Dataset Viewer
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id
stringlengths 12
23
| sequence
stringlengths 33
489
| secondary_structure
stringlengths 33
489
|
---|---|---|
AACY020454584.1_604
|
ACUGGUUGCGGCCAGUAUAAAUAGUCUUUAAGCCGCAAGCGUGUCCUGGAGUUAAUCUUCCAGGGCGGUAGCA
|
((((........)))).........((..............(((((((((........)))))))))..))..
|
AACY021048934.1_360
|
GCUCGGUGCGGCGAGCCUAAAUAGUGCCUUAGGCCGCACGCGUUAUGCAUAGGUGGCA
|
((((........))))........((((..............((((()))))..))))
|
AACY021109846.1_859
|
GGGGGACGAAGUCGAACUGAACACCUCCAUCGUGGUGUCCCCCGGGCAACGCUUGCAAAAGCGGCUAACGUUCAG
|
(((((((...............(((........))))))))))......(((((....)))))............
|
AACY021449234.1_672
|
AUCUCACAACGUUAAUCGCCUCCUCGUGGCGUGAGAUGGAAACAGCAUAUUUGCAAAUAUGUUGGCUAAGAUUAACAG
|
(((((((..........(((.......)))))))))).....(((((............)))))..............
|
AACY021702793.1_630
|
ACAUUUUGUGGUUUUAAGGGUUAAUCCUUAAGGUUGAUAAACCUUGACAAGCCUAUGGGGCUACUAUAGUAUUCUCUUAUUACGGGUAAGAGUAUCAAGCAUAAGCGAAAUUCCGUGCUUAUGUAAUGCUAAGUUAGUGCAGACUUAAAAAUUAGGC
|
...........................((((((........))))))...(((((....(((....(((((((.(...............................................).)))))))....)))..............)))))
|
AACY022661277.1_934
|
ACUGGACUACGCCAGUAUAAAUAGGCAUUAAGCGUAGUGCGUUCCAAUGUUGUGAAACAUCGGAGGUUGUU
|
((((........)))).......((((..............((((.((((......)))).))))..))))
|
AACY022753348.1_678
|
AGUCGACUAAGCGACUCUAAACAGCAUUUAGGCUUAGUGCGUUCCCCUGCUCACGCGGGGGAGGUAUGG
|
((((........))))........(((..............(((((((((....)))))))))..))).
|
AACY020454254.1_1909
|
AGUCGUUUGGGCGACUAUAAACAGACGAAUAAGCCCAAAGCGUUUCCUCGUAAGAGGAAGGACGGA
|
((((........)))).........((...............(((((((....)))))))..))..
|
AACY020454584.1_1474
|
ACUCGUCUGAGCGAGUAUAAAUAGGCUUUUGGCUCAGAGCGAUUCCUGGAGCGCUGUUUCCAGGGAUGUAGCA
|
((((........))))........(((..............(((((((((........)))))))))..))).
|
AACY020496190.1_1503
|
AGUCGUCUAAGCGACUCUAAAAAGGCUUUAAGCUUAGAGCGUUCGCCCAUAUUGGGCGAGGUUGUA
|
((((........))))........((...............(((((((.....)))))))...)).
|
AACY023396520.1_1459
|
AGUCGGUAGAGCGACUUUAAAAAGGCAUUAGGCUCUACGCGUUCCAGGAGGAAACUCCUGGAGGUUGUU
|
((((........)))).......((((..............(((((((((....)))))))))..))))
|
AACY023459782.1_1089
|
UGAUGAGGGGCGGGGGGCCAGAGACCCCCCGUUAAAUCGCCAUGUCAACCGACAUGCUGGUCCCAAGCCCAG
|
.(((.....((((((...........))))))...)))..................(((..........)))
|
AACZ03123677.1_4633
|
GACAGGAGGAAACGCAGCGCCAGCAGCAUCUCAUCUACCCUCCUUGACACCUCCUCCCCGUGGCUCCAGCCAGACCCUAGAGGUCAGCCUUGCGGACCAACAGGAGGACUCCCAGCUUUCCCUUUUCAAGAGGUCCCCAGACACCGGCCACCCUCUUCCAGCCCCUGCGGCCAGUGCAAGGAGGCACCAAUGCUCUGAGGCUGUCGCGUGGUGCAGCGUCGAGCAUCCUCGCCGAGGUCCUUUCUGCUGCCUGUCCCGCCUCACCCCGCUCCAUCACACCAGCUGGCCCUCUUUGCUUCCUUUUCCCAGAAUCGUUAAGCCCCGACUCCCACUAGCACCUCGUACCAACCUCGCCCCACCCCAUCCUCCUGCCUUCCCGCGCUCCGGUGUCCCCCGCUGCCAUG
|
..((((((((...((((.((.(((((............((((((((.(((..........(((((.(((.........(((((...((((((.(((((...((((((.............)))))).....))))).))).....)))...)))))........))).)))))))))))))))).....((((((.((.((((.(((...))))))).))))))))((((...))))......)))))))))))..........((.(((..........))).))......................((.(((........))).))......((................)).........)))))))).........((..(((......)))..))....
