question_id
stringlengths 1
5
| nl
stringlengths 4
218
| cmd
stringlengths 1
231
| oracle_man
sequence | cmd_name
stringlengths 1
24
| tldr_cmd_name
stringlengths 1
24
| manual_exist
bool 1
class | matching_info
sequence |
|---|---|---|---|---|---|---|---|
4308 | start a specific ci job | gitlab job_play {{project_name}} {{job_id}} | [
"gitlab_3"
] | gitlab | gitlab | true | {
"token": [
"job_play",
"|main|"
],
"oracle_man": [
[],
[
"gitlab_3",
"gitlab_4",
"gitlab_5",
"gitlab_6"
]
]
} |
4309 | display default information about a font | fc-pattern --default '{{DejaVu Serif}}' | [
"fc-pattern_2",
"fc-pattern_3",
"fc-pattern_7"
] | fc-pattern | fc-pattern | true | {
"token": [
"--default",
"|main|"
],
"oracle_man": [
[
"fc-pattern_2",
"fc-pattern_3",
"fc-pattern_7"
],
[
"fc-pattern_3",
"fc-pattern_4"
]
]
} |
4310 | display config information about a font | fc-pattern --config '{{DejaVu Serif}}' | [
"fc-pattern_2",
"fc-pattern_3",
"fc-pattern_6"
] | fc-pattern | fc-pattern | true | {
"token": [
"--config",
"|main|"
],
"oracle_man": [
[
"fc-pattern_2",
"fc-pattern_3",
"fc-pattern_6"
],
[
"fc-pattern_3",
"fc-pattern_4"
]
]
} |
4317 | list local docker images | docker image ls | [
"docker-image_2",
"docker-image_3"
] | docker-image | docker-image | true | {
"token": [
"docker",
"image",
"ls",
"|main|"
],
"oracle_man": [
[
"docker-image_2"
],
[
"docker-image_2"
],
[],
[
"docker-image_3"
]
]
} |
4318 | delete unused local docker images | docker image prune | [
"docker-image_2",
"docker-image_3"
] | docker-image | docker-image | true | {
"token": [
"docker",
"image",
"prune",
"|main|"
],
"oracle_man": [
[
"docker-image_2"
],
[
"docker-image_2"
],
[],
[
"docker-image_3"
]
]
} |
4319 | delete all unused images (not just those without a tag) | docker image prune --all | [
"docker-image_2",
"docker-image_3"
] | docker-image | docker-image | true | {
"token": [
"docker",
"image",
"prune",
"--all",
"|main|"
],
"oracle_man": [
[
"docker-image_2"
],
[
"docker-image_2"
],
[],
[],
[
"docker-image_3"
]
]
} |
4320 | show the history of a local docker image | docker image history {{image}} | [
"docker-image_2",
"docker-image_3"
] | docker-image | docker-image | true | {
"token": [
"docker",
"image",
"history",
"|main|"
],
"oracle_man": [
[
"docker-image_2"
],
[
"docker-image_2"
],
[],
[
"docker-image_3"
]
]
} |
4321 | open vs code | code | [
"code_1"
] | code | code | true | {
"token": [
"|main|"
],
"oracle_man": [
[
"code_1"
]
]
} |
4322 | open the current directory in vs code | code . | [
"code_1"
] | code | code | true | {
"token": [
".",
"|main|"
],
"oracle_man": [
[],
[
"code_1"
]
]
} |
4323 | open a file or directory in vs code | code {{path/to/file_or_directory}} | [
"code_1"
] | code | code | true | {
"token": [
"|main|"
],
"oracle_man": [
[
"code_1"
]
]
} |
4324 | open a file or directory in the currently open vs code window | code --reuse-window {{path/to/file_or_directory}} | [
"code_1"
] | code | code | true | {
"token": [
"--reuse-window",
"|main|"
],
"oracle_man": [
[],
[
"code_1"
]
]
} |
4325 | compare two files in vs code | code -d {{file1}} {{file2}} | [
"code_1"
] | code | code | true | {
"token": [
"-d",
"|main|"
],
"oracle_man": [
[],
[
"code_1"
]
]
} |
4326 | open vs code with superuser (sudo) permissions | sudo code {{path/to/file_or_directory}} --user-data-dir | [
"code_1"
] | code | code | true | {
"token": [
"--user-data-dir",
"|main|"
],
"oracle_man": [
[],
[
"code_1"
]
]
} |
4330 | list supported file formats | mat2 --list | [
"mat2_3",
"mat2_8"
] | mat2 | mat2 | true | {
"token": [
"--list",
"|main|"
],
"oracle_man": [
[
"mat2_8"
],
[
"mat2_3",
"mat2_4"
]
]
} |
4331 | remove metadata from a file | mat2 {{path/to/file}} | [
"mat2_3"
] | mat2 | mat2 | true | {
"token": [
"|main|"
],
"oracle_man": [
[
"mat2_3",
"mat2_4"
]
]
} |
4332 | remove metadata from a file and print detailed output to the console | mat2 --verbose {{path/to/file}} | [
"mat2_3",
"mat2_10"
] | mat2 | mat2 | true | {
"token": [
"--verbose",
"|main|"
],
"oracle_man": [
[
"mat2_10"
],
[
"mat2_3",
"mat2_4"
]
]
} |
4333 | show metadata in a file without removing it | mat2 --show {{path/to/file}} | [
"mat2_3",
"mat2_12",
"mat2_18"
] | mat2 | mat2 | true | {
"token": [
"--show",
"|main|"
],
"oracle_man": [
[
"mat2_12",
"mat2_18"
],
[
"mat2_3",
"mat2_4"
]
]
} |
4334 | partially remove metadata from a file | mat2 --lightweight {{path/to/file}} | [
