { "db_name": "UniProt", "db_id": "P12704" }, { "db_name": "UniProt", "db_id": "P12708" }, { "db_name": "UniProt", "db_id": "P13190" }, { "db_name": "UniProt", "db_id": "P18109" }, { "db_name": "UniProt", "db_id": "P29335" }, { "db_name": "UniProt", "db_id": "P42633" }, { "db_name": "UniProt", "db_id": "P67968" }, { "db_name": "UniProt", "db_id": "P67969" }, { "db_name": "UniProt", "db_id": "P67971" }, { "db_name": "UniProt", "db_id": "P67973" }, { "db_name": "UniProt", "db_id": "P67974" }, { "db_name": "UniProt", "db_id": "P68243" }, { "db_name": "UniProt", "db_id": "P68245" }, { "db_name": "UniProt", "db_id": "P68987" }, { "db_name": "UniProt", "db_id": "P68988" }, { "db_name": "UniProt", "db_id": "P68989" }, { "db_name": "UniProt", "db_id": "P68990" }, { "db_name": "UniProt", "db_id": "P68991" }, { "db_name": "UniProt", "db_id": "P68992" }, { "db_name": "UniProt", "db_id": "P69046" }, { "db_name": "UniProt", "db_id": "P69047" }, { "db_name": "UniProt", "db_id": "P69048" }, { "db_name": "UniProt", "db_id": "P81423" }, { "db_name": "UniProt", "db_id": "P81881" }, { "db_name": "UniProt", "db_id": "Q9TQY7" } ] }, { "id": "DS.d86.s1.e0", "type": "compound", "text": [ "PD98059" ], "offsets": [ [ 161, 168 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "4713" } ] }, { "id": "DS.d86.s1.e1", "type": "compound", "text": [ "SP600125" ], "offsets": [ [ 173, 181 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "8515" } ] }, { "id": "DS.d86.s1.e2", "type": "compound", "text": [ "SB202190" ], "offsets": [ [ 245, 253 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5353940" } ] }, { "id": "DS.d86.s1.e3", "type": "protein", "text": [ "insulin" ], "offsets": [ [ 269, 276 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P01314" }, { "db_name": "UniProt", "db_id": "P01316" }, { "db_name": "UniProt", "db_id": "P01319" }, { "db_name": "UniProt", "db_id": "P01320" }, { "db_name": "UniProt", "db_id": "P01324" }, { "db_name": "UniProt", "db_id": "P01328" }, { "db_name": "UniProt", "db_id": "P01330" }, { "db_name": "UniProt", "db_id": "P01331" }, { "db_name": "UniProt", "db_id": "P01334" }, { "db_name": "UniProt", "db_id": "P01336" }, { "db_name": "UniProt", "db_id": "P01340" }, { "db_name": "UniProt", "db_id": "P07453" }, { "db_name": "UniProt", "db_id": "P09476" }, { "db_name": "UniProt", "db_id": "P09477" }, { "db_name": "UniProt", "db_id": "P0C236" }, { "db_name": "UniProt", "db_id": "P12703" }, { "db_name": "UniProt", "db_id": "P12704" }, { "db_name": "UniProt", "db_id": "P12708" }, { "db_name": "UniProt", "db_id": "P13190" }, { "db_name": "UniProt", "db_id": "P18109" }, { "db_name": "UniProt", "db_id": "P29335" }, { "db_name": "UniProt", "db_id": "P42633" }, { "db_name": "UniProt", "db_id": "P67968" }, { "db_name": "UniProt", "db_id": "P67969" }, { "db_name": "UniProt", "db_id": "P67971" }, { "db_name": "UniProt", "db_id": "P67973" }, { "db_name": "UniProt", "db_id": "P67974" }, { "db_name": "UniProt", "db_id": "P68243" }, { "db_name": "UniProt", "db_id": "P68245" }, { "db_name": "UniProt", "db_id": "P68987" }, { "db_name": "UniProt", "db_id": "P68988" }, { "db_name": "UniProt", "db_id": "P68989" }, { "db_name": "UniProt", "db_id": "P68990" }, { "db_name": "UniProt", "db_id": "P68991" }, { "db_name": "UniProt", "db_id": "P68992" }, { "db_name": "UniProt", "db_id": "P69046" }, { "db_name": "UniProt", "db_id": "P69047" }, { "db_name": "UniProt", "db_id": "P69048" }, { "db_name": "UniProt", "db_id": "P81423" }, { "db_name": "UniProt", "db_id": "P81881" }, { "db_name": "UniProt", "db_id": "Q9TQY7" } ] } ]
