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gtil_influx.py
jirisrba/gtil2-wifi
1
122518
<filename>gtil_influx.py #!/usr/bin/env python3 """ read data from GTIL2 Wifi module and send it to influxdb server """ # # crontab # # */5 * * * * /usr/bin/python3 /home/pi/gtil_influx.py # import requests from requests.auth import HTTPBasicAuth from influxdb import InfluxDBClient # GTIL invertor WiFi IP gtil_ip = '192.168.2.205' # influx db config db = InfluxDBClient('192.168.2.4', 8089, use_udp=True, udp_port=8089, database='malina') measurement = 'gtil2' gtil_data = dict() def read_gtil_data(): """ read data from GTIL2 Wifi module """ response = requests.get( 'http://' + gtil_ip + '/status.html', auth=HTTPBasicAuth('admin', 'admin')) for line in response.text.splitlines(): # var webdata_sn = "1905100904"; if line.startswith('var webdata'): key, value = line[12:-1].split("=") gtil_data[key.strip()] = value.strip().replace('"', '') # print(gtil_data) return gtil_data def send_data_to_influx(): """ send data to influxdb """ json_body = { "tags": { "sn": gtil_data['sn'], }, "points": [{ "measurement": measurement, "fields": { "current_power": int(gtil_data['now_p']), "today_energy": float(gtil_data['today_e']), "total_energy": float(gtil_data['total_e']) } }] } db.send_packet(json_body) def main(): """Main()""" read_gtil_data() send_data_to_influx() if __name__ == "__main__": main()
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miping/training/noGloveValueError.py
mclgoerg/MiningPersonalityInGerman
1
161830
<gh_stars>1-10 class NoGloveValueError(Exception): """ Raised if no value can be found in GloVe for a user's text. """ pass
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cir_project/cirp_user/scripts/camera_user.py
sprkrd/UPC-MAI-CIR
1
32631
#!/usr/bin/env python import rospy from std_msgs.msg import String from peyetribe import EyeTribe import time from cir_user.srv import UserAction, UserActionResponse TH1 = 1280*(1.0/3) TH2 = 1280*(2.0/3) IP = "192.168.101.72" class CameraUserServer: def __init__(self): rospy.init_node("talker") rospy.Service("poll_action", UserAction, self._action_cb) self._next_action = None # self._tracker = EyeTribe() # self._tracker.connect(IP) # self._tracker.pullmode() def _action_cb(self, req): rate = rospy.Rate(10) action = self._next_action while action is None: rate.sleep() action = self._next_action self._next_action = None return UserActionResponse(action=action) def set_next_action(self): inp = raw_input("Action: ") self._next_action = inp # inp = raw_input("Press p or d: ").strip() # while inp not in ("p", "d"): # inp = raw_input("Unknown action {}. Press p or d: ".format(inp)).strip() # data_str = str(self._tracker.next()._avg) # x_coord = float(data_str.split(";")[0]) # rospy.loginfo("x_coord=" + str(x_coord)) # if x_coord < TH1: # direction = "L" # elif x_coord < TH2: # direction = "M" # else: # direction = "R" # if inp == "p": # Pick action # rospy.loginfo("Pick Action in coordinate:") # action = "pick" + direction # elif inp == "d": # rospy.loginfo("Drop Action in coordinate:") # action = "put" + direction # if action == "putM": # Invalid action # action = "" # self._next_action = action def shutdown(self): self._tracker.close() if __name__ == '__main__': try: user = CameraUserServer() while True: user.set_next_action() except rospy.ROSInterruptException: pass finally: print "Shutting down server..." user.shutdown()
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Scripts/Maperipy/CreateOruxMapLite.py
cojalvo/Map
2
129462
<reponame>cojalvo/Map import os, os.path, datetime, string, errno from maperipy import * import GenIsraelHikingTilesLite # http://stackoverflow.com/questions/749711/how-to-get-the-python-exe-location-programmatically MaperitiveDir = os.path.dirname(os.path.dirname(os.path.normpath(os.__file__))) # App.log('MaperitiveDir: ' + MaperitiveDir) ProgramFiles = os.path.normpath(os.path.dirname(MaperitiveDir)) # App.log('ProgramFiles: ' + ProgramFiles) IsraelHikingDir = os.path.dirname(os.path.dirname(os.path.normpath(App.script_dir))) # App.log('App.script_dir: ' + App.script_dir) # App.log('IsraelHikingDir: ' + IsraelHikingDir) App.run_command('change-dir dir="' + IsraelHikingDir +'"') os.chdir(IsraelHikingDir) # # Keep the name of the Tile Upload command # upload_tiles = os.path.join(IsraelHikingDir, "Scripts", "Batch", "UploadTiles.bat") def mkdir_p(path): try: os.makedirs(path) except OSError as exc: # Python >2.5 if exc.errno == errno.EEXIST and os.path.isdir(path): pass else: raise def add_to_PATH(app_dir): full_app_dir=os.path.join(ProgramFiles, app_dir) for path_dir in (string.split(os.environ["PATH"], os.pathsep)): if os.path.basename(path_dir) == app_dir: # Application already found in PATH return if not os.path.isdir(full_app_dir): # Application not a sibling of Maperitive App.log("Warning: " + app_dir + " location not found. Could not add it to PATH.") return os.environ["PATH"] = string.join([os.environ["PATH"],full_app_dir], os.pathsep) # Keep batch windows open up to 24 hours os.environ["NOPAUSE"] = "TIMEOUT /T 86400" # os.rmdir(os.path.join(IsraelHikingDir, 'Site', 'Tiles_Lite' )) gen_cmd = GenIsraelHikingTilesLite.IsraelHikingTileGenCommand() App.run_command("run-script file=" + os.path.join("Scripts", "Maperitive", "IsraelHikingLite.mscript")) # Map Created #Original# App.run_command("generate-tiles minzoom=7 maxzoom=15 subpixel=3 tilesdir=" + IsraelHikingDir + "\Site\Tiles use-fprint=true") gen_cmd.GenToDirectory(16, 16, os.path.join(IsraelHikingDir, 'Site', 'Tiles_Lite')) App.collect_garbage()
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concat_csv.py
jweckman/vim
0
22607
import pandas as pd from pathlib import Path import sys ''' Concatenates all csv files in the folder passed to stdin ''' path = Path(sys.argv[1]) def get_csv_paths(path): return [p for p in path.iterdir() if p.suffix == '.csv'] def ask_details(): print('Please specify the following:') encoding = input('Encoding\n') delimiter = input('Delimiter\n') return encoding, delimiter def get_frames(files_list, encoding, delimiter): return [pd.read_csv(p, sep=delimiter, dtype='str', encoding=encoding) for p in csv_files] def concat_output(frames): output = pd.DataFrame() for df in frames: output = pd.concat([output,df]) path_out = path / 'COMBINED.csv' output.to_csv(path_out, sep=';', index=False) if __name__ == '__main__': csv_files = get_csv_paths(path) encoding, delimiter = ask_details() try: frames = get_frames(csv_files, encoding, delimiter) concat_output(frames) except Exception as e: print('Seems like there were files that could not be read\n') print(str(e)) encoding, delimiter = ask_details() frames = get_frames(csv_files, encoding, delimiter) concat_output(frames)
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tests/test_fasttext_embeddings.py
CLARIN-PL/embeddings
33
156341
<gh_stars>10-100 from typing import Type import pytest import torch from flair.data import Sentence from flair.embeddings import FastTextEmbeddings, StackedEmbeddings from torch.testing import assert_close as assert_close from embeddings.embedding.flair_embedding import FlairDocumentPoolEmbedding from embeddings.embedding.static.embedding import ( AutoStaticDocumentEmbedding, AutoStaticWordEmbedding, ) from embeddings.embedding.static.fasttext import KGR10FastTextConfig, KGR10FastTextEmbedding from embeddings.utils.utils import import_from_string def test_fasttext_embeddings_close(dummy_fasttext_config: KGR10FastTextConfig) -> None: config = dummy_fasttext_config cls: Type[KGR10FastTextEmbedding] = import_from_string(config.model_type_reference) embedding = cls(config) assert_close_embedding_word(embedding) def test_krg10_fasttext_default_config() -> None: config = KGR10FastTextConfig() assert config.model_name == "kgr10.plain.skipgram.dim300.neg10.bin" def test_init_kgr10_fasttext_from_config(dummy_fasttext_config: KGR10FastTextConfig) -> None: config = dummy_fasttext_config embedding = KGR10FastTextEmbedding.from_config(config) assert_close_embedding_word(embedding) def test_static_automodel_word_fast_text(dummy_fasttext_config: KGR10FastTextConfig) -> None: config = dummy_fasttext_config embedding = AutoStaticWordEmbedding.from_config(config=config) assert isinstance(embedding, KGR10FastTextEmbedding) assert_close_embedding_word(embedding) @pytest.fixture def automodel_document_fast_text( dummy_fasttext_config: KGR10FastTextConfig, ) -> FlairDocumentPoolEmbedding: config = dummy_fasttext_config return AutoStaticDocumentEmbedding.from_config(config=config) def test_static_automodel_document_fast_text_structure( automodel_document_fast_text: KGR10FastTextEmbedding, ) -> None: embedding = automodel_document_fast_text assert isinstance(embedding, FlairDocumentPoolEmbedding) assert isinstance(embedding.word_embedding, KGR10FastTextEmbedding) assert isinstance(embedding.model.embeddings, StackedEmbeddings) assert len(embedding.model.embeddings.embeddings) == 1 assert isinstance(embedding.model.embeddings.embeddings[0], FastTextEmbeddings) def test_static_automodel_document_fast_text_close( automodel_document_fast_text: KGR10FastTextEmbedding, ) -> None: embedding = automodel_document_fast_text assert_close_embedding_word(embedding, assert_doc_embedding_empty=False) assert_close_embedding_document(embedding) def assert_close_embedding_word( embedding: KGR10FastTextEmbedding, assert_doc_embedding_empty: bool = True ) -> None: sentence = Sentence("Polska należy do Unii Europejskiej.") embedding.embed([sentence]) assert all(token.embedding.shape == (100,) for token in sentence) tokens_embeddings = torch.stack([token.embedding for token in sentence]) assert_close( tokens_embeddings[:, :5].clone(), torch.Tensor( [ [-1.5600e-03, 7.7694e-03, 4.0358e-03, -3.9865e-03, 1.0068e-02], [1.9560e-04, 5.9088e-03, 4.6389e-03, -4.8860e-04, 5.7465e-03], [1.5331e-03, 6.9973e-03, -1.2511e-03, -6.6496e-03, 1.7792e-03], [-5.3175e-04, 6.8117e-04, 4.8832e-05, -1.9572e-04, 6.4091e-04], [-9.3253e-04, 2.3494e-03, 1.8994e-03, -1.3316e-03, 1.6869e-03], [9.7278e-03, -1.8942e-03, 6.4082e-03, -4.4753e-03, 1.2305e-02], ] ), atol=1e-6, rtol=0, ) torch.testing.assert_close( tokens_embeddings.mean(dim=1), torch.Tensor([7.9601e-04, 7.0972e-04, 4.8373e-05, 2.1889e-05, 2.7810e-04, 9.9517e-04]), atol=1e-6, rtol=0, ) torch.testing.assert_close( tokens_embeddings.std(dim=1), torch.Tensor([0.0045, 0.0029, 0.0036, 0.0019, 0.0020, 0.0058]), atol=1e-4, rtol=0, ) if assert_doc_embedding_empty: assert sentence.embedding.shape == (0,) def assert_close_embedding_document(embedding: KGR10FastTextEmbedding) -> None: sentence = Sentence("Polska należy do Unii Europejskiej.") embedding.embed([sentence]) document_embedding = sentence.embedding assert document_embedding.shape == (100,) assert_close( document_embedding[:5].clone(), torch.Tensor([0.0014, 0.0036, 0.0026, -0.0029, 0.0054]), atol=1e-4, rtol=0, ) torch.testing.assert_close( document_embedding.mean().item(), 0.0005, atol=1e-4, rtol=0, ) torch.testing.assert_close( document_embedding.std().item(), 0.0023, atol=1e-4, rtol=0, )
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validation.py
QCMM/dynqmprop
0
97035
<gh_stars>0 import sys from dynqmprop import DynQMProp top_file = sys.argv[1] coords_file = sys.argv[2] def main(): # creating objects for validation # standard parameters: # radius: 10 # sampling: 25 # n_charge_updates: 3 radius_param = DynQMProp(top_file, coords_file, qm_charge=+1, ligand_selection=':2', receptor_selection=':1') # sampling_param = DynQMProp(top_file, coords_file, qm_charge=+1, ligand_selection=':2', receptor_selection=':1', radius=12, n_charge_updates=1) # n_charge_updates_param = DynQMProp(top_file, coords_file, qm_charge=0, ligand_selection=f':1', radius=10, n_charge_updates=2, sampling_time=1, total_qm_calculations=5) # basis_param = DynQMProp(top_file, coords_file, qm_charge=0, ligand_selection=f':1', radius=10, n_charge_updates=2, sampling_time=1, total_qm_calculations=5, method='HF') # parameter validation run radius_param.validation('radius', [12, 14], overwrite=True, compl=True) # sampling_param.validation('sampling_time', [15, 20, 25, 30, 35, 40], overwrite=True) # n_charge_updates_param.validation( # 'n_charge_updates', [1, 2, 3, 4, 5, 6, 7, 8, 9, 10], overwrite=True) # basis_param.validation( # 'basis', ['def2-SVP', 'def2-TZVP', 'cc-pVDZ', 'cc-pVTZ'], overwrite=True) if __name__ == '__main__': main()
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dev/tasks/run.py
MasonData/dev
12
1611918
<gh_stars>10-100 from typing import Any, Optional from schema import Optional as SchemaOptional from schema import Or, Schema from dev.exceptions import NonZeroReturnCodeError from dev.helpers import run_command from dev.task import Task class Run(Task): __schema__ = Schema( Or( # - run: date str, # - run: # - date # - date [str], # - run: # command: echo $SCOPE # env: # SCOPE: something { 'command': Or(str, [str]), SchemaOptional('env'): {str: str}, SchemaOptional('if'): str, }, ) ) __description__ = 'Run shell args' def up(self, args: Optional[Any], extra_args: Optional[Any]) -> None: if not args: return if isinstance(args, dict): env = args.get('env') if_command = args.get('if') commands_from_args = args['command'] else: env = None if_command = None commands_from_args = args if isinstance(commands_from_args, str): commands = [commands_from_args] else: commands = commands_from_args if if_command: try: run_command(if_command, silent=True) except NonZeroReturnCodeError: ... # If test failed - run command else: return # If test succeeded - do not run command for command in commands: full_command: str = command if extra_args: full_command += " " + " ".join(extra_args) run_command(full_command, env=env)
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tinyforum/models.py
matthiask/django-tinyforum
0
52883
from ckeditor.fields import RichTextField from django.conf import settings from django.db import models from django.urls import reverse from django.utils import timezone from django.utils.html import strip_tags from django.utils.text import Truncator from django.utils.translation import gettext_lazy as _ from html_sanitizer.django import get_sanitizer class BaseQuerySet(models.QuerySet): def visible(self): return self.exclude(moderation_status=self.model.HIDDEN) class BaseModel(models.Model): GOOD = "good" FLAGGED = "flagged" HIDDEN = "hidden" MODERATION_STATUS_CHOICES = ( (GOOD, _("good")), (FLAGGED, _("flagged")), (HIDDEN, _("hidden")), ) MODERATION_ACTION_CHOICES = ( (GOOD, _("approve content")), (HIDDEN, _("hide content")), ) created_at = models.DateTimeField(_("created at"), default=timezone.now) authored_by = models.ForeignKey( settings.AUTH_USER_MODEL, on_delete=models.CASCADE, verbose_name=_("authored by"), ) moderation_status = models.CharField( _("moderation status"), max_length=10, choices=MODERATION_STATUS_CHOICES, default=GOOD, ) objects = BaseQuerySet.as_manager() class Meta: abstract = True class ThreadQuerySet(BaseQuerySet): def active(self): return self.visible().filter(closed_at__isnull=True) def closed(self): return self.visible().filter(closed_at__isnull=False) class Thread(BaseModel): title = models.CharField(_("title"), max_length=200) is_pinned = models.BooleanField( _("is pinned"), default=False, help_text=_("Pinned threads are shown at the top of the thread list."), ) closed_at = models.DateTimeField(_("closed at"), blank=True, null=True) latest_post = models.OneToOneField( "Post", on_delete=models.SET_NULL, related_name="+", blank=True, null=True, verbose_name=_("latest post"), ) post_count = models.IntegerField(_("post count"), default=0) starred_by = models.ManyToManyField( settings.AUTH_USER_MODEL, blank=True, related_name="starred_threads", verbose_name=_("starred by"), ) objects = ThreadQuerySet.as_manager() class Meta: ordering = ["-is_pinned", "-latest_post__created_at", "-created_at"] verbose_name = _("thread") verbose_name_plural = _("threads") def __str__(self): return self.title def get_absolute_url(self): if self.moderation_status == self.HIDDEN: return reverse("tinyforum:thread-list") return reverse("tinyforum:thread-detail", kwargs={"pk": self.pk}) def save(self, *args, **kwargs): if self.pk: self.post_count = self.posts.visible().count() self.latest_post = self.posts.visible().last() super().save(*args, **kwargs) save.alters_data = True class Post(BaseModel): thread = models.ForeignKey( Thread, on_delete=models.CASCADE, verbose_name=_("thread"), related_name="posts" ) text = RichTextField(_("text"), config_name="tinyforum-post") class Meta: ordering = ["created_at"] verbose_name = _("post") verbose_name_plural = _("post") def __str__(self): return Truncator(strip_tags(self.text)).words(20, truncate="...") def save(self, *args, **kwargs): self.text = get_sanitizer("tinyforum-post").sanitize(self.text) super().save(*args, **kwargs) self.thread.save() save.alters_data = True class Report(BaseModel): REASON_CHOICES = ( ("annoying", _("It's annoying or not interesting")), ("misplaced", _("I think it shouldn't be here")), ("spam", _("It's spam")), ) reason = models.CharField(_("reason"), max_length=10, choices=REASON_CHOICES) notes = models.TextField( _("notes"), blank=True, help_text=_("Anything else you want to say?") ) handled_at = models.DateTimeField(_("handled at"), blank=True, null=True) handled_by = models.ForeignKey( settings.AUTH_USER_MODEL, on_delete=models.PROTECT, blank=True, null=True, verbose_name=_("handled by"), related_name="+", ) # Override BaseModel.moderation_status with a blank=True version moderation_status = models.CharField( _("moderation status"), max_length=10, choices=BaseModel.MODERATION_STATUS_CHOICES, default=BaseModel.FLAGGED, ) class Meta: abstract = True class PostReport(Report): post = models.ForeignKey( Post, on_delete=models.CASCADE, related_name="reports", verbose_name=_("post") ) class Meta: unique_together = (("authored_by", "post"),) verbose_name = _("post report") verbose_name_plural = _("post reports")
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tests/test_basic.py
WSULib/combine
24
24382
<reponame>WSULib/combine import django import os import pytest import shutil import sys import time import uuid # logging import logging logger = logging.getLogger(__name__) logger.setLevel(logging.DEBUG) # init django settings file to retrieve settings os.environ['DJANGO_SETTINGS_MODULE'] = 'combine.settings' sys.path.append('/opt/combine') django.setup() # import core from core.models import Organization, RecordGroup, CombineJob, HarvestStaticXMLJob, QueryDict, Transformation,\ TransformJob, ValidationScenario, MergeJob ############################################################################# # Tests Setup ############################################################################# @pytest.mark.run(order=1) def test_organization_create(VO): ''' Test creation of organization ''' # instantiate and save VO.org = Organization( name='test_org_%s' % uuid.uuid4().hex, description='' ) VO.org.save() assert type(VO.org.id) == int @pytest.mark.run(order=2) def test_record_group_create(VO): ''' Test creation of record group ''' # instantiate and save VO.rg = RecordGroup( organization=VO.org, name='test_record_group_%s' % uuid.uuid4().hex, description='' ) VO.rg.save() assert type(VO.rg.id) == int ############################################################################# # Test Harvest ############################################################################# @pytest.mark.run(order=3) def test_static_harvest(VO): ''' Test static harvest of XML records from disk ''' # copy test data to /tmp payload_dir = '/tmp/%s' % uuid.uuid4().hex shutil.copytree('/opt/combine/tests/data/static_harvest_data', payload_dir) # emulate request.POST request_dict = { 'dbdd': '', 'job_note': '', 'xpath_record_id': '', 'static_filepath': payload_dir, 'fm_config_json': '{"add_literals":{},"capture_attribute_values":[],"concat_values_on_all_fields":false,"concat_values_on_fields":{},"copy_to":{},"copy_to_regex":{},"copy_value_to_regex":{},"error_on_delims_collision":false,"exclude_attributes":[],"exclude_elements":[],"include_all_attributes":false,"include_attributes":[],"include_sibling_id":false,"multivalue_delim":"|","node_delim":"_","ns_prefix_delim":"|","remove_copied_key":true,"remove_copied_value":false,"remove_ns_prefix":true,"repeating_element_suffix_count":false,"self_describing":false,"skip_attribute_ns_declarations":true,"skip_repeating_values":true,"skip_root":false,"split_values_on_all_fields":false,"split_values_on_fields":{}}', 'static_payload': '', 'job_name': '', 'field_mapper': 'default', 'rits': '', 'additional_namespace_decs': 'xmlns:mods="http://www.loc.gov/mods/v3"', 'document_element_root': 'mods:mods' } query_dict = QueryDict('', mutable=True) query_dict.update(request_dict) # init job, using Variable Object (VO) cjob = CombineJob.init_combine_job( user=VO.user, record_group=VO.rg, job_type_class=HarvestStaticXMLJob, job_params=query_dict, files={}, hash_payload_filename=False ) # start job and update status job_status = cjob.start_job() # if job_status is absent, report job status as failed if job_status == False: cjob.job.status = 'failed' cjob.job.save() # poll until complete for x in range(0, 480): # pause time.sleep(1) # refresh session cjob.job.update_status() # check status if cjob.job.status != 'available': continue else: break # save static harvest job to VO VO.static_harvest_cjob = cjob # remove payload_dir shutil.rmtree(payload_dir) # assert job is done and available via livy assert VO.static_harvest_cjob.job.status == 'available' # assert record count is 250 assert VO.static_harvest_cjob.job.record_count == 250 # assert no indexing failures assert len(VO.static_harvest_cjob.get_indexing_failures()) == 0 # ############################################################################# # # Test Transform # ############################################################################# def prepare_transform(): ''' Create temporary transformation scenario based on tests/data/mods_transform.xsl ''' with open('tests/data/mods_transform.xsl', 'r') as f: xsl_string = f.read() trans = Transformation( name='temp_mods_transformation', payload=xsl_string, transformation_type='xslt', filepath='will_be_updated' ) trans.save() # return transformation return trans @pytest.mark.run(order=4) def test_static_transform(VO): ''' Test static harvest of XML records from disk ''' # prepare and capture temporary transformation scenario VO.transformation_scenario = prepare_transform() # emulate request.POST request_dict = { 'dbdd': '', 'field_mapper': 'default', 'filter_dupe_record_ids': 'true', 'fm_config_json': '{"add_literals":{},"capture_attribute_values":[],"concat_values_on_all_fields":false,"concat_values_on_fields":{},"copy_to":{},"copy_to_regex":{},"copy_value_to_regex":{},"error_on_delims_collision":false,"exclude_attributes":[],"exclude_elements":[],"include_all_attributes":false,"include_attributes":[],"include_sibling_id":false,"multivalue_delim":"|","node_delim":"_","ns_prefix_delim":"|","remove_copied_key":true,"remove_copied_value":false,"remove_ns_prefix":true,"repeating_element_suffix_count":false,"self_describing":false,"skip_attribute_ns_declarations":true,"skip_repeating_values":true,"skip_root":false,"split_values_on_all_fields":false,"split_values_on_fields":{}}', 'input_es_query_valve': '', 'input_job_id': VO.static_harvest_cjob.job.id, 'input_numerical_valve': '', 'input_validity_valve': 'all', 'job_name': '', 'job_note': '', 'rits': '', 'sel_trans_json': '[{"index":0,"trans_id":%s}]' % VO.transformation_scenario.id } query_dict = QueryDict('', mutable=True) query_dict.update(request_dict) # init job cjob = CombineJob.init_combine_job( user=VO.user, record_group=VO.rg, job_type_class=TransformJob, job_params=query_dict) # start job and update status job_status = cjob.start_job() # if job_status is absent, report job status as failed if job_status == False: cjob.job.status = 'failed' cjob.job.save() # poll until complete for x in range(0, 480): # pause time.sleep(1) # refresh session cjob.job.update_status() # check status if cjob.job.status != 'available': continue else: break # save static harvest job to VO VO.static_transform_cjob = cjob # assert job is done and available via livy assert VO.static_transform_cjob.job.status == 'available' # assert record count is 250 assert VO.static_transform_cjob.job.record_count == 250 # assert no indexing failures assert len(VO.static_transform_cjob.get_indexing_failures()) == 0 # remove transformation assert VO.transformation_scenario.delete()[0] > 0 # ############################################################################# # # Test Validation Scenarios # ############################################################################# @pytest.mark.run(order=5) def test_add_schematron_validation_scenario(VO): ''' Add schematron validation ''' # get schematron validation from test data with open('tests/data/schematron_validation.sch', 'r') as f: sch_payload = f.read() # init new validation scenario schematron_validation_scenario = ValidationScenario( name='temp_vs_%s' % str(uuid.uuid4()), payload=sch_payload, validation_type='sch', default_run=False ) schematron_validation_scenario.save() # pin to VO VO.schematron_validation_scenario = schematron_validation_scenario # assert creation assert type(VO.schematron_validation_scenario.id) == int @pytest.mark.run(order=6) def test_add_python_validation_scenario(VO): ''' Add python code snippet validation ''' # get python validation from test data with open('tests/data/python_validation.py', 'r') as f: py_payload = f.read() # init new validation scenario python_validation_scenario = ValidationScenario( name='temp_vs_%s' % str(uuid.uuid4()), payload=py_payload, validation_type='python', default_run=False ) python_validation_scenario.save() # pin to VO VO.python_validation_scenario = python_validation_scenario # assert creation assert type(VO.python_validation_scenario.id) == int @pytest.mark.run(order=7) def test_schematron_validation(VO): # get target records VO.harvest_record = VO.static_harvest_cjob.job.get_records().first() VO.transform_record = VO.static_transform_cjob.job.get_records().first() # validate harvest record with schematron ''' expecting failure count of 2 ''' vs_results = VO.schematron_validation_scenario.validate_record(VO.harvest_record) assert vs_results['parsed']['fail_count'] == 2 # validate transform record with schematron ''' expecting failure count of 1 ''' vs_results = VO.schematron_validation_scenario.validate_record(VO.transform_record) assert vs_results['parsed']['fail_count'] == 1 @pytest.mark.run(order=8) def test_python_validation(VO): # validate harvest record with python ''' expecting failure count of 1 ''' vs_results = VO.python_validation_scenario.validate_record(VO.harvest_record) print(vs_results) assert vs_results['parsed']['fail_count'] == 1 # validate transform record with python ''' expecting failure count of 1 ''' vs_results = VO.python_validation_scenario.validate_record(VO.transform_record) print(vs_results) assert vs_results['parsed']['fail_count'] == 1 # ############################################################################# # # Test Duplicate/Merge Job # ############################################################################# @pytest.mark.run(order=9) def test_merge_duplicate(VO): ''' Duplicate Transform job, applying newly created validation scenarios ''' # emulate request.POST request_dict = { 'dbdd': '', 'field_mapper': 'default', 'filter_dupe_record_ids': 'true', 'fm_config_json': '{"add_literals":{},"capture_attribute_values":[],"concat_values_on_all_fields":false,"concat_values_on_fields":{},"copy_to":{},"copy_to_regex":{},"copy_value_to_regex":{},"error_on_delims_collision":false,"exclude_attributes":[],"exclude_elements":[],"include_all_attributes":false,"include_attributes":[],"include_sibling_id":false,"multivalue_delim":"|","node_delim":"_","ns_prefix_delim":"|","remove_copied_key":true,"remove_copied_value":false,"remove_ns_prefix":true,"repeating_element_suffix_count":false,"self_describing":false,"skip_attribute_ns_declarations":true,"skip_repeating_values":true,"skip_root":false,"split_values_on_all_fields":false,"split_values_on_fields":{}}', 'input_es_query_valve': '', 'input_numerical_valve': '', 'input_validity_valve': 'all', 'job_name': '', 'job_note': '', 'rits': '' } query_dict = QueryDict('', mutable=True) query_dict.update(request_dict) # set input jobs with QueryDict.setlist query_dict.setlist('input_job_id', [ VO.static_harvest_cjob.job.id, VO.static_transform_cjob.job.id ]) # set validation scenarios with QueryDict.setlist query_dict.setlist('validation_scenario', [ VO.schematron_validation_scenario.id, VO.python_validation_scenario.id ]) # init job cjob = CombineJob.init_combine_job( user=VO.user, record_group=VO.rg, job_type_class=MergeJob, job_params=query_dict) # start job and update status job_status = cjob.start_job() # if job_status is absent, report job status as failed if job_status == False: cjob.job.status = 'failed' cjob.job.save() # poll until complete for x in range(0, 480): # pause time.sleep(1) # refresh session cjob.job.update_status() # check status if cjob.job.status != 'available': continue else: break # save static harvest job to VO VO.merge_cjob = cjob # assert job is done and available via livy assert VO.merge_cjob.job.status == 'available' # assert record count is 250 assert VO.merge_cjob.job.record_count == 250 # assert validation scenarios applied job_validation_scenarios = VO.merge_cjob.job.jobvalidation_set.all() assert job_validation_scenarios.count() == 2 # loop through validation scenarios and confirm that both show 250 failures for jv in job_validation_scenarios: assert jv.get_record_validation_failures().count() == 232 # assert no indexing failures assert len(VO.merge_cjob.get_indexing_failures()) == 0 ############################################################################# # Tests Teardown ############################################################################# @pytest.mark.last def test_teardown(keep_records, VO): ''' Test teardown ''' # assert delete of org and children if not keep_records: assert VO.org.delete()[0] > 0 else: assert True assert VO.schematron_validation_scenario.delete()[0] > 0 assert VO.python_validation_scenario.delete()[0] > 0