|
AAGJ04114413.1_2461
|
AGGGAGGGAGGGGUAUUGGAACCAAACCUCUUAACCAACCGUCGCCCGUCCCAAGUCGGG
|
.((.....((((((...........))))))...))........(((..........)))
|
AAJM01000018.1_9079
|
UGUGUUUCACUCCUUUUACAUGUAUUGUAAACCUUCACACUAAUGUGAAGG
|
.............((((.(((((...................)))))))))
|
AAKY01000063.1_80713
|
CACUUCAUCUUUCAUCUUUGCACACCCGAAUUCCGCAGGGUUUUUCAAGUACCAGAGGUAGCCGGUUGCCGCGUGACGAAGGGAACAAAUCGACCAAAGAAGCGAGGACGGUCAUGCGAUCUGCCCGGAUUGCACUGAUGCUGACGAUCGUGCUUGCCGGUCCGUAUGCGUCGAACUUCGCGUAUGCGCAGCGCCCCGAGCAGGGCGCAUCGUCGCGCAA
|
................((((....(((...((.(((..(((...((...((((...))))...))..)))..)))..)).)))..)))).((.(.....(.(((((..(.((.....((((.((...(....(..(......)..)....)....)).)))).....))...)..).)))).)..(((..(((((........)))))..))).)))...
|
AALC02000098.1_4036
|
GAGAUCAAAGAAUCACCCUCGGUUGUUGGUUAAAUUAUUAUCUUGUCAAUCAGGAUUUUGGCGAAAUCUAAUGCUGUUAAACACCCGAUAAAUCAAUCAAUUCAAUAGUGAUAAUGGAGAGGAUGAUGAGUAAAAAGAAAGGGUUAACUACCGCA
|
.........((((.......(..(((((.(.(.......((..((((((........))))))..)).........).)......)))))..)......))))....((.((..(.......)..))..)).........((.....))......
|
AAQB01006145.1_104686
|
AGCACCAAAAUCAGUAACCAAGCGAAUGCUAAACUAGCUUGGGGACUACGCUUGGGUGCUCAAAUUGAUUUAACCGCUCGCUAUAAUGCCAAACAUAACAUUAAGAGCAUAACCUAAUCCUCGCUAUGCUUGUGGCCCUGUUUCGAGACAC
|
((((((......(((..((((((.............))))))..))).......)))))).........(.......(((..(((..((((.............((((((..(.........)..)))))).))))..)))..))))....
|
AAWL01000017.1_25112
|
AUAAUACAACAGGAACAGGCGGCUGCCGCGAGGCAGUGCAGCCGGGCGUUUGCAGCAGAAAGGCUCUGCGGGACCUGC
|
.........((((.....((.(((((......)))))...))...((....)).(((((.....)))))....)))).
|
AAXW01000073.1_3077
|
UCUAAAAUCGUGUGAUUUCGGUAUCUCCCAUUGAUAUUGAGUUCUCCUAGAAUACCUCGGUGAUGCGCCGAGGUUUUU
|
.....................................................((((((((.....))))))))....
|
AAYW02000017.1_89779
|
ACAGUACAAACUGAGCAGGCGGUGGGAUGACCACAGGGCCGGGCCACACAGGGUGGCAGCAGAUAAAGAAUGAAUUUAUGAUCUGCGGGACAGUA
|
.........((((.....((.((((.....))))...))...(((((.....))))).(((((..................)))))....)))).
|
ABBG01000012.1_1114
|
AAAUGCGCUACGGGGAACGAUAAAAACAGCGCGGGGGUAGCGUUGCUGGCACGCGUUCAGCGUGUCGGCAGCGGUUGUCUGCAUGCACGACGGGGCCAACCACCACAACAAACCAACAUGCAGGCACAUACGCCUAUUCAAUCGACGUUCCGCCGUCCGGCCGGGGGAAGCAGAGGUCAAUGCGGGCGGCGGCGGACGCAUUUUUUAC
|
(((((((((.((.(...............).)).))....((((((((((((((.....))))))))))))))..((((((((((.......((........))............))))))))))...(((.(.((...)).).)))(((((((.(((.(((.(...............).))).))))))))))))))))).....
|
ABFK02000017.1_466353
|
AGCCGUUCGGGCGGCUAUAAACAGACCUCAGGCCCGAAGCGUGGCGGCACCUGCCGCCGGUGGUA
|
((((........))))........(((..............(((((((....)))))))..))).
|
ABLN01000435.1_3857
|
GUCGACUGGUCAGAGGCUUUCUGUACAAGGUCAGACAGUAUCCCACCCGGCCCACUAGUGAAACUGGUUCAAUCCCAGUAUCGCGCACCACGAUUGACCUGCGGUUUCAUCCACAAAAUCUGGGCUGCGUGAACUAAAUGUGAACUGACUCGGUGCAACCACCGAAAGGUUCCU
|
((((.(((..((((.....))))..)).).)..))).......(((.(((((((...(((((((((..((((((...((.......))...))))))....)))))))))..........))))))).)))..........(((((...((((((....))))))..)))))..
|
ABLX01143204.1_55
|
ACUCGACAGGGCGAGGCUAAAUAGCAUUUAGGCCCUGAGCGGCUCCCUUCGGGAG
|
.(((........)))...........................(((((...)))))