[]
[]
[ { "id": "DS.d86.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d86.s0.e0", "arg2_id": "DS.d86.s0.e2", "normalized": [] }, { "id": "DS.d86.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d86.s0.e1", "arg2_id": "DS.d86.s0.e2", "normalized": [] }, { "id": "DS.d86.s1.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d86.s1.e2", "arg2_id": "DS.d86.s1.e3", "normalized": [] } ]
DS.d87
18331557
[ { "id": "DS.d87.s0", "type": "", "text": [ "The role of phosphorylated Akt (p-Akt) in oral carcinogenesis induced by nicotine and alkaline environments was investigated." ], "offsets": [ [ 0, 125 ] ] } ]
[ { "id": "DS.d87.s0.e0", "type": "protein", "text": [ "Akt" ], "offsets": [ [ 27, 30 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P31750" }, { "db_name": "UniProt", "db_id": "Q8INB9" } ] }, { "id": "DS.d87.s0.e1", "type": "protein", "text": [ "Akt" ], "offsets": [ [ 34, 37 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P31750" }, { "db_name": "UniProt", "db_id": "Q8INB9" } ] }, { "id": "DS.d87.s0.e2", "type": "compound", "text": [ "nicotine" ], "offsets": [ [ 73, 81 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "942" }, { "db_name": "PubChem", "db_id": "89594" }, { "db_name": "PubChem", "db_id": "157672" } ] } ]
[]
[]
[]
DS.d88
18336537
[ { "id": "DS.d88.s0", "type": "", "text": [ "Sera from a population sample of infants with cryptorchidism (n = 43), hypospadias (n = 41) and controls (n = 113) were analyzed for inhibin B, anti-Müllerian hormone (AMH), testosterone, luteinizing hormone (LH), follicle stimulating hormone (FSH) and sex hormone binding globulin (SHBG)." ], "offsets": [ [ 0, 289 ] ] } ]
[ { "id": "DS.d88.s0.e0", "type": "protein", "text": [ "AMH" ], "offsets": [ [ 168, 171 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P03971" }, { "db_name": "UniProt", "db_id": "P03972" }, { "db_name": "UniProt", "db_id": "P27106" }, { "db_name": "UniProt", "db_id": "P49000" }, { "db_name": "UniProt", "db_id": "P79295" } ] }, { "id": "DS.d88.s0.e1", "type": "compound", "text": [ "testosterone" ], "offsets": [ [ 174, 186 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "6013" } ] }, { "id": "DS.d88.s0.e2", "type": "protein", "text": [ "SHBG" ], "offsets": [ [ 283, 287 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P04278" }, { "db_name": "UniProt", "db_id": "P08689" }, { "db_name": "UniProt", "db_id": "P15196" }, { "db_name": "UniProt", "db_id": "P97497" }, { "db_name": "UniProt", "db_id": "Q62588" } ] } ]
[]
[]
[]
DS.d89
18340529
[ { "id": "DS.d89.s0", "type": "", "text": [ "Myeloperoxidase (MPO) is an endogenous oxidant enzyme that generates reactive oxygen species (ROS)." ], "offsets": [ [ 0, 99 ] ] } ]
[ { "id": "DS.d89.s0.e0", "type": "protein", "text": [ "MPO" ], "offsets": [ [ 17, 20 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P05164" }, { "db_name": "UniProt", "db_id": "P11247" } ] }, { "id": "DS.d89.s0.e1", "type": "compound", "text": [ "oxygen" ], "offsets": [ [ 78, 84 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "977" } ] } ]
[]
[]
[ { "id": "DS.d89.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d89.s0.e1", "arg2_id": "DS.d89.s0.e0", "normalized": [] } ]
DS.d90
18343629