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gcp-cli/client/util/util_dpm.py
lacework/csp-integrations
1
48359
<filename>gcp-cli/client/util/util_dpm.py from __future__ import print_function from __future__ import absolute_import from builtins import input from builtins import str import logging from .util_base import UtilBase from . import util_template HTTP_GET_METHOD = "GET" HTTP_POST_METHOD = "POST" HTTP_DELETE_METHOD = "DELETE" SERVICE_ACCOUNT_ID = "lacework-cfg-sa" GET_DEPLOYMENT_URL= "https://www.googleapis.com/deploymentmanager/v2/projects/%projectId/global/deployments/%deployment" GET_DEPLOYMENTS_URL= "https://www.googleapis.com/deploymentmanager/v2/projects/%projectId/global/deployments" from client.config.client_helper import ClientHelper import time SLEEP_SECS = 20 class UtilDpm(UtilBase): def __init__(self): UtilBase.__init__(self) def checkIfDeploymentExists(self, projectId, deployment): isinstance(self.getHttpClient(), ClientHelper) url = GET_DEPLOYMENT_URL.replace("%deployment", deployment) deployment = self.getHttpClient().make_request(HTTP_GET_METHOD, url, projectId, None) if deployment['isError']: if deployment['defaultErrorObject'].get("status") == 404: return False else: raise Exception("Error fetching deployment: \n" + str(deployment['defaultErrorObject'])) return True def getDeploymentDetails(self, projectId, deployment): isinstance(self.getHttpClient(), ClientHelper) url = GET_DEPLOYMENT_URL.replace("%deployment", deployment) deployment = self.getHttpClient().make_request(HTTP_GET_METHOD, url, projectId, None) if deployment['isError']: raise Exception("Error fetching deployment: \n" + str(deployment['defaultErrorObject'])) return deployment["data"] def deploymentWait(self, setupProjectId, deploymentName): while (True): deployment = self.getDeploymentDetails(setupProjectId, deploymentName) if (deployment["operation"]["status"] == "DONE" and "error" in deployment["operation"]): logging.warning("Deployment has failed, please run again and check configuration") logging.warning("Rolling back and deleting failed deployment") self.deleteDeployment(setupProjectId, deploymentName) logging.error(str(deployment["operation"]["error"])) return None elif (deployment["operation"]["status"] == "RUNNING"): if (deployment["operation"]["operationType"] == "insert"): logging.info("Deployment is running! Sleeping for " + str(SLEEP_SECS) + " seconds before checking again") print("Deployment is running! Sleeping for " + str(SLEEP_SECS) + " seconds before checking again") time.sleep(SLEEP_SECS) else: raise Exception("The deployment with name " + deploymentName + " is being used or being deleted, please wait until all operations are done!") else: logging.info("Deployment has been created and successfully deployed!") return self.getDeploymentOutput(deployment["manifest"]) def getDeploymentOutput(self, url): isinstance(self.getHttpClient(), ClientHelper) manifest = self.getHttpClient().make_request(HTTP_GET_METHOD, url, None, None) if manifest['isError']: raise Exception("Error fetching deployment: \n" + str(manifest["defaultErrorObject"])) return manifest["data"]["layout"] def deleteDeployment(self, projectId, deploymentName): isinstance(self.getHttpClient(), ClientHelper) logging.info("Deleting deployment with name: " + deploymentName) url = GET_DEPLOYMENT_URL.replace("%deployment", deploymentName) deployment = self.getHttpClient().make_request(HTTP_DELETE_METHOD, url, projectId, None) if deployment['isError']: raise Exception("Error deleting deployment: \n" + str(deployment['defaultErrorObject'])) logging.info("Deployment with name " + deploymentName + " has been deleted") return deployment['data'] def createDeployment(self, config, deploymentName): logging.info("Creating the request body to be sent to the deployment manager") body = self.buildDeploymentBody(config, deploymentName) projectId = config.getSetupProjectId() isinstance(self.getHttpClient(), ClientHelper) logging.info("Creating new deployment named " + deploymentName + " in project " + projectId) deployment = self.getHttpClient().make_request(HTTP_POST_METHOD, GET_DEPLOYMENTS_URL, projectId, body) if deployment['isError']: raise Exception("Error creating deployment: \n" + str(deployment['defaultErrorObject'])) return deployment['data'] def buildDeploymentBody(self, config, deploymentName): setupPrefix = config.getSetupPrefix() projectId = config.getSetupProjectId() resources = util_template.SERVICE_ACCOUNT if (config.isAuditLogSetup()): if (not config.doesBucketExist()): resources = resources + util_template.BUCKET_CREATION resources = resources + util_template.TOPIC_CREATION resources = resources + util_template.SUBSCRIPTION_CREATION resources = resources + util_template.NOTIFICATION_CREATION idType = config.getAuditSetupType() id = config.getAuditSetupId() sinkAndBucketBinding = util_template.SINK_CREATION if not config.doesBucketExist(): sinkAndBucketBinding += util_template.BUCKET_DEPENDENCY sinkAndBucketBinding += util_template.BUCKET_BINDING if (idType == "ORGANIZATION"): sinkAndBucketBinding = sinkAndBucketBinding.replace("%resourceTypeAudit", "organizations") sinkAndBucketBinding = sinkAndBucketBinding.replace("%resourceTypeSingle", "organization") elif (idType == "PROJECT"): sinkAndBucketBinding = sinkAndBucketBinding.replace("%resourceTypeAudit", "projects") sinkAndBucketBinding = sinkAndBucketBinding.replace("%resourceTypeSingle", "project") else: sinkAndBucketBinding = sinkAndBucketBinding.replace("%resourceTypeAudit", "folders") sinkAndBucketBinding = sinkAndBucketBinding.replace("%resourceTypeSingle", "folder") sinkAndBucketBinding = sinkAndBucketBinding.replace("%resourceIdAudit", id) sinkAndBucketBinding = sinkAndBucketBinding.replace("%sinkProp", setupPrefix + "-" + id + "-lacework-sink") sinkAndBucketBinding = sinkAndBucketBinding.replace("%bucketBindingName", setupPrefix+ "-" + id + "-bucket-binding") resources = resources + sinkAndBucketBinding if config.customRole(): resources = resources + util_template.CUSTOM_ROLE resources = resources + util_template.ASSIGN_ROLE resources = resources + util_template.VIEWER_BINDING resources = resources + util_template.SECURITY_REVIEWER_BINDING if (config.getComplianceSetupType() == "ORGANIZATION"): resources = resources + util_template.ORG_VIEWER_BINDING resources = resources + util_template.ACCOUNT_KEY resources = resources + util_template.OUTPUT resources = resources + util_template.OUTPUT_KEY if (config.isAuditLogSetup()): if config.doesBucketExist(): resources = resources + util_template.OUTPUT_SINK else: resources = resources + util_template.OUTPUT_SUBSCRIPTION id = config.getAuditSetupId() resources = resources.replace("%sinkName", setupPrefix + "-" + projectId + "-" + id + "-lacework-sink") if config.customRole(): if (config.getComplianceSetupType() == "ORGANIZATION"): resources = resources.replace("%customRole", setupPrefix + "-lacework-custom-role-org") resources = resources.replace("%roleType", "organizations") resources = resources.replace("%roleId", setupPrefix.replace("-","") + config.getComplianceSetupId() + "laceworkCustomRoleOrg") resources = resources.replace("%roleParent", "organizations/" + config.getComplianceSetupId()) elif (config.getComplianceSetupType() == "PROJECT"): resources = resources.replace("%customRole", setupPrefix + "-lacework-custom-role-project") resources = resources.replace("%roleId", setupPrefix.replace("-","") + projectId.replace("-", "") + "laceworkCustomRoleProject") resources = resources.replace("%roleType", "projects") resources = resources.replace("%roleParent", "projects/" + projectId) resources = resources.replace("%setRoleName", setupPrefix + "-lacework-role-assignment") resources = resources.replace("%serviceAccountName", setupPrefix + "-" + projectId + "-" + "lacework-serviceaccnt") resources = resources.replace("%serviceAccountId", setupPrefix + "-" + SERVICE_ACCOUNT_ID) if config.doesBucketExist(): resources = resources.replace("$(ref.%bucketName.name)", config.getExistingBucketName()) resources = resources.replace("%projectNumber", config.getBucketParent()) else: resources = resources.replace("%bucketName", setupPrefix + "-" + projectId + "-" + "lacework-bucket") resources = resources.replace("%projectNumber", config.getSetupProjectNumber()) resources = resources.replace("%projectId", projectId) resources = resources.replace("%topicName", setupPrefix + "-" + projectId + "-" + "lacework-topic") resources = resources.replace("%topicProp", setupPrefix + "-" + projectId + "-" + "lacework-topic-prop") resources = resources.replace("%subscriptionName", setupPrefix + "-" + projectId + "-" + "lacework-subscription") resources = resources.replace("%subscriptionProp", setupPrefix + "-" + projectId + "-" + "lacework-subscription-prop") resources = resources.replace("%notificationName", setupPrefix + "-" + projectId + "-" + "lacework-notification") resources = resources.replace("%setupPrefix", setupPrefix) if (config.getComplianceSetupType() == "ORGANIZATION"): resources = resources.replace("%resourceType", "organizations") resources = resources.replace("%resourceId", "organizations/" + config.getComplianceSetupId()) else: resources = resources.replace("%resourceType", "projects") resources = resources.replace("%resourceId", projectId) print(resources) print("Please review the above configuration to be deployed") if config.getToIntegrate(): print("This deployment will be integrated with following lacework account: " + config.getLaceworkAccount()) while (True): userInput = input("Accept? (Y/N): ") userInput = userInput.lower() if (userInput == "n" or userInput == "no"): raise Exception("Created configuration rejected by user, please check the config.yml") elif (userInput == "y" or userInput == "yes"): body = { "name" : deploymentName, "target" : { "config" : { "content" : resources } } } return body else: print ("Please enter valid input")
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Software_Engineering/ObjectOrientedProgramming/IdeFiles/5_exercise_upload_to_pypi/setup.py
surily/Udacity-Data-Science
0
43665
<reponame>surily/Udacity-Data-Science from setuptools import setup setup(name='gaussian_bionary_dist_prob', version='0.1', description='Gaussian and Binomial distributions', packages=['gaussian_bionary_dist_prob'], author = '<NAME>', author_email = '<EMAIL>', zip_safe=False)
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examples/exp_configs/rl/singleagent/singleagent_ring_attack.py
cwang717/flow
0
69596
<filename>examples/exp_configs/rl/singleagent/singleagent_ring_attack.py """Ring road example. Trains a single autonomous vehicle to stabilize the flow of 21 human-driven vehicles in a variable length ring road. """ from flow.core.params import SumoParams, EnvParams, InitialConfig, NetParams from flow.core.params import VehicleParams, SumoCarFollowingParams from flow.controllers import RLController, IDMController, ContinuousRouter from flow.envs import WaveAttenuationPOEnv, DisguisedAttackPOEnv from flow.networks import RingNetwork # time horizon of a single rollout HORIZON = 3000 # number of rollouts per training iteration N_ROLLOUTS = 20 # number of parallel workers N_CPUS = 2 # We place one autonomous vehicle and 22 human-driven vehicles in the network vehicles = VehicleParams() vehicles.add( veh_id="human", acceleration_controller=(IDMController, { "noise": 0.2 }), car_following_params=SumoCarFollowingParams( min_gap=0 ), routing_controller=(ContinuousRouter, {}), num_vehicles=21) vehicles.add( veh_id="rl", acceleration_controller=(RLController, {}), routing_controller=(ContinuousRouter, {}), num_vehicles=1) flow_params = dict( # name of the experiment #exp_tag="stabilizing_the_ring", exp_tag="disguised_vehicle_attacker", # name of the flow environment the experiment is running on #env_name=WaveAttenuationPOEnv, env_name=DisguisedAttackPOEnv, # name of the network class the experiment is running on network=RingNetwork, # simulator that is used by the experiment simulator='traci', # sumo-related parameters (see flow.core.params.SumoParams) sim=SumoParams( sim_step=0.1, render=False, restart_instance=False ), # environment related parameters (see flow.core.params.EnvParams) env=EnvParams( horizon=HORIZON, warmup_steps=750, clip_actions=False, additional_params={ "max_accel": 1, "max_decel": 1, "ring_length": [220, 270], }, ), # network-related parameters (see flow.core.params.NetParams and the # network's documentation or ADDITIONAL_NET_PARAMS component) net=NetParams( additional_params={ "length": 260, "lanes": 1, "speed_limit": 30, "resolution": 40, }, ), # vehicles to be placed in the network at the start of a rollout (see # flow.core.params.VehicleParams) veh=vehicles, # parameters specifying the positioning of vehicles upon initialization/ # reset (see flow.core.params.InitialConfig) initial=InitialConfig(), )
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python/Unimeta/clinica/Trabalho_3/trabalho3.py
alifoliveira/rep-estudos
0
156444
<reponame>alifoliveira/rep-estudos<filename>python/Unimeta/clinica/Trabalho_3/trabalho3.py #coding=utf-8 from tkinter import * from tkinter import messagebox as ms import sqlite3 cont = 0 cont2 = 2 cadt = None listr = None empr = None loged = None photo2 = None logo2 = None def verify(): global loged global cont2 global cont global photo2 global logo2 with sqlite3.connect('registro.db') as db: c = db.cursor() find_user = 'SELECT * FROM usuario WHERE login = ? AND senha = ?' c.execute(find_user,[(entry_user.get()), (entry_password.get())]) result = c.fetchall() if result: label_user.destroy() entry_user.destroy() label_password.destroy() entry_password.destroy() bt_login.destroy() bt_leave.destroy() logo.destroy() main() photo2 = PhotoImage(file='logo-biblioteca-menu.png') logo2 = Label(root, image=photo2, bg='#292929') logo2.pack(padx=20, pady=20) loged = Label(root, text='Bem Vindo!', font=('', 20, 'bold'), bg='#292929', fg='white', pady=20) loged.pack(side=BOTTOM) else: ms.showerror('ERRO', f'Usuário ou Senha Inválidos. \n\nTentativas restantes: {cont2}') cont2 -= 1 cont += 1 if cont == 3: ms.showwarning('Aviso', 'O Sistema será finalizado por questões de segurança.') root.destroy() def main(): barra_menu = Menu(root) main_menu = Menu(barra_menu, tearoff=0) barra_menu.add_cascade(label='Menu', menu=main_menu) main_menu.add_command(label='Cadastrar', command=cadastrar) main_menu.add_command(label='Listar', command=listar) main_menu.add_command(label='Empréstimo', command=emprestimo) main_menu.add_separator() main_menu.add_command(label='Sair', command=root.destroy) root.config(menu=barra_menu) def cadastrar(): global cadt try: loged.destroy() logo2.destroy() cadt.destroy() listr.destroy() empr.destroy() except: pass cadt = Frame(root, bg='#292929', width=400, height=300) cadt.pack(fill=BOTH, expand=1) bt_autor = Button(cadt, width=10, text='Autor', font=('', 12, 'bold'), fg='white', bg='#5bc30b') bt_autor.place(x=140, y=60) bt_cliente = Button(cadt, width=10, text='Cliente', font=('', 12, 'bold'), fg='white', bg='#5bc30b', command=cliente) bt_cliente.place(x=140, y=100) bt_livro = Button(cadt, width=10, text='Livro', font=('', 12, 'bold'), fg='white', bg='#5bc30b') bt_livro.place(x=140, y=140) bt_usuario = Button(cadt, width=10, text='Usuário', font=('', 12, 'bold'), fg='white', bg='#5bc30b') bt_usuario.place(x=140, y=180) def listar(): global listr try: loged.destroy() logo2.destroy() listr.destroy() empr.destroy() cadt.destroy() except: pass listr = Frame(root, bg='#292929', width=400, height=300) listr.pack(fill=BOTH, expand=1) bt_autor = Button(listr, width=10, text='Autor', font=('', 12, 'bold'), fg='white', bg='#5bc30b') bt_autor.place(x=140, y=60) bt_cliente = Button(listr, width=10, text='Cliente', font=('', 12, 'bold'), fg='white', bg='#5bc30b') bt_cliente.place(x=140, y=100) bt_livro = Button(listr, width=10, text='Livro', font=('', 12, 'bold'), fg='white', bg='#5bc30b') bt_livro.place(x=140, y=140) bt_usuario = Button(listr, width=10, text='Usuário', font=('', 12, 'bold'), fg='white', bg='#5bc30b') bt_usuario.place(x=140, y=180) bt_emprestimo = Button(listr, width=10, text='Empréstimos', font=('', 12, 'bold'), fg='white', bg='#5bc30b') bt_emprestimo.place(x=140, y=220) def emprestimo(): global empr try: loged.destroy() logo2.destroy() empr.destroy() cadt.destroy() listr.destroy() except: pass empr = Frame(root, bg='#292929', width=400, height=300) empr.pack(fill=BOTH, expand=1) bt_emprestimo = Button(empr, width=18, text='Realizar Empréstimo', font=('', 12, 'bold'), fg='white', bg='#5bc30b') bt_emprestimo.place(x=110, y=80) bt_devolucao = Button(empr, width=18, text='Realizar Devolução', font=('', 12, 'bold'), fg='white', bg='#5bc30b') bt_devolucao.place(x=110, y=120) def cliente(): db = sqlite3.connect('registro.db') c = db.cursor() c.execute('''CREATE TABLE IF NOT EXISTS cliente( id INTEGER PRIMARY KEY NOT NULL, nome TEXT NOT NULL, rua TEXT NOT NULL, numero INTEGER NOT NULL, bairro TEXT NOT NULL, cidade TEXT NOT NULL, estado TEXT NOT NULL, data_de_nascimento DATE NOT NULL, telefone_residencial TEXT, telefone_celular TEXT NOT NULL, email TEXT NOT NULL, cpf TEXT NOT NULL );''') window_cliente = Toplevel(root, bg='#292929') window_cliente.title('Cadastrar Cliente') lnome = Label(window_cliente, text='Nome', bg='#292929', fg='white', font=('', 12, 'bold')) lnome.place(x=20, y=20) nome = Entry(window_cliente, width=45, font=('', 11, 'bold')) nome.place(x=20, y=50) lcpf = Label(window_cliente, text='CPF', bg='#292929', fg='white', font=('', 12, 'bold')) lcpf.place(x=20, y=80) cpf = Entry(window_cliente, width=12, font=('', 11, 'bold')) cpf.place(x=20, y=110) ltelefone = Label(window_cliente, text='Telefone', bg='#292929', fg='white', font=('', 12, 'bold')) ltelefone.place(x=150, y=80) telefone = Entry(window_cliente, width=12, font=('', 11, 'bold')) telefone.place(x=150, y=110) lcelular = Label(window_cliente, text='Celular', bg='#292929', fg='white', font=('', 12, 'bold')) lcelular.place(x=283, y=80) celular = Entry(window_cliente, width=12, font=('', 11, 'bold')) celular.place(x=283, y=110) lemail = Label(window_cliente, text='E-mail', bg='#292929', fg='white', font=('', 12, 'bold')) lemail.place(x=20, y=140) email = Entry(window_cliente, width=45, font=('', 11, 'bold')) email.place(x=20, y=170) lrua = Label(window_cliente, text='Rua', bg='#292929', fg='white', font=('', 12, 'bold')) lrua.place(x=20, y=200) rua = Entry(window_cliente, width=45, font=('', 11, 'bold')) rua.place(x=20, y=230) lnumero = Label(window_cliente, text='Número', bg='#292929', fg='white', font=('', 12, 'bold')) lnumero.place(x=300, y=260) numero = Entry(window_cliente, width=10, font=('', 11, 'bold')) numero.place(x=300, y=290) lbairro = Label(window_cliente, text='Bairro', bg='#292929', fg='white', font=('', 12, 'bold')) lbairro.place(x=20, y=260) bairro = Entry(window_cliente, width=31, font=('', 11, 'bold')) bairro.place(x=20, y=290) lcidade = Label(window_cliente, text='Cidade', bg='#292929', fg='white', font=('', 12, 'bold')) lcidade.place(x=20, y=320) cidade = Entry(window_cliente, width=23, font=('', 11, 'bold')) cidade.place(x=20, y=350) lestado = Label(window_cliente, text='Estado', bg='#292929', fg='white', font=('', 12, 'bold')) lestado.place(x=235, y=320) estado = Entry(window_cliente, width=18, font=('', 11, 'bold')) estado.place(x=235, y=350) window_cliente.geometry('400x550+200+200') db.commit() db.close() root = Tk() photo = PhotoImage(file='logo-biblioteca.png') logo = Label(root, image=photo, bg='#292929') logo.pack(pady=20) label_user = Label(root, text='Usuário:', font=('', 12), fg='gray', bg='#292929') label_user.place(x=30, y=120) entry_user = Entry(root, justify=CENTER, font=('', 11, 'bold'), width=26) entry_user.place(x=100, y=120) label_password = Label(root, text='Senha:', font=('', 12), fg='gray', bg='#292929') label_password.place(x=40, y=150) entry_password = Entry(root, justify=CENTER, font=('', 11, 'bold'), show='*', width=26) entry_password.place(x=100, y=150) bt_login = Button(root, width=8, text='LOGIN', font=('', 12, 'bold'), bg='#5bc30b', fg='white', command=verify) bt_login.place(x=100, y=200) bt_leave = Button(root, width=8, text='SAIR', font=('', 12, 'bold'), bg='#5bc30b', fg='white', command=root.quit) bt_leave.place(x=223, y=200) root.title('Login') root['bg'] = '#292929' root.geometry('400x300+600+300') root.resizable(0, 0) root.mainloop()
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tests/basic_stages/test_freq_drop.py
DavidKatz-il/pdpipe
438
182234
"""Testing basic pipeline stages.""" import pandas as pd from pdpipe.basic_stages import FreqDrop DF1 = pd.DataFrame([[1, 4], [4, 5], [1, 11]], [1, 2, 3], ['a', 'b']) def test_freqdrop_basic(): """Testing the FreqDrop pipeline stage.""" res_df = FreqDrop(2, 'a').apply(DF1) assert 1 in res_df.index assert 2 not in res_df.index assert 3 in res_df.index def test_freqdrop_verbose(): """Testing the FreqDrop pipeline stage.""" res_df = FreqDrop(2, 'a').apply(DF1, verbose=True) assert 1 in res_df.index assert 2 not in res_df.index assert 3 in res_df.index
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src/clophfit/old/dil_correction.py
darosio/ClopHfit
0
44403
#!/usr/bin/python # import argparse import os import pandas as pd corr = {'pH': [1, 1.02, 1.04, 1.06, 1.08, 1.1, 1.12], 'cl': [1.000000, 1.017857, 1.035714, 1.053571, 1.071429, 1.089286, 1.107143, 1.160714, 1.196429]} corr = {'pH': [1, 1.02, 1.04, 1.06, 1.08, 1.1], 'cl': [1.000000, 1.017857, 1.035714, 1.053571, 1.071429, 1.089286, 1.107143, 1.160714, 1.196429]} def main(): description = "make correction for dilution" parser = argparse.ArgumentParser(description=description) parser.add_argument('ffile', help="a file x y1 y2 --> y1*corr y2*corr") parser.add_argument('out', help="destination directory") parser.add_argument('buffer', nargs=2, help="buffer values for y1 y2") parser.add_argument("-t", "--titration-of", action="store", default="pH", choices=["pH", "cl"], dest='titration_type') args = parser.parse_args() df = pd.read_csv(args.ffile) df.y1 -= float(args.buffer[0]) df.y2 -= float(args.buffer[1]) df.y1 *= corr[args.titration_type] df.y2 *= corr[args.titration_type] if not os.path.isdir(args.out): os.makedirs(args.out) df.to_csv(os.path.join(args.out, args.ffile), index=False) main()
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api/api.py
dartm05/Shape-Prediction
0
80425
import numpy as np import io from PIL import Image import tensorflow as tf from tensorflow.keras.models import load_model from tensorflow.keras.preprocessing.image import img_to_array import matplotlib.pyplot as plt from flask import Flask,render_template,redirect,url_for,request import urllib3 from tensorflow.keras.preprocessing import image import os app = Flask(__name__) model = load_model('shape2.h5') # Image preprocessing/prediction function def predict_(img_path, show=False): img = image.load_img(img_path, target_size=(224, 224)) img_tensor = image.img_to_array(img) # (height, width, channels) img_tensor = np.expand_dims(img_tensor, axis=0) # (1, height, width, channels), add a dimension because the model expects this shape: (batch_size, height, width, channels) img_tensor /= 255. # imshow expects values in the range [0, 1] prediction = model.predict(img_tensor) if show: plt.imshow(img_tensor[0]) plt.axis('off') plt.show() return prediction # Home @app.route('/', methods=['GET']) def api(): return { 'userid':1, 'title':'Flask react app', 'completed': False } @app.route('/predict',methods = ['GET' , 'POST']) def predictions(): error = '' # Change image dir to fit needs target_img = os.path.join(os.getcwd() , 'static/images') if request.method == 'POST': if (request.files): file = request.files['file'] if file: file.save(os.path.join(target_img , file.filename)) img_path = os.path.join(target_img , file.filename) img = file.filename predictions = predict_(img_path) # Change to a switch-case later if round(predictions[0][0]) == 0: pred = 'Circle' if round(predictions[0][0]) == 1: pred = 'Rectangle' if round(predictions[0][0]) == 2: pred = 'Star' if round(predictions[0][0]) == 3: pred = 'Triangle' else: pred = 'No existe XD' predictions = { 'Prediction': pred } else: error = "Please draw a shape to predict." if(len(error) == 0): # No error pass else: # Error pass else: # Method no fue POST XD pass if __name__ == '__main__': app.run(debug=True)
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API/client.py
Ray1993TW/Kn-Pressure_Test
0
100967
<reponame>Ray1993TW/Kn-Pressure_Test import requests, json, cv2 url1 = '' content_type = 'image/jpeg' headers = {'content-type': content_type} class useAPI: def __init__(self, frame): h,w,c = frame.shape if(h<=0): h=w elif(w<=0): w=h else: self._state_, self.img_encoded = cv2.imencode('.jpg', frame) def get_answer(self): try: response1 = requests.post(url1, data=self.img_encoded.tostring(), headers=headers, timeout = 3) get_json1 = json.loads(response1.text) return get_json1 except: return 'e'
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AlgorithmsAndDataStructures/mod2/Heap.py
BootyAss/bmstu
0
4734