"mat2_3",
"mat2_13"
] | mat2 | mat2 | true | {
"token": [
"--lightweight",
"|main|"
],
"oracle_man": [
[
"mat2_13"
],
[
"mat2_3",
"mat2_4"
]
]
} |
4335 | generate scaffolding for a new project based on a template | lein new {{template_name}} {{project_name}} | [
"lein_3",
"lein_7"
] | lein | lein | true | {
"token": [
"new",
"|main|"
],
"oracle_man": [
[
"lein_7"
],
[
"lein_3",
"lein_4"
]
]
} |
4336 | start a repl session either with the project or standalone | lein repl | [
"lein_3",
"lein_9"
] | lein | lein | true | {
"token": [
"repl",
"|main|"
],
"oracle_man": [
[
"lein_9"
],
[
"lein_3",
"lein_4"
]
]
} |
4337 | run the project's `main` function with optional args | lein run {{args}} | [
"lein_3",
"lein_26"
] | lein | lein | true | {
"token": [
"run",
"|main|"
],
"oracle_man": [
[
"lein_26"
],
[
"lein_3",
"lein_4"
]
]
} |
4338 | run the project's tests | lein test | [
"lein_3",
"lein_8"
] | lein | lein | true | {
"token": [
"test",
"|main|"
],
"oracle_man": [
[
"lein_8"
],
[
"lein_3",
"lein_4"
]
]
} |
4339 | package up the project files and all its dependencies into a jar file | lein uberjar | [
"lein_3",
"lein_10"
] | lein | lein | true | {
"token": [
"uberjar",
"|main|"
],
"oracle_man": [
[
"lein_10"
],
[
"lein_3",
"lein_4"
]
]
} |
4344 | add files to a changelist, creating the changelist if it does not exist | svn changelist {{changelist_name}} {{path/to/file1}} {{path/to/file2}} | [
"svn_1"
] | svn | svn-changelist | true | {
"token": [
"changelist",
"|main|"
],
"oracle_man": [
[],
[
"svn_1"
]
]
} |
4345 | remove files from a changelist | svn changelist --remove {{path/to/file1}} {{path/to/file2}} | [
"svn_1"
] | svn | svn-changelist | true | {
"token": [
"changelist",
"--remove",
"|main|"
],
"oracle_man": [
[],
[],
[
"svn_1"
]
]
} |
4346 | remove the whole changelist at once | svn changelist --remove --recursive --changelist {{changelist_name}} . | [
"svn_1"
] | svn | svn-changelist | true | {
"token": [
"changelist",
"--remove",
"--recursive",
"--changelist",
".",
"|main|"
],
"oracle_man": [
[],
[],
[],
[],
[],
[
"svn_1"
]
]
} |
4347 | add the contents of a spaceseparated list of directories to a changelist | svn changelist --recursive {{changelist_name}} {{path/to/directory1}} {{path/to/directory2}} | [
"svn_1"
] | svn | svn-changelist | true | {
"token": [
"changelist",
"--recursive",
"|main|"
],
"oracle_man": [
[],
[],
[
"svn_1"
]
]
} |
4348 | commit a changelist | svn commit --changelist {{changelist_name}} | [
"svn_1"
] | svn | svn-changelist | true | {
"token": [
"commit",
"--changelist",
"|main|"
],
"oracle_man": [
[],
[],
[
"svn_1"
]
]
} |
4353 | calculate the parent directory of a given path | dirname {{path/to/file_or_directory}} | [
"dirname_3"
] | dirname | dirname | true | {
"token": [
"|main|"
],
"oracle_man": [
[
"dirname_3",
"dirname_4",
"dirname_5",
"dirname_6"
]
]
} |
4354 | calculate the parent directory of multiple paths | dirname {{path/to/file_a}} {{path/to/directory_b}} | [
"dirname_3"
] | dirname | dirname | true | {
"token": [
"|main|"
],
"oracle_man": [
[
"dirname_3",
"dirname_4",
"dirname_5",
"dirname_6"
]
]
} |
4355 | delimit output with a nul character instead of a newline (useful when combining with `xargs`) | dirname --zero {{path/to/directory_a}} {{path/to/file_b}} | [
"dirname_3",
"dirname_4"
] | dirname | dirname | true | {
"token": [
"--zero",
"|main|"
],
"oracle_man": [
[
"dirname_4"
],
[
"dirname_3",
"dirname_4",
"dirname_5",
"dirname_6"
]
]
} |
4384 | build the storage pool specified by name or uuid (determine using `virsh poollist`) | virsh pool-build --pool {{name|uuid}} | [
"virsh_4",
"virsh_1286",
"virsh_1287",
"virsh_1375",
"virsh_1397",
"virsh_1401",
"virsh_1405",
"virsh_1408",
"virsh_1411",
"virsh_1414",
"virsh_1421",
"virsh_1424",
"virsh_1429",
"virsh_1432",
"virsh_1447",
"virsh_1450",
"virsh_1452",
"virsh_1455",
"virsh_1459",
"virsh_1461",
"virsh_1469",
"virsh_1472",
"virsh_1478",
"virsh_1481",
"virsh_1483",
"virsh_1487"
] | virsh | virsh-pool-build | true | {
"token": [
"pool-build",
"--pool",
"|main|"
],
"oracle_man": [
[
"virsh_1286",
"virsh_1287"
],
[
"virsh_1375",
"virsh_1397",
"virsh_1401",
"virsh_1405",
"virsh_1408",
"virsh_1411",
"virsh_1414",
"virsh_1421",
"virsh_1424",
"virsh_1429",
"virsh_1432",
"virsh_1447",
"virsh_1450",
"virsh_1452",
"virsh_1455",
"virsh_1459",
"virsh_1461",
"virsh_1469",
"virsh_1472",
"virsh_1478",