[ { "id": "DS.d90.s0", "type": "", "text": [ "In present study, we investigated the combined effect of emodin and baicalin on pancreatic damage and pancreatitis associated lung injury, as well as tissue TLR4 expression in the setting of AP." ], "offsets": [ [ 0, 194 ] ] }, { "id": "DS.d90.s1", "type": "", "text": [ "The results showed that combination of emodin and baicalin significantly reduced serum amylase, tumor necrosis factor-alpha and interleukin-6, attenuated pancreatic and pulmonary damage, also suppressed TLR4 expression in pancreas and lung." ], "offsets": [ [ 195, 435 ] ] } ]
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[]
[]
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DS.d91
18346857
[ { "id": "DS.d91.s0", "type": "", "text": [ "Results showed that a moderate dose of leptin (250 microg/kg body weight/day) injected during the re-feeding period: (i) promoted the recovery of the regressed ovary as evidenced by an increase in ovary weight and recovery of yellow hierarchical follicles; (ii) elevated the plasma 17beta-estradiol (E(2)) level; (iii) increased the mRNA levels of ovary follicle-stimulating hormone receptor (FSHR), luteinizing hormone receptor (LHR) and estrogen receptor-beta (ER-beta)." ], "offsets": [ [ 0, 472 ] ] } ]
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[]
[]
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DS.d92
18357521
[ { "id": "DS.d92.s0", "type": "", "text": [ "The anti-neoplastic drug taxol binds to beta-tubulin to prevent tumor cell division, promoting cell death." ], "offsets": [ [ 0, 106 ] ] }, { "id": "DS.d92.s1", "type": "", "text": [ "In the current study, we knocked down Bcl-2 expression using cognate siRNA during low-dose taxol treatment to induce apoptosis in two human glioblastoma U138MG and U251MG cell lines." ], "offsets": [ [ 107, 289 ] ] }, { "id": "DS.d92.s2", "type": "", "text": [ "The cells were treated with either 100 nM taxol or 100 nM Bcl-2 siRNA or both for 72 h. Immunofluorescent stainings for calpain and active caspase-3 showed increases in expression and co-localization of these proteases in apoptotic cells." ], "offsets": [ [ 290, 528 ] ] }, { "id": "DS.d92.s3", "type": "", "text": [ "Our current study demonstrated that Bcl-2 siRNA significantly augmented taxol mediated apoptosis in different human glioblastoma cells through induction of calpain and caspase proteolytic activities." ], "offsets": [ [ 529, 728 ] ] } ]
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"db_name": "UniProt", "db_id": "P10417" }, { "db_name": "UniProt", "db_id": "P49950" } ] }, { "id": "DS.d92.s1.e1", "type": "compound", "text": [ "taxol" ], "offsets": [ [ 198, 203 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "4666" }, { "db_name": "PubChem", "db_id": "36314" }, { "db_name": "PubChem", "db_id": "441276" } ] }, { "id": "DS.d92.s2.e0", "type": "compound", "text": [ "taxol" ], "offsets": [ [ 332, 337 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "4666" }, { "db_name": "PubChem", "db_id": "36314" }, { "db_name": "PubChem", "db_id": "441276" } ] }, { "id": "DS.d92.s2.e1", "type": "protein", "text": [ "proteases" ], "offsets": [ [ 499, 508 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O41798" }, { "db_name": "UniProt", "db_id": "O89290" }, { "db_name": "UniProt", "db_id": "O89940" }, { "db_name": "UniProt", "db_id": "O91080" }, { "db_name": "UniProt", "db_id": "O93215" }, { "db_name": "UniProt", "db_id": "P03311" }, { "db_name": "UniProt", "db_id": 