|
ABLZ01250225.1_97
|
AGUCGUUAGGGCGACUAUAAACAGACAUUAAGCCCUAAGCGUCCCCUACUAGCUAGGGGGGUUGUA
|
((((........))))........(((..............(((((((.....)))))))..))).
|
ABMG01007509.1_2
|
GGUGAGCGGCCCCGCCCGUAAGGACGGGGACUAAACCACAAGUCCGGUCGCAAGUCCGG
|
(((.....((((((..........))))).)...)))......(((..........)))
|
ABNK01016853.1_25
|
AGUCGUCUGAGCGACUAUAAACAGAGUUUUAGGCUCAGAGCGCCUCCCCUUCGGGGGAGGGUACUA
|
((((........))))........(((...............(((((((....)))))))..))).
|
ABPA01000012.1_259180
|
ACACUCGACCAGAUUUUUUUGAUUUUCGAUUUCCAAACGCGAUUUAUUCCAAUCCGCCUUGUAGCAGACUAACCGGUGCACUUUUGCACGUGUACGCAAGAC
|
....((((..(((((.....))))))))).........(((...........((.((......)).)).......(((((....))))).....))).....
|
ABPY01006745.1_33
|
ACAGGUUUGCGCCUGUAUAAAUAGACAUUAAGCGCAAAGCGUCCCGCAAUUGUUGCGGGGGUUGUA
|
((((........))))........(((..............(((((((.....)))))))..))).
|
ABPY01006745.1_722
|
GCUGGUCACGGCCAGUAUAAACAGACAUUAAGCCGUGAGCGUCUCCUGUUCUGUGAACGGGAGGGUUGUA
|
((((........))))........(((..............(((((((((.....)))))))))..))).
|
ABQR01000046.1_117420
|
ACAGUACAAUCUGAUCAGGCCUUAAAGUGGAUGGAACGGAACAUCCAUGGAGGAGCCGGGCCGCUUUAGCGGCAGCAGGUAGGAAACACCUGCGGGACAGUC
|
..........(((.....((.((.(......................).))...))...(((((....))))).(((((.........)))))....)))..
|
ABSH01000027.1_84172
|
CAUCGCGAUGCUCUUCAGAGAUGGAGAAAUCGUGAUGAGGAUACUUUCAAAGCCCCAACUGAAGGAGUUGGUUUUGUACUCGCCGCAACAUGUCGCACGUCUGGAAAAGGCAGGCCUAUUCCCCAAGCGGGUACAGCUGGGCCCGAACAGAGUGGGAUGGGUCGAAGAUGAAGUGCUGGACUGGCUACAAACACGGAUGGAGGGUCGCGAGGAGGCCUGACCGACACUCCUCAUGUAGGAGUAUGGGUGGCCGGAGGUGCACACUUC
|
(((((((((..((((((....)))))).))))))))).................(((.((...(.(((((((((..(((((((..(.((.((((.(((..(((.....(((.(((.....(((.....)))....)))..)))....))).))).)))).)).)..).)).))))..))))))))).)......)).)))..((((((............(((...(((((.....)))))..))))))))).(((.......))).
|
ABSK01000052.1_27956
|
AUUGCGAGGACUUUAGCAAUGUAGGGGAUGAGCGGCAAAUUCAGGAUCAACAACACAAGGUUGCCGAUGAACAUCGACAUAAUGACCGCCCAGAAAAUCUGUGGAUCGUCAAUCAUCAGGCGUGGGCC
|
..(((.((....)).))).......((.(.(.((.(..((..(.((((.(((........(((........(((.......)))......)))......))).)))).)..)).....).))).).))
|
ABSN01019877.1_251
|
CGCAGAUGACGGUGCCACCACGGCACCGUAAUGCGACAAGCAGGUUCCAAUCCCUG
|
((((.....((((((.......))))))...)))).....(((..........)))
|
ABVR01000037.1_34959
|
GCUGCUCGAAUGAAUCACACACCUCUUUGUGGUGAGUAGCAGGCAACGAUCUAAGAAUCAGGGAUCCGGUGAUCGGCUGAGAUGUGAAG
|
(((((((.............(((.......))))))))))......(((((...................)))))..............
|
ABYA01000314.1_2329
|
AGUUCCGGUGCGGUCGGCGCCUUUCCCAAGAAACGCGAGAGGGAAAUGACCCCCCACCGAACCCACCCUUUCCCGCCCGGGACCUGCGCUCACUCGGGCGGGUGGACAUCACCGCUCGGCCGGCUUUUCGGGUGCCCCGCGGCUUUACGCUCAGCGCACACCACCGCAGAAAAGACUUCGGCCCCCGCCGGGACUGGCAUCCCAGUGCGAGGGCCUGACCACCAAGGAAGACGAGACCUUCCCG
|
......((((.....((((......................................................))))............((((((....))))))...............(.(............................).).........................(((((.(((.((((......))))...))).)))))....))))..(((((.......)))))..
|
ABYI02000012.1_66005
|
GCGGUACAAACUGAGCAGGCGAUGGAUCUUGUGUGAUCAGGUCCGUGGGGCCGGGCCGUUUUCGGCAGCGGAUGCAUGGCAUCCGCGGGACAGUA
|
.........((((.....((.(((((...............)))))...))...((((....)))).(((((.........)))))....)))).