<gh_stars>0 class Heap: def __init__(self): self.items = dict() # key - (value, index) self.indexes = [] # index - key // to know indexes # Usefull functions def swap(self, i, j): x = self.indexes[i] # key of 1 item y = self.indexes[j] # key of 2 item # swap keys in index array self.indexes[i] = y self.indexes[j] = x temp = self.items[x][1] # index of 1 item # swap indexes in dictionary self.items.update({x: (self.items[x][0], self.items[y][1])}) self.items.update({y: (self.items[y][0], temp)}) def bigger(self, i, j): if self.indexes[i] <= self.indexes[j]: return False else: return True # Check family UwU def hasParent(self, i): if (i - 1)/2 >= 0: return True return False def parentIndex(self, i): return int((i - 1)/2) def hasLeft(self, i): if i*2 + 1 < len(self.indexes): return True return False def leftIndex(self, i): return int(i*2 + 1) def hasRight(self, i): if i*2 + 2 < len(self.indexes): return True return False def rightIndex(self, i): return int(i*2 + 2) # heapifys def heapifyUp(self, i=None): if i: index = i else: index = len(self.indexes) - 1 while self.hasParent(index) and self.bigger(self.parentIndex(index), index): self.swap(self.parentIndex(index), index) index = self.parentIndex(index) def heapifyDown(self, i=0): index = i while self.hasLeft(index): smaller = self.leftIndex(index) if self.hasRight(index) and self.bigger(self.leftIndex(index), self.rightIndex(index)): smaller = self.rightIndex(index) if self.bigger(smaller, index): break else: self.swap(index, smaller) index = smaller # all needed methods def add(self, key, data): if self.items.get(key, None): raise(Exception) self.items[key] = (data, int(len(self.indexes))) self.indexes.append(key) self.heapifyUp() def set(self, key, data): temp = self.items.get(key, None) if not temp: raise(Exception) self.items[key] = (data, temp[1]) def delete(self, key): temp = self.items.get(key, None) if not temp: raise(Exception) if len(self.indexes) > 1: lastKey = self.indexes[-1] last = self.items.get(lastKey, None) # set last item index of deleted self.items.update({lastKey: (last[0], temp[1])}) # set key of last item to deleted index self.indexes[temp[1]] = lastKey self.indexes.pop() del self.items[key] if temp[1] < len(self.indexes): # dont heapify if deleted last element self.heapifyDown(i=temp[1]) self.heapifyUp(i=temp[1]) def search(self, key): temp = self.items.get(key, None) if temp: print('1', temp[1], temp[0]) else: print('0') def min(self): if len(self.indexes) == 0: raise(Exception) key = self.indexes[0] print(key, '0', self.items[key][0]) def max(self): if len(self.indexes) == 0: raise(Exception) i = int(len(self.indexes)/2) maxKey = self.indexes[i] index = i while i < len(self.indexes): if maxKey < self.indexes[i]: maxKey = self.indexes[i] index = i i += 1 print(maxKey, index, self.items[maxKey][0]) def extract(self): if len(self.indexes) == 0: raise(Exception) rootKey = self.indexes[0] rootData = self.items[rootKey][0] del self.items[rootKey] if len(self.indexes) > 1: self.indexes[0] = self.indexes.pop() # set top item index to 0 self.items.update({self.indexes[0] : (self.items[self.indexes[0]][0], 0)}) self.heapifyDown() else: self.indexes.pop() print(rootKey, rootData) def print(self): height = 0 index = 0 out = '' i = 0 if len(self.indexes) == 0: out += '_\n' print('_') return while i < len(self.indexes): lineLen = 1 << height index += 1 key = self.indexes[i] out += '[' + str(key) + ' ' + self.items[key][0] if height != 0: out += ' ' + str(self.indexes[self.parentIndex(i)]) out += ']' if index == lineLen: out += '\n' index = 0 height += 1 else: out += ' ' i += 1 if index != 0 and index < lineLen: out += '_ ' * (lineLen - index) print(out[0:-1]) else: print(out, end='') cycle = True heap = Heap() while cycle: try: line = input() cmd = line.split(' ', 2) try: if len(cmd) == 1 and cmd[0] == '': continue if len(cmd) == 2 and cmd[0] == '' and cmd[1] == '': continue if cmd[0] == 'add': heap.add(int(cmd[1]), cmd[2]) elif cmd[0] == 'set': heap.set(int(cmd[1]), cmd[2]) elif cmd[0] == 'delete': heap.delete(int(cmd[1])) elif cmd[0] == 'search': heap.search(int(cmd[1])) elif cmd[0] == 'min': heap.min() elif cmd[0] == 'max': heap.max() elif cmd[0] == 'extract': heap.extract() elif cmd[0] == 'print': heap.print() else: raise(Exception) except Exception: print('error') continue except Exception: cycle = False
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xbox/constants.py
tomwhross/wishlist
0
180733
<filename>xbox/constants.py<gh_stars>0 SEED_URLS = [ "https://www.microsoft.com/en-ca/p/immortals-fenyx-rising/c07kjzrh0l7s?activetab=pivot:overviewtab", "https://www.microsoft.com/en-ca/p/grand-theft-auto-v-premium-edition/C496CLVXMJP8?wa=wsignin1.0&lc=4105&activetab=pivot:overviewtab", "https://www.microsoft.com/en-ca/p/far-cry-5/br7x7mvbbqkm?activetab=pivot:overviewtab", "https://www.microsoft.com/en-ca/p/pathfinder-kingmaker-definitive-edition/bphqqn22gb7l?activetab=pivot:overviewtab", "https://www.microsoft.com/en-ca/p/call-of-duty-modern-warfare---digital-standard-edition/9NVQBQ3F6W9W?activetab=pivot:overviewtab", "https://www.microsoft.com/en-ca/p/ori-and-the-will-of-the-wisps/9N8CD0XZKLP4?activetab=pivot:overviewtab", "https://www.microsoft.com/EN-CA/p/red-dead-redemption-2/9N2ZDN7NWQKV?activetab=pivot:overviewtab", "https://www.microsoft.com/en-ca/p/tom-clancys-rainbow-six-siege-deluxe-edition/9p30k2nxwh82?activetab=pivot:overviewtab", "https://www.microsoft.com/en-ca/p/pillars-of-eternity-complete-edition/bs34vnw7h61f?activetab=pivot:overviewtab", "https://www.microsoft.com/en-ca/p/pillars-of-eternity-ii-deadfire-ultimate-edition/9pjd2kmx7tz6?activetab=pivot:overviewtab", "https://www.microsoft.com/en-ca/p/astroneer/9nblggh43kzb?cid=msft_web_chart&activetab=pivot:overviewtab", "https://www.microsoft.com/en-ca/p/farm-together/9mxsdjxfzq25?cid=msft_web_chart&activetab=pivot:overviewtab", "https://www.microsoft.com/en-ca/p/Mafia-III-Definitive-Edition/BVZLS7XZ68KF?rtc=1&activetab=pivot:overviewtab", "https://www.microsoft.com/EN-CA/p/little-nightmares/BWD88K55MK5W?id=Pubsalegame_Week13&activetab=pivot:overviewtab", "https://www.microsoft.com/en-ca/p/Nexomon-Extinction/9NCJR504WXT0?rtc=1&activetab=pivot:overviewtab", "https://www.microsoft.com/en-ca/p/GreedFall/BWMH4RQ4Q06F?rtc=1&activetab=pivot:overviewtab", "https://www.microsoft.com/en-ca/p/outriders-standard-edition/9p12rcxbf02p?activetab=pivot:overviewtab", ]
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370, 29922, 29886, 11002, 29901, 957, 1493, 3891, 613, 13, 29962, 13, 2 ]
core/management/commands/init_envs.py
klebed/esdc-ce
97
124107
from ._base import DanubeCloudCommand, CommandError class Command(DanubeCloudCommand): help = 'Initialize the virtual environments.' def handle(self, *args, **options): raise CommandError('Use ctl.sh directly')
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app/profiles_api/urls.py
ijhajj/Django-basicRESTAPI
0
168960
from django.conf.urls import url from django.conf.urls import include from django.urls import path from rest_framework.routers import DefaultRouter from . import views router = DefaultRouter() router.register('hello-viewset', views.HelloViewSet, base_name='hello-viewset') #In case of ModelSerializer, no need to pass the base_name router.register('profile', views.UserProfileViewSet) router.register('login', views.LoginViewSet, base_name='login') urlpatterns = [ path('hello-view/',views.HelloApiView.as_view()), path('', include(router.urls)) ]
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raiden/tests/integration/test_blockchainservice.py
nicksavers/raiden
2
79524
# -*- coding: utf-8 -*- from __future__ import division import os import pytest from ethereum import _solidity from ethereum._solidity import compile_file from ethereum.utils import denoms from pyethapp.rpc_client import JSONRPCClient from pyethapp.jsonrpc import default_gasprice from raiden.network.rpc.client import ( decode_topic, patch_send_transaction, patch_send_message ) from raiden.utils import privatekey_to_address, get_contract_path from raiden.blockchain.abi import CHANNEL_MANAGER_ABI solidity = _solidity.get_solidity() # pylint: disable=invalid-name @pytest.mark.timeout(180) @pytest.mark.parametrize('privatekey_seed', ['blockchain:{}']) @pytest.mark.parametrize('number_of_nodes', [3]) @pytest.mark.parametrize('channels_per_node', [0]) @pytest.mark.parametrize('number_of_assets', [0]) def test_new_netting_contract(raiden_network, asset_amount, settle_timeout): # pylint: disable=line-too-long,too-many-statements,too-many-locals app0, app1, app2 = raiden_network peer0_address = app0.raiden.address peer1_address = app1.raiden.address peer2_address = app2.raiden.address blockchain_service0 = app0.raiden.chain asset_address = blockchain_service0.deploy_and_register_asset( contract_name='HumanStandardToken', contract_file='HumanStandardToken.sol', constructor_parameters=(asset_amount, 'raiden', 2, 'Rd'), ) asset0 = blockchain_service0.asset(asset_address) for transfer_to in raiden_network[1:]: asset0.transfer( privatekey_to_address(transfer_to.raiden.privkey), asset_amount // len(raiden_network), ) manager0 = blockchain_service0.manager_by_asset(asset_address) # sanity assert manager0.channels_addresses() == [] assert manager0.channels_by_participant(peer0_address) == [] assert manager0.channels_by_participant(peer1_address) == [] assert manager0.channels_by_participant(peer2_address) == [] # create one channel netting_address_01 = manager0.new_netting_channel( peer0_address, peer1_address, settle_timeout, ) # check contract state netting_channel_01 = blockchain_service0.netting_channel(netting_address_01) assert netting_channel_01.isopen() is False assert netting_channel_01.partner(peer0_address) == peer1_address assert netting_channel_01.partner(peer1_address) == peer0_address # check channels channel_list = manager0.channels_addresses() assert sorted(channel_list[0]) == sorted([peer0_address, peer1_address]) assert manager0.channels_by_participant(peer0_address) == [netting_address_01] assert manager0.channels_by_participant(peer1_address) == [netting_address_01] assert manager0.channels_by_participant(peer2_address) == [] # create other chanel netting_address_02 = manager0.new_netting_channel( peer0_address, peer2_address, settle_timeout, ) netting_channel_02 = blockchain_service0.netting_channel(netting_address_02) assert netting_channel_02.isopen() is False assert netting_channel_02.partner(peer0_address) == peer2_address assert netting_channel_02.partner(peer2_address) == peer0_address channel_list = manager0.channels_addresses() expected_channels = [ sorted([peer0_address, peer1_address]), sorted([peer0_address, peer2_address]), ] for channel in channel_list: assert sorted(channel) in expected_channels result0 = sorted(manager0.channels_by_participant(peer0_address)) result1 = sorted([netting_address_01, netting_address_02]) assert result0 == result1 assert manager0.channels_by_participant(peer1_address) == [netting_address_01] assert manager0.channels_by_participant(peer2_address) == [netting_address_02] # deposit without approve should fail netting_channel_01.deposit(peer0_address, 100) assert netting_channel_01.isopen() is False assert netting_channel_02.isopen() is False assert netting_channel_01.detail(peer0_address)['our_balance'] == 0 assert netting_channel_01.detail(peer1_address)['our_balance'] == 0 # single-funded channel app0.raiden.chain.asset(asset_address).approve(netting_address_01, 100) netting_channel_01.deposit(peer0_address, 100) assert netting_channel_01.isopen() is True assert netting_channel_02.isopen() is False assert netting_channel_01.detail(peer0_address)['our_balance'] == 100 assert netting_channel_01.detail(peer1_address)['our_balance'] == 0 # double-funded channel app0.raiden.chain.asset(asset_address).approve(netting_address_02, 70) netting_channel_02.deposit(peer0_address, 70) assert netting_channel_01.isopen() is True assert netting_channel_02.isopen() is True assert netting_channel_02.detail(peer0_address)['our_balance'] == 70 assert netting_channel_02.detail(peer2_address)['our_balance'] == 0 app2.raiden.chain.asset(asset_address).approve(netting_address_02, 130) app2.raiden.chain.netting_channel(netting_address_02).deposit(peer2_address, 130) assert netting_channel_01.isopen() is True assert netting_channel_02.isopen() is True assert netting_channel_02.detail(peer0_address)['our_balance'] == 70 assert netting_channel_02.detail(peer2_address)['our_balance'] == 130 @pytest.mark.skipif( 'TRAVIS' in os.environ, reason='Flaky test due to mark.timeout not being scheduled. Issue #319' ) @pytest.mark.timeout(60) @pytest.mark.parametrize('privatekey_seed', ['blockchain:{}']) @pytest.mark.parametrize('number_of_nodes', [3]) def test_blockchain( blockchain_type, blockchain_backend, # required to start the geth backend blockchain_rpc_ports, private_keys, poll_timeout): # pylint: disable=too-many-locals # this test is for interaction with a blockchain using json-rpc, so it # doesnt make sense to execute it against mock or tester if blockchain_type not in ('geth',): return addresses = [ privatekey_to_address(priv) for priv in private_keys ] privatekey = private_keys[0] address = privatekey_to_address(privatekey) total_asset = 100 jsonrpc_client = JSONRPCClient( port=blockchain_rpc_ports[0], privkey=privatekey, print_communication=False, ) patch_send_transaction(jsonrpc_client) patch_send_message(jsonrpc_client) humantoken_path = get_contract_path('HumanStandardToken.sol') humantoken_contracts = compile_file(humantoken_path, libraries=dict()) token_proxy = jsonrpc_client.deploy_solidity_contract( address, 'HumanStandardToken', humantoken_contracts, dict(), (total_asset, 'raiden', 2, 'Rd'), contract_path=humantoken_path, gasprice=default_gasprice, timeout=poll_timeout, ) registry_path = get_contract_path('Registry.sol') registry_contracts = compile_file(registry_path) registry_proxy = jsonrpc_client.deploy_solidity_contract( address, 'Registry', registry_contracts, dict(), tuple(), contract_path=registry_path, gasprice=default_gasprice, timeout=poll_timeout, ) log_list = jsonrpc_client.call( 'eth_getLogs', { 'fromBlock': '0x0', 'toBlock': 'latest', 'topics': [], }, ) assert len(log_list) == 0 # pylint: disable=no-member assert token_proxy.balanceOf(address) == total_asset transaction_hash = registry_proxy.addAsset.transact( token_proxy.address, gasprice=denoms.wei, ) jsonrpc_client.poll(transaction_hash.decode('hex'), timeout=poll_timeout) assert len(registry_proxy.assetAddresses.call()) == 1 log_list = jsonrpc_client.call( 'eth_getLogs', { 'fromBlock': '0x0', 'toBlock': 'latest', 'topics': [], }, ) assert len(log_list) == 1 channel_manager_address_encoded = registry_proxy.channelManagerByAsset.call( token_proxy.address, ) channel_manager_address = channel_manager_address_encoded.decode('hex') log = log_list[0] log_topics = [ decode_topic(topic) for topic in log['topics'] # pylint: disable=invalid-sequence-index ] log_data = log['data'] event = registry_proxy.translator.decode_event( log_topics, log_data[2:].decode('hex'), ) assert channel_manager_address == event['channel_manager_address'].decode('hex') assert token_proxy.address == event['asset_address'].decode('hex') channel_manager_proxy = jsonrpc_client.new_contract_proxy( CHANNEL_MANAGER_ABI, channel_manager_address, ) transaction_hash = channel_manager_proxy.newChannel.transact( addresses[1], 10, gasprice=denoms.wei, ) jsonrpc_client.poll(transaction_hash.decode('hex'), timeout=poll_timeout) log_list = jsonrpc_client.call( 'eth_getLogs', { 'fromBlock': '0x0', 'toBlock': 'latest', 'topics': [], }, ) assert len(log_list) == 2
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Translator.py
aj-naik/City-Sentiment-Detector-BERT
2
197723
import requests class Translator: def __init__(self, api_key: str): self.api_key = api_key class GoogleTranslate(Translator): api_endpoint = 'https://translation.googleapis.com/language/translate/v2' def __init__(self, api_key: str): Translator.__init__(self, api_key=api_key) def detect_language(self, input_text) -> str: request = requests.post(f'{self.api_endpoint}/detect', data={'q': input_text, 'key': self.api_key}) data = request.json() language = data.get('data').get('detections')[0][0].get('language') return language def translate(self, input_text: str, target_lang: str, source_lang: str = "") -> str: request = requests.post(f'{self.api_endpoint}', data={'q': input_text, 'source': source_lang, 'target': target_lang, 'format': 'text', 'key': self.api_key}) data = request.json() translations = data.get('data').get('translations') text = translations[0].get('translatedText') return text
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run.py
OSPgrp8/OSP
0
181523
<gh_stars>0 from app import app import mongoengine as ming from osp.classes.address import Address if __name__ == "__main__": obj = Address(residence_number="a@b", street="str", locality="loc", state="state", city="city") print(obj.pincode) app.run(debug = True,port = 8000)
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district42_exp_types/sdict/_rollout.py
nikitanovosibirsk/district42-exp-types
0
1611343
<reponame>nikitanovosibirsk/district42-exp-types from typing import Any, Dict, Union from district42 import optional from district42.utils import is_ellipsis __all__ = ("rollout",) KeysType = Dict[Union[str, optional], Any] def rollout(keys: KeysType, separator: str = ".") -> KeysType: updated: KeysType = {} for comp_key, val in keys.items(): if is_ellipsis(comp_key): assert is_ellipsis(val) updated[comp_key] = val continue is_optional = False if isinstance(comp_key, optional): assert isinstance(comp_key.key, str) comp_key = comp_key.key is_optional = True assert isinstance(comp_key, str) parts = comp_key.split(separator) key = parts[0] if len(parts) == 1: updated[optional(key) if is_optional else key] = val else: if key not in updated: updated[key] = {} tail = separator.join(parts[1:]) updated[key][optional(tail) if is_optional else tail] = val for k, v in updated.items(): updated[k] = rollout(v) if isinstance(v, dict) else v return updated
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aio_geojson_nsw_transport_incidents/__init__.py
Fred-Ch/python-aio-geojson-nsw-transport-incidents-master
0
166152
"""NSW Transport Service Incidents library.""" from .feed import NswTransportServiceIncidentsFeed # noqa from .feed_manager import NswTransportServiceIncidentsFeedManager # noqa
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tests/test_soda.py
Adam-Lechnos/SocrataPython
0
110576
<reponame>Adam-Lechnos/SocrataPython from sodapy import Socrata from sodapy.constants import DEFAULT_API_PREFIX, OLD_API_PREFIX import requests import requests_mock import os.path import inspect import json PREFIX = "https://" DOMAIN = "fakedomain.com" DATASET_IDENTIFIER = "songs" APPTOKEN = "FakeAppToken" USERNAME = "fakeuser" PASSWORD = "<PASSWORD>" TEST_DATA_PATH = os.path.join(os.path.dirname(os.path.abspath(inspect.getfile( inspect.currentframe()))), "test_data") def test_client(): client = Socrata(DOMAIN, APPTOKEN) assert isinstance(client, Socrata) client.close() def test_get(): mock_adapter = {} mock_adapter["prefix"] = PREFIX adapter = requests_mock.Adapter() mock_adapter["adapter"] = adapter client = Socrata(DOMAIN, APPTOKEN, session_adapter=mock_adapter) response_data = "get_songs.txt" setup_mock(adapter, "GET", response_data, 200) response = client.get(DATASET_IDENTIFIER) assert isinstance(response, list) assert len(response) == 10 client.close() def test_get_unicode(): mock_adapter = {} mock_adapter["prefix"] = PREFIX adapter = requests_mock.Adapter() mock_adapter["adapter"] = adapter client = Socrata(DOMAIN, APPTOKEN, session_adapter=mock_adapter) response_data = "get_songs_unicode.txt" setup_mock(adapter, "GET", response_data, 200) response = client.get(DATASET_IDENTIFIER) assert isinstance(response, list) assert len(response) == 10 client.close() def test_get_metadata_and_attachments(): mock_adapter = {} mock_adapter["prefix"] = PREFIX adapter = requests_mock.Adapter() mock_adapter["adapter"] = adapter client = Socrata(DOMAIN, APPTOKEN, session_adapter=mock_adapter) response_data = "get_song_metadata.txt" setup_old_api_mock(adapter, "GET", response_data, 200) response = client.get_metadata(DATASET_IDENTIFIER) assert isinstance(response, dict) assert "newBackend" in response assert "attachments" in response["metadata"] response = client.download_attachments(DATASET_IDENTIFIER) assert isinstance(response, list) assert len(response) == 0 client.close() def test_update_metadata(): mock_adapter = {} mock_adapter["prefix"] = PREFIX adapter = requests_mock.Adapter() mock_adapter["adapter"] = adapter client = Socrata(DOMAIN, APPTOKEN, session_adapter=mock_adapter) response_data = "update_song_metadata.txt" setup_old_api_mock(adapter, "PUT", response_data, 200) data = {"category": "Education", "attributionLink": "https://testing.updates"} response = client.update_metadata(DATASET_IDENTIFIER, data) assert isinstance(response, dict) assert response.get("category") == data["category"] assert response.get("attributionLink") == data["attributionLink"] client.close() def test_upsert_exception(): mock_adapter = {} mock_adapter["prefix"] = PREFIX adapter = requests_mock.Adapter() mock_adapter["adapter"] = adapter client = Socrata(DOMAIN, APPTOKEN, session_adapter=mock_adapter) response_data = "403_response_json.txt" setup_mock(adapter, "POST", response_data, 403, reason="Forbidden") data = [{"theme": "Surfing", "artist": "Wavves", "title": "King of the Beach", "year": "2010"}] try: client.upsert(DATASET_IDENTIFIER, data) except Exception as e: assert isinstance(e, requests.exceptions.HTTPError) else: raise AssertionError("No exception raised for bad request.") def test_upsert(): mock_adapter = {} mock_adapter["prefix"] = PREFIX adapter = requests_mock.Adapter() mock_adapter["adapter"] = adapter client = Socrata(DOMAIN, APPTOKEN, username=USERNAME, password=PASSWORD, session_adapter=mock_adapter) response_data = "upsert_songs.txt" data = [{"theme": "Surfing", "artist": "Wavves", "title": "King of the Beach", "year": "2010"}] setup_mock(adapter, "POST", response_data, 200) response = client.upsert(DATASET_IDENTIFIER, data) assert isinstance(response, dict) assert response.get("Rows Created") == 1 client.close() def test_replace(): mock_adapter = {} mock_adapter["prefix"] = PREFIX adapter = requests_mock.Adapter() mock_adapter["adapter"] = adapter client = Socrata(DOMAIN, APPTOKEN, username=USERNAME, password=PASSWORD, session_adapter=mock_adapter) response_data = "replace_songs.txt" data = [ {"theme": "Surfing", "artist": "Wavves", "title": "King of the Beach", "year": "2010"}, {"theme": "History", "artist": "Best Friends Forever", "title": "<NAME>", "year": "2008"}, ] setup_mock(adapter, "PUT", response_data, 200) response = client.replace(DATASET_IDENTIFIER, data) assert isinstance(response, dict) assert response.get("Rows Created") == 2 client.close() def test_delete(): mock_adapter = {} mock_adapter["prefix"] = PREFIX adapter = requests_mock.Adapter() mock_adapter["adapter"] = adapter client = Socrata(DOMAIN, APPTOKEN, username=USERNAME, password=PASSWORD, session_adapter=mock_adapter) uri = "{0}{1}{2}/{3}.json".format(PREFIX, DOMAIN, OLD_API_PREFIX, DATASET_IDENTIFIER) adapter.register_uri("DELETE", uri, status_code=200) response = client.delete(DATASET_IDENTIFIER) assert response.status_code == 200 try: client.delete("foobar") except Exception as e: assert isinstance(e, requests_mock.exceptions.NoMockAddress) finally: client.close() def test_create(): mock_adapter = {} mock_adapter["prefix"] = PREFIX adapter = requests_mock.Adapter() mock_adapter["adapter"] = adapter client = Socrata(DOMAIN, APPTOKEN, username=USERNAME, password=PASSWORD, session_adapter=mock_adapter) response_data = "create_foobar.txt" setup_mock(adapter, "POST", response_data, 200, dataset_identifier=None) columns = [ {"fieldName": "foo", "name": "Foo", "dataTypeName": "text"}, {"fieldName": "bar", "name": "Bar", "dataTypeName": "number"} ] tags = ["foo", "bar"] response = client.create("Foo Bar", description="test dataset", columns=columns, tags=tags, row_identifier="bar") request = adapter.request_history[0] request_payload = json.loads(request.text) # can't figure out how to use .json # Test request payload for dataset_key in ["name", "description", "columns", "tags"]: assert dataset_key in request_payload for column_key in ["fieldName", "name", "dataTypeName"]: assert column_key in request_payload["columns"][0] # Test response assert isinstance(response, dict) assert len(response.get("id")) == 9 client.close() def test_set_permission(): mock_adapter = {} mock_adapter["prefix"] = PREFIX adapter = requests_mock.Adapter() mock_adapter["adapter"] = adapter client = Socrata(DOMAIN, APPTOKEN, username=USERNAME, password=PASSWORD, session_adapter=mock_adapter) response_data = "empty.txt" setup_old_api_mock(adapter, "PUT", response_data, 200) # Test response response = client.set_permission(DATASET_IDENTIFIER, "public") assert response.status_code == 200 # Test request request = adapter.request_history[0] query_string = request.url.split("?")[-1] params = query_string.split("&") assert len(params) == 2 assert "method=setPermission" in params assert "value=public.read" in params client.close() def test_publish(): mock_adapter = {} mock_adapter["prefix"] = PREFIX adapter = requests_mock.Adapter() mock_adapter["adapter"] = adapter client = Socrata(DOMAIN, APPTOKEN, username=USERNAME, password=PASSWORD, session_adapter=mock_adapter) response_data = "create_foobar.txt" setup_publish_mock(adapter, "POST", response_data, 200) response = client.publish(DATASET_IDENTIFIER) assert isinstance(response, dict) assert len(response.get("id")) == 9 client.close() def test_import_non_data_file(): mock_adapter = {} mock_adapter["prefix"] = PREFIX adapter = requests_mock.Adapter() mock_adapter["adapter"] = adapter client = Socrata(DOMAIN, APPTOKEN, username=USERNAME, password=PASSWORD, session_adapter=mock_adapter) response_data = "successblobres.txt" nondatasetfile_path = 'tests/test_data/nondatasetfile.zip' setup_import_non_data_file(adapter, "POST", response_data, 200) with open(nondatasetfile_path, 'rb') as f: files = ( {'file': ("nondatasetfile.zip", f)} ) response = client.create_non_data_file({}, files) assert isinstance(response, dict) assert response.get("blobFileSize") == 496 client.close() def test_replace_non_data_file(): mock_adapter = {} mock_adapter["prefix"] = PREFIX adapter = requests_mock.Adapter() mock_adapter["adapter"] = adapter client = Socrata(DOMAIN, APPTOKEN, username=USERNAME, password=PASSWORD, session_adapter=mock_adapter) response_data = "successblobres.txt" nondatasetfile_path = 'tests/test_data/nondatasetfile.zip' setup_replace_non_data_file(adapter, "POST", response_data, 200) with open(nondatasetfile_path, 'rb') as fin: file = ( {'file': ("nondatasetfile.zip", fin)} ) response = client.replace_non_data_file(DATASET_IDENTIFIER, {}, file) assert isinstance(response, dict) assert response.get("blobFileSize") == 496 client.close() def setup_publish_mock(adapter, method, response, response_code, reason="OK", dataset_identifier=DATASET_IDENTIFIER, content_type="json"): path = os.path.join(TEST_DATA_PATH, response) with open(path, "r") as response_body: body = json.load(response_body) uri = "{0}{1}{2}/{3}/publication.{4}".format(PREFIX, DOMAIN, OLD_API_PREFIX, dataset_identifier, content_type) headers = { "content-type": "application/json; charset=utf-8" } adapter.register_uri(method, uri, status_code=response_code, json=body, reason=reason, headers=headers) def setup_import_non_data_file(adapter, method, response, response_code, reason="OK", dataset_identifier=DATASET_IDENTIFIER, content_type="json"): path = os.path.join(TEST_DATA_PATH, response) with open(path, "r") as response_body: body = json.load(response_body) uri = "{0}{1}/api/imports2/?method=blob".format(PREFIX, DOMAIN) headers = { "content-type": "application/json; charset=utf-8" } adapter.register_uri(method, uri, status_code=response_code, json=body, reason=reason, headers=headers) def setup_replace_non_data_file(adapter, method, response, response_code, reason="OK", dataset_identifier=DATASET_IDENTIFIER, content_type="json"): path = os.path.join(TEST_DATA_PATH, response) with open(path, "r") as response_body: body = json.load(response_body) uri = "{0}{1}{2}/{3}.{4}?method=replaceBlob&id={3}".format(PREFIX, DOMAIN, OLD_API_PREFIX, dataset_identifier, "txt") headers = { "content-type": "text/plain; charset=utf-8" } adapter.register_uri(method, uri, status_code=response_code, json=body, reason=reason, headers=headers) def setup_old_api_mock(adapter, method, response, response_code, reason="OK", dataset_identifier=DATASET_IDENTIFIER, content_type="json"): path = os.path.join(TEST_DATA_PATH, response) with open(path, "r") as response_body: try: body = json.load(response_body) except ValueError: body = None uri = "{0}{1}{2}/{3}.{4}".format(PREFIX, DOMAIN, OLD_API_PREFIX, dataset_identifier, content_type) headers = { "content-type": "application/json; charset=utf-8" } adapter.register_uri(method, uri, status_code=response_code, json=body, reason=reason, headers=headers) def setup_mock(adapter, method, response, response_code, reason="OK", dataset_identifier=DATASET_IDENTIFIER, content_type="json"): path = os.path.join(TEST_DATA_PATH, response) with open(path, "r") as response_body: body = json.load(response_body) if dataset_identifier is None: # for create endpoint uri = "{0}{1}{2}.{3}".format(PREFIX, DOMAIN, OLD_API_PREFIX, "json") else: # most cases uri = "{0}{1}{2}{3}.{4}".format(PREFIX, DOMAIN, DEFAULT_API_PREFIX, dataset_identifier, content_type) headers = { "content-type": "application/json; charset=utf-8" } adapter.register_uri(method, uri, status_code=response_code, json=body, reason=reason, headers=headers)
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src/vmshepherd/healthcheck/dummy_healthcheck.py
DreamLab/VmShepherd
10
137372
from .abstract import AbstractHealthcheck class DummyHealthcheck(AbstractHealthcheck): status = True def __init__(self, config=None): pass async def is_healthy(self, vm): return self.status def set_status(self, healthy): self.status = healthy
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darkweb/views/main.py
robopt/Capstone
5
191120
