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--- |
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language: |
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- en |
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bigbio_language: |
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- English |
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license: other |
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multilinguality: monolingual |
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bigbio_license_shortname: NCBI_LICENSE |
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pretty_name: PubTator Central |
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homepage: https://www.ncbi.nlm.nih.gov/research/pubtator/ |
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bigbio_pubmed: True |
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bigbio_public: True |
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bigbio_tasks: |
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- NAMED_ENTITY_RECOGNITION |
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- NAMED_ENTITY_DISAMBIGUATION |
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--- |
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# Dataset Card for PubTator Central |
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## Dataset Description |
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- **Homepage:** https://www.ncbi.nlm.nih.gov/research/pubtator/ |
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- **Pubmed:** True |
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- **Public:** True |
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- **Tasks:** NER,NED |
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PubTator Central (PTC, https://www.ncbi.nlm.nih.gov/research/pubtator/) is a web service for |
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exploring and retrieving bioconcept annotations in full text biomedical articles. PTC provides |
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automated annotations from state-of-the-art text mining systems for genes/proteins, genetic |
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variants, diseases, chemicals, species and cell lines, all available for immediate download. PTC |
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annotates PubMed (30 million abstracts), the PMC Open Access Subset and the Author Manuscript |
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Collection (3 million full text articles). Updated entity identification methods and a |
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disambiguation module based on cutting-edge deep learning techniques provide increased accuracy. |
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## Citation Information |
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``` |
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@article{10.1093/nar/gkz389, |
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title = {{PubTator central: automated concept annotation for biomedical full text articles}}, |
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author = {Wei, Chih-Hsuan and Allot, Alexis and Leaman, Robert and Lu, Zhiyong}, |
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year = 2019, |
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month = {05}, |
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journal = {Nucleic Acids Research}, |
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volume = 47, |
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number = {W1}, |
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pages = {W587-W593}, |
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doi = {10.1093/nar/gkz389}, |
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issn = {0305-1048}, |
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url = {https://doi.org/10.1093/nar/gkz389}, |
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eprint = {https://academic.oup.com/nar/article-pdf/47/W1/W587/28880193/gkz389.pdf} |
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} |
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``` |
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