|
AB546780.1_10221
|
AUCUUAAAUAGAAAGAGGGUUUGCAUAUGGACUUCACUGGUGUUAUUACAAGCAUUAUUGAUUUAAUCAAGACUUGCAUUCAGACUUUCGGUUAAGUUUUUUGUUUCAACGCAAUAAAAAAACAGAGGAAAUAUUCAACAAUUUGAUUGUUUC
|
......(((.(((((...(..((((....((.((((.(((((((......))))))).)))...).))......))))..)...))))).)))..................................((((((.((((....)))).))))))
|
ACCA01000039.1_31556
|
CGCCAUAUCAGUGAUAUGGUUGUUGUGUUAGAUAUUGUUAUAAUGAUCCGGAUGAUUUUUAUGAAAAAGACAUUAUUGGCCAGUUCUUUG
|
.(((((.........)))))..........((((.((((((((.((((.....)))).))))))......)).)))).............
|
ACCB01000005.1_85822
|
CUAUCUGAGUCUGGGGCCAAUAGGUUUGCAGCAAUGCUCUGGUCGCCGUAAUACCGGCCUUUAAUGACUAUUAAUACAGACCUGAUAAUCAUAUUCACUGAUGACGUCAAAAGGGUUCUUAUGACACAACAGCCGCAAGUCAAAUACCGU
|
...((((.((..(((((.....(((...................))).........))))..........)..)).)))).................(((.((..((((...((....)).)))).)).)))..................
|
ACCC01000032.1_17493
|
AACCUAAUGUUGGUUAAUGCUACAUCAACUAGGUAGACACAAUCCUUUGGAGUAGAACAUGAGCGAUAAAAUUAUUCAUCUGAGUGAC
|
.......(((((.(((...((((.(((...(((..........))).))).))))....))).)))))...((((((....)))))).
|
ACCJ01000536.1_4231
|
CGCAGAGCAACGGGGCAGCAAUGCCCCGGUAAUGCGGGGGAACGGUUGCAACCCCGU
|
((((......(((((........)))))....)))).....(((..........)))
|
ACCJ01000322.1_14085
|
AUGGCAUAAAGGAAACAGGCCGCGGGCGGCAGCGCGCGGGCCGGGCCGCAUUAGCGGCAGCAGGUGGAUCAGGCGGCAUCUGCGGGACAAUG
|
.........(........((((((.(......).))).)))...(((((....))))).(((((..............))))).......).
|
ACCL02000009.1_43428
|
ACAGUACAAACUGAGCAGACCGUAACAGUCCGUUAUGGAGUCGGGUCACAUGCGUGACAGUGGAAAUGUUCAUCCACGGGACAGUU
|
.........((((.....((.(((((.....)))))...))...(((((....))))).(((((........)))))....)))).
|
ACEY01000129.1_49787
|
GGUUCCGGUGCCGUCGGUGCCCUACCAAGACAAGAAACCGGGGGAAAUGACCCCUACCAAGCCCCACCCCUCCCGCCCGAGGCGCUUCGUCACUCGGGCGGGUGAACAUCACCGUUUGAGCUGGAUUUCGGGGCCCUCAACUCCCCUACUCUCAGCGCAAACAAACACAUCUGAAAAGGCAUCGGCCCCCGCUGGGACUGGCAUCCCGGUGCGAGGGCCUAACCACCAAGGAAGAAGAGAGCUUCCCG
|
......((((.....((((......................................................))))............((((((....))))))..............(((((...........................)))))...........................(((((.(((.((((......))))...))).)))))....))))..(((((.......)))))..
|
ACEZ01000164.1_104333
|
CGCUCCGGUGCCGUCGGCGACUGAAAGGCGAAGAACCCCCGAGGGAAAGAACCCCUGCCAAGCCCCACCCCUCCCGCCCGCGUCCCGUGCUCACUCGCGCGGGUGAACCUCCCCGGACCGGCUGGAUUUCGCGGCCCUCGAGGCCCGACGCUCAGCCCAACGCACCACCACAACCGCAGACAUGCGACGGCCCCCGCCGGGACGGCAAUCCCAGUGCGAGGGCCUGACCACCGAGGAAGAUAGAGGCUUCCCG
|
......((((.....((((.......................................................))))............((((((....))))))..............(.(((..........................)))......)...........................(((((.(((.((((......))))...))).)))))....))))..(((((.......)))))..
|
ACFP01000103.1_1040
|
UUUGCCUCAAACACAAAGGUGUCAUCCCAGUGCUUGACACUGGGAUCCAGUAAAAUUGAUUGUGAACAAGCACACUAUACAACAUUUUCAAUGAAAUUACAAAAAAGCUGGAUUCCAGUGUCAAGCACUGGAAUGACACCAUUUGCUGUGCAAUUU
|
...........((((....((((((.((((((((((((((((((((((((.........................................................)))))))))))))))))))))))).))))))........))))......
|
ACIE02000035.1_129003
|
ACAGUACAGACUGAUCAGGUCAUAAGACCGGGCUGUUAAAAAAACAGCAGCAGAUGAAAUUAACAGCAUCUGUGGGACAAGUG
|
.........((((.....(((....)))...(((((.......))))).(((((..............)))))....)).)).