""" main.py Handles all accessible URI's for flask """ from flask import Flask, render_template, request, g from darkweb.modules.base.crawlerconfig import CrawlerConfig from darkweb.modules.irc.irc import IRC from darkweb.modules.web.WebCrawler import WebCrawler from darkweb.modules.parser.search import search from darkweb.modules.parser.parser import parser import SocketServer import threading import datetime import sys from threading import Thread from darkweb import app """ before_first Initialize parser before first request is served. """ @app.before_first_request def before_first(): print("views.py - init start") HOST, PORT = "0.0.0.0", 4443 sserver = SocketServer.ThreadingTCPServer((HOST, PORT), parser) Thread(target=sserver.serve_forever).start() print("views.py - init end") """ addParam Add a search term or a regular expression to the parser. Future work: This code causes parser and website to be on same box. Refactor to utilize connections to send terms to the parser. """ @app.route("/addParam", methods=["POST"]) def addParam(): # add new param if request.form['addST']: print("Adding searchterm") st_terms = request.form['addST'].split(",") # add new search term for st in st_terms: search().add_searchterm(st) if request.form['addRE']: re_terms = request.form['addRE'].split(",") # add new regex for re in re_terms: search().add_searchterm(re) print("Adding regularexpression") result = readSearchFile() msg = "Successfull added search parameters" return render_template("index.html", result=result) """ clearParams Remove all search terms from the parser. Future work: This code causes parser and website to be on same box. Refactor to utilize connections to send terms to the parser. """ @app.route("/clearParams", methods=["POST"]) def clearParams(): # clear all params result = readSearchFile() msg = "Successfull cleared search parameters" return render_template("index.html", result=result) """ home (get) Serve index page. """ @app.route("/", methods=["GET"]) def home(): result = readSearchFile() return render_template("index.html", result=result) """ home (post) Process a search """ @app.route("/", methods=["POST"]) def createCrawlerConfig(): print(str(request.form)) print("Post recieved.") searchName = str(request.form['searchName']) protocol = str(request.form['protocol']).lower() print("Post parameters parsed.") speed = str(request.form['speed']) maxDepth = str(request.form['maxDepth']) location = request.form['location'] options_input = str(request.form['options']) options = makeOptionsDict(options_input) config = CrawlerConfig(location, protocol, speed, maxDepth, searchName, options) msg = "Search \"" + searchName + "\" started." crawler = None search_params = None if searchName == "": msg = "Search failed. Search must be given a name." elif location == "": msg = "Search failed. Must give a search location." elif protocol == "irc": crawler = IRC(config) elif protocol == "tor" or protocol == "web": if not speed.isdigit(): msg = "Search falied. Speed much be an integer." elif not maxDepth.isdigit(): msg = "Search failed. Max Crawl Depth must be an integer." crawler = WebCrawler(config) else: msg = "Search failed invalid protocol.\nMust be TOR, IRC, or web" if(crawler): run_crawl(crawler) search_params = [("Search Name", searchName), ("Protocol", protocol), ("Speed", speed), ("Max Depth", maxDepth), ("Location", location)] for label, val in options.iteritems(): search_params.append((label, val)) result = readSearchFile() return render_template("index.html", msg=msg, search_params=search_params, result=result) """ readSearchFile read from /tmp/searches.txt and return list of 5 lines """ def readSearchFile(): result = [] i = 0 with open("/tmp/searches.txt", "r") as f: for line in f: if(i >= 5): break result.append(line) i += 1 return result """ writeSearchFile Writes to file in /tmp the datetime a search was started """ def writeSearchFile(searchName): with open("/tmp/searches.txt", "a") as f: out_string = "\"" + searchName + "\": " + datetime.datetime.now().strftime('%Y-%m-%d %H:%M:%S') + "\n" f.write(out_string) return """ run_crawl Run the specified cralwer Call do crawl in new thread """ def run_crawl(crawler, args=None): #t = threading.Thread(target=crawler.doCrawl, args=(args, )) t = threading.Thread(target=crawler.doCrawl) t.start() writeSearchFile(crawler.config.name) return """ makeOptionsDict format options string from form and create options dict for crawlerconfig returns options dict """ def makeOptionsDict(options_input): options = {} split_input = options_input.split(',') for s in split_input: s = s.replace(" ", "") o = s.split(':') if len(o) == 2: options[o[0]] = o[1] return options
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scripts/list_ports.py
nnarain/ftl
0
182395
import os import serial def get_serial_port_iterator(): try: if os.name == 'nt': from serial.tools.list_ports_windows import comports return comports elif os.name == 'posix': from serial.tools.list_ports_posix import comports return comports else: raise ImportError('No serial implementation for this platform found') except ImportError as e: return None for (port, _, _) in get_serial_port_iterator()(): print(port)
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testproject/settings.py
Instawork/django-log-request-id
1
84421
<filename>testproject/settings.py from django.conf import global_settings DATABASES = { 'default': { 'ENGINE': 'django.db.backends.sqlite3', 'NAME': ':memory:', }, } DEBUG = True SECRET_KEY = 'secret' ROOT_URLCONF = "testproject.urls" INSTALLED_APPS = ["log_request_id"] MIDDLEWARE_CLASSES = [ 'log_request_id.middleware.RequestIDMiddleware', # ... other middleware goes here ] + list(global_settings.MIDDLEWARE_CLASSES) LOGGING = { 'version': 1, 'disable_existing_loggers': False, 'filters': { 'request_id': { '()': 'log_request_id.filters.RequestIDFilter' } }, 'formatters': { 'standard': { 'format': '%(levelname)-8s [%(asctime)s] [%(request_id)s] %(name)s: %(message)s' }, }, 'handlers': { 'mock': { 'level': 'DEBUG', 'class': 'testproject.handler.MockLoggingHandler', 'filters': ['request_id'], 'formatter': 'standard', }, }, 'loggers': { 'testproject': { 'handlers': ['mock'], 'level': 'DEBUG', 'propagate': False, }, 'log_request_id.middleware': { 'handlers': ['mock'], 'level': 'DEBUG', 'propagate': False, }, } }
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Findclone/aiofindclone.py
vypivshiy/Findclone_api
5
13538
from aiohttp import ClientSession, FormData from Findclone import __version__ from .models import Account, Profiles, Histories, get_builder from .utils import random_string, paint_boxes from .exceptions import a_error_handler, FindcloneError from io import BufferedReader, BytesIO class FindcloneAsync: """async findclone api class Attributes: headers : dict - set requests headers """ def __init__(self): self._session = ClientSession() self.headers = {"User-Agent": f"findclone-api/{__version__}"} self.__builder = get_builder().build_aio_response self._session_key = None self._userid = None self.__info = None async def login(self, login: [str, None] = None, password: [str, None] = None, session_key: [str, None] = None, userid: [str, int, None] = None) -> bool: """ *coro Findclone authorisation :param login: account login :param password: account password :param session_key: account session_key :param userid: account userid :return: True is auth success """ if login and password: async with self._session.post("https://findclone.ru/login", data={"phone": login, "password": password}) as response: await a_error_handler(response) resp = await response.json() self.__info = await self.__builder(response) self._session_key = resp["session_key"] self._userid = resp["userid"] self.headers.update({'session-key': self._session_key, 'user-id': str(self._userid)}) return True elif session_key and userid: self.headers.update({"session-key": session_key, "user-id": str(userid)}) async with self._session.get("https://findclone.ru/profile", headers=self.headers) as response: await a_error_handler(response) self.__info = await self.__builder(response) self._session_key = session_key self._userid = userid return True else: raise FindcloneError("Need login and password or session-key and _userid") @property async def info(self) -> Account: """ *coro return account information :return: Account object """ async with self._session.get("https://findclone.ru/profile", headers=self.headers) as response: info = await self.__builder(response) self.__info = info return info async def upload(self, file: [str, BufferedReader], face_box_id: int = None, timeout: float = 180) -> [Profiles, BytesIO]: """ *coro upload image or image url and return Profiles object or BytesIO object :param file: image direct download link or path :param face_box_id: OPTIONAL, send facebox id if 2 or more faces are detected :param timeout: OPTIONAL - max timeout delay :return: Profiles object or BytesIO if 2 or more faces are detected """ data = FormData() if file.startswith("http"): async with self._session.get(file, headers=self.headers) as response: file = await response.read() data.add_field("uploaded_photo", file, filename=f"{random_string()}.png", content_type="image/png") else: data.add_field("uploaded_photo", open(file, "rb"), filename=f"{random_string()}.png", content_type="image/png") async with self._session.post("https://findclone.ru/upload2", data=data, headers=self.headers, timeout=timeout) as response: resp = await response.json() if resp.get("faceBoxes"): if face_box_id is not None: async with self._session.get("https://findclone.ru/upload3", params={"id": face_box_id}, headers=self.headers) as response2: resp = await self.__builder(response2) return resp else: img_bytes = paint_boxes(file, resp) # return bytesIO object return img_bytes resp = await self.__builder(response) return resp async def history(self, offset: int = 0, count: int = 100) -> Histories: """ *coro return object histories search for account :param offset: int :param count: int :return: Histories object """ async with self._session.get("https://findclone.ru/hist", params={"offset": offset, "count": count}, headers=self.headers) as response: history = await self.__builder(response) return history async def search(self, search_id: [int, str], count: int = 128) -> Profiles: """ *coro :param search_id: [int, str] search id :param count: [int] max Profiles count get :return: Profiles object """ async with self._session.get("https://findclone.ru/search", params={"id": search_id, "count": count}, headers=self.headers) as response: search_result = await self.__builder(response) return search_result @property def get_session(self) -> dict: """ property return session-key and _userid account :return: dict {"session-key": session_key, "user-id": userid} """ _session = {"session-key": self._session_key, "user-id": self._userid} return _session def __str__(self): return self.__info.__str__() async def __aenter__(self) -> 'FindcloneAsync': return self async def __aexit__(self, exc_type, exc_val, exc_tb) -> None: await self._session.close() async def close(self) -> None: await self._session.close()
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pwtools/test/test_is_seq.py
elcorto/pwtools
41
60794
import os import numpy as np from pwtools.common import is_seq, file_write from .testenv import testdir def test_is_seq(): fn = os.path.join(testdir, 'is_seq_test_file') file_write(fn, 'lala') fd = open(fn , 'r') for xx in ([1,2,3], (1,2,3), np.array([1,2,3])): print(type(xx)) assert is_seq(xx) is True for xx in ('aaa', fd): print(type(xx)) assert is_seq(xx) is False fd.close()
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py-question/lv1-01.py
fos777/MarbleChocolate
0
88329
# Q:编写一个程序,它将找到所有这些数字,可被7整除,但不是5的倍数,2000年至3200年(包括在内)。得到的数字应按逗号分隔的顺序打印在一行上。 # HINT:考虑使用range(#begin, #end)方法 l = [] for i in range(2000,3201): if (i%7==0) and (i%5!=0): l.append(str(i)) print (l)
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output/models/nist_data/atomic/unsigned_byte/schema_instance/nistschema_sv_iv_atomic_unsigned_byte_pattern_1_xsd/__init__.py
tefra/xsdata-w3c-tests
1
69558
<gh_stars>1-10 from output.models.nist_data.atomic.unsigned_byte.schema_instance.nistschema_sv_iv_atomic_unsigned_byte_pattern_1_xsd.nistschema_sv_iv_atomic_unsigned_byte_pattern_1 import NistschemaSvIvAtomicUnsignedBytePattern1 __all__ = [ "NistschemaSvIvAtomicUnsignedBytePattern1", ]
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Programmers/10. Graph/02. Rank.py
Minoolian/Coding_Test
0
83719
# 순위 # # https://programmers.co.kr/learn/courses/30/lessons/49191 def solution(n, results): answer=0 adj=[[0 for _ in range(n+1)] for _ in range(n+1)] for w,l in results: adj[w][l]=2 adj[l][w]=1 # for i in range(n+1): # for j in range(n+1): # if adj[i][j]==1: # for k in range(n+1): # if adj[i][k]==2: # adj[j][k]=2 # elif adj[i][j]==2: # for k in range(n+1): # if adj[i][k]==1: # adj[j][k]=1 for i in range(n+1): for j in range(n+1): for k in range(n+1): if adj[i][j]==1 and adj[i][k]==2: adj[j][k]=2 elif adj[i][j]==2 and adj[i][k]==1: adj[j][k]=1 for lis in adj: if lis.count(0)==2: answer+=1 return answer solution(5,[[4, 3], [4, 2], [3, 2], [1, 2], [2, 5]])
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mkdocs_swagger_ui_plugin/plugin.py
byrnereese/mkdocs-swagger-ui
3
1611666
<gh_stars>1-10 import os import sys import fnmatch from timeit import default_timer as timer from datetime import datetime, timedelta from mkdocs import utils as mkdocs_utils from mkdocs.config import config_options, Config from mkdocs.plugins import BasePlugin import mkdocs.structure.files import yaml import json import markdown from jinja2 import Environment, FileSystemLoader, select_autoescape, Markup import requests from urllib.parse import urlparse from urllib.request import Request, urlopen from urllib.error import URLError class SwaggerUIPlugin(BasePlugin): config_scheme = ( ('do_nothing', mkdocs.config.config_options.Type(str, default='')), ('spec_url', config_options.Type(str, default='https://petstore.swagger.io/v2/swagger.json')), ('template', config_options.Type(str, default='swagger.md.tmpl')), ('outfile', config_options.Type(str, default='docs/swagger.md')) ) def __init__(self): self.enabled = True self.total_time = 0 def generate_page_contents(self): spec_url = self.config['spec_url'] tmpl_url = self.config['template'] print("INFO - Generating swagger-ui for spec: " + spec_url) print("DEBUG - template: " + tmpl_url) env = Environment( loader=FileSystemLoader('tmpl'), autoescape=select_autoescape(['html', 'xml']) ) md = markdown.Markdown() env.filters['markdown'] = lambda text: Markup(md.convert(text)) template = env.get_template( tmpl_url ) tmpl_out = template.render( spec=spec_url ) return tmpl_out def on_config(self, config): print("INFO - swagger-ui plugin ENABLED") def on_page_read_source(self, page, config): index_path = os.path.join(config['docs_dir'], self.config['outfile']) page_path = os.path.join(config['docs_dir'], page.file.src_path) if index_path == page_path: contents = self.generate_page_contents() return contents ''' def on_pre_build(self, config): outfile = self.config['outfile'] contents = self.generate_page_contents() dest = os.path.join(config['docs_dir'], outfile) with open(dest, "w") as fh: fh.write(contents) return config '''
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ahc_tools/test/test_utils.py
rdo-management/ahc-tools
0
183597
# Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or # implied. # See the License for the specific language governing permissions and # limitations under the License. import json import mock from ironicclient.exc import AmbiguousAuthSystem from ahc_tools.test import base from ahc_tools import utils class TestGetFacts(base.BaseTest): @mock.patch.object(utils.swift, 'SwiftAPI', autospec=True) def test_facts(self, swift_mock): swift_conn = swift_mock.return_value obj = json.dumps([[u'cpu', u'logical_0', u'bogomips', u'4199.99'], [u'cpu', u'logical_0', u'cache_size', u'4096KB']]) swift_conn.get_object.return_value = obj name = 'extra_hardware-UUID1' node = mock.Mock(extra={'hardware_swift_object': name}) expected = [(u'cpu', u'logical_0', u'bogomips', u'4199.99'), (u'cpu', u'logical_0', u'cache_size', u'4096KB')] facts = utils.get_facts(node) self.assertEqual(expected, facts) swift_conn.get_object.assert_called_once_with(name) def test_no_facts(self): node = mock.Mock(extra={}) err_msg = ("You must run introspection on the nodes before " "running this tool.\n") self.assertRaisesRegexp(SystemExit, err_msg, utils.get_facts, node) @mock.patch.object(utils.client, 'get_client', autospec=True, side_effect=AmbiguousAuthSystem) class TestGetIronicClient(base.BaseTest): def test_no_credentials(self, ic_mock): utils.CONF.config_file = ['ahc-tools.conf'] err_msg = '.*credentials.*missing.*ironic.*searched.*ahc-tools.conf' self.assertRaisesRegexp(SystemExit, err_msg, utils.get_ironic_client) self.assertTrue(ic_mock.called) class TestGetIronicNodes(base.BaseTest): def test_only_matchable_nodes_returned(self): available_node = mock.Mock(provision_state='available') manageable_node = mock.Mock(provision_state='manageable') active_node = mock.Mock(provision_state='active') ironic_client = mock.Mock() ironic_client.node.list.return_value = [available_node, manageable_node, active_node] expected = [available_node, manageable_node] returned_nodes = utils.get_ironic_nodes(ironic_client) self.assertEqual(expected, returned_nodes)
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plot/Spectrogram.py
varunss123/WaveCLI
0
179398
<gh_stars>0 #!/usr/bin/env python3 # ============================================================================= # Developer : <NAME>(<EMAIL>) # License : MIT License # Year : 2019 # ============================================================================= # ============================================================================= # Description: # Plot Spectrogram of a .wav file # ============================================================================= import argparse import matplotlib.pyplot as plot import Utilities as util import numpy as np from scipy import signal parser = argparse.ArgumentParser(description = 'Plot Spectrogram of a .wav File') parser.add_argument('-i', nargs = '?', required = True, type = str, help = 'Input File (.wav)') parser.add_argument('-o', nargs = '?', type = str, help = 'Output Image File (Optional)') parser.add_argument('-isolate',default = False, action = 'store_true', help = 'Plot Only Spectrogram without .wav') args = parser.parse_args() [fs,y_axis] = util.WavRead(args.i) x_axis = np.arange(0,len(y_axis)/fs,1/fs) f, t, spectrogram = signal.spectrogram(y_axis,fs, window = signal.get_window('hamming',1024), noverlap = 100) if not args.isolate: plot.subplot(211) plot.plot(x_axis,y_axis) plot.grid() plot.title(args.i.split('/')[-1]+ ' Signal') plot.xlabel('Time (s)') plot.ylabel('Amplitude') plot.subplot(212) plot.pcolormesh(t, f, spectrogram, cmap = 'tab20') plot.ylabel('Frequency (Hz)') plot.yscale('symlog') plot.xlabel('Time (s)') plot.grid() plot.title(args.i.split('/')[-1]+ ' Spectrogram') plot.tight_layout() if args.o: plot.savefig(args.o, dpi = 360) else: plot.show()
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home/migrations/0013_merge_20190507_1221.py
nurpeiis/RED
0
102223
<reponame>nurpeiis/RED # Generated by Django 2.1.3 on 2019-05-07 08:21 from django.db import migrations class Migration(migrations.Migration): dependencies = [ ('home', '0008_auto_20190421_1129'), ('home', '0012_team_title'), ] operations = [ ]
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backend/app/rooms/models.py
vpaliy/react-chat
1
93228
# -*- coding: future_fstrings -*- from app.database import Model, Column, SurrogatePK, db, relationship import datetime as dt import hashlib class Room(SurrogatePK, Model): __tablename__ = 'rooms' name = Column(db.String(80), unique=True, nullable=False) description = Column(db.String(300), unique=True, nullable=False) image = Column(db.String(120), nullable=True) created_at = Column(db.DateTime, nullable=False, default=dt.datetime.utcnow) updated_at = Column(db.DateTime, nullable=False, default=dt.datetime.utcnow) @property def avatar_url(self): hash = hashlib.md5(self.name.lower()).hexdigest() return f'https://www.gravatar.com/avatar/{hash}?d=identicon&s={str(50)}' def __repr__(self): return '<Room {!r}>'.format(self.name)
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pkgpanda/actions.py
zhe-sun/dcos
0
84781
<reponame>zhe-sun/dcos<filename>pkgpanda/actions.py import collections import logging import os import sys from functools import partial from subprocess import CalledProcessError, check_call from pkgpanda import PackageId, requests_fetcher from pkgpanda.constants import (DCOS_SERVICE_CONFIGURATION_PATH, SYSCTL_SETTING_KEY) from pkgpanda.exceptions import FetchError, PackageConflict, ValidationError from pkgpanda.util import (extract_tarball, if_exists, load_json, load_string, write_string) DCOS_TARGET_CONTENTS = """[Install] WantedBy=multi-user.target """ log = logging.getLogger(__name__) def activate_packages(install, repository, package_ids, systemd, block_systemd): """Replace the active package set with package_ids. install: pkgpanda.Install repository: pkgpanda.Repository package_ids: sequence of package IDs to activate systemd: start/stop systemd services block_systemd: if systemd, block waiting for systemd services to come up """ assert isinstance(package_ids, collections.Sequence) install.activate(repository.load_packages(package_ids)) if systemd: _start_dcos_target(block_systemd) def swap_active_package(install, repository, package_id, systemd, block_systemd): """Replace an active package with a package_id with the same name. swap(install, repository, 'foo--version') will replace the active 'foo' package with 'foo--version'. install: pkgpanda.Install repository: pkgpanda.Repository package_id: package ID to activate systemd: start/stop systemd services block_systemd: if systemd, block waiting for systemd services to come up """ active = install.get_active() # TODO(cmaloney): I guarantee there is a better way to write this and # I've written the same logic before... packages_by_name = dict() for id_str in active: pkg_id = PackageId(id_str) packages_by_name[pkg_id.name] = pkg_id new_id = PackageId(package_id) if new_id.name not in packages_by_name: raise ValidationError("No package with name {} currently active to swap with.".format(new_id.name)) packages_by_name[new_id.name] = new_id new_active = list(map(str, packages_by_name.values())) # Activate with the new package name activate_packages(install, repository, new_active, systemd, block_systemd) def fetch_package(repository, repository_url, package_id, work_dir): """Fetch package_id from repository_url into repository. repository: pkgpanda.Repository repository_url: URL for remote package repository package_id: package ID to fetch work_dir: location for temporary files, used only if repository_url is a file URL with a relative path """ def fetcher(id_, target): return requests_fetcher(repository_url, id_, target, work_dir) # TODO(cmaloney): Make this not use escape sequences when not at a # `real` terminal. sys.stdout.write("\rFetching: {0}".format(package_id)) sys.stdout.flush() try: repository.add(fetcher, package_id) except FetchError as ex: raise Exception("Unable to fetch package {0}: {1}".format(package_id, ex)) from ex else: sys.stdout.write("\rFetched: {0}".format(package_id)) finally: sys.stdout.write("\n") sys.stdout.flush() def add_package_file(repository, package_filename): """Add a package to the repository from a file. repository: pkgpanda.Repository package_filename: location of the package file """ filename_suffix = '.tar.xz' # Extract Package Id (Filename must be path/{pkg-id}.tar.xz). name = os.path.basename(package_filename) if not name.endswith(filename_suffix): print("ERROR: Can only add package tarballs which have names " "like {{pkg-id}}{}".format(filename_suffix)) pkg_id = name[:-len(filename_suffix)] # Validate the package id PackageId(pkg_id) def fetch(_, target): extract_tarball(package_filename, target) repository.add(fetch, pkg_id) def remove_package(install, repository, package_id): """Remove a package from the local repository. 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If not exists, download everything # and install /etc/systemd/system/mutli-user.target/dcos.target bootstrap_path = os.path.join(install.root, "bootstrap") if os.path.exists(bootstrap_path): # Write, enable /etc/systemd/system/dcos.target for next boot. dcos_target_dir = os.path.dirname(install.systemd_dir) try: os.makedirs(dcos_target_dir) except FileExistsError: pass write_string(os.path.join(dcos_target_dir, "dcos.target"), DCOS_TARGET_CONTENTS) _do_bootstrap(install, repository) # Enable dcos.target only after we have populated it to prevent starting # up stuff inside of it before we activate the new set of packages. if install.manage_systemd: _start_dcos_target(block_systemd=True) os.remove(bootstrap_path) # Check for /opt/mesosphere/install_progress. If found, recover the partial # update. if os.path.exists("/opt/mesosphere/install_progress"): took_action, msg = install.recover_swap_active() if not took_action: print("No recovery performed: {}".format(msg)) def _start_dcos_target(block_systemd): no_block = [] if block_systemd else ["--no-block"] check_call(["systemctl", "daemon-reload"]) check_call(["systemctl", "enable", "dcos.target", '--no-reload']) check_call(["systemctl", "start", "dcos.target"] + no_block) def _do_bootstrap(install, repository): # These files should be set by the environment which initially builds # the host (cloud-init). repository_url = if_exists(load_string, install.get_config_filename("setup-flags/repository-url")) # TODO(cmaloney): If there is 1+ master, grab the active config from a master. # If the config can't be grabbed from any of them, fail. def fetcher(id, target): if repository_url is None: raise ValidationError("ERROR: Non-local package {} but no repository url given.".format(repository_url)) return requests_fetcher(repository_url, id, target, os.getcwd()) # Copy host/cluster-specific packages written to the filesystem manually # from the setup-packages folder into the repository. Do not overwrite or # merge existing packages, hard fail instead. setup_packages_to_activate = [] setup_pkg_dir = install.get_config_filename("setup-packages") copy_fetcher = partial(_copy_fetcher, setup_pkg_dir) if os.path.exists(setup_pkg_dir): for pkg_id_str in os.listdir(setup_pkg_dir): print("Installing setup package: {}".format(pkg_id_str)) if not PackageId.is_id(pkg_id_str): raise ValidationError("Invalid package id in setup package: {}".format(pkg_id_str)) pkg_id = PackageId(pkg_id_str) if pkg_id.version != "setup": raise ValidationError( "Setup packages (those in `{0}`) must have the version setup. " "Bad package: {1}".format(setup_pkg_dir, pkg_id_str)) # Make sure there is no existing package if repository.has_package(pkg_id_str): print("WARNING: Ignoring already installed package {}".format(pkg_id_str)) repository.add(copy_fetcher, pkg_id_str) setup_packages_to_activate.append(pkg_id_str) # If active.json is set on the host, use that as the set of packages to # activate. Otherwise just use the set of currently active packages (those # active in the bootstrap tarball) to_activate = None active_path = install.get_config_filename("setup-flags/active.json") if os.path.exists(active_path): print("Loaded active packages from", active_path) to_activate = load_json(active_path) # Ensure all packages are local print("Ensuring all packages in active set {} are local".format(",".join(to_activate))) for package in to_activate: repository.add(fetcher, package) else: print("Calculated active packages from bootstrap tarball") to_activate = list(install.get_active()) # Fetch and activate all requested additional packages to accompany the bootstrap packages. cluster_packages_filename = install.get_config_filename("setup-flags/cluster-packages.json") cluster_packages = if_exists(load_json, cluster_packages_filename) print("Checking for cluster packages in:", cluster_packages_filename) if cluster_packages: if not isinstance(cluster_packages, list): print('ERROR: {} should contain a JSON list of packages. Got a {}'.format(cluster_packages_filename, type(cluster_packages))) print("Loading cluster-packages: {}".format(cluster_packages)) for package_id_str in cluster_packages: # Validate the package ids pkg_id = PackageId(package_id_str) # Fetch the packages if not local if not repository.has_package(package_id_str): repository.add(fetcher, package_id_str) # Add the package to the set to activate setup_packages_to_activate.append(package_id_str) else: print("No cluster-packages specified") # Calculate the full set of final packages (Explicit activations + setup packages). # De-duplicate using a set. to_activate = list(set(to_activate + setup_packages_to_activate)) print("Activating packages") install.activate(repository.load_packages(to_activate)) def _copy_fetcher(setup_pkg_dir, id_, target): src_pkg_path = os.path.join(setup_pkg_dir, id_) + "/" check_call(["cp", "-rp", src_pkg_path, target]) def _apply_sysctl(setting, service): try: check_call(["sysctl", "-q", "-w", setting]) except CalledProcessError: log.warning("sysctl {setting} not set for {service}".format(setting=setting, service=service)) def _apply_sysctl_settings(sysctl_settings, service): for setting, value in sysctl_settings.get(service, {}).items(): _apply_sysctl("{setting}={value}".format(setting=setting, value=value), service) def apply_service_configuration(service): if not os.path.exists(DCOS_SERVICE_CONFIGURATION_PATH): return dcos_service_properties = load_json(DCOS_SERVICE_CONFIGURATION_PATH) if SYSCTL_SETTING_KEY in dcos_service_properties: _apply_sysctl_settings(dcos_service_properties[SYSCTL_SETTING_KEY], service)