"virsh_1481",
"virsh_1483",
"virsh_1487"
],
[
"virsh_4",
"virsh_5",
"virsh_6",
"virsh_7",
"virsh_8",
"virsh_9",
"virsh_10",
"virsh_11",
"virsh_12",
"virsh_13",
"virsh_14",
"virsh_15",
"virsh_16",
"virsh_17",
"virsh_18",
"virsh_19",
"virsh_20",
"virsh_21",
"virsh_22",
"virsh_23",
"virsh_24",
"virsh_25",
"virsh_26",
"virsh_27",
"virsh_28",
"virsh_29",
"virsh_30",
"virsh_31",
"virsh_32",
"virsh_33"
]
]
} |
4392 | compile a source file | nim compile {{file.nim}} | [
"nim_2",
"nim_4",
"nim_5"
] | nim | nim | true | {
"token": [
"compile",
"|main|"
],
"oracle_man": [
[
"nim_4",
"nim_5"
],
[
"nim_2",
"nim_3",
"nim_4",
"nim_5",
"nim_6",
"nim_7"
]
]
} |
4393 | compile and run a source file | nim compile -r {{file.nim}} | [
"nim_2",
"nim_4",
"nim_5",
"nim_7",
"nim_20"
] | nim | nim | true | {
"token": [
"compile",
"-r",
"|main|"
],
"oracle_man": [
[
"nim_4",
"nim_5"
],
[
"nim_7",
"nim_20"
],
[
"nim_2",
"nim_3",
"nim_4",
"nim_5",
"nim_6",
"nim_7"
]
]
} |
4394 | compile a source file with release optimizations enabled | nim compile -d:release {{file.nim}} | [
"nim_2",
"nim_4",
"nim_5",
"nim_17"
] | nim | nim | true | {
"token": [
"compile",
"-d:release",
"|main|"
],
"oracle_man": [
[
"nim_4",
"nim_5"
],
[
"nim_17"
],
[
"nim_2",
"nim_3",
"nim_4",
"nim_5",
"nim_6",
"nim_7"
]
]
} |
4395 | build a release binary optimized for low file size | nim compile -d:release --opt:size {{file.nim}} | [
"nim_2",
"nim_4",
"nim_5",
"nim_17"
] | nim | nim | true | {
"token": [
"compile",
"-d:release",
"--opt:size",
"|main|"
],
"oracle_man": [
[
"nim_4",
"nim_5"
],
[
"nim_17"
],
[],
[
"nim_2",
"nim_3",
"nim_4",
"nim_5",
"nim_6",
"nim_7"
]
]
} |
4396 | generate html documentation for a module (output will be placed in the current directory) | nim doc {{file.nim}} | [
"nim_2",
"nim_6"
] | nim | nim | true | {
"token": [
"doc",
"|main|"
],
"oracle_man": [
[
"nim_6"
],
[
"nim_2",
"nim_3",
"nim_4",
"nim_5",
"nim_6",
"nim_7"
]
]
} |
4403 | interactively create a `composer.json` file | composer init | [
"composer_1",
"composer_26"
] | composer | composer | true | {
"token": [
"init",
"|main|"
],
"oracle_man": [
[
"composer_26"
],
[
"composer_1"
]
]
} |
4404 | add a package as a dependency for this project, adding it to `composer.json` | composer require {{user/package_name}} | [
"composer_1",
"composer_33"
] | composer | composer | true | {
"token": [
"require",
"|main|"
],
"oracle_man": [
[
"composer_33"
],
[
"composer_1"
]
]
} |
4405 | install all the dependencies in this project's `composer.json` and create `composer.lock` | composer install | [
"composer_1",
"composer_27"
] | composer | composer | true | {
"token": [
"install",
"|main|"
],
"oracle_man": [
[
"composer_27"
],
[
"composer_1"
]
]
} |
4406 | uninstall a package from this project, removing it as a dependency from `composer.json` | composer remove {{user/package_name}} | [
"composer_1",
"composer_32"
] | composer | composer | true | {
"token": [
"remove",
"|main|"
],
"oracle_man": [
[
"composer_32"
],
[
"composer_1"
]
]
} |
4407 | update all the dependencies in this project's `composer.json` and note versions in `composer.lock` file | composer update | [
"composer_1",
"composer_39"
] | composer | composer | true | {
"token": [
"update",
"|main|"
],
"oracle_man": [
[
"composer_39"
],
[
"composer_1"
]
]
} |
4408 | update composer lock only after updating `composer.json` manually | composer update --lock | [
"composer_1",
"composer_39"
] | composer | composer | true | {
"token": [
"update",
"--lock",
"|main|"
],
"oracle_man": [
[
"composer_39"
],
[],
[
"composer_1"
]
]
} |
4409 | learn more about why a dependency can't be installed | composer why-not {{user/package_name}} | [
"composer_1",
"composer_31"
] | composer | composer | true | {
"token": [
"why-not",
"|main|"
],
"oracle_man": [
[
"composer_31"
],
[
"composer_1"
]
]
} |
4410 | update composer to its latest version | composer self-update | [
"composer_1"
] | composer | composer | true | {
"token": [
"self-update",
"|main|"
],
"oracle_man": [
[],
[
"composer_1"
]
]
} |
4411 | run in terminal | glances | [
"glances_3"
] | glances | glances | true | {
"token": [
"|main|"
],
"oracle_man": [
[
"glances_3",
"glances_4"
]
]
} |
4412 | run in web server mode to show results in browser | glances -w | [
"glances_3",
"glances_17",
"glances_45",
"glances_47",
"glances_57",
"glances_135",
"glances_159"
] | glances | glances | true | {