|
ACII01000060.1_3924
|
GCUGCUCAGAAAUGCACACUGCGACUGGUGAGCAGUAGGUGAUGUUUAUCAAAGGAUAAGCGGCUAAGAUGUAGAA
|
(((((((..........(((......))))))))))......(((((..........)))))..............
|
ACII01000103.1_12160
|
ACAGUACAAACUGAGCAGGCGAUGCCCGAGAUGCUUGAGGGCGUGGGGCCGGGCCGCGCGAAGCGGCAGCAGAUAUGAAAAUUUUCAGACAUAUCUGUGGGACAGUG
|
.........((((.....((.(((((.............)))))...))...(((((.....))))).(((((....................)))))....)))).
|
ACIO01000756.1_6332
|
ACAGUACAAACUGAGCAGGCAAUGUCUGAUCAUGCGACAUGAAGCCGGGCCGCUUCGGCGGCAGCAGAUGGGUAUCAGGCGCAUCUGUGGGACAGUA
|
.........((((.....((.(((((.........)))))...))...(((((....))))).(((((...............)))))....)))).
|
ACTP01000040.1_119838
|
ACAGUACAAACUGAGCAGGCUGUGUUUUCUGCCGGCGUAUGUAUUUCAAGCCGGAAAGGAUCCAUGGAUAGCCGGGCCGUUUUGACGGCAGCAGAUGGAGCUUACAUCUGUGGGACAGUA
|
.........((((.....(((.(((......................................)))...)))...(((((....))))).(((((...........)))))....)))).
|
ACUL01000219.1_9374
|
ACGGGUUUACCCCCGAAUCGAGCCUUGUGGUCUGUCCAGGCAUCAUUUAUAUGAGCCGCUCGAAUAACACUAAACUAAAAUCCAGGGUAAAC
|
....((((((((.....((((((....(((.....)))(((.((........))))))))))).....................))))))))
|
ACUP01006700.1_43239
|
GAAUUCUCUAAAAGAGAUCUUUUUCUGCUCUUUGAAGAAAGAAGGGUCUUUGCUUGAUUUUGGAGAUGUCUCUGCUCUCAGAUCU
|
....((((((((((((((((((((((.........))))..))))))))).......)))))))))....((((....))))...
|
ACWC01000004.1_40409
|
AGUCGUGGCGGCGACGUUAAAUAGGCAUUAAGCCGCCAGCGUUCCCCUCAUUGGGGAGGUUGCA
|
.(((........))).........(((..............((((((.....))))))..))).
|
ACXX02000003.1_385221
|
AAACUAUAAUUUAGAGCAGGCGAUGCAGCUGUAGACCUUUUAAGACAGUUGUGUGGGGCUGGGCCGAAACGGCAACAGGAUAUAAACCUGUGGGACUAAG
|
.........(.(((.....((.(((((......................)))))...))...((((...)))).(((((.......)))))....)))).
|
ACYV01000002.1_98152
|
UCGAUUUUAAGAUAACUUUACGUGGAUGGCUUUCUGCGUUUAUUUAUUAUUUAUAUAUCUUCAAAGUAGAACGCAAUG
|
((.(((((((((((.....(((((((......)))))))................)))))).))))).))........
|
ACYY01000023.1_29669
|
GUUUCUUGCUGAACCCCACCUCCUCCCGGGGUUUCUGGCAAACGCGGCGGCACUGAUCCUCCUCCCCAGUGCCGCCGCAGCUU
|
......((..(((((((..........))))))).)).......((((((((((.............))))))))))......
|
ACZG01000001.1_1182032
|
UUUGAUUUGCCCCACCAUUUCGAGCCUUGCAGCACAAGCUGGAUAUCCUUUUUGAGUGAAUCGCUCGACUAACACUAAACCAAAGAUAGGGCAAAU
|
....((((((((.......((((((....((((....))))(((.((..........)))))))))))....................))))))))
|
ACZG01000001.1_1258665
|
AUUGAUUUGCCCCCAAACAGAGCCUAGUGGCGCAAGCCUGGUAUCACUUUUGAGUGAACCGCUCGAUCAACACUAAACAAAAUCAGGGCAAGU
|
....((((((((.......((((.....(((....))).(((.((..........))))))))).....................))))))))
|
AC018761.6_48391
|
GGCCUCAAGUGAUGGAGAGCAAUACCCGGGGAUGACUGUGACCACAUUGGGAUGUAUUCGUACUGUCUGAUGGGGCC
|
(((((((...(((((...(((((((((.((..((........))..)).))..))))).)).)))))...)))))))
|
AC069351.5_37957
|
AGCUGAAGAGCUGAUGAUGUUCCCCUAAAGCUGAAGCUCUUAAGCU
|
((((.(((((((......................))))))).))))
|
ADAV01000062.1_11136
|
GAGGACAGAAGUUUCUCGCAAUUAAAAUUUAUCAGUUUUACUUUCUGCUCUCUGGAAACGCCUGCUUCUUUUUUCCCCGAGAGCAUUUUUUCGCAUUCCGAUUUGGUUAACUUUGUUUUUUGAGUACCUUGUCCAGUUAGUAGGAGUGCCACCUUCCUUUUCAAUAGUGGCGGUAAUUUU
|
.(((((.(((((((..........)))))..)).)))))..((((((((..(((((......((((.(((........)))))))....((((....(.((..........)).).....)))).......)))))..))))))))((((((..............))))))........