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"db_id": "Q74120" }, { "db_name": "UniProt", "db_id": "Q75002" }, { "db_name": "UniProt", "db_id": "Q76634" }, { "db_name": "UniProt", "db_id": "Q77373" }, { "db_name": "UniProt", "db_id": "Q79666" }, { "db_name": "UniProt", "db_id": "Q89928" }, { "db_name": "UniProt", "db_id": "Q8AII1" }, { "db_name": "UniProt", "db_id": "Q8I7P9" }, { "db_name": "UniProt", "db_id": "Q9IDV9" }, { "db_name": "UniProt", "db_id": "Q9Q720" }, { "db_name": "UniProt", "db_id": "Q9QBY3" }, { "db_name": "UniProt", "db_id": "Q9QBZ1" }, { "db_name": "UniProt", "db_id": "Q9QBZ5" }, { "db_name": "UniProt", "db_id": "Q9QSR3" }, { "db_name": "UniProt", "db_id": "Q9WC54" }, { "db_name": "UniProt", "db_id": "Q9WC63" }, { "db_name": "UniProt", "db_id": "Q9Y6I0" } ] }, { "id": "DS.d92.s3.e0", "type": "compound", "text": [ "taxol" ], "offsets": [ [ 601, 606 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "4666" }, { "db_name": "PubChem", "db_id": "36314" }, { "db_name": "PubChem", "db_id": "441276" } ] }, { "id": "DS.d92.s3.e1", "type": "protein", "text": [ "calpain" ], "offsets": [ [ 685, 692 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P27730" } ] } ]
[]
[]
[ { "id": "DS.d92.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d92.s0.e0", "arg2_id": "DS.d92.s0.e1", "normalized": [] }, { "id": "DS.d92.s1.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d92.s1.e1", "arg2_id": "DS.d92.s1.e0", "normalized": [] }, { "id": "DS.d92.s2.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d92.s2.e0", "arg2_id": "DS.d92.s2.e1", "normalized": [] }, { "id": "DS.d92.s3.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d92.s3.e0", "arg2_id": "DS.d92.s3.e1", "normalized": [] } ]
DS.d93
18357522
[ { "id": "DS.d93.s0", "type": "", "text": [ "Based on these findings, altered expression of PLP1 in most areas of the striatum suggests that widespread changes to the myelin structure could be associated with the adaptive changes following chronic cocaine abuse." ], "offsets": [ [ 0, 217 ] ] } ]
[ { "id": "DS.d93.s0.e0", "type": "protein", "text": [ "PLP1" ], "offsets": [ [ 47, 51 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P04116" }, { "db_name": "UniProt", "db_id": "P23289" }, { "db_name": "UniProt", "db_id": "P23294" }, { "db_name": "UniProt", "db_id": "P47789" }, { "db_name": "UniProt", "db_id": "P47790" }, { "db_name": "UniProt", "db_id": "P60201" }, { "db_name": "UniProt", "db_id": "Q04004" }, { "db_name": "UniProt", "db_id": "Q08868" }, { "db_name": "UniProt", "db_id": "Q8HXW7" } ] }, { "id": "DS.d93.s0.e1", "type": "compound", "text": [ "cocaine" ], "offsets": [ [ 203, 210 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "2826" }, { "db_name": "PubChem", "db_id": "5760" }, { "db_name": "PubChem", "db_id": "439497" }, { "db_name": "PubChem", "db_id": "446220" }, { "db_name": "PubChem", "db_id": "644017" }, { "db_name": "PubChem", "db_id": "54613779" } ] } ]
[]
[]
[ { "id": "DS.d93.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d93.s0.e1", "arg2_id": "DS.d93.s0.e0", "normalized": [] } ]
DS.d94
18359113
[ { "id": "DS.d94.s0", "type": "", "text": [ "No correlation was detected between serum leptin level and vitamin D-25(OH)D3, which was under normal range in 60% of the patients." ], "offsets": [ [ 0, 131 ] ] }, { "id": "DS.d94.s1", "type": "", "text": [ "The higher leptin levels in women was accompanied by higher serum levels of glucose, albumin, Ca, cholesterol, Na and FT4." ], "offsets": [ [ 132, 254 ] ] }, { "id": "DS.d94.s2", "type": "", "text": [ "Comparison of 50 patients with the lowest leptin levels (mean of 3.4ng/ml) to 50 patients with highest leptin levels (mean of 34ng/ml), did not indicate differences in both 25(OH)D3 and ICTP between these two populations in spite of the highly significant difference in leptin levels." ], "offsets": [ [ 255, 539 ] ] } ]