"token": [
"-w",
"|main|"
],
"oracle_man": [
[
"glances_17",
"glances_45",
"glances_47",
"glances_57",
"glances_135",
"glances_159"
],
[
"glances_3",
"glances_4"
]
]
} |
4413 | run in server mode to allow connections from other glances clients | glances -s | [
"glances_3",
"glances_12",
"glances_21",
"glances_31",
"glances_38",
"glances_39",
"glances_40",
"glances_41",
"glances_42",
"glances_43",
"glances_50",
"glances_53",
"glances_56",
"glances_135",
"glances_164"
] | glances | glances | true | {
"token": [
"-s",
"|main|"
],
"oracle_man": [
[
"glances_12",
"glances_21",
"glances_31",
"glances_38",
"glances_39",
"glances_40",
"glances_41",
"glances_42",
"glances_43",
"glances_50",
"glances_53",
"glances_56",
"glances_135",
"glances_164"
],
[
"glances_3",
"glances_4"
]
]
} |
4414 | connect to a glances server | glances -c {{hostname}} | [
"glances_3",
"glances_8",
"glances_14",
"glances_30",
"glances_38",
"glances_46",
"glances_58",
"glances_161",
"glances_165",
"glances_166"
] | glances | glances | true | {
"token": [
"-c",
"|main|"
],
"oracle_man": [
[
"glances_8",
"glances_14",
"glances_30",
"glances_38",
"glances_46",
"glances_58",
"glances_161",
"glances_165",
"glances_166"
],
[
"glances_3",
"glances_4"
]
]
} |
4415 | require a password in (web) server mode | glances -s --password | [
"glances_3",
"glances_12",
"glances_21",
"glances_31",
"glances_37",
"glances_38",
"glances_39",
"glances_40",
"glances_41",
"glances_42",
"glances_43",
"glances_50",
"glances_53",
"glances_56",
"glances_135",
"glances_164"
] | glances | glances | true | {
"token": [
"-s",
"--password",
"|main|"
],
"oracle_man": [
[
"glances_12",
"glances_21",
"glances_31",
"glances_38",
"glances_39",
"glances_40",
"glances_41",
"glances_42",
"glances_43",
"glances_50",
"glances_53",
"glances_56",
"glances_135",
"glances_164"
],
[
"glances_37"
],
[
"glances_3",
"glances_4"
]
]
} |
4419 | create a new encrypted vault file with a prompt for a password | ansible-vault create {{vault_file}} | [
"ansible-vault_3",
"ansible-vault_8"
] | ansible-vault | ansible-vault | true | {
"token": [
"create",
"|main|"
],
"oracle_man": [
[
"ansible-vault_8"
],
[
"ansible-vault_3",
"ansible-vault_4"
]
]
} |
4420 | create a new encrypted vault file using a vault key file to encrypt it | ansible-vault create --vault-password-file={{password_file}} {{vault_file}} | [
"ansible-vault_3",
"ansible-vault_8",
"ansible-vault_12",
"ansible-vault_17",
"ansible-vault_22",
"ansible-vault_26",
"ansible-vault_32",
"ansible-vault_40",
"ansible-vault_49"
] | ansible-vault | ansible-vault | true | {
"token": [
"create",
"--vault-password-file",
"|main|"
],
"oracle_man": [
[
"ansible-vault_8"
],
[
"ansible-vault_12",
"ansible-vault_17",
"ansible-vault_22",
"ansible-vault_26",
"ansible-vault_32",
"ansible-vault_40",
"ansible-vault_49"
],
[
"ansible-vault_3",
"ansible-vault_4"
]
]
} |
4421 | encrypt an existing file using an optional password file | ansible-vault encrypt --vault-password-file={{password_file}} {{vault_file}} | [
"ansible-vault_3",
"ansible-vault_12",
"ansible-vault_17",
"ansible-vault_22",
"ansible-vault_26",
"ansible-vault_27",
"ansible-vault_32",
"ansible-vault_33",
"ansible-vault_40",
"ansible-vault_49"
] | ansible-vault | ansible-vault | true | {
"token": [
"encrypt",
"--vault-password-file",
"|main|"
],
"oracle_man": [
[
"ansible-vault_3",
"ansible-vault_27",
"ansible-vault_33"
],
[
"ansible-vault_12",
"ansible-vault_17",
"ansible-vault_22",
"ansible-vault_26",
"ansible-vault_32",
"ansible-vault_40",
"ansible-vault_49"
],
[
"ansible-vault_3",
"ansible-vault_4"
]
]
} |
4422 | encrypt a string using ansible's encrypted string format, displaying interactive prompts | ansible-vault encrypt_string | [
"ansible-vault_3"
] | ansible-vault | ansible-vault | true | {
"token": [
"encrypt_string",
"|main|"
],
"oracle_man": [
[],
[
"ansible-vault_3",
"ansible-vault_4"
]
]
} |
4423 | view an encrypted file, using a password file to decrypt | ansible-vault view --vault-password-file={{password_file}} {{vault_file}} | [
"ansible-vault_3",
"ansible-vault_12",
"ansible-vault_17",
"ansible-vault_22",
"ansible-vault_23",
"ansible-vault_26",
"ansible-vault_32",
"ansible-vault_40",
"ansible-vault_49"
] | ansible-vault | ansible-vault | true | {
"token": [
"view",
"--vault-password-file",
"|main|"
],
"oracle_man": [
[
"ansible-vault_23"
],
[
"ansible-vault_12",