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hivemind/client/__init__.py
Vsevolod-pl/hivemind
11
123088
from hivemind.client.expert import RemoteExpert from hivemind.client.moe import RemoteMixtureOfExperts from hivemind.client.switch_moe import RemoteSwitchMixtureOfExperts from hivemind.client.averaging import DecentralizedAverager from hivemind.client.averaging.training import TrainingAverager
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algorithms/acm/sort.py
MarkWh1te/Gate-of-Babylon
2
185870
"""Sorting Algorithms In Python """ """ Dutch national flag problem https://en.wikipedia.org/wiki/Dutch_national_flag_problem """ def sort_colors(nums: [int], pivot: int)->[int]: small = 0 current = 1 big = len(nums)-1 while current < big: if nums[current] == pivot: current += 1 elif nums[current] > pivot: nums[big], nums[current] = nums[current], nums[big] big -= 1 else: nums[current], nums[small] = nums[small], nums[current] small += 1 current += 1 return nums def quick_sort(numbers: list): if len(numbers) <= 1: return numbers pivot = numbers[0] left = [i for i in numbers[1:] if i <= pivot] right = [i for i in numbers[1:] if i > pivot] return quick_sort(left) + [pivot] + quick_sort(right)
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pypospack/potential/threebody.py
eragasa/pypospack
4
99153
<reponame>eragasa/pypospack<filename>pypospack/potential/threebody.py from collections import OrderedDict from pypospack.potential import Potential class ThreeBodyPotential(Potential): def _init_parameter_names(self): # TODO: This is only written for a single element potential for i in range(len(self.symbols)): for j in range(len(self.symbols)): for k in range(len(self.symbols)): el1 = self.symbols[i] el2 = self.symbols[j] el3 = self.symbols[k] self._add_parameter_names(el1, el2, el3) def _add_parameter_names(self,el1,el2,el3): s = "{}{}{}".format(el1,el2,el3) self.parameter_names = [] for p in self.threebody_parameter_names: self.parameter_names.append('{}__{}'.format(s,p)) def _init_parameters(self): self.parameters = OrderedDict() for p in self.parameter_names: self.parameters[p] = None
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tests/unit/test_placeholder.py
djpugh/docserver-client
1
167803
<filename>tests/unit/test_placeholder.py<gh_stars>1-10 import unittest class PlaceholderTestCase(unittest.TestCase): def test_x(self): self.assertEqual(1, 1)
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OPTICS2.py
k-kapp/Clustering-Algos
0
27363
# -*- coding: utf-8 -*- """ Created on Mon Nov 30 21:25:24 2015 @author: Konrad """ import copy import numpy as np import matplotlib.pyplot as plt import scipy.special as sc_p def gen_clusters(means, num_each): tup = (); for m in means: tup = tup + (np.random.multivariate_normal(m, np.diag(np.ones(2)), num_each),) data = np.concatenate(tup); np.random.shuffle(data); return data; def make_pts(data): pts = []; for pos in data: pts.append(Point(pos)); return pts; def euclid(obj1, obj2): if (isinstance(obj1, Point) and isinstance(obj2, Point)): return np.sqrt(sum(( obj1.pos - obj2.pos )**2)); elif (isinstance(obj1, np.ndarray) and isinstance(obj2, np.ndarray)): return np.sqrt(sum(( obj1 - obj2 )**2)) else: return None; class Point: def __init__(self, pos): self.pos = copy.deepcopy(pos); self.processed = False; self.core_dist = None; self.reach_dist = None; self.in_seed = False; class OPTICS: def __init__(self, min_pts, data, max_eps = None): self.max_eps = max_eps; self.min_pts = min_pts; self.data = copy.deepcopy(data); self.dim = self.data[0].pos.size; self.main_list = []; if (self.max_eps == None): self.get_max_eps(); self.main_loop(); def __call__(self, main_idx): return self.data[self.main_list[main_idx]].reach_dist; def main_loop(self): for idx, obj in enumerate(self.data): if (not obj.processed): self.expand_point(idx); for idx, obj in enumerate(self.data): if (not obj.processed): self.append_main(idx); def get_max_eps(self): extr_x = self.get_extr_x(); extr_y = self.get_extr_y(); area = (extr_x[1] - extr_x[0])*(extr_y[1] - extr_y[0]); self.max_eps = ((area*self.min_pts*sc_p.gamma(2))/(len(self.data)*np.sqrt(np.pi**2)))**0.5 def get_extr_x(self): min_x = float("inf"); max_x = -float("inf"); for obj in self.data: if obj.pos[0] < min_x: min_x = obj.pos[0]; if obj.pos[0] > max_x: max_x = obj.pos[0]; return (min_x, max_x); def get_extr_y(self): min_y = float("inf"); max_y = -float("inf"); for obj in self.data: if obj.pos[1] < min_y: min_y = obj.pos[1]; if obj.pos[1] > max_y: max_y = obj.pos[1]; return (min_y, max_y); def append_main(self, idx): self.data[idx].processed = True; if (self.data[idx].reach_dist == None): self.data[idx].reach_dist = self.max_eps; self.main_list.append(idx); def expand_point(self, idx): self.get_neighbours(idx); self.get_core_dist(idx); if (self.data[idx].core_dist == -1): return; else: self.data[idx].processed = True; self.append_main(idx); seed_list = []; self.append_seed(seed_list, self.data[idx].neighbours, idx) while (len(seed_list) > 0): curr_idx = seed_list[0]; self.get_neighbours(curr_idx); self.get_core_dist(curr_idx); self.data[curr_idx].processed = True; self.append_main(curr_idx); self.remove_seed(seed_list); if (not (self.data[curr_idx].core_dist == -1)): self.append_seed(seed_list, self.data[curr_idx].neighbours, curr_idx); def get_core_dist(self, idx): if (len(self.data[idx].neighbours) >= self.min_pts): self.data[idx].core_dist = self.data[idx].neighbours[self.min_pts - 1][1]; else: self.data[idx].core_dist = -1; def get_reach_dist(self, center_idx, idx, dist): r_dist = max(dist, self.data[center_idx].core_dist); if (self.data[idx].reach_dist == None): self.data[idx].reach_dist = r_dist; return True; elif (self.data[idx].reach_dist > r_dist): self.data[idx].reach_dist = r_dist; return True; else: return False; def get_neighbours(self, idx): self.data[idx].neighbours = []; for n_idx, obj in enumerate(self.data): dist = euclid(obj, self.data[idx]) if (dist <= self.max_eps): self.data[idx].neighbours.append([n_idx, dist]); self.data[idx].neighbours.sort(key = lambda x : x[1]); def append_seed(self, seed_list, neighbours, center_idx): for n_tup in neighbours: changed = self.get_reach_dist(center_idx, n_tup[0], n_tup[1]); if (self.data[n_tup[0]].in_seed and changed): del seed_list[seed_list.index(n_tup[0])]; self.data[n_tup[0]].in_seed = False; elif (self.data[n_tup[0]].processed or self.data[n_tup[0]].in_seed): continue; for idx, obj in enumerate(seed_list): if ( self.data[n_tup[0]].reach_dist < self.data[obj].reach_dist ): seed_list.insert(idx, n_tup[0]); self.data[n_tup[0]].in_seed = True; break; if (not self.data[n_tup[0]].in_seed): seed_list.append(n_tup[0]); self.data[n_tup[0]].in_seed = True; def remove_seed(self, seed_list): self.data[seed_list[0]].in_seed = False; del seed_list[0]; def reach_plot(self): x = list(range(len(self.main_list))); y = []; for idx in self.main_list: y.append(self.data[idx].reach_dist); f, ax = plt.subplots(); ax.bar(x, y); def print_reach_dist(self): for idx in self.main_list: print (idx) print (self.data[idx].reach_dist) def plot_data(self): x = []; y = []; for obj in self.data: x.append(obj.pos[0]); y.append(obj.pos[1]); f, ax = plt.subplots(); ax.scatter(x, y); def get_num_clusters(self): clusters = []; up = True; top, bottom = -1, -1; for i, idx in enumerate(self.main_list[:-1]): if (up and (self.data[idx].reach_dist > self.data[self.main_list[i + 1]])): up = not up; if (not bottom == -1): clusters.append(top - bottom); top = self.data[idx].reach_dist; continue; if (not up) and (self.data[idx].reach_dist < self.data[self.main_list[i + 1]].reach_dist): up = not up; bottom = self.data[idx].reach_dist; class Clusters: def __init__(optics_obj, eps): self.optics_obj = optics_obj; self.main_list = optics_obj.main_list; self.eps = eps; self.min_pts = optics_obj.min_pts; def find(self): idx = 0; #down, up = False, False; downs = []; clusters = []; while idx < len(self.main_list): diff = self.main_list[idx] - self.main_list[idx + 1]; if (diff >= self.optics_obj(idx)*self.eps): new_down, idx = self.proc_down(idx); downs.append([new_down, -float("inf")]); #glob_mib = self.optics_obj(downs[-1][0][0]]); #self.filter_downs(glob_mib, downs); elif (-diff >= self.optics_obj(idx)*self.eps): glob_mib = self.get_glob_mib(downs[-1], idx); self.filter_downs(glob_mib, downs); up, idx = self.proc_up(idx); for down in downs: if (self.optics_obj(up[1]).reach_dist*(1 - self.eps) >= down[1]): clusters.append((down[0][0], up[1])); else: idx += 1; def get_glob_mib(self, last_down, curr_idx): begin_idx, end_idx = last_down[0][1], curr_idx; glob_mib = -float("inf"); for i in range(begin_idx, end_idx + 1): if (self.optics_obj(i) > glob_mib): glob_mib = self.optics_obj(i); return glob_mib; def proc_down(self, idx): bad_inrow = 0; begin_idx = idx; while (idx < len(self.main_list)): idx += 1; diff = self.main_list[idx].reach_dist - self.main_list[idx + 1].reach_dist; if (diff < 0): return (begin_idx, idx - 1); if (diff > 0): if (diff >= self.eps*self.main_list[idx]): bad_inrow = 0; else: if (bad_inrow == 0): last_good = idx - 1; bad_inrow += 1; if bad_inrow > self.min_pts: # include a check that ensures region does not have # length zero? return (begin_idx, last_good), idx; def proc_up(self, idx): bad_inrow = 0; begin_idx = idx; while (idx < len(self.main_list)): idx += 1; diff = self.main_list[idx].reach_dist[idx + 1] - self.main_list[idx].reach_dist; if (diff < 0): return (begin_idx, idx - 1); if (diff > 0): if (diff >= self.eps*self.main_list[idx + 1]): bad_inrow = 0; else: if (bad_inrow == 0): last_good = idx - 1; bad_inrow += 1; if (bad_inrow > self.min_pts): return (begin_idx, last_good), idx; def filter_downs(self, glob_mib, downs): del_idx = []; for idx, obj in enumerate(downs[:-1]): if self.main_list[obj[0][0]].reach_dist*(1 - self.eps) < glob_mib: del_idx.append(idx); elif (obj[1] < glob_mib): downs[idx][1] = glob_mib; del_idx.reverse(); for i in del_idx: del downs[i]; dat = gen_clusters([[1, 1], [6, 7], [10, 15], [15, 15]], 200); data = make_pts(dat); optics = OPTICS(15, data); optics.reach_plot(); optics.plot_data(); plt.show(); #optics.print_reach_dist(); print ("Done")
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model_utils.py
PreferredAI/vista-net
75
70693
<filename>model_utils.py import tensorflow as tf import numpy as np import os def get_shape(tensor): static_shape = tensor.shape.as_list() dynamic_shape = tf.unstack(tf.shape(tensor)) dims = [s[1] if s[0] is None else s[0] for s in zip(static_shape, dynamic_shape)] return dims def make_dirs(dir): next_idx = 1 if tf.gfile.Exists(dir): folder_list = sorted([int(f) for f in os.listdir(dir)]) if len(folder_list) > 0: next_idx = folder_list[-1] + 1 new_folder = os.path.join(dir, str(next_idx)) tf.gfile.MakeDirs(new_folder) return new_folder def count_parameters(trained_vars): total_parameters = 0 print('=' * 100) for variable in trained_vars: variable_parameters = 1 for dim in variable.get_shape(): variable_parameters *= dim.value print('{:70} {:20} params'.format(variable.name, variable_parameters)) print('-' * 100) total_parameters += variable_parameters print('=' * 100) print("Total trainable parameters: %d" % total_parameters) print('=' * 100) def load_glove(vocab_size, emb_size): print('Loading Glove word embeddings ...') embedding_weights = {} f = open('glove/glove.6B.{}d.txt'.format(emb_size), encoding='utf-8') for line in f: values = line.split() word = values[0] coefs = np.asarray(values[1:], dtype='float32') embedding_weights[word] = coefs f.close() print('Total {} word vectors in Glove 6B {}d.'.format(len(embedding_weights), emb_size)) embedding_matrix = np.random.uniform(-0.5, 0.5, (vocab_size, emb_size)) embedding_matrix[0, :] = np.zeros(emb_size) # alignment word for blank image oov_count = 0 from data_preprocess import load_vocabulary for word, i in load_vocabulary().items(): embedding_vector = embedding_weights.get(word) if embedding_vector is not None: embedding_matrix[i] = embedding_vector else: oov_count += 1 print('Number of OOV words: %d' % oov_count) return embedding_matrix
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Students/Zephyr/Exercise 1.py
MikelShifrin/Python1
3
33943
<filename>Students/Zephyr/Exercise 1.py name = input('Please enter your name:\n') age = int(input("Please enter your age:\n")) color = input('Enter your favorite color:\n') animal = input('Enter your favorite animal:\n') print('Hello my name is' , name , '.') print('I am' , age , 'years old.') print('My favorite color is' , color ,'.') print('My favorite animal is the' , animal , '.')
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plasmapy/examples/plot_distribution.py
techieashish/PlasmaPy
1
30683
<reponame>techieashish/PlasmaPy<gh_stars>1-10 """ 1D Maxwellian distribution function =================================== We import the usual modules, and the hero of this notebook, the Maxwellian 1D distribution: """ import numpy as np from astropy import units as u import matplotlib.pyplot as plt from astropy.constants import (m_e, k_B) from plasmapy.formulary import Maxwellian_1D ############################################################ # Given we'll be plotting, import astropy's quantity support: from astropy.visualization import quantity_support quantity_support() ############################################################ # As a first example, let's get the probability density of # finding an electron with a speed of 1 m/s if we have a # plasma at a temperature of 30 000 K: p_dens = Maxwellian_1D(v=1 * u.m / u.s, T=30000 * u.K, particle='e', v_drift=0 * u.m / u.s) print(p_dens) ############################################################ # Note the units! Integrated over speed, this will give us a # probability. Let's test that for a bunch of particles: T = 3e4 * u.K dv = 10 * u.m / u.s v = np.arange(-5e6, 5e6, 10) * u.m / u.s ############################################################ # Check that the integral over all speeds is 1 # (the particle has to be somewhere): for particle in ['p', 'e']: pdf = Maxwellian_1D(v, T=T, particle=particle) integral = (pdf).sum() * dv print(f"Integral value for {particle}: {integral}") plt.plot(v, pdf, label=particle) plt.legend() ############################################################ # The standard deviation of this distribution should give us back the # temperature: std = np.sqrt((Maxwellian_1D(v, T=T, particle='e') * v ** 2 * dv).sum()) T_theo = (std ** 2 / k_B * m_e).to(u.K) print('T from standard deviation:', T_theo) print('Initial T:', T)
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babybuddy/migrations/0002_add_settings.py
Gitoffomalawn/babybuddy
922
118771
<reponame>Gitoffomalawn/babybuddy # -*- coding: utf-8 -*- from django.db import migrations def add_settings(apps, schema_editor): Settings = apps.get_model("babybuddy", "Settings") User = apps.get_model("auth", "User") for user in User.objects.all(): if Settings.objects.filter(user=user).count() == 0: settings = Settings.objects.create(user=user) settings.save() class Migration(migrations.Migration): initial = True dependencies = [ ("babybuddy", "0001_initial"), ] operations = [ migrations.RunPython(add_settings, reverse_code=migrations.RunPython.noop), ]
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chemdataextractor/scrape/__init__.py
edbeard/chemdataextractor-uvvis2018
6
66749
# -*- coding: utf-8 -*- """ chemdataextractor.scrape ~~~~~~~~~~~~~~~~~~~~~~~~ Declarative scraping framework for extracting structured data from HTML and XML documents. :copyright: Copyright 2016 by <NAME>. :license: MIT, see LICENSE file for more details. """ from __future__ import absolute_import from __future__ import division from __future__ import print_function from __future__ import unicode_literals #: Block level HTML elements BLOCK_ELEMENTS = { 'p', 'h1', 'h2', 'h3', 'h4', 'h5', 'h6', 'ul', 'ol', 'pre', 'dd', 'dl', 'div', 'noscript', 'blockquote', 'form', 'hr', 'table', 'fieldset', 'address', 'article', 'aside', 'audio', 'canvas', 'figcaption', 'figure', 'footer', 'header', 'hgroup', 'output', 'section', 'body', 'head', 'title', 'tr', 'td', 'th', 'thead', 'tfoot', 'dt', 'li', 'tbody', } #: Inline level HTML elements INLINE_ELEMENTS = { 'b', 'big', 'i', 'small', 'tt', 'abbr', 'acronym', 'cite', 'code', 'dfn', 'em', 'kbd', 'strong', 'samp', 'var', 'a', 'bdo', 'br', 'img', 'map', 'object', 'q', 'script', 'span', 'sub', 'sup', 'button', 'input', 'label', 'select', 'textarea', 'blink', 'font', 'marquee', 'nobr', 's', 'strike', 'u', 'wbr', } from .clean import Cleaner, clean, clean_html, clean_markup from .entity import Entity, EntityList, DocumentEntity from .fields import StringField, IntField, FloatField, BoolField, DateTimeField, EntityField, UrlField from .scraper import HtmlFormat, XmlFormat, GetRequester, PostRequester, UrlScraper, RssScraper, SearchScraper from .selector import Selector, SelectorList from .pub.nlm import NlmXmlDocument from .pub.rsc import RscHtmlDocument from .pub.springer import SpringerXmlDocument
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application/siteApp/urls.py
Marcelotsvaz/vaz-projects
0
859
# # VAZ Projects # # # Author: <NAME> <<EMAIL>> from django.urls import path from . import views app_name = 'siteApp' urlpatterns = [ path( '', views.Home.as_view(), name = 'home' ), path( 'about-me', views.About_me.as_view(), name = 'about_me' ), path( 'search', views.Search.as_view(), name = 'search' ), path( 'search/page/<int:page>', views.Search.as_view(), name = 'search' ), path( 'sitemap.xml', views.Sitemap.as_view(), name = 'sitemap' ), ]
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examples/poverty-detection-keras/pred_cong_pd.py
rpitonak/eo-learn
1
101937
<filename>examples/poverty-detection-keras/pred_cong_pd.py """ Note: After we have the tf-serving image running, we don't actually need following script. pred_config.py List some configuration parameters for prediction """ import os from os import path as op preds_dir = op.join(os.getcwd(), "preds") plot_dir = op.join(os.getcwd(), "plots") ckpt_dir = op.join(os.getcwd(), "models") # Params to run inference on some tiles in S3 pred_params = dict(model_time='0813_192409', #201910_L5.39 single_batch_size=16, # Number of images seen by a single GPU n_gpus=1, deci_prec=2) # Number of decimal places in prediction precision pred_params.update(dict(model_arch_fname='{}_arch.yaml'.format(pred_params['model_time']), model_params_fname='{}_params.yaml'.format(pred_params['model_time']), model_weights_fname='{}_L1.20_E13_weights.h5'.format(pred_params['model_time'])))
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msl/qt/exceptions.py
rebeccahawke/msl-qt
0
43114
""" Exception handling used by **MSL-Qt**. """ import logging import traceback from . import QtWidgets, Qt, application logger = logging.getLogger(__name__) def excepthook(exc_type, exc_obj, exc_traceback): """Displays unhandled exceptions in a :class:`QtWidgets.QMessageBox`. See :func:`sys.excepthook` for more details. To implement the :func:`excepthook` in your own application include the following: .. code-block:: python import sys from msl import qt sys.excepthook = qt.excepthook """ def event_handler(e): """Resize the QMessageBox""" result = QtWidgets.QMessageBox.event(msg, e) detailed_text = msg.findChild(QtWidgets.QTextEdit) if not detailed_text or not detailed_text.isVisible(): return result detailed_text.setMaximumSize(QtWidgets.QWIDGETSIZE_MAX, QtWidgets.QWIDGETSIZE_MAX) detailed_text.setSizePolicy(Qt.QSizePolicy.Expanding, Qt.QSizePolicy.Expanding) msg.setMaximumSize(QtWidgets.QWIDGETSIZE_MAX, QtWidgets.QWIDGETSIZE_MAX) msg.setSizePolicy(Qt.QSizePolicy.Expanding, Qt.QSizePolicy.Expanding) return result details = ''.join( ['Traceback (most recent call last):\n'] + traceback.format_tb(exc_traceback) + [exc_obj.__class__.__name__ + ': ' + str(exc_obj)] ) logger.error(details) # ensure that a QApplication exists app = application() # add a prefix to the title bar w = app.activeWindow() prefix = 'MSL' if w is None or not w.windowTitle() else w.windowTitle() msg = QtWidgets.QMessageBox() # want to be able to resize the QMessageBox to allow for the # DetailedText to be read easier # see http://www.qtcentre.org/threads/24888-Resizing-a-QMessageBox msg.event = event_handler msg.setSizeGripEnabled(True) msg.setWindowTitle(prefix + ' || Unhandled Exception') msg.setIcon(QtWidgets.QMessageBox.Critical) msg.setText(exc_obj.__class__.__name__ + ':') msg.setInformativeText(str(exc_obj)) msg.setDetailedText(details) msg.raise_() msg.exec_()
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Data Structures/Heap/JesseAndCookies.py
aibenStunner/HackerRank
2
37149
#!/bin/python3 import os import sys class minHeap: def __init__(self): self.items = [] self.size = len(self.items) def getLeftChildIndex(self, parentIndex): return 2 * parentIndex + 1 def getRightChildIndex(self, parentIndex): return 2 * parentIndex + 2 def getParentIndex(self, childIndex): return int((childIndex - 1) / 2) def hasLeftChild(self, index): return self.getLeftChildIndex(index) < self.size def hasRightChild(self, index): return self.getRightChildIndex(index) < self.size def hasParent(self, index): return self.getParentIndex(index) >= 0 def leftChild(self, index): return self.items[self.getLeftChildIndex(index)] def rightChild(self, index): return self.items[self.getRightChildIndex(index)] def parent(self, index): return self.items[self.getParentIndex(index)] def swap(self, indexOne, indexTwo): temp = self.items[indexOne] self.items[indexOne] = self.items[indexTwo] self.items[indexTwo] = temp def pop(self): if self.size == 0: raise Exception("Empty Heap!!") else: item = self.items[0] self.items[0] = self.items[self.size - 1] del(self.items[self.size - 1]) self.size = len(self.items) self.heapifyDown() return item def peek(self): if self.size == 0: raise Exception("Empty Heap!!") else: return self.items[0] def add(self, item): self.items.append(item) self.size = len(self.items) self.heapifyUp() def heapify(self, arr): for elem in arr: self.add(elem) def heapifyUp(self): index = self.size - 1 while (self.hasParent(index) and self.parent(index) > self.items[index]): self.swap(self.getParentIndex(index), index) index = self.getParentIndex(index) def heapifyDown(self): index = 0 while(self.hasLeftChild(index)): smallerChildIndex = self.getLeftChildIndex(index) if(self.hasRightChild(index) and self.rightChild(index) < self.leftChild(index)): smallerChildIndex = self.getRightChildIndex(index) if(self.items[index] < self.items[smallerChildIndex]): break else: self.swap(index, smallerChildIndex) index = smallerChildIndex # # Complete the cookies function below. # def cookies(k, A): qHeap = minHeap() qHeap.heapify(A) count = 0 try: while qHeap.peek() < k: count += 1 a, b = qHeap.pop(), qHeap.pop() newCookie = (1*a)+(2*b) qHeap.add(newCookie) return count except: return -1 if __name__ == '__main__': # fptr = open(os.environ['OUTPUT_PATH'], 'w') nk = input().split() n = int(nk[0]) k = int(nk[1]) A = list(map(int, input().rstrip().split())) result = cookies(k, A) print(result) # fptr.write(str(result) + '\n') # fptr.close() # def cookies(k, A): # from heapq import heappop,heappush,heapify # heapify(A) # fC = 0 # try: # while A[0] < k: # fC+=1 # c1 = heappop(A) # c2 = heappop(A) # newCookie=(1*c1)+(2*c2) # heappush(A,newCookie) # return fC # except: # return -1
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sdk/eventhub/azure-eventhub/tests/eventhub_preparer.py
rsdoherty/azure-sdk-for-python
2,728
1607590