[ { "id": "DS.d94.s0.e0", "type": "protein", "text": [ "leptin" ], "offsets": [ [ 42, 48 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O02750" }, { "db_name": "UniProt", "db_id": "O93416" }, { "db_name": "UniProt", "db_id": "Q28603" }, { "db_name": "UniProt", "db_id": "Q95189" }, { "db_name": "UniProt", "db_id": "Q95234" } ] }, { "id": "DS.d94.s0.e1", "type": "compound", "text": [ "vitamin D" ], "offsets": [ [ 59, 68 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5280795" } ] }, { "id": "DS.d94.s1.e0", "type": "protein", "text": [ "leptin" ], "offsets": [ [ 143, 149 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O02750" }, { "db_name": "UniProt", "db_id": "O93416" }, { "db_name": "UniProt", "db_id": "Q28603" }, { "db_name": "UniProt", "db_id": "Q95189" }, { "db_name": "UniProt", "db_id": "Q95234" } ] }, { "id": "DS.d94.s1.e1", "type": "compound", "text": [ "glucose" ], "offsets": [ [ 208, 215 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "206" }, { "db_name": "PubChem", "db_id": "5793" }, { "db_name": "PubChem", "db_id": "64689" }, { "db_name": "PubChem", "db_id": "79025" } ] }, { "id": "DS.d94.s1.e2", "type": "compound", "text": [ "cholesterol" ], "offsets": [ [ 230, 241 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "304" }, { "db_name": "PubChem", "db_id": "5997" }, { "db_name": "PubChem", "db_id": "6432564" }, { "db_name": "PubChem", "db_id": "11025495" } ] }, { "id": "DS.d94.s1.e3", "type": "compound", "text": [ "Na" ], "offsets": [ [ 243, 245 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "923" }, { "db_name": "PubChem", "db_id": "373840" } ] }, { "id": "DS.d94.s2.e0", "type": "protein", "text": [ "leptin" ], "offsets": [ [ 297, 303 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O02750" }, { "db_name": "UniProt", "db_id": "O93416" }, { "db_name": "UniProt", "db_id": "Q28603" }, { "db_name": "UniProt", "db_id": "Q95189" }, { "db_name": "UniProt", "db_id": "Q95234" } ] }, { "id": "DS.d94.s2.e1", "type": "protein", "text": [ "leptin" ], "offsets": [ [ 358, 364 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O02750" }, { "db_name": "UniProt", "db_id": "O93416" }, { "db_name": "UniProt", "db_id": "Q28603" }, { "db_name": "UniProt", "db_id": "Q95189" }, { "db_name": "UniProt", "db_id": "Q95234" } ] }, { "id": "DS.d94.s2.e2", "type": "compound", "text": [ "25(OH)D3" ], "offsets": [ [ 428, 436 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5283731" } ] }, { "id": "DS.d94.s2.e3", "type": "protein", "text": [ "leptin" ], "offsets": [ [ 358, 364 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O02750" }, { "db_name": "UniProt", "db_id": "O93416" }, { "db_name": "UniProt", "db_id": "Q28603" }, { "db_name": "UniProt", "db_id": "Q95189" }, { "db_name": "UniProt", "db_id": "Q95234" } ] } ]
[]
[]
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DS.d95
18363836
[ { "id": "DS.d95.s0", "type": "", "text": [ "The effects on the early secretory pathway in HEK293 cells were: reduction of the rate of ER-to-Golgi transport of the vesicular stomatitis virus glycoprotein (VSVG), slowed accumulation of a Golgi marker plasmid in pre-Golgi structures after Brefeldin A treatment and inhibition of cargo concentration of the neuronal glutamate transporter excitatory amino-acid carrier 1 (EAAC1) into transpor complexes in HEK293 cells, an effect that could be completely reversed in the presence of an excess of Rab1." ], "offsets": [ [ 0, 503 ] ] } ]