"ansible-vault_17",
"ansible-vault_22",
"ansible-vault_26",
"ansible-vault_32",
"ansible-vault_40",
"ansible-vault_49"
],
[
"ansible-vault_3",
"ansible-vault_4"
]
]
} |
4424 | rekey already encrypted vault file with a new password file | ansible-vault rekey --vault-password-file={{old_password_file}} --new-vault-password-file={{new_password_file}} {{vault_file}} | [
"ansible-vault_3",
"ansible-vault_12",
"ansible-vault_17",
"ansible-vault_22",
"ansible-vault_26",
"ansible-vault_32",
"ansible-vault_40",
"ansible-vault_43",
"ansible-vault_47",
"ansible-vault_49"
] | ansible-vault | ansible-vault | true | {
"token": [
"rekey",
"--vault-password-file",
"--new-vault-password-file",
"|main|"
],
"oracle_man": [
[
"ansible-vault_43"
],
[
"ansible-vault_12",
"ansible-vault_17",
"ansible-vault_22",
"ansible-vault_26",
"ansible-vault_32",
"ansible-vault_40",
"ansible-vault_49"
],
[
"ansible-vault_47"
],
[
"ansible-vault_3",
"ansible-vault_4"
]
]
} |
4425 | create a helm chart | helm create {{chart_name}} | [
"helm_3"
] | helm | helm | true | {
"token": [
"create",
"|main|"
],
"oracle_man": [
[],
[
"helm_3",
"helm_4"
]
]
} |
4426 | add a new helm repository | helm repo add {{repo_name}} | [
"helm_3"
] | helm | helm | true | {
"token": [
"repo",
"add",
"|main|"
],
"oracle_man": [
[],
[],
[
"helm_3",
"helm_4"
]
]
} |
4427 | list helm repositories | helm repo list | [
"helm_3"
] | helm | helm | true | {
"token": [
"repo",
"list",
"|main|"
],
"oracle_man": [
[],
[],
[
"helm_3",
"helm_4"
]
]
} |
4428 | update helm repositories | helm repo update | [
"helm_3"
] | helm | helm | true | {
"token": [
"repo",
"update",
"|main|"
],
"oracle_man": [
[],
[],
[
"helm_3",
"helm_4"
]
]
} |
4429 | delete a helm repository | helm repo remove {{repo_name}} | [
"helm_3"
] | helm | helm | true | {
"token": [
"repo",
"remove",
"|main|"
],
"oracle_man": [
[],
[],
[
"helm_3",
"helm_4"
]
]
} |
4430 | install a helm chart | helm install {{repo_name}}/{{chart_name}} | [
"helm_3"
] | helm | helm | true | {
"token": [
"install",
"|main|"
],
"oracle_man": [
[],
[
"helm_3",
"helm_4"
]
]
} |
4431 | download helm chart as a tar archive | helm get {{chart_release_name}} | [
"helm_3"
] | helm | helm | true | {
"token": [
"get",
"|main|"
],
"oracle_man": [
[],
[
"helm_3",
"helm_4"
]
]
} |
4432 | update helm dependencies | helm dependency update | [
"helm_3"
] | helm | helm | true | {
"token": [
"dependency",
"update",
"|main|"
],
"oracle_man": [
[],
[],
[
"helm_3",
"helm_4"
]
]
} |
4433 | clear the screen (equivalent to pressing controll in bash shell) | clear | [
"clear_3"
] | clear | clear | true | {
"token": [
"|main|"
],
"oracle_man": [
[
"clear_3",
"clear_4"
]
]
} |
4434 | clear the screen but keep the terminal's scrollback buffer | clear -x | [
"clear_2",
"clear_3",
"clear_7"
] | clear | clear | true | {
"token": [
"-x",
"|main|"
],
"oracle_man": [
[
"clear_2",
"clear_7"
],
[
"clear_3",
"clear_4"
]
]
} |
4435 | indicate the type of terminal to clean (defaults to the value of the environment variable `term`) | clear -T {{type_of_terminal}} | [
"clear_2",
"clear_3",
"clear_5"
] | clear | clear | true | {
"token": [
"-T",
"|main|"
],
"oracle_man": [
[
"clear_2",
"clear_5"
],
[
"clear_3",
"clear_4"
]
]
} |
4436 | show the version of `ncurses` used by `clear` | clear -V | [
"clear_2",
"clear_3",
"clear_6"
] | clear | clear | true | {
"token": [
"-V",
"|main|"
],
"oracle_man": [
[
"clear_2",
"clear_6"
],
[
"clear_3",
"clear_4"
]
]
} |
4443 | inspect the headers of a file | xsv headers {{path/to/file.csv}} | [
"xsv_3"
] | xsv | xsv | true | {
"token": [
"headers",
"|main|"
],
"oracle_man": [
[],
[
"xsv_3",
"xsv_4"
]
]
} |
4444 | count the number of entries | xsv count {{path/to/file.csv}} | [
"xsv_3"
] | xsv | xsv | true | {
"token": [
"count",
"|main|"
],
"oracle_man": [
[],
[
"xsv_3",
"xsv_4"
]
]
} |
4445 | get an overview of the shape of entries | xsv stats {{path/to/file.csv}} | xsv table | [
"xsv_3"
] | xsv | xsv | true | {
"token": [
"stats",
"table",
"|main|"
],
"oracle_man": [
[],
[],
[
"xsv_3",
"xsv_4"
]
]
} |
4446 | select a few columns | xsv select {{column_a,column_b}} {{path/to/file.csv}} | [
"xsv_3"
] | xsv | xsv | true | {
"token": [
"select",
"|main|"
],
"oracle_man": [
[],
[
"xsv_3",
"xsv_4"
]
]
} |
4447 | show 10 random entries | xsv sample {{10}} {{path/to/file.csv}} | [
"xsv_3"
] | xsv | xsv | true | {
"token": [
"sample",