|
ADCZ01000007.1_276193
|
AUUCGACUAGACGAGUAUAAAUAGGUGUCAGGUCUAGUGCGGCAGGGUUCUUCCCUGCAUCAUA
|
((((........))))........(((..............((((((.....))))))..))).
|
ADCZ01000007.1_277655
|
AAUCGACUAGGCGAUUUUAAAUAGGUGUUAAGCCUAGUGCGGUAAGAGGUAUAACCCUCUUGCGUCACG
|
((((........))))........(((..............((((((((......))))))))..))).
|
ADDF011338994.1_3988
|
UGGGCAUGUGAUGUGACCUUCCUGAGCCUGCAUUCCCUCACCUGGAAAUGAUGAGCAGUUACUGAUGCCACA
|
..(((((.....(((((.....((..(.(.((((.((......)).))))).)..)))))))..)))))...
|
ADDX01000036.1_19553
|
GCGCCCCAUACGGAACAGGCCGUAAAGGAGCCGGGCCGCUGCGGCGGCAGCAGAUGGUGAGGCAUCUGUGGGACAAAA
|
((...........................))...(((((....))))).(((((..........))))).........
|
ADFP01000095.1_5329
|
ACGGCACAAACUGAACAGGCCGUCCCCUCGGGGAGCGGGCCGGGCCGCCGCGGCGCGGCAGCGGACGACGAUCCGCGGGACGGAA
|
..........(((.....(((.((((....))))...)))...(((((......))))).(((((......)))))....)))..
|
ADGC01006520.1_5852
|
UAACUUUGAACUGAGCAGGCAAUGCAGCGCAUGAGGCCGGGCCCGAGAGGCAGCAGAUUGAAACAACAAACAUCUGCGGGACAGUA
|
.........((((.....((.((((...))))...))...(((.....))).(((((...............)))))....)))).
|
ADGO01024387.1_128
|
AGUGAGGGGAUCGAUCUAAACUACUGGCUUGUUUCGUGCAAGUCACCGGUCCCAAGUCCGG
|
(((.....((....))...))).......................(((..........)))
|
ADGO01160766.1_269
|
CGCAGAGGGCAGCCCUUCGGGGCUGUAAUGCACUCCCCACCUGGGGAGCGGUCCCAAGUCCGC
|
.(((.....((((((....))))))...)))................(((..........)))
|
ADGO01161384.1_289
|
CGCAGAGCACGCCCUACGGGGCGUAAUGCGGCCUCACCACUGGGGUGAGCCAGUUGCAAGCCUGG
|
((((.....(((((....)))))...))))...................(((..........)))
|
ADJS01012726.1_612
|
GAGCAACUUAGGAUUUUAGGCUCCACCGCGGCUUGCUGCGGUGCAAACCCCGCAAGCCUGGCGGUCUUGCGCGCGGUCAAAAUCUAUCCGCCGGAG
|
..........(((((((......(((((((((..)))))))))...(((.((((((.........))))))...))).)))))))...........
|
ADJS01001306.1_1758
|
ACAGUACAAACUGAACAGGCCGGAUAUCUUAUCUGGGGCCGGGUCACAACGUGACAGUGGAAUGAAUUGUUUUAUCCGCGGGACAGUA
|
.........((((.....((((((((...)))))..)))...(((((...))))).(((((.............)))))....)))).
|
ADJS01006913.1_2727
|
GCAGUACAAACUGAUCAGGCUACAUUCAUUUUCAAAAAGAUGAUGUUAAGAAAAUGGUGUGCAUGCCGGGCCGGUCAAUUACCGGCAGCAGAUGAGACGAUGAUUCAUACAUCUGUGGGACAGUA
|
.........((((.....((.(((((.............................)))))....))...(((((.......))))).(((((...................)))))....)))).
|
ADJT01005907.1_1108
|
UCCGCUCGAAACUUUGCACACCUCUACGCGGUGGGCGGCAGGCAACACAGUGUGUAGAUGCUGUGGCAAAGAAUGCAAGA
|
.((((((............(((.......))))))))).......(((((..........)))))...............
|
ADJT01006171.1_2802
|
CCGGAUAUUUUGGCAGGGCUGCACCGGGCAAAGCAACCCCGCCCCAUCUUCCC
|
............(..(((.(((..........))).)))..)...........
|
ADJT01008886.1_61472
|
UGCAGAGUGAGAAAGCUCAUUACCGUUUGGUGAUGGGCUUUUGUAAUGCAGAGCGCCGGUCACAAUCCCGG
|
.(((......(((((......................)))))....)))......(((..........)))
|
ADLR01000090.1_3100
|
AUAUGAUACAGUGAGCAGGCGACGGCCGAAAUGAGAAUCGUCGCCGGGCUGCCGAAAGGCGGCAGCAGACUGUGUGACAGCACAUCUGCGGGACAGUU
|
.........(.((.....(((((((............)))))))...(((((......))))).(((((...............)))))....)).).