[ { "id": "DS.d95.s0.e0", "type": "protein", "text": [ "glycoprotein" ], "offsets": [ [ 146, 158 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P08163" } ] }, { "id": "DS.d95.s0.e1", "type": "compound", "text": [ "Brefeldin A" ], "offsets": [ [ 243, 254 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "5287620" } ] }, { "id": "DS.d95.s0.e2", "type": "protein", "text": [ "excitatory amino-acid carrier 1" ], "offsets": [ [ 341, 372 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P31597" }, { "db_name": "UniProt", "db_id": "P43005" }, { "db_name": "UniProt", "db_id": "P51906" }, { "db_name": "UniProt", "db_id": "P51907" }, { "db_name": "UniProt", "db_id": "Q95135" } ] }, { "id": "DS.d95.s0.e3", "type": "protein", "text": [ "EAAC1" ], "offsets": [ [ 374, 379 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P31597" }, { "db_name": "UniProt", "db_id": "P43005" }, { "db_name": "UniProt", "db_id": "Q95135" } ] }, { "id": "DS.d95.s0.e4", "type": "protein", "text": [ "Rab1" ], "offsets": [ [ 498, 502 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P62821" }, { "db_name": "UniProt", "db_id": "Q4UB16" }, { "db_name": "UniProt", "db_id": "Q6NYB7" }, { "db_name": "UniProt", "db_id": "Q9TVU5" } ] } ]
[]
[]
[]
DS.d96
18367388
[ { "id": "DS.d96.s0", "type": "", "text": [ "Resveratrol did not attenuate GA-induced generation of hydrogen peroxide, but it did block GA-induced phosphorylation of connexin 43 (Cx43), a key modulator of GJIC." ], "offsets": [ [ 0, 165 ] ] }, { "id": "DS.d96.s1", "type": "", "text": [ "Furthermore, resveratrol down-regulated GA-induced phosphorylation of extracellular signal-regulated kinase (ERK)1/2, one of the critical regulators of Cx43." ], "offsets": [ [ 166, 323 ] ] } ]
[ { "id": "DS.d96.s0.e0", "type": "compound", "text": [ "Resveratrol" ], "offsets": [ [ 0, 11 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "445154" } ] }, { "id": "DS.d96.s0.e1", "type": "compound", "text": [ "hydrogen peroxide" ], "offsets": [ [ 55, 72 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "784" } ] }, { "id": "DS.d96.s0.e2", "type": "protein", "text": [ "connexin 43" ], "offsets": [ [ 121, 132 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O57474" }, { "db_name": "UniProt", "db_id": "P08050" }, { "db_name": "UniProt", "db_id": "P14154" }, { "db_name": "UniProt", "db_id": "P16863" }, { "db_name": "UniProt", "db_id": "P17302" }, { "db_name": "UniProt", "db_id": "P18246" }, { "db_name": "UniProt", "db_id": "P23242" }, { "db_name": "UniProt", "db_id": "Q29101" }, { "db_name": "UniProt", "db_id": "Q6S9C0" } ] }, { "id": "DS.d96.s0.e3", "type": "protein", "text": [ "Cx43" ], "offsets": [ [ 134, 138 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O57474" }, { "db_name": "UniProt", "db_id": "P08050" }, { "db_name": "UniProt", "db_id": "P14154" }, { "db_name": "UniProt", "db_id": "P16863" }, { "db_name": "UniProt", "db_id": "P17302" }, { "db_name": "UniProt", "db_id": "P18246" }, { "db_name": "UniProt", "db_id": "P23242" }, { "db_name": "UniProt", "db_id": "Q29101" }, { "db_name": "UniProt", "db_id": "Q6S9C0" } ] }, { "id": "DS.d96.s1.e0", "type": "compound", "text": [ "resveratrol" ], "offsets": [ [ 179, 190 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "445154" } ] }, { "id": "DS.d96.s1.e1", "type": "protein", "text": [ "ERK" ], "offsets": [ [ 275, 278 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P29323" } ] }, { "id": "DS.d96.s1.e2", "type": "protein", "text": [ "Cx43" ], "offsets": [ [ 318, 322 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O57474" }, { "db_name": "UniProt", "db_id": "P08050" }, { "db_name": "UniProt", "db_id": "P14154" }, { "db_name": "UniProt", "db_id": "P16863" }, { "db_name": "UniProt", "db_id": "P17302" }, { "db_name": "UniProt", "db_id": "P18246" }, { "db_name": "UniProt", "db_id": "P23242" }, { "db_name": "UniProt", "db_id": "Q29101" }, { "db_name": "UniProt", "db_id": "Q6S9C0" } ] } ]