<reponame>rsdoherty/azure-sdk-for-python<filename>sdk/eventhub/azure-eventhub/tests/eventhub_preparer.py #------------------------------------------------------------------------- # Copyright (c) Microsoft Corporation. All rights reserved. # Licensed under the MIT License. See License.txt in the project root for # license information. #-------------------------------------------------------------------------- # This EventHubs resource preparer is for future use after the tests are all compatible with # The resource preparer. import functools from azure.mgmt.eventhub import EventHubManagementClient from azure.mgmt.eventhub.models import Eventhub, AccessRights from azure_devtools.scenario_tests.exceptions import AzureTestError from devtools_testutils import ( ResourceGroupPreparer, AzureMgmtPreparer, FakeResource ) from devtools_testutils.resource_testcase import RESOURCE_GROUP_PARAM EVENTHUB_DEFAULT_AUTH_RULE_NAME = 'RootManageSharedAccessKey' EVENTHUB_NAMESPACE_PARAM = 'eventhub_namespace' EVENTHUB_PARAM = 'eventhub' EVENTHUB_AUTHORIZATION_RULE_PARAM = 'eventhub_authorization_rule' # Service Bus Namespace Preparer and its shorthand decorator class EventHubNamespacePreparer(AzureMgmtPreparer): def __init__(self, name_prefix='', use_cache=False, sku='Standard', location='westus', parameter_name=EVENTHUB_NAMESPACE_PARAM, resource_group_parameter_name=RESOURCE_GROUP_PARAM, disable_recording=True, playback_fake_resource=None, client_kwargs=None, random_name_enabled=True): super(EventHubNamespacePreparer, self).__init__(name_prefix, 24, random_name_enabled=random_name_enabled, disable_recording=disable_recording, playback_fake_resource=playback_fake_resource, client_kwargs=client_kwargs) self.location = location self.sku = sku self.resource_group_parameter_name = resource_group_parameter_name self.parameter_name = parameter_name self.connection_string = '' if random_name_enabled: self.resource_moniker = self.name_prefix + "ehname" self.set_cache(use_cache, sku, location) def create_resource(self, name, **kwargs): if self.is_live: self.client = self.create_mgmt_client(EventHubManagementClient) # type: EventHubManagementClient group = self._get_resource_group(**kwargs) namespace_async_operation = self.client.namespaces.begin_create_or_update( group.name, name, { 'sku': {'name': self.sku}, 'location': self.location, } ) self.resource = namespace_async_operation.result() key = self.client.namespaces.list_keys(group.name, name, EVENTHUB_DEFAULT_AUTH_RULE_NAME) self.connection_string = key.primary_connection_string self.key_name = key.key_name self.primary_key = key.primary_key else: self.resource = FakeResource(name=name, id=name) self.connection_string = 'Endpoint=sb://{}.servicebus.windows.net/;SharedAccessKeyName=test;SharedAccessKey=<KEY>='.format(name) self.key_name = EVENTHUB_DEFAULT_AUTH_RULE_NAME self.primary_key = '<KEY> return { self.parameter_name: self.resource, '{}_connection_string'.format(self.parameter_name): self.connection_string, '{}_key_name'.format(self.parameter_name): self.key_name, '{}_primary_key'.format(self.parameter_name): self.primary_key, '{}_management_client'.format(self.parameter_name): self.client } def remove_resource(self, name, **kwargs): if self.is_live: group = self._get_resource_group(**kwargs) self.client.namespaces.begin_delete(group.name, name).wait() def _get_resource_group(self, **kwargs): try: return kwargs.get(self.resource_group_parameter_name) except KeyError: template = 'To create an event hub a resource group is required. Please add ' \ 'decorator @{} in front of this event hub preparer.' raise AzureTestError(template.format(ResourceGroupPreparer.__name__)) # Shared base class for event hub sub-resources that require a namespace and RG to exist. class _EventHubChildResourcePreparer(AzureMgmtPreparer): def __init__(self, name_prefix='', resource_group_parameter_name=RESOURCE_GROUP_PARAM, eventhub_namespace_parameter_name=EVENTHUB_NAMESPACE_PARAM, disable_recording=True, playback_fake_resource=None, client_kwargs=None, random_name_enabled=True): super(_EventHubChildResourcePreparer, self).__init__(name_prefix, 24, random_name_enabled=random_name_enabled, disable_recording=disable_recording, playback_fake_resource=playback_fake_resource, client_kwargs=client_kwargs) self.resource_group_parameter_name = resource_group_parameter_name self.eventhub_namespace_parameter_name = eventhub_namespace_parameter_name def _get_resource_group(self, **kwargs): try: return kwargs.get(self.resource_group_parameter_name) except KeyError: template = 'To create this event hub child resource event hub a resource group is required. Please add ' \ 'decorator @{} in front of this event hub preparer.' raise AzureTestError(template.format(ResourceGroupPreparer.__name__)) def _get_namespace(self, **kwargs): try: return kwargs.get(self.eventhub_namespace_parameter_name) except KeyError: template = 'To create this event hub child resource a event hub namespace is required. Please add ' \ 'decorator @{} in front of this event hub preparer.' raise AzureTestError(template.format(EventHubNamespacePreparer.__name__)) class EventHubPreparer(_EventHubChildResourcePreparer): def __init__(self, name_prefix='', use_cache=False, parameter_name=EVENTHUB_PARAM, resource_group_parameter_name=RESOURCE_GROUP_PARAM, eventhub_namespace_parameter_name=EVENTHUB_NAMESPACE_PARAM, disable_recording=True, playback_fake_resource=None, client_kwargs=None, random_name_enabled=True): super(EventHubPreparer, self).__init__(name_prefix, random_name_enabled=random_name_enabled, resource_group_parameter_name=resource_group_parameter_name, eventhub_namespace_parameter_name=eventhub_namespace_parameter_name, disable_recording=disable_recording, playback_fake_resource=playback_fake_resource, client_kwargs=client_kwargs) self.parameter_name = parameter_name if random_name_enabled: self.resource_moniker = self.name_prefix + "eventhub" self.set_cache(use_cache) def create_resource(self, name, **kwargs): if self.is_live: self.client = self.create_mgmt_client(EventHubManagementClient) group = self._get_resource_group(**kwargs) namespace = self._get_namespace(**kwargs) self.resource = self.client.event_hubs.create_or_update( group.name, namespace.name, name, {} ) else: self.resource = FakeResource(name=name, id=name) return { self.parameter_name: self.resource, } def remove_resource(self, name, **kwargs): if self.is_live: group = self._get_resource_group(**kwargs) namespace = self._get_namespace(**kwargs) self.client.event_hubs.delete(group.name, namespace.name, name, polling=False) class EventHubNamespaceAuthorizationRulePreparer(_EventHubChildResourcePreparer): def __init__(self, name_prefix='', use_cache=False, access_rights=[AccessRights.manage, AccessRights.send, AccessRights.listen], parameter_name=EVENTHUB_AUTHORIZATION_RULE_PARAM, resource_group_parameter_name=RESOURCE_GROUP_PARAM, eventhub_namespace_parameter_name=EVENTHUB_NAMESPACE_PARAM, disable_recording=True, playback_fake_resource=None, client_kwargs=None, random_name_enabled=True): super(EventHubNamespaceAuthorizationRulePreparer, self).__init__(name_prefix, random_name_enabled=random_name_enabled, resource_group_parameter_name=resource_group_parameter_name, eventhub_namespace_parameter_name=eventhub_namespace_parameter_name, disable_recording=disable_recording, playback_fake_resource=playback_fake_resource, client_kwargs=client_kwargs) self.parameter_name = parameter_name self.access_rights = access_rights if random_name_enabled: self.resource_moniker = self.name_prefix + "sbnameauth" self.set_cache(use_cache, access_rights) def create_resource(self, name, **kwargs): if self.is_live: self.client = self.create_mgmt_client(EventHubManagementClient) group = self._get_resource_group(**kwargs) namespace = self._get_namespace(**kwargs) self.resource = self.client.namespaces.create_or_update_authorization_rule( group.name, namespace.name, name, self.access_rights ) key = self.client.namespaces.list_keys(group.name, namespace.name, name) connection_string = key.primary_connection_string else: self.resource = FakeResource(name=name, id=name) connection_string = 'https://microsoft.com' return { self.parameter_name: self.resource, '{}_connection_string'.format(self.parameter_name): connection_string, } def remove_resource(self, name, **kwargs): if self.is_live: group = self._get_resource_group(**kwargs) namespace = self._get_namespace(**kwargs) self.client.namespaces.delete_authorization_rule(group.name, namespace.name, name, polling=False) class EventHubAuthorizationRulePreparer(_EventHubChildResourcePreparer): def __init__(self, name_prefix='', use_cache=False, access_rights=[AccessRights.manage, AccessRights.send, AccessRights.listen], parameter_name=EVENTHUB_AUTHORIZATION_RULE_PARAM, resource_group_parameter_name=RESOURCE_GROUP_PARAM, eventhub_namespace_parameter_name=EVENTHUB_NAMESPACE_PARAM, eventhub_parameter_name=EVENTHUB_PARAM, disable_recording=True, playback_fake_resource=None, client_kwargs=None, random_name_enabled=True): super(EventHubAuthorizationRulePreparer, self).__init__(name_prefix, random_name_enabled=random_name_enabled, resource_group_parameter_name=resource_group_parameter_name, eventhub_namespace_parameter_name=eventhub_namespace_parameter_name, disable_recording=disable_recording, playback_fake_resource=playback_fake_resource, client_kwargs=client_kwargs) self.parameter_name = parameter_name self.access_rights = access_rights self.eventhub_parameter_name = eventhub_parameter_name if random_name_enabled: self.resource_moniker = self.name_prefix + "evnethubauth" self.set_cache(use_cache, access_rights) def create_resource(self, name, **kwargs): if self.is_live: self.client = self.create_mgmt_client(EventHubManagementClient) group = self._get_resource_group(**kwargs) namespace = self._get_namespace(**kwargs) eventhub = self._get_eventhub(**kwargs) self.resource = self.client.event_hubs.create_or_update_authorization_rule( group.name, namespace.name, eventhub.name, name, self.access_rights ) key = self.client.event_hubs.list_keys(group.name, namespace.name, eventhub.name, name) connection_string = key.primary_connection_string else: self.resource = FakeResource(name=name, id=name) connection_string = 'https://microsoft.com' return { self.parameter_name: self.resource, '{}_connection_string'.format(self.parameter_name): connection_string, } def remove_resource(self, name, **kwargs): if self.is_live: group = self._get_resource_group(**kwargs) namespace = self._get_namespace(**kwargs) eventhub = self._get_eventhub(**kwargs) self.client.event_hubs.delete_authorization_rule(group.name, namespace.name, eventhub.name, name, polling=False) def _get_eventhub(self, **kwargs): try: return kwargs.get(self.eventhub_parameter_name) except KeyError: template = 'To create this event hub authorization rule a event hub is required. Please add ' \ 'decorator @{} in front of this event hub preparer.' raise AzureTestError(template.format(EventHubPreparer.__name__)) CachedEventHubNamespacePreparer = functools.partial(EventHubNamespacePreparer, use_cache=True) CachedEventHubPreparer = functools.partial(EventHubPreparer, use_cache=True)
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rnn/chatbot/chatbot.py
llichengtong/yx4
128
21467
# coding=utf8 import logging import os import random import re import numpy as np import tensorflow as tf from seq2seq_conversation_model import seq2seq_model from seq2seq_conversation_model import data_utils from seq2seq_conversation_model import tokenizer from seq2seq_conversation_model.seq2seq_conversation_model import FLAGS, _buckets from settings import SEQ2SEQ_MODEL_DIR _LOGGER = logging.getLogger('track') UNK_TOKEN_REPLACEMENT = [ '?', '我不知道你在说什么', '什么鬼。。。', '宝宝不知道你在说什么呐。。。', ] ENGLISHWORD_PATTERN = re.compile(r'[a-zA-Z0-9]') def is_unichar_englishnum(char): return ENGLISHWORD_PATTERN.match(char) def trim(s): """ 1. delete every space between chinese words 2. suppress extra spaces :param s: some python string :return: the trimmed string """ if not (isinstance(s, unicode) or isinstance(s, str)): return s unistr = s.decode('utf8') if type(s) != unicode else s unistr = unistr.strip() if not unistr: return '' trimmed_str = [] if unistr[0] != ' ': trimmed_str.append(unistr[0]) for ind in xrange(1, len(unistr) - 1): prev_char = unistr[ind - 1] if len(trimmed_str) == 0 else trimmed_str[-1] cur_char = unistr[ind] maybe_trim = cur_char == ' ' next_char = unistr[ind + 1] if not maybe_trim: trimmed_str.append(cur_char) else: if is_unichar_englishnum(prev_char) and is_unichar_englishnum(next_char): trimmed_str.append(cur_char) else: continue if unistr[-1] != ' ': trimmed_str.append(unistr[-1]) return ''.join(trimmed_str) class Chatbot(): """ answer an enquiry using trained seq2seq model """ def __init__(self, model_dir): # Create model and load parameters. self.session = tf.InteractiveSession() self.model = self.create_model(self.session, model_dir, True) self.model.batch_size = 1 # Load vocabularies. vocab_path = os.path.join(FLAGS.data_dir, "vocab%d" % FLAGS.vocab_size) self.vocab, self.rev_vocab = data_utils.initialize_vocabulary(vocab_path) def create_model(self, session, model_dir, forward_only): """Create conversation model and initialize or load parameters in session.""" model = seq2seq_model.Seq2SeqModel( FLAGS.vocab_size, FLAGS.vocab_size, _buckets, FLAGS.size, FLAGS.num_layers, FLAGS.max_gradient_norm, FLAGS.batch_size, FLAGS.learning_rate, FLAGS.learning_rate_decay_factor, use_lstm=FLAGS.use_lstm, forward_only=forward_only) ckpt = tf.train.get_checkpoint_state(model_dir) if ckpt and tf.train.checkpoint_exists(ckpt.model_checkpoint_path): _LOGGER.info("Reading model parameters from %s" % ckpt.model_checkpoint_path) model.saver.restore(session, ckpt.model_checkpoint_path) _LOGGER.info("Read model parameter succeed!") else: raise ValueError( "Failed to find legal model checkpoint files in %s" % model_dir) return model def generate_answer(self, enquiry): # Get token-ids for the input sentence. token_ids = data_utils.sentence_to_token_ids(enquiry, self.vocab, tokenizer.fmm_tokenizer) if len(token_ids) == 0: _LOGGER.error('lens of token ids of sentence %s is 0' % enquiry) # Which bucket does it belong to? bucket_id = min([b for b in xrange(len(_buckets)) if _buckets[b][0] > len(token_ids)]) # Get a 1-element batch to feed the sentence to the model. encoder_inputs, decoder_inputs, target_weights = self.model.get_batch( {bucket_id: [(token_ids, [])]}, bucket_id) # Get output logits for the sentence. _, _, output_logits = self.model.step(self.session, encoder_inputs, decoder_inputs, target_weights, bucket_id, True) # This is a greedy decoder - outputs are just argmaxes of output_logits. outputs = [int(np.argmax(logit, axis=1)) for logit in output_logits] # If there is an EOS symbol in outputs, cut them at that point. if tokenizer.EOS_ID in outputs: outputs = outputs[:outputs.index(tokenizer.EOS_ID)] # Print out response sentence corresponding to outputs. answer = " ".join([self.rev_vocab[output] for output in outputs]) if tokenizer._UNK in answer: answer = random.choice(UNK_TOKEN_REPLACEMENT) answer = trim(answer) return answer def close(self): self.session.close() if __name__ == "__main__": m = Chatbot(SEQ2SEQ_MODEL_DIR + '/train/') response = m.generate_answer(u'我知道你不知道我知道你不知道我说的是什么意思') print response
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sfymca/feed/urls.py
streeter/sf-ymca-pools
0
95030
<reponame>streeter/sf-ymca-pools from django.urls import path from sfymca.feed import views urlpatterns = [ path("", views.index, name="index"), path("<branch_name>.ics", views.branch_calendar, name="branch_calendar"), path("<branch_name>/", views.branch, name="branch"), ]
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app/__init__.py
HK-Zhang/FlaskAADB2C
0
175366
<filename>app/__init__.py from flask import Flask,url_for from flask_session import Session # https://pythonhosted.org/Flask-Session from flask_cors import CORS from config import appinsightKey,apiversion,load_config from opencensus.ext.azure.trace_exporter import AzureExporter from opencensus.ext.azure.log_exporter import AzureLogHandler from opencensus.ext.flask.flask_middleware import FlaskMiddleware from opencensus.trace.samplers import ProbabilitySampler import logging from flasgger import Swagger,swag_from from os import listdir from os.path import isfile, join import socket import app_config_b2c # This section is needed for url_for("foo", _external=True) to automatically # generate http scheme when this sample is running on localhost, # and to generate https scheme when it is deployed behind reversed proxy. # See also https://flask.palletsprojects.com/en/1.0.x/deploying/wsgi-standalone/#proxy-setups from werkzeug.middleware.proxy_fix import ProxyFix hostname=socket.gethostname() format_str = f'{apiversion}@{hostname} says:'+'%(asctime)s - %(levelname)-8s - %(message)s' date_format = '%Y-%m-%d %H:%M:%S' logging.basicConfig(level=logging.INFO) formatter = logging.Formatter(format_str, date_format) rootlogger = logging.getLogger() app = Flask(__name__) CORS(app) app.config.from_object(app_config_b2c) Session(app) handler = AzureLogHandler(connection_string=f'InstrumentationKey={appinsightKey}') handler.setFormatter(formatter) rootlogger.addHandler(handler) middleware = FlaskMiddleware(app,exporter=AzureExporter(connection_string=f'InstrumentationKey={appinsightKey}'),sampler=ProbabilitySampler(rate=1.0)) app.wsgi_app = ProxyFix(app.wsgi_app, x_proto=1, x_host=1) load_config() Swagger(app) from app.api import api as api_blueprint app.register_blueprint(api_blueprint, url_prefix='/v1') from app.web import web as web_blueprint app.register_blueprint(web_blueprint) from app.web.views import _build_auth_url app.jinja_env.globals.update( _build_auth_url=_build_auth_url) # Used in template logging.info(f'App Started {apiversion}.')
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ironic_inspector/cmd/dbsync.py
namnx228/ironic-inspector
31
10566
<gh_stars>10-100 # Copyright 2015 Cisco Systems # All Rights Reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); you may # not use this file except in compliance with the License. You may obtain # a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, WITHOUT # WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the # License for the specific language governing permissions and limitations # under the License. import os import sys from alembic import command as alembic_command from alembic import config as alembic_config from alembic import util as alembic_util from oslo_config import cfg from oslo_log import log from ironic_inspector import conf # noqa CONF = cfg.CONF def add_alembic_command(subparsers, name): return subparsers.add_parser( name, help=getattr(alembic_command, name).__doc__) def add_command_parsers(subparsers): for name in ['current', 'history', 'branches', 'heads']: parser = add_alembic_command(subparsers, name) parser.set_defaults(func=do_alembic_command) for name in ['stamp', 'show', 'edit']: parser = add_alembic_command(subparsers, name) parser.set_defaults(func=with_revision) parser.add_argument('--revision', nargs='?', required=True) parser = add_alembic_command(subparsers, 'upgrade') parser.set_defaults(func=with_revision) parser.add_argument('--revision', nargs='?') parser = add_alembic_command(subparsers, 'revision') parser.set_defaults(func=do_revision) parser.add_argument('-m', '--message') parser.add_argument('--autogenerate', action='store_true') command_opt = cfg.SubCommandOpt('command', title='Command', help='Available commands', handler=add_command_parsers) def _get_alembic_config(): base_path = os.path.split(os.path.dirname(__file__))[0] return alembic_config.Config(os.path.join(base_path, 'alembic.ini')) def do_revision(config, cmd, *args, **kwargs): do_alembic_command(config, cmd, message=CONF.command.message, autogenerate=CONF.command.autogenerate) def with_revision(config, cmd, *args, **kwargs): revision = CONF.command.revision or 'head' do_alembic_command(config, cmd, revision) def do_alembic_command(config, cmd, *args, **kwargs): try: getattr(alembic_command, cmd)(config, *args, **kwargs) except alembic_util.CommandError as e: alembic_util.err(str(e)) def main(args=sys.argv[1:]): log.register_options(CONF) CONF.register_cli_opt(command_opt) CONF(args, project='ironic-inspector') config = _get_alembic_config() config.set_main_option('script_location', "ironic_inspector:migrations") config.ironic_inspector_config = CONF CONF.command.func(config, CONF.command.name)
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9891, 29898, 2917, 29892, 8707, 29943, 29889, 6519, 29889, 978, 29897, 13, 2 ]
test/LHS_test.py
misantam/GAparsimony
0
125895
# -*- coding: utf-8 -*- from GAparsimony.lhs.util import isValidLHS, isValidLHS_int from GAparsimony.lhs import geneticLHS, improvedLHS, maximinLHS, optimumLHS, randomLHS, randomLHS_int import pytest @pytest.mark.parametrize("shape", [ (2, 2), (6, 6), (3, 8) ]) def test_randomLHS_int(shape): assert isValidLHS_int(randomLHS_int(*shape)) @pytest.mark.parametrize("shape", [ (2, 2), (6, 6), (3, 8) ]) def test_randomLHS(shape): assert isValidLHS(randomLHS(*shape)) @pytest.mark.parametrize("shape", [ (2, 2), (6, 6), (3, 8) ]) def test_geneticLHS(shape): assert isValidLHS(geneticLHS(*shape)) @pytest.mark.parametrize("shape", [ (2, 2), (6, 6), (3, 8) ]) def test_improvedLHS(shape): assert isValidLHS(improvedLHS(*shape)) @pytest.mark.parametrize("shape", [ (2, 2), (6, 6), (3, 8) ]) def test_maximinLHS(shape): assert isValidLHS(maximinLHS(*shape)) @pytest.mark.parametrize("shape", [ (2, 2), (6, 6), (8, 8) ]) def test_optimumLHS(shape): assert isValidLHS(optimumLHS(*shape))
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model_analyzer/config/run/run_search.py
MarkMoTrin/model_analyzer
115
68183
# Copyright (c) 2021 NVIDIA CORPORATION & AFFILIATES. All rights reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License. from model_analyzer.config.input.objects.config_model_profile_spec \ import ConfigModelProfileSpec from model_analyzer.constants import LOGGER_NAME, THROUGHPUT_GAIN import copy import logging logger = logging.getLogger(LOGGER_NAME) class RunSearch: """ A class responsible for searching the config space. """ def __init__(self, config): self._max_concurrency = config.run_config_search_max_concurrency self._max_instance_count = config.run_config_search_max_instance_count self._max_preferred_batch_size = config.run_config_search_max_preferred_batch_size self._sweep_preferred_batch_size_disable = config.run_config_search_preferred_batch_size_disable self._model_config_parameters = {'instance_count': 1} self._measurements = [] self._last_batch_length = None # Run search operating mode self._sweep_mode_function = None def _create_model_config(self, cpu_only=False): """ Generate the model config sweep to be used. """ model_config = self._model_config_parameters new_config = {} if 'dynamic_batching' in model_config: if model_config['dynamic_batching'] is None: new_config['dynamic_batching'] = {} else: new_config['dynamic_batching'] = { 'preferred_batch_size': [model_config['dynamic_batching']] } if 'instance_count' in model_config: if not cpu_only: new_config['instance_group'] = [{ 'count': model_config['instance_count'], 'kind': 'KIND_GPU' }] else: new_config['instance_group'] = [{ 'count': model_config['instance_count'], 'kind': 'KIND_CPU' }] return new_config def add_measurements(self, measurements): """ Add the measurments that are the result of running the sweeps. Parameters ---------- measurements : list list of measurements """ self._last_batch_length = len(measurements) # The list will contain one parameter, because we are experimenting # with one value at a time. self._measurements += measurements def _step_instance_count(self): """ Advances instance count by one step. """ self._model_config_parameters['instance_count'] += 1 def _step_dynamic_batching(self): """ Advances the dynamic batching by one step. """ if 'dynamic_batching' not in self._model_config_parameters: # Enable dynamic batching self._model_config_parameters['dynamic_batching'] = None else: if self._model_config_parameters['dynamic_batching'] is None: self._model_config_parameters['dynamic_batching'] = 1 else: self._model_config_parameters['dynamic_batching'] *= 2 def _get_throughput(self, measurement): return measurement.get_metric_value('perf_throughput') def _calculate_throughput_gain(self, index): throughput_before = self._get_throughput( self._measurements[-(index + 1)]) throughput_after = self._get_throughput(self._measurements[-index]) gain = (throughput_after - throughput_before) / throughput_before return gain def _valid_throughput_gain(self): """ Returns true if the amount of throughput gained is reasonable for continuing the search process """ # If number of measurements is smaller than 4, # the search can continue. if len(self._measurements) < 4: return True return self._calculate_throughput_gain(1) > THROUGHPUT_GAIN or \ self._calculate_throughput_gain(2) > THROUGHPUT_GAIN or \ self._calculate_throughput_gain(3) > THROUGHPUT_GAIN def init_model_sweep(self, concurrency, search_model_config_parameters): """ Intiliazes the sweep mode, and model config parameters in some cases. """ # Reset the measurements after each init self._measurements = [] if len(concurrency) != 0 and search_model_config_parameters: self._model_config_parameters = {'instance_count': 0} self._sweep_mode_function = self._sweep_model_config_only elif len(concurrency) == 0 and search_model_config_parameters: self._model_config_parameters = {'instance_count': 1} logger.info( 'Will sweep both the concurrency and model config parameters...' ) self._sweep_mode_function = self._sweep_concurrency_and_model_config else: logger.info('Will sweep only through the concurrency values...') self._sweep_mode_function = self._sweep_concurrency_only def get_model_sweep(self, config_model): """ Get the next iteration of the sweeps. Parameters ---------- config_model : ConfigModelProfileSpec The config model object of the model to sweep through Returns ------- config_model, list The list may be empty, contain a model config dict or None """ new_model = ConfigModelProfileSpec( copy.deepcopy(config_model.model_name()), copy.deepcopy(config_model.cpu_only()), copy.deepcopy(config_model.objectives()), copy.deepcopy(config_model.constraints()), copy.deepcopy(config_model.parameters()), copy.deepcopy(config_model.model_config_parameters()), copy.deepcopy(config_model.perf_analyzer_flags())) if self._sweep_mode_function: new_model, model_sweep = self._sweep_mode_function(new_model) # Only log message if there is new runs. if model_sweep: self._log_message(new_model) return new_model, model_sweep return new_model, [] def _sweep_concurrency_and_model_config(self, model): """ Gets next iteration of both the concurrency and model config parameters Parameters ---------- model : ConfigModelProfileSpec The model whose parameters are being swept over """ return self._sweep_parameters(model, sweep_model_configs=True) def _sweep_concurrency_only(self, model): """ Gets next iteration of the concurrency sweep """ return self._sweep_parameters(model, sweep_model_configs=False) def _sweep_parameters(self, model, sweep_model_configs): """ A helper function that sweeps over concurrency and if required, over model configs as well """ concurrency = model.parameters()['concurrency'] if len(concurrency) == 0: model.parameters()['concurrency'] = [1] else: # Exponentially increase concurrency new_concurrency = concurrency[0] * 2 # If the concurrency limit has been reached, the last batch lead to # an error, or the throughput gain is not significant, step # the concurrency value. TODO: add exponential backoff so # that the algorithm can step back and exactly find the points. concurrency_limit_reached = new_concurrency > self._max_concurrency last_batch_erroneous = self._last_batch_length == 0 throughput_peaked = not self._valid_throughput_gain() if concurrency_limit_reached or last_batch_erroneous or throughput_peaked: # Reset concurrency if sweep_model_configs: self._measurements = [] model.parameters()['concurrency'] = [1] return self._sweep_model_config_only(model) else: return model, [] model.parameters()['concurrency'] = [new_concurrency] return model, [ self._create_model_config( cpu_only=model.cpu_only()) if sweep_model_configs else None ] def _sweep_model_config_only(self, model): """ Gets next iteration model config parameters sweep """ self._step_instance_count() instance_limit_reached = self._model_config_parameters[ 'instance_count'] > self._max_instance_count if instance_limit_reached: if self._sweep_preferred_batch_size_disable: return model, [] # Reset instance_count self._model_config_parameters['instance_count'] = 1 self._step_dynamic_batching() dynamic_batching_enabled = self._model_config_parameters[ 'dynamic_batching'] is not None if dynamic_batching_enabled: batch_size_limit_reached = self._model_config_parameters[ 'dynamic_batching'] > self._max_preferred_batch_size if batch_size_limit_reached: return model, [] return model, [self._create_model_config(cpu_only=model.cpu_only())] def _log_message(self, model): """ Writes the current state of the search to the console """ concurrency = model.parameters()['concurrency'][0] message = 'dynamic batching is disabled.' if 'dynamic_batching' in self._model_config_parameters: if self._model_config_parameters['dynamic_batching'] is None: message = 'dynamic batching is enabled.' else: message = ( "preferred batch size is set to " f"{self._model_config_parameters['dynamic_batching']}.") if self._sweep_mode_function == self._sweep_concurrency_only: logger.info(f"[Search Step] Concurrency set to {concurrency}. ") elif self._sweep_mode_function == self._sweep_concurrency_and_model_config: logger.info( f"[Search Step] Concurrency set to {concurrency}. " f"Instance count set to " f"{self._model_config_parameters['instance_count']}, and {message}" ) elif self._sweep_mode_function == self._sweep_model_config_only: logger.info( f"[Search Step] Instance count set to " f"{self._model_config_parameters['instance_count']}, and {message}" )
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nibabies/workflows/brain_extraction.py
oesteban/nibabies
0
90097
# emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil -*- # vi: set ft=python sts=4 ts=4 sw=4 et: """Nipype translation of ANTs' workflows.""" import numpy as np # general purpose from pkg_resources import resource_filename as pkgr_fn # nipype from nipype.pipeline import engine as pe from nipype.interfaces import utility as niu from nipype.interfaces.ants import N4BiasFieldCorrection from nipype.interfaces.ants.utils import AI # niworkflows from niworkflows.anat.ants import init_atropos_wf, ATROPOS_MODELS from niworkflows.interfaces.ants import ImageMath from niworkflows.interfaces.images import RegridToZooms, ValidateImage from niworkflows.interfaces.nibabel import ApplyMask, Binarize from niworkflows.interfaces.fixes import ( FixHeaderRegistration as Registration, FixHeaderApplyTransforms as ApplyTransforms, ) from niworkflows.interfaces.registration import ( SimpleBeforeAfterRPT as SimpleBeforeAfter ) from templateflow.api import get as get_template from ..utils.filtering import ( gaussian_filter as _gauss_filter, truncation as _trunc ) HIRES_ZOOMS = (1, 1, 1) LOWRES_ZOOMS = (2, 2, 2) def init_infant_brain_extraction_wf( ants_affine_init=False, bspline_fitting_distance=200, debug=False, in_template="MNIInfant", template_specs=None, interim_checkpoints=True, mem_gb=3.0, mri_scheme="T2w", name="infant_brain_extraction_wf", atropos_model=None, omp_nthreads=None, output_dir=None, use_float=True, ): """ Build an atlas-based brain extraction pipeline for infant T2w MRI data. Parameters ---------- ants_affine_init : :obj:`bool`, optional Set-up a pre-initialization step with ``antsAI`` to account for mis-oriented images. """ inputnode = pe.Node( niu.IdentityInterface(fields=["in_files", "in_mask"]), name="inputnode" ) outputnode = pe.Node( niu.IdentityInterface(fields=["out_corrected", "out_brain", "out_mask"]), name="outputnode" ) template_specs = template_specs or {} # Find a suitable target template in TemplateFlow tpl_target_path = get_template( in_template, suffix=mri_scheme, **template_specs ) if not tpl_target_path: raise RuntimeError( f"An instance of template <tpl-{in_template}> with MR scheme '{mri_scheme}'" " could not be found.") # tpl_brainmask_path = get_template( # in_template, desc="brain", suffix="probseg", **template_specs # ) # if not tpl_brainmask_path: # ignore probseg for the time being tpl_brainmask_path = get_template( in_template, desc="brain", suffix="mask", **template_specs ) tpl_regmask_path = get_template( in_template, desc="BrainCerebellumExtraction", suffix="mask", **template_specs ) # validate images val_tmpl = pe.Node(ValidateImage(), name='val_tmpl') val_tmpl.inputs.in_file = _pop(tpl_target_path) val_target = pe.Node(ValidateImage(), name='val_target') # Resample both target and template to a controlled, isotropic resolution res_tmpl = pe.Node(RegridToZooms(zooms=HIRES_ZOOMS), name="res_tmpl") # testing res_target = pe.Node(RegridToZooms(zooms=HIRES_ZOOMS), name="res_target") # testing gauss_tmpl = pe.Node(niu.Function(function=_gauss_filter), name="gauss_tmpl") # Spatial normalization step lap_tmpl = pe.Node(ImageMath(operation="Laplacian", op2="0.4 1"), name="lap_tmpl") lap_target = pe.Node(ImageMath(operation="Laplacian", op2="0.4 1"), name="lap_target") # Merge image nodes mrg_target = pe.Node(niu.Merge(2), name="mrg_target") mrg_tmpl = pe.Node(niu.Merge(2), name="mrg_tmpl") norm_lap_tmpl = pe.Node(niu.Function(function=_trunc), name="norm_lap_tmpl") norm_lap_tmpl.inputs.dtype = "float32" norm_lap_tmpl.inputs.out_max = 1.0 norm_lap_tmpl.inputs.percentile = (0.01, 99.99) norm_lap_tmpl.inputs.clip_max = None norm_lap_target = pe.Node(niu.Function(function=_trunc), name="norm_lap_target") norm_lap_target.inputs.dtype = "float32" norm_lap_target.inputs.out_max = 1.0 norm_lap_target.inputs.percentile = (0.01, 99.99) norm_lap_target.inputs.clip_max = None # Set up initial spatial normalization ants_params = "testing" if debug else "precise" norm = pe.Node( Registration(from_file=pkgr_fn( "niworkflows.data", f"antsBrainExtraction_{ants_params}.json") ), name="norm", n_procs=omp_nthreads, mem_gb=mem_gb, ) norm.inputs.float = use_float # main workflow wf = pe.Workflow(name) # Create a buffer interface as a cache for the actual inputs to registration buffernode = pe.Node(niu.IdentityInterface( fields=["hires_target", "smooth_target"]), name="buffernode") # truncate target intensity for N4 correction clip_target = pe.Node( niu.Function(function=_trunc), name="clip_target", ) clip_tmpl = pe.Node( niu.Function(function=_trunc), name="clip_tmpl", ) #clip_tmpl.inputs.in_file = _pop(tpl_target_path) # INU correction of the target image init_n4 = pe.Node( N4BiasFieldCorrection( dimension=3, save_bias=False, copy_header=True, n_iterations=[50] * (4 - debug), convergence_threshold=1e-7, shrink_factor=4, bspline_fitting_distance=bspline_fitting_distance, ), n_procs=omp_nthreads, name="init_n4", ) clip_inu = pe.Node( niu.Function(function=_trunc), name="clip_inu", ) gauss_target = pe.Node(niu.Function(function=_gauss_filter), name="gauss_target") wf.connect([ # truncation, resampling, and initial N4 (inputnode, val_target, [(("in_files", _pop), "in_file")]), # (inputnode, res_target, [(("in_files", _pop), "in_file")]), (val_target, res_target, [("out_file", "in_file")]), (res_target, clip_target, [("out_file", "in_file")]), (val_tmpl, clip_tmpl, [("out_file", "in_file")]), (clip_tmpl, res_tmpl, [("out", "in_file")]), (clip_target, init_n4, [("out", "input_image")]), (init_n4, clip_inu, [("output_image", "in_file")]), (clip_inu, gauss_target, [("out", "in_file")]), (clip_inu, buffernode, [("out", "hires_target")]), (gauss_target, buffernode, [("out", "smooth_target")]), (res_tmpl, gauss_tmpl, [("out_file", "in_file")]), # (clip_tmpl, gauss_tmpl, [("out", "in_file")]), ]) # Graft a template registration-mask if present if tpl_regmask_path: hires_mask = pe.Node( ApplyTransforms( input_image=_pop(tpl_regmask_path), transforms="identity", interpolation="NearestNeighbor", float=True), name="hires_mask", mem_gb=1 ) wf.connect([ (res_tmpl, hires_mask, [("out_file", "reference_image")]), ]) map_brainmask = pe.Node( ApplyTransforms(interpolation="Gaussian", float=True), name="map_brainmask", mem_gb=1 ) map_brainmask.inputs.input_image = str(tpl_brainmask_path) thr_brainmask = pe.Node(Binarize(thresh_low=0.80), name="thr_brainmask") bspline_grid = pe.Node(niu.Function(function=_bspline_distance), name="bspline_grid") # Refine INU correction final_n4 = pe.Node( N4BiasFieldCorrection( dimension=3, save_bias=True, copy_header=True, n_iterations=[50] * 5, convergence_threshold=1e-7, rescale_intensities=True, shrink_factor=4, ), n_procs=omp_nthreads, name="final_n4", ) final_mask = pe.Node(ApplyMask(), name="final_mask") if atropos_model is None: atropos_model = tuple(ATROPOS_MODELS[mri_scheme].values()) atropos_wf = init_atropos_wf( use_random_seed=False, omp_nthreads=omp_nthreads, mem_gb=mem_gb, in_segmentation_model=atropos_model, ) # if tpl_regmask_path: # atropos_wf.get_node('inputnode').inputs.in_mask_dilated = tpl_regmask_path sel_wm = pe.Node(niu.Select(index=atropos_model[-1] - 1), name='sel_wm', run_without_submitting=True) wf.connect([ (inputnode, map_brainmask, [(("in_files", _pop), "reference_image")]), (inputnode, final_n4, [(("in_files", _pop), "input_image")]), (inputnode, bspline_grid, [(("in_files", _pop), "in_file")]), # (bspline_grid, final_n4, [("out", "bspline_fitting_distance")]), (bspline_grid, final_n4, [("out", "args")]), # merge laplacian and original images (buffernode, lap_target, [("smooth_target", "op1")]), (buffernode, mrg_target, [("hires_target", "in1")]), (lap_target, norm_lap_target, [("output_image", "in_file")]), (norm_lap_target, mrg_target, [("out", "in2")]), # Template massaging (res_tmpl, lap_tmpl, [("out_file", "op1")]), (res_tmpl, mrg_tmpl, [("out_file", "in1")]), (lap_tmpl, norm_lap_tmpl, [("output_image", "in_file")]), (norm_lap_tmpl, mrg_tmpl, [("out", "in2")]), # spatial normalization (mrg_target, norm, [("out", "moving_image")]), (mrg_tmpl, norm, [("out", "fixed_image")]), (norm, map_brainmask, [ ("reverse_transforms", "transforms"), ("reverse_invert_flags", "invert_transform_flags")]), (map_brainmask, thr_brainmask, [("output_image", "in_file")]), # take a second pass of N4 (map_brainmask, final_n4, [("output_image", "weight_image")]), (final_n4, final_mask, [("output_image", "in_file")]), (thr_brainmask, final_mask, [("out_mask", "in_mask")]), (final_n4, outputnode, [("output_image", "out_corrected")]), (thr_brainmask, outputnode, [("out_mask", "out_mask")]), (final_mask, outputnode, [("out_file", "out_brain")]), ]) # wf.disconnect([ # (get_brainmask, apply_mask, [('output_image', 'mask_file')]), # (copy_xform, outputnode, [('out_mask', 'out_mask')]), # ]) # wf.connect([ # (init_n4, atropos_wf, [ # ('output_image', 'inputnode.in_files')]), # intensity image # (thr_brainmask, atropos_wf, [ # ('out_mask', 'inputnode.in_mask')]), # (atropos_wf, sel_wm, [('outputnode.out_tpms', 'inlist')]), # (sel_wm, final_n4, [('out', 'weight_image')]), # ]) # wf.connect([ # (atropos_wf, outputnode, [ # ('outputnode.out_mask', 'out_mask'), # ('outputnode.out_segm', 'out_segm'), # ('outputnode.out_tpms', 'out_tpms')]), # ]) if tpl_regmask_path: wf.connect([ (hires_mask, norm, [ ("output_image", "fixed_image_masks")]), # (hires_mask, atropos_wf, [ # ("output_image", "inputnode.in_mask_dilated")]), ]) if interim_checkpoints: final_apply = pe.Node( ApplyTransforms( interpolation="BSpline", float=True), name="final_apply", mem_gb=1 ) final_report = pe.Node(SimpleBeforeAfter( before_label=f"tpl-{in_template}", after_label="target", out_report="final_report.svg"), name="final_report" ) wf.connect([ (inputnode, final_apply, [(("in_files", _pop), "reference_image")]), (res_tmpl, final_apply, [("out_file", "input_image")]), (norm, final_apply, [ ("reverse_transforms", "transforms"), ("reverse_invert_flags", "invert_transform_flags")]), (final_apply, final_report, [("output_image", "before")]), (outputnode, final_report, [("out_corrected", "after"), ("out_mask", "wm_seg")]), ]) if output_dir: from nipype.interfaces.io import DataSink ds_final_inu = pe.Node(DataSink(base_directory=str(output_dir.parent)), name="ds_final_inu") ds_final_msk = pe.Node(DataSink(base_directory=str(output_dir.parent)), name="ds_final_msk") ds_report = pe.Node(DataSink(base_directory=str(output_dir.parent)), name="ds_report") wf.connect([ (outputnode, ds_final_inu, [ ("out_corrected", f"{output_dir.name}.@inu_corrected")]), (outputnode, ds_final_msk, [ ("out_mask", f"{output_dir.name}.@brainmask")]), (final_report, ds_report, [ ("out_report", f"{output_dir.name}.@report")]), ]) if not ants_affine_init: return wf # Initialize transforms with antsAI lowres_tmpl = pe.Node(RegridToZooms(zooms=LOWRES_ZOOMS), name="lowres_tmpl") lowres_target = pe.Node(RegridToZooms(zooms=LOWRES_ZOOMS), name="lowres_target") init_aff = pe.Node( AI( metric=("Mattes", 32, "Regular", 0.25), transform=("Affine", 0.1), search_factor=(15, 0.1), principal_axes=False, convergence=(10, 1e-6, 10), search_grid=(40, (0, 40, 40)), verbose=True, ), name="init_aff", n_procs=omp_nthreads, ) wf.connect([ (gauss_tmpl, lowres_tmpl, [("out", "in_file")]), (lowres_tmpl, init_aff, [("out_file", "fixed_image")]), (gauss_target, lowres_target, [("out", "in_file")]), (lowres_target, init_aff, [("out_file", "moving_image")]), (init_aff, norm, [("output_transform", "initial_moving_transform")]), ]) if tpl_regmask_path: lowres_mask = pe.Node( ApplyTransforms( input_image=_pop(tpl_regmask_path), transforms="identity", interpolation="MultiLabel", float=True), name="lowres_mask", mem_gb=1 ) wf.connect([ (lowres_tmpl, lowres_mask, [("out_file", "reference_image")]), (lowres_mask, init_aff, [("output_image", "fixed_image_mask")]), ]) if interim_checkpoints: init_apply = pe.Node( ApplyTransforms( interpolation="BSpline", float=True), name="init_apply", mem_gb=1 ) init_report = pe.Node(SimpleBeforeAfter( before_label=f"tpl-{in_template}", after_label="target", out_report="init_report.svg"), name="init_report" ) wf.connect([ (lowres_target, init_apply, [("out_file", "input_image")]), (res_tmpl, init_apply, [("out_file", "reference_image")]), (init_aff, init_apply, [("output_transform", "transforms")]), (init_apply, init_report, [("output_image", "after")]), (res_tmpl, init_report, [("out_file", "before")]), ]) if output_dir: ds_init_report = pe.Node(DataSink(base_directory=str(output_dir.parent)), name="ds_init_report") wf.connect( init_report, "out_report", ds_init_report, f"{output_dir.name}.@init_report" ) return wf def _pop(in_files): if isinstance(in_files, (list, tuple)): return in_files[0] return in_files def _bspline_distance(in_file, spacings=(20, 20, 20)): import numpy as np import nibabel as nb img = nb.load(in_file) extent = (np.array(img.shape[:3]) - 1) * img.header.get_zooms()[:3] retval = [f"{v}" for v in np.ceil(extent / np.array(spacings)).astype(int)] return f"-b {'x'.join(retval)}"
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packages/w3af/w3af/core/controllers/tests/core_test_suite/test_exception_handler.py
ZooAtmosphereGroup/HelloPackages
3
92709
<gh_stars>1-10 """ test_exception_handling.py Copyright 2011 <NAME> This file is part of w3af, http://w3af.org/ . w3af is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation version 2 of the License. w3af is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with w3af; if not, write to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA """ from w3af.core.controllers.tests.core_test_suite.test_pause_stop import CountTestMixin class TestExceptionHandler(CountTestMixin): """ Inherit from TestW3afCorePause to get the nice setUp(). """ def test_same_id(self): """ Verify that the exception handler is the same before and after the scan """ before_id_ehandler = id(self.w3afcore.exception_handler) self.w3afcore.start() after_id_ehandler = id(self.w3afcore.exception_handler) self.assertEqual(before_id_ehandler, after_id_ehandler)
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imports.py
MarcusTL12/PyCalc
0
119831
import sys sys.path.append('./PyScr/') import numpy as np import matplotlib.pyplot as plt import cmath import math import copy import pfprint import primefac from scipy.special import comb as choose _ = None def ppprint(arg): global _ pfprint.pfprint(arg) _ = arg def frac(): pfprint.frac = not pfprint.frac return _ def denom_lim(n): pfprint.denom_lim = n def num_dec(n): pfprint.num_dec = n def pltclr(): plt.cla() plt.clf() plt.close() def fact(n): return math.factorial(n) def primesS(n): return primefac.primes_to_string(primefac.primes(n)) def primes(n): return primefac.primes(n) sys.displayhook = ppprint pi = np.pi e = np.exp(1) sqrt = np.sqrt predef_globals = len(globals()) + 1 def loc(): return dict(list(globals().items())[predef_globals:])
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trompace/mutations/__init__.py
trompamusic/ce-queries-template
1
8306
MUTATION = '''mutation {{ {mutation} }}''' def _verify_additional_type(additionaltype): """Check that the input to additionaltype is a list of strings. If it is empty, raise ValueError If it is a string, convert it to a list of strings.""" if additionaltype is None: return None if isinstance(additionaltype, str): additionaltype = [additionaltype] if len(additionaltype) == 0: raise ValueError("additionaltype must be a non-empty list") return additionaltype
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nodux_stock_one/config/nodux_stock_one.py
tatiqm25/nodux_stock_one
0
89714
from __future__ import unicode_literals from frappe import _ def get_data(): return [ { "label": _("Reporte Stock"), "icon": "fa fa-star", "items": [ { "type": "report", "name": "Stock", "doctype": "Stock One", "is_query_report": True } ] } ]
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ai_haste/loss/log_squared_loss.py
aidotse/Team-Haste
0
107857
<reponame>aidotse/Team-Haste import torch import torch.nn as nn import torch.nn.functional as F class LogSquaredLoss(nn.Module): def __init__(self,): super(LogSquaredLoss, self).__init__() self.l1 = nn.L1Loss() self.eps = 1e-8 def forward(self, output, target): # output = torch.log((output) + self.eps) # target = torch.log((target) + self.eps) # loss = self.l1(target, output) loss = torch.log(torch.div(((target) + self.eps), ((output) + self.eps))) loss = (loss ** 2).mean() return loss
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pymf6/tests/test_bool.py
hydrocomputing/pymf6
4
171382
#!/usr/bin/env python """Simple callback test """ from pymf6.callback import Func from pymf6 import mf6 class MyFunc(Func): # pylint: disable=too-few-public-methods """ Callback """ def __init__(self, stop=2, verbose=False): super().__init__(verbose=verbose) self.stop = stop def __call__(self): super().__call__() print(f'>>> Python: Called {self.counter} times') if self.counter >= self.stop: print(f'Stopping from Python after {self.stop} time steps.') self.set_value('ENDOFSIMULATION', 'TDIS', True) if __name__ == '__main__': mf6.mf6_sub(MyFunc(verbose=True))
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src/main/resources/pytz/zoneinfo/America/Panama.py
TheEin/swagger-maven-plugin
65
60898
'''tzinfo timezone information for America/Panama.''' from pytz.tzinfo import DstTzInfo from pytz.tzinfo import memorized_datetime as d from pytz.tzinfo import memorized_ttinfo as i class Panama(DstTzInfo): '''America/Panama timezone definition. See datetime.tzinfo for details''' zone = 'America/Panama' _utc_transition_times = [ d(1,1,1,0,0,0), d(1908,4,22,5,19,36), ] _transition_info = [ i(-19200,0,'CMT'), i(-18000,0,'EST'), ] Panama = Panama()
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python/generated/swaggeraem/apis/__init__.py
mbloch1986/swagger-aem
0
104970
from __future__ import absolute_import # import apis into api package from .console_api import ConsoleApi from .cq_api import CqApi from .crx_api import CrxApi from .custom_api import CustomApi from .sling_api import SlingApi
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setup.py
edyatl/passchek
5
163446
#!/usr/bin/env python3 import setuptools from passchek.passchek import __version__ with open("README.md", "r") as fh: long_description = fh.read() setuptools.setup( name="passchek", version=__version__, license="MIT", author="<NAME>", author_email="<EMAIL>", description="Passchek is a simple cli tool, checks if your password has been compromised.", long_description=long_description, long_description_content_type="text/markdown", url="https://github.com/edyatl/passchek", packages=setuptools.find_packages(), include_package_data=True, entry_points={ "console_scripts": [ "passchek=passchek.passchek:main", ] }, keywords=[ "passchek", "password", "pwned", "troyhunt", "github", "k-anonymity", "interactive", "console", "sha1", "pwnedpassword", "versions", "virtualenv" ], classifiers=[ "Programming Language :: Python :: 3", "Programming Language :: Python :: 3.5", "Programming Language :: Python :: 3.6", "Environment :: Console", "License :: OSI Approved :: MIT License", "Operating System :: POSIX", "Intended Audience :: End Users/Desktop", "Topic :: Utilities", ], python_requires='>=3.5', )
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conftest.py
Casecommons/sentry
0
1608557
<gh_stars>0 from django.conf import settings import mock import os import os.path def pytest_configure(config): import warnings warnings.filterwarnings('error', '', Warning, r'(sentry|raven)') if not settings.configured: os.environ['DJANGO_SETTINGS_MODULE'] = 'sentry.conf.server' test_db = os.environ.get('DB', 'sqlite') if test_db == 'mysql': settings.DATABASES['default'].update({ 'ENGINE': 'django.db.backends.mysql', 'NAME': 'sentry', 'USER': 'root', }) elif test_db == 'postgres': settings.DATABASES['default'].update({ 'ENGINE': 'django.db.backends.postgresql_psycopg2', 'USER': 'postgres', 'NAME': 'sentry', 'OPTIONS': { 'autocommit': True, } }) elif test_db == 'sqlite': settings.DATABASES['default'].update({ 'ENGINE': 'django.db.backends.sqlite3', 'NAME': ':memory:', }) # http://djangosnippets.org/snippets/646/ class InvalidVarException(object): def __mod__(self, missing): try: missing_str = unicode(missing) except: missing_str = 'Failed to create string representation' raise Exception('Unknown template variable %r %s' % (missing, missing_str)) def __contains__(self, search): if search == '%s': return True return False settings.TEMPLATE_DEBUG = True # settings.TEMPLATE_STRING_IF_INVALID = InvalidVarException() # Disable static compiling in tests settings.STATIC_BUNDLES = {} # override a few things with our test specifics settings.INSTALLED_APPS = tuple(settings.INSTALLED_APPS) + ( 'tests', ) # Need a predictable key for tests that involve checking signatures settings.SENTRY_KEY = 'abc123' settings.SENTRY_PUBLIC = False # This speeds up the tests considerably, pbkdf2 is by design, slow. settings.PASSWORD_HASHERS = [ 'django.contrib.auth.hashers.MD5PasswordHasher', ] # enable draft features settings.SENTRY_ENABLE_EXPLORE_CODE = True settings.SENTRY_ENABLE_EXPLORE_USERS = True settings.SENTRY_ENABLE_EMAIL_REPLIES = True settings.SENTRY_ALLOW_ORIGIN = '*' # django mail uses socket.getfqdn which doesnt play nice if our # networking isnt stable patcher = mock.patch('socket.getfqdn', return_value='localhost') patcher.start() from sentry.utils.runner import initialize_receivers initialize_receivers()
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tensorflow_hub/saved_model_module.py
hrishikeshmane/hub
2
1615221
# Copyright 2018 The TensorFlow Hub Authors. All Rights Reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License. # ============================================================================== """Implementation of deprecated hub.Module that loads raw TF1 SavedModels.""" from __future__ import absolute_import from __future__ import division from __future__ import print_function from tensorflow_hub import native_module from tensorflow_hub import saved_model_lib from tensorflow_hub import tf_v1 _ALWAYS_DROPPED_COLLECTIONS = [ # SavedModels exported from estimator framework typically contain a # collection with the variable that holds the global training step. # # This collection is ignored when loading it as a module. However the # variable that contains the step would still be brought in if declared # in the VARIABLES collection. tf_v1.GraphKeys.GLOBAL_STEP, # SavedModels exported for serving use cases contain collections which refer # to ops in the graph that when run are responsible to initialize the # session for subsequent signature executions. # # This generic initialization definition is impossible to support for many # hub use cases and therefore the assumption here is that the SavedModel # init op can be ignored in favor of initializing using the # tf.train.MonitoredSession mechanisms + construction of a new tf.Saver() # from the global variables collection. tf_v1.saved_model.constants.LEGACY_INIT_OP_KEY, tf_v1.saved_model.constants.MAIN_OP_KEY, ] def _drop_collections(saved_model_handler, collections): for meta_graph in saved_model_handler.meta_graphs: for collection in collections: if collection in meta_graph.collection_def: del meta_graph.collection_def[collection] def create_module_spec_from_saved_model(saved_model_path, drop_collections=None): """Experimental: Create a ModuleSpec out of a SavedModel from TF1. DEPRECATION NOTE: This belongs to the hub.Module API and file format for TF1. For TF2, TensorFlow Hub ships plain SavedModels, removing the need for conversions like this. Define a ModuleSpec from a SavedModel. Note that this is not guaranteed to work in all cases and it assumes the SavedModel has followed some conventions: - The serialized SaverDef can be ignored and instead can be reconstructed. - The init op and main op can be ignored and instead the module can be initialized by using the conventions followed by `tf.train.MonitoredSession`. Note that the set of features supported can increase over time and have side effects that were not previously visible. The pattern followed to avoid surprises is forcing users to declare which features to ignore (even if they are not supported). Note that this function creates a ModuleSpec that when exported exports a Module (based on a modified copy of the original SavedModel) and not a SavedModel. Args: saved_model_path: Directory with the SavedModel to use. drop_collections: Additionally list of collection to drop. Returns: A ModuleSpec. """ saved_model_handler = saved_model_lib.load(saved_model_path) checkpoint_filename = saved_model_lib.get_variables_path(saved_model_path) drop_collections = (set(_ALWAYS_DROPPED_COLLECTIONS) | (set(drop_collections) if drop_collections else set())) _drop_collections(saved_model_handler, drop_collections) return native_module._ModuleSpec(saved_model_handler, checkpoint_filename) # pylint: disable=protected-access
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modules/sensor_heatmap/controllers.py
srcc-msu/job_statistics
0
122799
from flask import Blueprint, render_template, current_app, Response from application.database import global_db from application.helpers import requires_auth from core.monitoring.models import SENSOR_CLASS_MAP sensor_heatmap_pages = Blueprint('sensor_heatmap', __name__ , template_folder='templates', static_folder='static') import time def __heatmap(): cpu = SENSOR_CLASS_MAP["cpu_user"] gpu = SENSOR_CLASS_MAP["gpu_load"] interval = current_app.app_config.monitoring["aggregation_interval"] time_thr = int(time.time() - interval * 3) cpu_data = list(global_db.session.query(cpu.node_id, cpu.avg) .filter(cpu.time > time_thr) .order_by("time desc").all()) gpu_data = list(global_db.session.query(gpu.node_id, gpu.avg) .filter(gpu.time > time_thr) .order_by("time desc").all()) return render_template("cpu.html", cpu_data = cpu_data, gpu_data = gpu_data) @sensor_heatmap_pages.route("/general") @requires_auth def heatmap() -> Response: return __heatmap()
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python_test.py
jackKiZhu/mypython
0
8114
<gh_stars>0 from flask import Flask, render_template, request from flask_sqlalchemy import SQLAlchemy app = Flask(__name__) app.config["SQLALCHEMY_DATABASE_URI"] = "mysql://root:[email protected]:3306/python_github" app.config["SQLALCHEMY_TRACK_MODIFICATIONS"] = True db = SQLAlchemy(app) class User(db.Model): id = db.Column(db.Integer, primary_key=True) user_name = db.Column(db.String(64), unique=True) user_password = db.Column(db.String(32)) def __repr__(self): return "用户id:%s 用户名:%s" % (self.id, self.user_name) @app.route("/", methods=["post", "get"]) def index(): index_meg = "" if request.method == "POST": user_name = request.form.get("user_name", "") user_pwd = request.form.get("user_pwd", "") if not all([user_name, user_pwd]): index_meg = "请正确输入信息" else: print(request.get_data()) user_name_is_exits = User.query.filter(User.user_name == user_name).first() if user_name_is_exits: index_meg = "用户名已存在" else: user_obj = User(user_name=user_name, user_password=<PASSWORD>) db.session.add(user_obj) db.session.commit() index_meg = "注册成功" print("注册成功") # user_name = request.args.get("user_name", "") # user_pwd = request.args.get("user_pwd", "") # user_is_login = User.query.filter_by(user_name=user_name, user_password=<PASSWORD>).first() # if user_is_login: # index_meg = "登陆成功" # print("登陆成功") # return render_template("login_ok.html", index_meg=index_meg) # else: # # index_meg = "登陆失败" # print("登陆失败") return render_template("index.html", index_meg=index_meg) if __name__ == "__main__": db.drop_all() db.create_all() app.run(debug=True)
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tests.py
HeyIamJames/CarCompare
0
137833
<gh_stars>0 import unittest from selenium import webdriver from selenium.webdriver.common.keys import Keys class PythonOrgSearch(unittest.TestCase): def setUp(self): self.driver = webdriver.Chrome() def test_search_in_python_org(self): driver = self.driver("/chromedriver.exe" self.assertIn("none", driver.title) elem.send_keys("Ads") elem.send_keys(Keys.RETURN) def tearDown(self): self.driver.close() if __name__ == "__main__": unittest.main()
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Audio_CrisNet_spec_mel_log.py
BioSIP/countcrowd_TFG
0
71797