"|main|"
],
"oracle_man": [
[],
[
"xsv_3",
"xsv_4"
]
]
} |
4448 | join a column from one file to another | xsv join --no-case {{column_a}} {{path/to/file/a.csv}} {{column_b}} {{path/to/file/b.csv}} | xsv table | [
"xsv_3"
] | xsv | xsv | true | {
"token": [
"join",
"--no-case",
"table",
"|main|"
],
"oracle_man": [
[],
[],
[],
[
"xsv_3",
"xsv_4"
]
]
} |
4451 | render a `png` image with a filename based on the input filename and output format (uppercase o) | fdp -T {{png}} -O {{path/to/input.gv}} | [
"fdp_3",
"fdp_12",
"fdp_13",
"fdp_14",
"fdp_45",
"fdp_109",
"fdp_112"
] | fdp | fdp | true | {
"token": [
"-T",
"-O",
"|main|"
],
"oracle_man": [
[
"fdp_12",
"fdp_13",
"fdp_14",
"fdp_45",
"fdp_109",
"fdp_112"
],
[
"fdp_112"
],
[
"fdp_3",
"fdp_4",
"fdp_5",
"fdp_6",
"fdp_7",
"fdp_8",
"fdp_9",
"fdp_10",
"fdp_11"
]
]
} |
4452 | render a `svg` image with the specified output filename (lowercase o) | fdp -T {{svg}} -o {{path/to/image.svg}} {{path/to/input.gv}} | [
"fdp_3",
"fdp_12",
"fdp_13",
"fdp_14",
"fdp_45",
"fdp_109",
"fdp_112",
"fdp_120"
] | fdp | fdp | true | {
"token": [
"-T",
"-o",
"|main|"
],
"oracle_man": [
[
"fdp_12",
"fdp_13",
"fdp_14",
"fdp_45",
"fdp_109",
"fdp_112"
],
[
"fdp_120"
],
[
"fdp_3",
"fdp_4",
"fdp_5",
"fdp_6",
"fdp_7",
"fdp_8",
"fdp_9",
"fdp_10",
"fdp_11"
]
]
} |
4453 | render the output in `ps`, `pdf`, `svg`, `fig`, `png`, `gif`, `jpg`, `json`, or `dot` format | fdp -T {{format}} -O {{path/to/input.gv}} | [
"fdp_3",
"fdp_12",
"fdp_13",
"fdp_14",
"fdp_45",
"fdp_109",
"fdp_112"
] | fdp | fdp | true | {
"token": [
"-T",
"-O",
"|main|"
],
"oracle_man": [
[
"fdp_12",
"fdp_13",
"fdp_14",
"fdp_45",
"fdp_109",
"fdp_112"
],
[
"fdp_112"
],
[
"fdp_3",
"fdp_4",
"fdp_5",
"fdp_6",
"fdp_7",
"fdp_8",
"fdp_9",
"fdp_10",
"fdp_11"
]
]
} |
4454 | render a `gif` image using stdin and stdout | echo "{{digraph {this -> that} }}" | fdp -T {{gif}} > {{path/to/image.gif}} | [
"fdp_3",
"fdp_12",
"fdp_13",
"fdp_14",
"fdp_45",
"fdp_109",
"fdp_112"
] | fdp | fdp | true | {
"token": [
"echo",
"-T",
"|main|"
],
"oracle_man": [
[],
[
"fdp_12",
"fdp_13",
"fdp_14",
"fdp_45",
"fdp_109",
"fdp_112"
],
[
"fdp_3",
"fdp_4",
"fdp_5",
"fdp_6",
"fdp_7",
"fdp_8",
"fdp_9",
"fdp_10",
"fdp_11"
]
]
} |
4455 | display help | fdp -? | [
"fdp_3",
"fdp_129"
] | fdp | fdp | true | {
"token": [
"-?",
"|main|"
],
"oracle_man": [
[
"fdp_129"
],
[
"fdp_3",
"fdp_4",
"fdp_5",
"fdp_6",
"fdp_7",
"fdp_8",
"fdp_9",
"fdp_10",
"fdp_11"
]
]
} |
4456 | produce three tabseparated columns lines only in first file, lines only in second file and common lines | comm {{file1}} {{file2}} | [
"comm_4"
] | comm | comm | true | {
"token": [
"|main|"
],
"oracle_man": [
[
"comm_4",
"comm_5",
"comm_6"
]
]
} |
4457 | print only lines common to both files | comm -12 {{file1}} {{file2}} | [
"comm_3",
"comm_4",
"comm_55",
"comm_60",
"comm_62"
] | comm | comm | true | {
"token": [
"-12",
"|main|"
],
"oracle_man": [
[
"comm_3",
"comm_55",
"comm_60",
"comm_62"
],
[
"comm_4",
"comm_5",
"comm_6"
]
]
} |
4458 | print only lines common to both files, reading one file from stdin | cat {{file1}} | comm -12 - {{file2}} | [
"comm_3",
"comm_4",
"comm_6",
"comm_9",
"comm_10",
"comm_11",
"comm_13",
"comm_14",
"comm_20",
"comm_22",
"comm_26",
"comm_27",
"comm_29",
"comm_32",
"comm_33",
"comm_34",
"comm_37",
"comm_38",
"comm_39",
"comm_40",
"comm_50",
"comm_55",
"comm_56",
"comm_58",
"comm_60",
"comm_62"
] | comm | comm | true | {
"token": [
"cat",
"-12",
"-",
"|main|"
],
"oracle_man": [
[],
[
"comm_3",
"comm_55",
"comm_60",
"comm_62"
],
[
"comm_3",
"comm_6",
"comm_9",
"comm_10",
"comm_11",
"comm_13",
"comm_14",
"comm_20",
"comm_22",
"comm_26",
"comm_27",
"comm_29",
"comm_32",
"comm_33",
"comm_34",
"comm_37",
"comm_38",
"comm_39",
"comm_40",
"comm_50",
"comm_55",
"comm_56",
"comm_58",
"comm_60",
"comm_62"
],
[
"comm_4",
"comm_5",
"comm_6"
]
]
} |
4459 | get lines only found in first file, saving the result to a third file | comm -23 {{file1}} {{file2}} > {{file1_only}} | [
"comm_4",
"comm_58",
"comm_62"
] | comm | comm | true | {
"token": [
"-23",
"|main|"
],
"oracle_man": [
[
"comm_58",
"comm_62"
],
[
"comm_4",
"comm_5",
"comm_6"
]
]
} |
4460 | print lines only found in second file, when the files aren't sorted | comm -13 <(sort {{file1}}) <(sort {{file2}}) | [
"comm_4",
"comm_11",
"comm_26",
"comm_34"
] | comm | comm | true | {
"token": [
"-13",
"(sort",
"|main|"
],
"oracle_man": [