[]
[]
[ { "id": "DS.d96.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d96.s0.e0", "arg2_id": "DS.d96.s0.e3", "normalized": [] }, { "id": "DS.d96.s0.i3", "type": "compound-protein-interaction", "arg1_id": "DS.d96.s0.e0", "arg2_id": "DS.d96.s0.e2", "normalized": [] }, { "id": "DS.d96.s1.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d96.s1.e0", "arg2_id": "DS.d96.s1.e1", "normalized": [] }, { "id": "DS.d96.s1.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d96.s1.e0", "arg2_id": "DS.d96.s1.e2", "normalized": [] } ]
DS.d97
18368465
[ { "id": "DS.d97.s0", "type": "", "text": [ "DFMO accumulated cells in S phase of the cell cycle and reduced cyclin A expression." ], "offsets": [ [ 0, 84 ] ] } ]
[ { "id": "DS.d97.s0.e0", "type": "compound", "text": [ "DFMO" ], "offsets": [ [ 0, 4 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "3009" } ] }, { "id": "DS.d97.s0.e1", "type": "protein", "text": [ "cyclin A" ], "offsets": [ [ 64, 72 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "P20248" }, { "db_name": "UniProt", "db_id": "P30274" }, { "db_name": "UniProt", "db_id": "P37881" }, { "db_name": "UniProt", "db_id": "P43449" }, { "db_name": "UniProt", "db_id": "P51943" }, { "db_name": "UniProt", "db_id": "Q92161" } ] } ]
[]
[]
[ { "id": "DS.d97.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d97.s0.e0", "arg2_id": "DS.d97.s0.e1", "normalized": [] } ]
DS.d98
18368485
[ { "id": "DS.d98.s0", "type": "", "text": [ "Indeed, treatment of cells with 1 muM all-trans retinoic acid (ATRA) or 1 muM 13-cis retinoic acid (13-CRA) for 7 days induced astrocytic differentiation with upregulation of glial fibrillary acidic protein (GFAP) and down regulation of telomerase activity." ], "offsets": [ [ 0, 257 ] ] }, { "id": "DS.d98.s1", "type": "", "text": [ "Wright staining and ApopTag assay showed, respectively, morphological and biochemical features of apoptosis in glioblastoma cells following exposure to 200 units/ml IFN-gamma for 48 h. Induction of differentiation was associated with decreases in levels of nuclear factor kappa B (NFkappaB), inducible nitric oxide synthase (iNOS), and production of nitric oxide (NO) so as to increase sensitivity to IFN-gamma for apoptosis." ], "offsets": [ [ 258, 683 ] ] } ]
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"db_name": "UniProt", "db_id": "O61608" }, { "db_name": "UniProt", "db_id": "Q27571" }, { "db_name": "UniProt", "db_id": "Q9I9M2" } ] }, { "id": "DS.d98.s1.e2", "type": "protein", "text": [ "iNOS" ], "offsets": [ [ 583, 587 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O19114" }, { "db_name": "UniProt", "db_id": "O46660" }, { "db_name": "UniProt", "db_id": "O54705" }, { "db_name": "UniProt", "db_id": "O62699" }, { "db_name": "UniProt", "db_id": "P29477" }, { "db_name": "UniProt", "db_id": "P35228" }, { "db_name": "UniProt", "db_id": "P79290" }, { "db_name": "UniProt", "db_id": "Q06518" }, { "db_name": "UniProt", "db_id": "Q27995" }, { "db_name": "UniProt", "db_id": "Q28314" }, { "db_name": "UniProt", "db_id": "Q90703" }, { "db_name": "UniProt", "db_id": "Q92037" }, { "db_name": "UniProt", "db_id": "Q92091" } ] }, { "id": "DS.d98.s1.e3", "type": "compound", "text": [ "nitric oxide" ], "offsets": [ [ 560, 572 ] ], "normalized": [ { "db_name": "PubChem", "db_id": "145068" } ] }, { "id": "DS.d98.s1.e4", "type": "protein", "text": [ "IFN-gamma" ], "offsets": [ [ 659, 668 ] ], "normalized": [ { "db_name": "UniProt", "db_id": "O35497" }, { "db_name": "UniProt", "db_id": "O35735" }, { "db_name": "UniProt", "db_id": "O57571" }, { "db_name": "UniProt", "db_id": "O57603" }, { "db_name": "UniProt", "db_id": "O57608" }, { "db_name": "UniProt", "db_id": "O73915" }, { "db_name": "UniProt", "db_id": "O77763" }, { "db_name": "UniProt", "db_id": "P01579" }, { "db_name": "UniProt", "db_id": "P01580" }, { "db_name": "UniProt", "db_id": "P01581" }, { "db_name": "UniProt", "db_id": "P07353" }, { "db_name": "UniProt", "db_id": "P17773" }, { "db_name": "UniProt", "db_id": "P17803" }, { "db_name": "UniProt", "db_id": "P28333" }, { "db_name": "UniProt", "db_id": "P28341" }, { "db_name": "UniProt", "db_id": "P30123" }, { "db_name": "UniProt", "db_id": "P42160" }, { "db_name": "UniProt", "db_id": "P42161" }, { "db_name": "UniProt", "db_id": "P42162" }, { "db_name": "UniProt", "db_id": "P46402" }, { "db_name": "UniProt", "db_id": "P49708" }, { "db_name": "UniProt", "db_id": "P63309" }, { "db_name": "UniProt", "db_id": "P63310" }, { "db_name": "UniProt", "db_id": "P63311" }, { "db_name": "UniProt", "db_id": "P79154" }, { "db_name": "UniProt", "db_id": "Q1WM28" }, { "db_name": "UniProt", "db_id": "Q25BC0" }, { "db_name": "UniProt", "db_id": "Q2PE75" }, { "db_name": "UniProt", "db_id": "Q4ZH68" }, { "db_name": "UniProt", "db_id": "Q5CCK0" }, { "db_name": "UniProt", "db_id": "Q5I6S9" }, { "db_name": "UniProt", "db_id": "Q62574" }, { "db_name": "UniProt", "db_id": "Q647G2" }, { "db_name": "UniProt", "db_id": "Q7TSP4" }, { "db_name": "UniProt", "db_id": "Q865W6" }, { "db_name": "UniProt", "db_id": "Q865X1" }, { "db_name": "UniProt", "db_id": "Q865Y4" }, { "db_name": "UniProt", "db_id": "Q866Y6" }, { "db_name": "UniProt", "db_id": "Q8MKF5" }, { "db_name": "UniProt", "db_id": "Q8SPW9" }, { "db_name": "UniProt", "db_id": "Q9QXX2" }, { "db_name": "UniProt", "db_id": "Q9TTB0" }, { "db_name": "UniProt", "db_id": "Q9TV67" }, { "db_name": "UniProt", "db_id": "Q9YGB9" } ] } ]
[]
[]
[ { "id": "DS.d98.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d98.s0.e0", "arg2_id": "DS.d98.s0.e3", "normalized": [] }, { "id": "DS.d98.s0.i1", "type": "compound-protein-interaction", "arg1_id": "DS.d98.s0.e2", "arg2_id": "DS.d98.s0.e4", "normalized": [] }, { "id": "DS.d98.s0.i2", "type": "compound-protein-interaction", "arg1_id": "DS.d98.s0.e0", "arg2_id": "DS.d98.s0.e4", "normalized": [] }, { "id": "DS.d98.s0.i3", "type": "compound-protein-interaction", "arg1_id": "DS.d98.s0.e1", "arg2_id": "DS.d98.s0.e3", "normalized": [] }, { "id": "DS.d98.s0.i4", "type": "compound-protein-interaction", "arg1_id": "DS.d98.s0.e2", "arg2_id": "DS.d98.s0.e3", "normalized": [] }, { "id": "DS.d98.s0.i5", "type": "compound-protein-interaction", "arg1_id": "DS.d98.s0.e1", "arg2_id": "DS.d98.s0.e4", "normalized": [] } ]
DS.d99
18371961
[ { "id": "DS.d99.s0", "type": "", "text": [ "Because annexin V binds phosphatidylserine, this study is using this feature to select functional spermatozoa." ], "offsets": [ [ 0, 110 ] ] } ]
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[]
[]
[ { "id": "DS.d99.s0.i0", "type": "compound-protein-interaction", "arg1_id": "DS.d99.s0.e1", "arg2_id": "DS.d99.s0.e0", "normalized": [] } ]