|
ADTP01000150.1_17338
|
AACCUUUAGUUGGUUAAUGUUACACCAACAACGAAACCAACACGCCAGGCUUAUUCCUGUGGAGUUAAAUAUGAGCGAUAAAAUUAUUCACCUGACUGAC
|
........((((.(((...(.((.(((...(.(......................).).))).)).)....))).))))....(((.((....)).))).
|
ADUU01000026.1_72568
|
UUUUUACGCCUCAAACUUUCGUUUUCGGGUCAUUUCGUCCAGACUUAAGUUCACAACACCUCACC
|
.............(((((..((((..(((.(.....))))))))..)))))..............
|
AECF01000037.1_53384
|
UGGGGUCAACUUUGGUACGGAAGCAGAUCGAAAAAUAGCUACUUUGUUAUUUGUCGUUGCUCUAAAAAGUCAACGGCAACUAAGCAUGCUUCAAGAAUUAGCUUUUUUCUGUUCAGAUCUCGAAAACAUUCAGCGGCUCAGUGAUUGUCGAACAAUAGAUGAAGCGCAAAAAAUUCUGGCUCAAGCCUAAAGUUACGUCUGAAAAAAUCAAUUCAAUUUGAAAUGUUCAAUAAUUAUUGAAAUAAUUUUAUAUUAAAAAAUAAAAUAUUUUAAUUUAAGAGAUCAAACAAAAAAGAUAAGAAGAUUCCUUGACAAAAAAUAGGCCCUAUGAUAAAUUUAAGGUAACUUGUGACAAAGUCGUGCAUGGAUGCACUAAAAAGACACCCUAUCAGUAGUAGGGUGUCUUUUUUUGC
|
...((((..((((......))))..))))...........((((((((((.....((((((.((((..((((..(((..(((........(((((((((..(((((((.((((..(((((.(((.............(((((((((((.(((((.((((((.(((............(((....)))....))).))))))......((((......))))..))))).)))))))))))....(((((((........))))))).......))).)..)))).)))).))))...)))..)))).))))).......))))))...))))...)))).))))))..)))))))))).(((((....))))).(((((((((((((((.....)))))))))))))))....
|
AECU01000025.1_4723
|
GCUGUCCGAAAAUGCUGCCUCUACGUGGCGGACGGCAGGCAACGGAGCGUGUCUCCGGCUAAAGCAUGA
|
(((((((.........(((.......))))))))))......(((((.....)))))............
|
AEDB01000020.1_61018
|
ACAGUACAAACUGAUCAGGCGAUAAACCCCAAAUUUUAAGGUUUAUGCAGCUGGGCCAUAAACGGCAGCAGAUGAAAAAUAUAACACAUCUGUGGGACAGUG
|
.........((((.....((.(((((...............)))))...))...(((.(..).))).(((((................)))))....)))).
|
AEDB01000024.1_46397
|
AAUAUAAAAAUAGAGCAGGCGAUACACCUAAUAAGGUGUGUGGGGCUGGGCCGACGAAAGUUGGCAACAGGUGAAAAAUACCUGUGGGACUAUA
|
.........((((.....((.(((((..........)))))...))...(((((......))))).(((((.........)))))....)))).
|
AEDB01000052.1_16213
|
ACAGUACAAUCUGAUCAGGCGAUGAAUGCGAAUUCAUGGUGCCGGGCUGCUUCAAAUAGCGGCAGUGGGUGAGUGAUACACACAUCUACGGGACAGUA
|
..........(((.....((((((((......)))))..)))...(((((........))))).(((((...............)))))....)))..
|
AEJN01000022.1_11402
|
CAAGUACUAAAUUUUUUACUUGAAUUAUUGACAUAAAAUAACUGCUUAUAAACCAAGAAGAAUUUUUUGCGUGGUAAAAAUCGCAUUAUUAAAAAUUUGUGUAAAGGGACAAAUUUU
|
...(((..((((((((..((((..((((...((.........))...))))..))))))))))))..)))(((((....))))).......(((((((((........)))))))))
|
AENG01000001.1_255918
|
CAUAAAUAUCUUGUAUAUUUAUAAUAUUGGCAGUGUAGUUCUUGCUGGCUCUGGGUGACGAGAGAUCUCGAAAUCAAGAGAUUGAACCAAAAAAACAACUCUUUUUAUAAGAGUUGUUUUUUUA
|
.((((((((.....))))))))...............((((..........((((...........)))).............)))).(((((..((((((((.....)))))))))))))...
|
AENI01006267.1_25045
|
UUUAUUUUUAGCCUUGUGAUGAUGAUAGUAUAUCUUCGAGUGGUGCCGCUUGUUUGUUUUUUGCCGAGACCCAUCAUCUCCA
|
.................((((((((.(.....).)..(((((....)))))(.((.(........).)).))))))))....
|
AERA01001428.1_285
|
ACUCGUUAGGGCGAGUAUAAAUAGCCAUUAGGCCCUAAGCGUCAAUGAUAAGCUCAUUGGGUUGGA
|
((((........))))........(((..............(((((((.....)))))))..))).