[
"comm_11",
"comm_26",
"comm_34"
],
[],
[
"comm_4",
"comm_5",
"comm_6"
]
]
} |
4461 | convert a sam input file to bam stream and save to file | samtools view -S -b {{input.sam}} > {{output.bam}} | [
"samtools_2",
"samtools_34",
"samtools_35",
"samtools_41",
"samtools_51",
"samtools_56",
"samtools_74",
"samtools_76",
"samtools_87",
"samtools_93",
"samtools_115",
"samtools_126",
"samtools_128",
"samtools_130",
"samtools_160",
"samtools_163",
"samtools_165",
"samtools_182",
"samtools_201",
"samtools_203",
"samtools_206"
] | samtools | samtools | true | {
"token": [
"view",
"-S",
"-b",
"|main|"
],
"oracle_man": [
[
"samtools_2",
"samtools_41",
"samtools_160",
"samtools_163",
"samtools_165",
"samtools_201",
"samtools_206"
],
[
"samtools_56",
"samtools_115",
"samtools_128"
],
[
"samtools_2",
"samtools_34",
"samtools_51",
"samtools_74",
"samtools_76",
"samtools_87",
"samtools_93",
"samtools_126",
"samtools_130",
"samtools_182",
"samtools_201",
"samtools_203"
],
[
"samtools_35",
"samtools_36",
"samtools_37",
"samtools_38"
]
]
} |
4462 | take input from stdin () and print the sam header and any reads overlapping a specific region to stdout | {{other_command}} | samtools view -h - chromosome:start-end | [
"samtools_1",
"samtools_2",
"samtools_6",
"samtools_7",
"samtools_15",
"samtools_25",
"samtools_29",
"samtools_34",
"samtools_35",
"samtools_36",
"samtools_39",
"samtools_40",
"samtools_41",
"samtools_43",
"samtools_45",
"samtools_48",
"samtools_50",
"samtools_51",
"samtools_52",
"samtools_55",
"samtools_56",
"samtools_57",
"samtools_65",
"samtools_72",
"samtools_74",
"samtools_76",
"samtools_80",
"samtools_82",
"samtools_84",
"samtools_87",
"samtools_89",
"samtools_90",
"samtools_92",
"samtools_93",
"samtools_96",
"samtools_99",
"samtools_103",
"samtools_110",
"samtools_113",
"samtools_114",
"samtools_115",
"samtools_116",
"samtools_117",
"samtools_119",
"samtools_121",
"samtools_123",
"samtools_124",
"samtools_125",
"samtools_126",
"samtools_128",
"samtools_129",
"samtools_130",
"samtools_132",
"samtools_133",
"samtools_134",
"samtools_135",
"samtools_136",
"samtools_138",
"samtools_144",
"samtools_145",
"samtools_147",
"samtools_149",
"samtools_160",
"samtools_161",
"samtools_163",
"samtools_165",
"samtools_166",
"samtools_169",
"samtools_171",
"samtools_175",
"samtools_178",
"samtools_181",
"samtools_182",
"samtools_186",
"samtools_188",
"samtools_192",
"samtools_193",
"samtools_194",
"samtools_195",
"samtools_199",
"samtools_201",
"samtools_203",
"samtools_206"
] | samtools | samtools | true | {
"token": [
"view",
"-h",
"-",
"chromosome:start-end",
"|main|"
],
"oracle_man": [
[
"samtools_2",
"samtools_41",
"samtools_160",
"samtools_163",
"samtools_165",
"samtools_201",
"samtools_206"
],
[
"samtools_87",
"samtools_89",
"samtools_93",
"samtools_130",
"samtools_133",
"samtools_163"
],
[
"samtools_1",
"samtools_2",
"samtools_6",
"samtools_7",
"samtools_15",
"samtools_25",
"samtools_29",
"samtools_34",
"samtools_36",
"samtools_39",
"samtools_40",
"samtools_43",
"samtools_45",
"samtools_48",
"samtools_50",
"samtools_51",
"samtools_52",
"samtools_55",
"samtools_56",
"samtools_57",
"samtools_65",
"samtools_72",
"samtools_74",
"samtools_76",
"samtools_80",
"samtools_82",
"samtools_84",
"samtools_87",
"samtools_89",
"samtools_90",
"samtools_92",
"samtools_93",
"samtools_96",
"samtools_99",
"samtools_103",
"samtools_110",
"samtools_113",
"samtools_114",
"samtools_115",
"samtools_116",
"samtools_117",
"samtools_119",
"samtools_121",
"samtools_123",
"samtools_124",
"samtools_125",
"samtools_126",
"samtools_128",
"samtools_129",
"samtools_130",
"samtools_132",
"samtools_133",
"samtools_134",
"samtools_135",
"samtools_136",
"samtools_138",
"samtools_144",
"samtools_145",
"samtools_147",
"samtools_149",
"samtools_160",
"samtools_161",
"samtools_163",
"samtools_165",
"samtools_166",
"samtools_169",
"samtools_171",
"samtools_175",
"samtools_178",
"samtools_181",
"samtools_182",
"samtools_186",
"samtools_188",
"samtools_192",
"samtools_193",
"samtools_194",
"samtools_195",
"samtools_199",
"samtools_201",
"samtools_203",
"samtools_206"
],
[],
[
"samtools_35",
"samtools_36",
"samtools_37",
"samtools_38"
]
]
} |
4463 | sort file and save to bam (the output format is automatically determined from the output file's extension) | samtools sort {{input}} -o {{output.bam}} | [
"samtools_2",
"samtools_6",
"samtools_7",
"samtools_29",
"samtools_35",
"samtools_48",
"samtools_55",
"samtools_57",
"samtools_93",
"samtools_119",
"samtools_128",
"samtools_130",
"samtools_135",
"samtools_136",
"samtools_138",
"samtools_160",
"samtools_163",
"samtools_165"
] | samtools | samtools | true | {
"token": [
"sort",
"-o",
"|main|"
],
"oracle_man": [
[
"samtools_6",
"samtools_55"
],
[
"samtools_2",
"samtools_6",
"samtools_7",
"samtools_29",
"samtools_48",
"samtools_55",
"samtools_57",
"samtools_93",
"samtools_119",
"samtools_128",
"samtools_130",
"samtools_135",
"samtools_136",
"samtools_138",
"samtools_160",
"samtools_163",
"samtools_165"
],
[
"samtools_35",
"samtools_36",
"samtools_37",
"samtools_38"
]
]
} |
4464 | index a sorted bam file (creates {{sorted_input.bam.bai}}) | samtools index {{sorted_input.bam}} | [
"samtools_5",
"samtools_35",
"samtools_38",
"samtools_51",
"samtools_53"
] | samtools | samtools | true | {
"token": [
"index",
"|main|"
],
"oracle_man": [
[
"samtools_5",
"samtools_38",
"samtools_51",
"samtools_53"
],
[
"samtools_35",
"samtools_36",
"samtools_37",
"samtools_38"
]
]
} |
4465 | print alignment statistics about a file | samtools flagstat {{sorted_input}} | [
"samtools_9",
"samtools_35",
"samtools_66"
] | samtools | samtools | true | {
"token": [
"flagstat",
"|main|"
],
"oracle_man": [
[
"samtools_9",
"samtools_66"
],
[
"samtools_35",
"samtools_36",
"samtools_37",
"samtools_38"
]
]
} |
4466 | count alignments to each index (chromosome / contig) | samtools idxstats {{sorted_indexed_input}} | [
"samtools_8",
"samtools_35",
"samtools_62"
] | samtools | samtools | true | {
"token": [
"idxstats",
"|main|"
],
"oracle_man": [
[
"samtools_8",
"samtools_62"
],
[
"samtools_35",
"samtools_36",
"samtools_37",
"samtools_38"
]
]
} |
4467 | merge multiple files | samtools merge {{output}} {{input1 input2 …}} | [
"samtools_17",
"samtools_35",
"samtools_87"
] | samtools | samtools | true | {
"token": [
"merge",
"|main|"
],
"oracle_man": [
[
"samtools_17",
"samtools_87"
],
[
"samtools_35",
"samtools_36",
"samtools_37",
"samtools_38"
]
]
} |
4468 | split input file according to read groups | samtools split {{merged_input}} | [
"samtools_18",
"samtools_35",
"samtools_91"
] | samtools | samtools | true | {
"token": [
"split",
"|main|"
],
"oracle_man": [
[
"samtools_18",
"samtools_91"
],
[
"samtools_35",
"samtools_36",
"samtools_37",
"samtools_38"
]
]
} |
4469 | compare 2 images | compare {{image1.png}} {{image2.png}} {{diff.png}} | [
"compare_5"
] | compare | compare | true | {
"token": [
"|main|"
],
"oracle_man": [
[
"compare_5",
"compare_6",
"compare_7",
"compare_8",
"compare_9",
"compare_10",
"compare_11",
"compare_12",
"compare_13"
]
]
} |
4470 | compare 2 images using a custom metric | compare -verbose -metric {{PSNR}} {{image1.png}} {{image2.png}} {{diff.png}} | [
"compare_5"
] | compare | compare | true | {
"token": [
"-verbose",
"-metric",
"|main|"
],
"oracle_man": [
[
"compare_5"
],
[
"compare_5"
],
[
"compare_5",
"compare_6",
"compare_7",
"compare_8",
"compare_9",
"compare_10",
"compare_11",
"compare_12",
"compare_13"
]
]
} |
4471 | recursively find files matching the given pattern in the current directory | fd {{pattern}} | [
"fd_3"
] | fd | fd | true | {
"token": [
"|main|"
],
"oracle_man": [
[
"fd_3"
]
]
} |
4472 | find files that begin with "foo" | fd {{'^foo'}} | [
"fd_3"
] | fd | fd | true | {
"token": [
"|main|"
],
"oracle_man": [
[
"fd_3"
]
]
} |
4473 | find files with a specific extension | fd --extension {{txt}} | [
"fd_3",
"fd_46"
] | fd | fd | true | {
"token": [
"--extension",
"|main|"
],
"oracle_man": [
[
"fd_46"
],
[
"fd_3"
]
]
} |
4474 | find files in a specific directory | fd {{pattern}} {{path/to/directory}} | [
"fd_3"
] | fd | fd | true | {
"token": [
"|main|"
],
"oracle_man": [
[
"fd_3"
]
]
} |
4475 | include ignored and hidden files in the search | fd --hidden --no-ignore {{pattern}} | [
"fd_3",
"fd_4",
"fd_5",
"fd_13",
"fd_14"
] | fd | fd | true | {
"token": [
"--hidden",
"--no-ignore",
"|main|"
],
"oracle_man": [
[
"fd_4",
"fd_13"
],
[
"fd_5",
"fd_13",
"fd_14"
],
[
"fd_3"
]
]
} |
4476 | execute a command on each search result returned | fd {{pattern}} --exec {{command}} | [
"fd_3",
"fd_21",
"fd_79",
"fd_80",
"fd_95"
] | fd | fd | true | {
"token": [
"--exec",
"|main|"
],
"oracle_man": [
[
"fd_21",
"fd_79",
"fd_80",
"fd_95"
],
[
"fd_3"
]
]
} |
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