|
AEUX02000007.1_442608
|
AAGUCUGUUUCAGAAAACAGAAACCCAGGUCAAGUAAGUGUUCUCACUUACAAUAACACAGUUAAUGAUGGGGCAACUCAAAGUUAA
|
...(((((((....)))))))............((((((......))))))..........(((((..((((....))))..)))))
|
AEVN01000015.1_26987
|
ACAGUACAAACUGAUCAGGCGGUAAACCUUCUUCCGGGUUUUUGCAGCCGGGCCCUCUGGGCAGCAGACCUUGACGCAACGUCUGCGGGACAGUU
|
.........((((.....((.(.(((............))).)...))...((((...)))).(((((.............)))))....)))).
|
AEXQ01000083.1_43353
|
ACAGUACAAACUGAACAGGCAGCGACUAAGUCGUGUGGCCGGGUUGCUUAGCAACAGCAGAUUUAAUUAUUCAUAUUGAUGAUAAUUAACAUCUGUGGGACAGUA
|
.........((((.....((.(((((...)))))...))...(((((...))))).(((((..............................)))))....)))).
|
AE004437.1_34775
|
ACGUAUCUCCGAGUCCCGUCACGGAUGGCGGUGAUAGGAGUAACGGCUGGUUGGCACAGCCAUCGACGUUCCUGUUUGACAAUGAAACUGGUGCGUUCGCACCUCAAGAACAGGCUACGUCGUAAACCAUAAUAUCCCAACGCGGUCGGGAAUCCUCGCCCUUCAGGGCGGGGA
|
..((..((((..(((((((((....)))))).))).))))..))(((((.......)))))..((((((.(((((((............(((((....)))))....)))))))..))))))............((((.((...)).)))).(((((((((....)))))))))
|
AE016831.1_55455
|
GGCAACUUGCCUCCGAUUGGGGGUGCUGUUUAUGUACGAACUUAUGUCUUUGGUUAUUGCCCCACUUUUUGUGGGUCUAGUAAUCUUACUAGUUGACCAUUGGUUAGAUGAUUAGCAGAUAACCAUGCAAGUUGUCCUAGCCCACACGUCUAUCCGCAAGACGAAAAA
|
((((((((..((((....))))((((.......)))).............(((((((((((((((.....))))).((((((....))))))((((((...)))))).......))).)))))))...))))))))..........(((((.......))))).....
|
AE016833.1_63483
|
GCGAAACGACAUUAAAUCGUACAGAUAACACAAAAAGCAAUCCUACGGCGAAUAGGAUUGCUUU
|
.....((((.......)))).............((((((((((((.......))))))))))))
|
AE004091.2_182693
|
CGUCGCCGUAGCAACGCCGGGCAUACCCUGCCCGGCGUCGGGGCGGAUGGCCCACCCGCCGUCCGCUCUCCUUCCCCCCGCACAGACUCUGCUACGGCGGCGCCCCCUUCCCCUUACGCCGCGC
|
..(((.((......)).).))..........(.......((((((((((((......))))))))).))).......((((..(........)...)))).................)......
|
AE004439.1_147426
|
ACAUCUGUUAGAGAUAAAGGUGGGAAUGAUAGAGUAGAUCGUUUUCAGUCUGAGUCAUACUCCAAACAGGUAGAGUAGAAAGUAAAUUCGUUAGGGUAUUUAUGGGCUGAAGGUUUAAACUUCAGCCUUUUUU
|
..((((((......................................(((.((...)).)))....))))))..............((((....))))....(.(((((((((.......)))))))))...).
|
AE004439.1_841385
|
UAAUUGGCUCGAGCAGUUGCUAUUUUUUUAUUGUCGAACAAUAAUAGUAUUUGAACCCUCGAGAGUAAAUCCUUUUCUC
|
........(((((.(..(((((((..((...........)).)))))))..).....)))))(((......))).....
|
End of preview. Expand
in Data Studio
bpRNA-new
bpRNA-new is a database of single molecule secondary structures annotated using bpRNA.
bpRNA-new is a dataset of RNA families from Rfam 14.2, designed for cross-family validation to assess generalization capability. It focuses on families distinct from those in bpRNA-1m, providing a robust benchmark for evaluating model performance on unseen RNA families.
Disclaimer
This is an UNOFFICIAL release of the bpRNA-new by Kengo Sato, et al.
The team releasing bpRNA-new did not write this dataset card for this dataset so this dataset card has been written by the MultiMolecule team.
Related Datasets
- bpRNA-1m: A database of single molecule secondary structures annotated using bpRNA.
- bpRNA-spot: A subset of bpRNA-1m that applies CD-HIT (CD-HIT-EST) to remove sequences with more than 80% sequence similarity from bpRNA-1m.
- ArchiveII: A database of RNA secondary with the same families as RNAStrAlign, usually used for testing.
License
This dataset is licensed under the AGPL-3.0 License.
SPDX-License-Identifier: AGPL-3.0-or-later
Citation
@article{sato2021rna,
author = {Sato, Kengo and Akiyama, Manato and Sakakibara, Yasubumi},
journal = {Nature Communications},
month = feb,
number = 1,
pages = {941},
publisher = {Springer Science and Business Media LLC},
title = {{RNA} secondary structure prediction using deep learning with thermodynamic integration},
volume = 12,
year = 2021
}
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