<filename>Audio_CrisNet_spec_mel_log.py<gh_stars>0 from losses import LogCoshLoss import os from scipy.io import loadmat from torch.utils.data import DataLoader from torch.utils.data import Dataset import torch import torchaudio import torch.nn as nn from torch import optim import torch.nn.functional as F import numpy as np from torch.optim.lr_scheduler import StepLR import pickle # https://pytorch.org/tutorials/beginner/audio_preprocessing_tutorial.html # Para comprobar si tenemos GPUs disponibles para usar o no: use_cuda = torch.cuda.is_available() device = torch.device("cuda" if use_cuda else "cpu") SAVE_FILENAME = 'crisnet_melspectrogram_mselog.pickle' class AudioDataset(Dataset): def __init__(self, audio_path, density_path, transform=None): # 3 opciones para el density_path: #density_path = '/Volumes/Cristina /TFG/Data/density/train' #density_path = '/Volumes/Cristina /TFG/Data/density/test' #density_path = '/Volumes/Cristina /TFG/Data/density/val' self.density_path = density_path self.audio_path = audio_path self.transform = transform self.mapfiles = os.listdir(self.density_path) # Para no incluir los archivos con '._': self.mapfiles = [ el for el in self.mapfiles if el.startswith('._') == False] self.mapfiles_wo_ext = [el[:-4] for el in self.mapfiles] # list comprehension #audio_path = '/Volumes/Cristina /TFG/Data/auds/' self.audiofiles = os.listdir(audio_path) self.audiofiles_wo_ext = [el[:-4] for el in self.audiofiles] self.audiofiles = [ el + '.wav' for el in self.audiofiles_wo_ext if el in self.mapfiles_wo_ext] self.audiofiles = sorted(self.audiofiles) self.mapfiles = sorted(self.mapfiles) # Añadir extensiones a archivos de audio: # for i in range(len(self.audiofiles)): # Añado la extensión al nombre del archivo que quiero importar: #self.audiofiles[i] = [self.audiofiles[i] + '.wav'] def __len__(self): return len(self.audiofiles) def __getitem__(self, idx): # DENSITY MAP map_path = self.density_path + self.mapfiles[idx] mapa = loadmat(map_path) y = torch.as_tensor(mapa['map'].sum(), dtype=torch.float32) # AUDIO # Encuentro el path del archivo: filename = str(self.audiofiles[idx]) filename = filename.lstrip("['") filename = filename.rstrip("']") aud_path = self.audio_path + filename # Cargamos el audio: waveform, sample_rate = torchaudio.load( aud_path) # waveform es un tensor x = waveform.view((2, 1, -1)) # dimensiones if self.transform: x = self.transform(x) return x, y class MelSpectrogramDataset(Dataset): def __init__(self, audio_path, density_path, transform=None): #3 opciones para el density_path: #density_path = '/Volumes/Cristina /TFG/Data/density/train' #density_path = '/Volumes/Cristina /TFG/Data/density/test' #density_path = '/Volumes/Cristina /TFG/Data/density/val' self.density_path=density_path self.audio_path=audio_path self.transform=transform self.mapfiles = os.listdir(self.density_path) #Para no incluir los archivos con '._': self.mapfiles = [el for el in self.mapfiles if el.startswith('._')==False] self.mapfiles_wo_ext=[el[:-4] for el in self.mapfiles] # list comprehension #audio_path = '/Volumes/Cristina /TFG/Data/auds/' self.audiofiles = os.listdir(audio_path) self.audiofiles_wo_ext=[el[:-4] for el in self.audiofiles] self.audiofiles = [el + '.wav' for el in self.audiofiles_wo_ext if el in self.mapfiles_wo_ext] self.audiofiles = sorted(self.audiofiles) self.mapfiles = sorted(self.mapfiles) #Anadir extensiones a archivos de audio: #for i in range(len(self.audiofiles)): #Anado la extension al nombre del archivo que quiero importar: #self.audiofiles[i] = [self.audiofiles[i] + '.wav'] def __len__(self): return len(self.audiofiles) def __getitem__(self, idx): #DENSITY MAP map_path = self.density_path + self.mapfiles[idx] mapa = loadmat(map_path) y = torch.as_tensor(mapa['map'].sum(), dtype=torch.float32) #AUDIO #Encuentro el path del archivo: filename=str(self.audiofiles[idx]) filename=filename.lstrip("['") filename=filename.rstrip("']") aud_path = self.audio_path + filename #Cargamos el audio: waveform, sample_rate = torchaudio.load(aud_path) #waveform es un tensor spec = torchaudio.transforms.Spectrogram()(waveform) x = torchaudio.transforms.MelScale(n_mels = 201, sample_rate = sample_rate)(spec) #print("Shape of spectrogram: {}".format(x.size())) #plt.figure() #plt.imshow(x.log2()[0,:,:].numpy(), cmap='gray') return x, y ''' audio_path = '/home/pakitochus/Descargas/propuestas_tfg_cristina/crowd/definitivo/DISCO_dataset/auds/' train_density_path = '/home/pakitochus/Descargas/propuestas_tfg_cristina/crowd/definitivo/DISCO_dataset/density/train/' val_density_path = '/home/pakitochus/Descargas/propuestas_tfg_cristina/crowd/definitivo/DISCO_dataset/density/val/' test_density_path = '/home/pakitochus/Descargas/propuestas_tfg_cristina/crowd/definitivo/DISCO_dataset/density/test/' ''' audio_path = '/media/NAS/home/cristfg/datasets/auds/' train_density_path = '/media/NAS/home/cristfg/datasets/density/train/' val_density_path = '/media/NAS/home/cristfg/datasets/density/val/' test_density_path = '/media/NAS/home/cristfg/datasets/density/test/' trainset = MelSpectrogramDataset(audio_path, train_density_path,'MEL') valset = MelSpectrogramDataset(audio_path, val_density_path,'MEL') testset = MelSpectrogramDataset(audio_path, test_density_path,'MEL') # PRUEBA para ver tensores de audio y de mapas de los conjuntos de train y val: # print(trainset.__getitem__(20)) # print(valset.__getitem__(20)) #BATCH_SIZE: pequeño (1-3) batch_size = 48 # BATCH_SIZE: pequeño (1-3) train_loader = DataLoader(trainset, batch_size, shuffle=True) val_loader = DataLoader(valset, 32, shuffle=False) test_loader = DataLoader(testset, 32, shuffle=False) # RED: ''' #Por si quiero probar luego con LeNet (CAMBIAR INPUTS!): class LeNet(nn.Module): def __init__(self): super(LeNet, self).__init__() # esta linea es siempre necesaria self.conv1 = nn.Conv2d(1, 6, 5, padding=2) self.mp1 = nn.MaxPool2d(1,2) self.conv2 = nn.Conv2d(6, 16, 5, padding=2) self.mp2 = nn.MaxPool2d(2) self.conv3 = nn.Conv2d(16, 120, 3, padding=1) self.fc1 = nn.Linear(7*7*120, 256)#capa oculta self.fc2 = nn.Linear(256, 10)#capa de salida def forward(self, x): x = F.relu(self.conv1(x)) x = self.mp1(x) x = F.relu(self.conv2(x)) x = self.mp2(x) x = F.relu(self.conv3(x)) x = x.view(-1, 7*7*120) x = F.relu(self.fc1(x))#Función de activación relu en la salida de la capa oculta x = F.softmax(self.fc2(x), dim=1)#Función de activación softmax en la salida de la capa oculta return x ''' # MaxPool2d((1,2)) # torch.nn.Conv2d(in_channels, out_channels, kernel_size) -> kernel_size = (1, 61) # in_channels ->2, out_channels -> [32,64]. # optim - > adam class GlobalAvgPool2d(nn.Module): def __init__(self): super(GlobalAvgPool2d, self).__init__() def forward(self, x): assert len(x.size()) == 4, x.size() B, C, W, H = x.size() return F.avg_pool2d(x, (W, H)).view(B, C) class GlobalMaxPool2d(nn.Module): def __init__(self): super(GlobalMaxPool2d, self).__init__() def forward(self, x): assert len(x.size()) == 4, x.size() B, C, W, H = x.size() return F.max_pool2d(x, (W, H)).view(B, C) class VGGish(nn.Module): """ PyTorch implementation of the VGGish model. Adapted from: https://github.com/harritaylor/torch-vggish The following modifications were made: (i) correction for the missing ReLU layers, (ii) correction for the improperly formatted data when transitioning from NHWC --> NCHW in the fully-connected layers, and (iii) correction for flattening in the fully-connected layers. """ def __init__(self): super(VGGish, self).__init__() self.pools = [4, 4, 2, 2] self.features = nn.Sequential( nn.Conv2d(2, 64, 3, stride=(1, self.pools[0]), padding=3), nn.ReLU(), nn.Conv2d(64, 128, 5, stride=(1, self.pools[1]), padding=2), nn.ReLU(), nn.Conv2d(128, 256, 3, stride=1, padding=1), nn.ReLU(), nn.Conv2d(256, 256, 3, stride=(1, self.pools[2]), padding=1), nn.ReLU(), nn.Conv2d(256, 512, 3, stride=1, padding=1), nn.ReLU(), nn.Conv2d(512, 1024, 3, stride=1, padding=1), nn.ReLU(), # nn.MaxPool2d((1,self.pools[3]), stride=self.pools[3]) ) self.avgpool = GlobalAvgPool2d() self.fc = nn.Sequential( nn.Linear(1024, 4096), nn.Linear(4096, 1) ) # así y todo se nos queda en 1572864000 def forward(self, x): x = self.features(x) # .permute(0, 2, 3, 1).contiguous() x = self.avgpool(x) # x = x.view(x.size(0), -1) x = self.fc(x) # b, c, w, h = x.shape # x = x.view(b, c, -1).mean(-1) return x class CrisNet(nn.Module): def __init__(self): super(CrisNet, self).__init__() # esta linea es siempre necesaria self.max_pool1 = nn.MaxPool2d((1,2)) self.max_pool2 = nn.MaxPool2d((1,2)) self.max_pool3 = nn.MaxPool2d((1,2)) self.max_pool4 = nn.MaxPool2d((1,2)) self.max_pool5 = nn.MaxPool2d((1,2)) self.max_pool6 = nn.MaxPool2d((1,2)) self.conv1 = nn.Conv2d(2, 32, 3, stride=1, padding=1) self.conv2 = nn.Conv2d(32, 64, 3, stride=1, padding=1) self.conv3 = nn.Conv2d(64, 128, 3, stride=1, padding=1) self.conv4 = nn.Conv2d(128, 256, 3, stride=1, padding=1) self.conv5 = nn.Conv2d(256, 512, 3, stride=1, padding=1) self.conv6 = nn.Conv2d(512, 1024, 3, stride=1, padding=1) self.fc1 = nn.Linear(617472,1) def forward(self, x): #Con función de activación ReLu #PRIMERA CAPA x = F.relu(self.conv1(x)) x = self.max_pool1(x) #SEGUNDA CAPA x = F.relu(self.conv2(x)) x = self.max_pool2(x) #TERCERA CAPA x = F.relu(self.conv3(x)) x = self.max_pool3(x) #CUARTA CAPA x = F.relu(self.conv4(x)) x = self.max_pool4(x) #QUINTA CAPA x = F.relu(self.conv5(x)) x = self.max_pool5(x) #SEXTA CAPA x = F.relu(self.conv6(x)) x = self.max_pool6(x) x = x.view((x.size(0),-1)) #print(x.size()) x = self.fc1(x) return x modelo=CrisNet() modelo = modelo.to(device) criterion = nn.MSELoss() # definimos la pérdida # criterion = LogCoshLoss(reduction='sum') optimizador = optim.Adam(modelo.parameters(), lr=1e-3)#, weight_decay=1e-4) # optimizador = optim.SGD(modelo.parameters(), lr=1e-4) # print(modelo) # print(train_loader) # print(type(train_loader)) # print(x) # print(x.size()) # print(y) # print(y.size()) def get_mae_mse(ypred, y, transform): mse_loss = 0.0 mae_loss = 0.0 total = 0 ypred, y = transform(ypred.data), transform(y.data) for ix in range(y.shape[0]): total += 1 mae_loss += abs(ypred[ix] - y[ix]) mse_loss += (ypred[ix] - y[ix])*(ypred[ix] - y[ix]) return mae_loss/total, torch.sqrt(mse_loss/total) # Para predecir y, la normalizaremos. Siempre por el mismo valor: Y_NORM = 10 losses = {'train': list(), 'validacion': list()} min_val_loss = {'mae': float('Inf'), 'mse': float('Inf'), 'loss': float('Inf') } expcode = 'cris_melspectrogram_mselog' def transform(x): return torch.log(x/Y_NORM) def inverse_transform(x): return Y_NORM*torch.exp(torch.as_tensor(x)) for epoch in range(100): print("Entrenando... \n") # Esta será la parte de entrenamiento training_loss = 0.0 # el loss en cada epoch de entrenamiento total = 0 modelo.train() # Para preparar el modelo para el training for x, y in train_loader: total += 1 # ponemos a cero todos los gradientes en todas las neuronas: optimizador.zero_grad() y = transform(y) # normalizamos x = x.to(device) y = y.to(device) output = modelo(x) # forward loss = criterion(output.squeeze(), y.squeeze()) # evaluación del loss # print(f'loss: {loss:.4f}') loss.backward() # backward pass optimizador.step() # optimización training_loss += loss.item() # acumulamos el loss de este batch training_loss = training_loss/total losses['train'].append(training_loss) # .item()) val_loss = 0.0 mae, mse = 0,0 total = 0 modelo.eval() # Preparar el modelo para validación y/o test print("Validando... \n") for x, y in val_loader: total += 1 y = transform(y) # normalizamos x = x.to(device) y = y.to(device) output = modelo(x) loss = criterion(output.squeeze(), y.squeeze()) val_loss += loss.item() mae_accum, mse_accum = get_mae_mse(output.squeeze(), y.squeeze(), inverse_transform) mae += mae_accum mse += mse_accum val_loss = val_loss/total mae = mae/total mse = mse/total losses['validacion'].append(val_loss) # .item()) print(f'[ep {epoch}] [Train: {training_loss:.4f}][Val: {val_loss:.4f}]') print(f'\t[Val MAE: {mae:.4f}][Val MSE: {mse:.4f}]') # Early stopping if (val_loss <= min_val_loss['loss']) or (mse <= min_val_loss['mse']) or (mae<=min_val_loss['mae']): filename = expcode+'.pt' print(f'Saving as {filename}') torch.save(modelo, filename) if val_loss <= min_val_loss['loss']: min_val_loss['loss'] = val_loss if mse <= min_val_loss['mse']: min_val_loss['mse'] = mse if mae<=min_val_loss['mae']: min_val_loss['mae'] = mae last_epoch = epoch # last_lr = scheduler.get_last_lr() # ENTRENAMIENTO n_epochs = 500 LR_DECAY = 0.99 NUM_EPOCH_LR_DECAY = 1 modelo = torch.load(filename) optimizador = optim.SGD(modelo.parameters(), lr=1e-4, momentum=0.9) scheduler = StepLR(optimizador, step_size=NUM_EPOCH_LR_DECAY, gamma=LR_DECAY) epoch_ni = 0 # epochs not improving. MAX_ITER = 100 for epoch in range(last_epoch, n_epochs): print("Entrenando... \n") # Esta será la parte de entrenamiento training_loss = 0.0 # el loss en cada epoch de entrenamiento total = 0 modelo.train() # Para preparar el modelo para el training for x, y in train_loader: total += 1 # ponemos a cero todos los gradientes en todas las neuronas: optimizador.zero_grad() y = transform(y) # normalizamos x = x.to(device) y = y.to(device) output = modelo(x) # forward loss = criterion(output.squeeze(), y.squeeze()) # evaluación del loss # print(f'loss: {loss}') loss.backward() # backward pass optimizador.step() # optimización training_loss += loss.item() # acumulamos el loss de este batch training_loss = training_loss/total losses['train'].append(training_loss) # .item()) val_loss = 0.0 total = 0 mae, mse = 0,0 scheduler.step() # rebaja un poco la LR del SGD modelo.eval() # Preparar el modelo para validación y/o test print("Validando... \n") for x, y in val_loader: total += 1 y = transform(y) # normalizamos x = x.to(device) y = y.to(device) output = modelo(x) # forward loss = criterion(output.squeeze(), y.squeeze()) mae_accum, mse_accum = get_mae_mse(output.squeeze(), y.squeeze(), inverse_transform) mae += mae_accum mse += mse_accum val_loss = val_loss/total mae = mae/total mse = mse/total losses['validacion'].append(val_loss) # .item()) print(f'[ep {epoch}] [Train: {training_loss:.4f}][Val: {val_loss:.4f}]') print(f'\t[Val MAE: {mae:.4f}][Val MSE: {mse:.4f}]') # Early stopping if (val_loss <= min_val_loss['loss']) or (mse <= min_val_loss['mse']) or (mae<=min_val_loss['mae']): filename = expcode+'.pt' print(f'Saving as {filename}') torch.save(modelo, filename) if val_loss <= min_val_loss['loss']: min_val_loss['loss'] = val_loss if mse <= min_val_loss['mse']: min_val_loss['mse'] = mse if mae<=min_val_loss['mae']: min_val_loss['mae'] = mae # TEST modelo = torch.load(filename) modelo.eval() # Preparar el modelo para validación y/o test print("Testing... \n") total = 0 test_loss_mse = 0.0 test_loss_mae = 0.0 yreal = list() ypredicha = list() for x, y in test_loader: y = transform(y) # normalizamos x = x.to(device) y = y.to(device) with torch.no_grad(): output = modelo(x) yreal.append(inverse_transform(y.data.cpu().numpy())) ypredicha.append(inverse_transform(output.data.cpu().numpy())) mae_accum, mse_accum = get_mae_mse(output.squeeze(), y.squeeze(), inverse_transform) mae += mae_accum mse += mse_accum total += 1 val_loss = val_loss/total mae = mae/total mse = mse/total print(f'[ep {epoch}][Test MAE: {mae:.4f}][Test MSE: {mse:.4f}]') # yreal = np.array(yreal).flatten() # ypredicha = np.array(ypredicha).flatten() # comprobar si funciona. losses['yreal'] = np.array([el.item() for a in yreal for el in a]) losses['ypredicha'] = np.array([el.item() for a in ypredicha for el in a]) print(f'Test Loss (MSE): {mse}') losses['test_mse'] = mse # .item()) print(f'Test Loss (MAE): {mae}') losses['test_mae'] = mae # .item()) with open(SAVE_FILENAME, 'wb') as handle: pickle.dump(losses, handle, protocol=pickle.HIGHEST_PROTOCOL)
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signin/tests.py
pptnz/swa_team2
0
1343
<reponame>pptnz/swa_team2 import json from django.test import TestCase from django.contrib.auth.models import User from .models import CustomUser from django.apps import apps from .apps import SigninConfig class SignInTest(TestCase): def setUp(self): self.django_user = User.objects.create_user(username='testusername', password='<PASSWORD>') self.custom_user = CustomUser.objects.create(django_user=self.django_user) def test_apps(self): self.assertEqual(SigninConfig.name, 'signin') self.assertEqual(apps.get_app_config('signin').name, 'signin') def test_sign_in_redirect_page(self): response = self.client.get('/') self.assertRedirects(response, '/sign_in/') def test_get(self): response = self.client.get('/sign_in/') self.assertEqual(response.status_code, 200) def test_wrong_username(self): response = self.client.post('/sign_in/', {'username': 'wrongusername', 'password': '<PASSWORD>'}) self.assertEqual(response.status_code, 200) def test_wrong_password(self): response = self.client.post('/sign_in/', {'username': 'testusername', 'password': '<PASSWORD>'}) self.assertEqual(response.status_code, 200) def test_login(self): response = self.client.post('/sign_in/', {'username': 'testusername', 'password': '<PASSWORD>'}) self.assertRedirects(response, '/habitmaker/') # todo: change this link def test_login_other_page(self): response = self.client.post('/sign_in/?next=/habitmaker/', {'username': 'testusername', 'password': '<PASSWORD>'}) self.assertRedirects(response, '/habitmaker/') def test_form_not_valid(self): response = self.client.post('/sign_in/', {'username': 'testusername'}) self.assertEqual(response.status_code, 200) def test_email_verification(self): self.custom_user.authenticate_email() self.assertTrue(self.custom_user.is_email_authenticated) def test_already_signed_in(self): self.client.login(username='testusername', password='<PASSWORD>') response = self.client.get('/sign_in/') self.assertRedirects(response, '/habitmaker/')
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mutagene/cli/motif_menu.py
neksa/pymutagene
3
116108
<filename>mutagene/cli/motif_menu.py import argparse import sys import logging from mutagene.io.context_window import read_MAF_with_context_window, read_VCF_with_context_window from mutagene.motifs import identify_motifs from mutagene.io.motifs import write_motif_matches, get_known_motifs logger = logging.getLogger(__name__) genome_error_message = """requires genome name argument -g hg19, hg38, mm10, see http://hgdownload.cse.ucsc.edu/downloads.html for more Use mutagene fetch to download genome assemblies""" class MotifMenu(object): def __init__(self, parser): parser.description = "" parser.epilog = """ Examples: # search in sample2.vcf for all preidentified motifs in mutagene using hg19 mutagene motif --infile sample2.vcf --input-format VCF --genome hg19 # search for the presence of the C[A>T] motif in sample1.maf using hg19 not checking for strand-specificity mutagene motif --infile sample1.maf --input-format MAF --genome hg19 --motif 'C[A>T]' --strand A """ ################################################################### required_group = parser.add_argument_group('Required arguments') required_group.add_argument( "--infile", "-i", help="Input file in MAF or VCF format with one or multiple samples", type=argparse.FileType('r')) required_group.add_argument( '--genome', "-g", help="Location of genome assembly file in 2bit format", type=str) ################################################################### optional_group = parser.add_argument_group('Optional arguments') optional_group.add_argument('--input-format', "-f", help="Input format: MAF, VCF", type=str, choices=['MAF', 'VCF'], default='MAF') optional_group.add_argument( "--motif", "-m", help="Motif to search for, use the 'R[C>T]GY' syntax for the motif. Use quotes", type=str) optional_group.add_argument( '--outfile', "-o", nargs='?', type=argparse.FileType('w'), default=sys.stdout, help="Name of output file, will be generated in TSV format") # for backwards compatibility with 0.8.X add a hidden action that would just take anything as a valid input optional_group.add_argument('action', nargs="?", metavar="") ################################################################### advanced_group = parser.add_argument_group('Advanced arguments') advanced_group.add_argument( '--window-size', "-w", help="Context window size for motif search, default setting is 50", type=int, default=50) advanced_group.add_argument( '--strand', "-s", help="Transcribed strand (T), non-transcribed (N), any (A), or all (TNA default) ", type=str, default='TNA', choices=['T', 'N', 'A', 'TNA']) advanced_group.add_argument( '--threshold', "-t", help="Significance threshold for qvalues, default value=0.05", type=float, default=0.05) advanced_group.add_argument( '--save-motif-matches', help="Save mutations in matching motifs to a BED file", type=argparse.FileType('w'), default=None) advanced_group.add_argument( '--test', help="Statistical test to use", type=str, default='Fisher', choices=['Fisher', 'Chi2']) self.parser = parser @classmethod def search(cls, args): if not args.infile: logger.warning("Provide input file in VCF or MAF format (-i) and a corresponding genome assembly (-g)") return if not args.genome: logger.warning(genome_error_message) return if args.threshold > 1.0 or args.threshold < 0.0: logger.warning("The threshold value should be between 0.0 and 1.0, inclusive") return if not args.motif: logger.info("Searching for predefined motifs") logger.info("Will reduce statistical power because of multiple comparisons") custom_motif = None else: custom_motif = args.motif custom_motif = custom_motif.replace('-', '>') custom_motif = custom_motif.replace('/', '>') custom_motif = custom_motif.replace('.', '>') custom_motif = custom_motif.replace('->', '>') if ">" not in custom_motif or "]" not in custom_motif: logger.warning( "Mutagene motif search failed because motif cannot be processed." "Check to make sure motif input is in quotes") return logger.info("Searching for motif {}".format(custom_motif)) if args.window_size > 5000 or args.window_size < 1: logger.warning('window-size should be between 1 and 5000 nucleotides') return try: if args.input_format == 'VCF': mutations, mutations_with_context, processing_stats = read_VCF_with_context_window( args.infile, args.genome, args.window_size) elif args.input_format == 'MAF': mutations, mutations_with_context, processing_stats = read_MAF_with_context_window( args.infile, args.genome, args.window_size) except ValueError as e: logger.warning('Not able to parse input file in {} format: {}. You can specify a different format with --input-format (-f)'.format(args.input_format, e)) sys.exit(1) if len(mutations_with_context) == 0: logger.warning("No mutations loaded") ####################### # Performance PROFILING # import cProfile # import pstats # pr = cProfile.Profile() # pr.enable() matching_motifs = identify_motifs( samples_mutations=mutations_with_context, custom_motif=custom_motif, strand=args.strand, threshold=args.threshold, dump_matches=args.save_motif_matches, stat_type=args.test) if mutations_with_context is not None else [] ####################### # Performance PROFILING # pr.disable() # p = pstats.Stats(pr) # p.sort_stats('ncalls').print_stats(20) # strip_dirs() if len(matching_motifs) == 0: logger.warning("No significant motif matches found") else: write_motif_matches(args.outfile, matching_motifs) def list(self, args): """ Prints the list of known motifs bundled with the package""" print("\nThe list of mutational motifs that will be tested by default:") for m in get_known_motifs(): print("{:20}\t{}".format(m['name'], m['logo'])) print("any custom motif can be specified with --motif (-m)") def callback(self, args): # getattr(cls, args.action)(args) if args.infile: MotifMenu.search(args) else: self.parser.print_usage() self.list(args) sys.exit(1)
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leetcode/319-Bulb-Switcher/BulbSwitcher_001_TLE.py
cc13ny/all-in
1
175640
class Solution(object): def bulbSwitch(self, n): """ :type n: int :rtype: int """ num_of_facs = [1 for i in range(n)] for j in range(2, n + 1): for k in range(1, n / j + 1): num_of_facs[j * k - 1] += 1 res = 0 for num in num_of_facs: res += num % 2 return res
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main.py
fogcitymarathoner/gae_p27_dj17
0
1615694
import os,sys os.environ['DJANGO_SETTINGS_MODULE'] = 'p27_d17_prj.settings' # Force Django to reload its settings. from django.conf import settings settings._target = None import django.core.handlers.wsgi import django.core.signals import django.db import django.dispatch # Log errors. #import logging #def log_exception(*args, **kwds): # logging.exception('Exception in request:') # #django.dispatch.Signal.connect( # django.core.signals.got_request_exception, log_exception) # Unregister the rollback event handler. django.dispatch.Signal.disconnect( django.core.signals.got_request_exception, django.db._rollback_on_exception) app = django.core.handlers.wsgi.WSGIHandler()
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conllu/conllu.py
spyysalo/conllu.py
13
53528
#!/usr/bin/env python # CoNLL-U format support import re import codecs import brat from itertools import groupby # feature name-value separator FSEP = '=' # dependency head-rel separator DSEP = ':' # Free-form text annotation type in brat export COMMENT_TYPE = 'AnnotatorNotes' class FormatError(Exception): def __init__(self, msg, line=None, linenum=None): self.msg = msg self.line = line self.linenum = linenum def __str__(self): msg = self.msg if self.line is not None: msg += ': "'+self.line.encode('ascii', 'replace')+'"' if self.linenum is not None: msg += ' (line %d)' % self.linenum return msg CPOSTAG_RE = re.compile(r'^[a-zA-Z]+$') POSTAG_RE = re.compile(r'^[\x20-\xff]+$') class Element(object): """Represents CoNLL-U word or multi-word token.""" def __init__(self, id_, form, lemma, cpostag, postag, feats, head, deprel, deps, misc, offset=0): self.id = id_ self.form = form self.lemma = lemma self.cpostag = cpostag self.postag = postag self._feats = feats self.head = head self.deprel = deprel self._deps = deps self.misc = misc self.offset = offset self.sentence = None self.validate() self._fmap = None self._dlist = None def validate(self): # minimal format validation (incomplete) if not self.is_word(): # TODO: check multi-word tokens return # some character set constraints if not CPOSTAG_RE.match(self.cpostag): raise FormatError('invalid CPOSTAG: %s' % self.cpostag) if not POSTAG_RE.match(self.postag): raise FormatError('invalid POSTAG: %s' % self.postag) # no feature is empty if any(True for s in self._feats if len(s) == 0): raise FormatError('empty feature: %s' % str(self._feats)) # feature names and values separated by feature separator if any(s for s in self._feats if len(s.split(FSEP)) < 2): raise FormatError('invalid features: %s' % str(self._feats)) # no feature name repeats if any(n for n, g in groupby(sorted(s.split(FSEP)[0] for s in self._feats)) if len(list(g)) > 1): raise FormatError('duplicate features: %s' % str(self._feats)) # head is integer try: int(self.head) except ValueError: raise FormatError('non-int head: %s' % self.head) def is_word(self): try: val = int(self.id) return True except ValueError: return False def has_feat(self, name): return name in self.feat_map() def add_feats(self, feats): # name-value pairs assert not any(nv for nv in feats if len(nv) != 2) self._feats.extend(FSEP.join(nv) for nv in feats) self._fmap = None def set_feats(self, feats): self._feats = [] self.add_feats(feats) self._fmap = None def remove_feat(self, name, value): nv = FSEP.join((name, value)) self._feats.remove(nv) self._fmap = None def append_misc(self, value): if self.misc == '_': self.misc = value else: self.misc = self.misc + '|' + value def feat_names(self): return [f.split(FSEP)[0] for f in self._feats] def feat_map(self): if self._fmap is None: try: self._fmap = dict([f.split(FSEP, 1) for f in self._feats]) except ValueError: raise ValueError('failed to convert ' + str(self._feats)) return self._fmap def feats(self): return self.feat_map().items() def deps(self, include_primary=False): if self._dlist is None: try: self._dlist = [d.split(DSEP, 1) for d in self._deps] except: raise FormatError('failed to parse ' + str(self._deps)) if not include_primary: return self._dlist else: return [(self.head, self.deprel)] + self._dlist def set_deps(self, dlist): self._deps = [DSEP.join(hd) for hd in dlist] self._dlist = None def has_deprel(self, deprel, check_deps=True): if self.deprel == deprel: return True elif not check_deps: return False elif any(d for d in self.deps() if d[1] == deprel): return True else: return False def wipe_annotation(self): self.lemma = '_' self.cpostag = '_' self.postag = '_' self._feats = '_' self.head = '_' self.deprel = '_' self._deps = '_' self.misc = '_' def to_brat_standoff(self, element_by_id): """Return list of brat standoff annotations for the element.""" # base ID, unique within the document bid = '%s.%s' % (self.sentence.id, self.id) if self.is_word(): # Word, maps to: Textbound with the coarse POS tag as # type, freeform text comment with LEMMA, POSTAG and # MISC (when nonempty) as values, attribute for each # feature. # textbounds spans = [[self.offset, self.offset+len(self.form)]] textbounds = [ brat.Textbound('T'+bid, self.cpostag, spans, self.form), ] # comments freeform = [ ('LEMMA', self.lemma), ('POSTAG', self.postag), ] if self.misc != '_': freeform.append(('MISC', self.misc)) comments = [ brat.Comment('#'+bid, COMMENT_TYPE, 'T'+bid, ' '.join(u'%s=%s' % f for f in freeform)) ] # attributes attribs = [] for name, value in self.feats(): aid = 'A'+bid+'-%d'%(len(attribs)+1) attribs.append(brat.Attribute(aid, name, 'T'+bid, value)) # relations relations = [] for head, deprel in self.deps(include_primary=True): if head == '0': continue # skip root rid = 'R'+bid+'-%d'%(len(relations)+1) tid = '%s.%s' % (self.sentence.id, element_by_id[head].id) args = [('Arg1', 'T'+tid), ('Arg2', 'T'+bid)] relations.append(brat.Relation(rid, deprel, args)) return textbounds + attribs + relations + comments else: # Multi-word token, maps to: Textbound with a special type, # and free-text comment containing the form. # Span corresponds to maximum span over covered tokens. start, end = self.id.split('-') first, last = element_by_id[start], element_by_id[end] spans = [[first.offset, last.offset+len(last.form)]] text = ' '.join(str(element_by_id[str(t)].form) for t in range(int(start), int(end)+1)) return [ brat.Textbound('T'+bid, 'Multiword-token', spans, text), brat.Comment('#'+bid, COMMENT_TYPE, 'T'+bid, 'FORM='+self.form) ] def __unicode__(self): fields = [self.id, self.form, self.lemma, self.cpostag, self.postag, self._feats, self.head, self.deprel, self._deps, self.misc] fields[5] = '_' if fields[5] == [] else '|'.join(sorted(fields[5], key=lambda s: s.lower())) # feats fields[8] = '_' if fields[8] == [] else '|'.join(fields[8]) # deps return '\t'.join(fields) @classmethod def from_string(cls, s): fields = s.split('\t') if len(fields) != 10: raise FormatError('got %d/10 field(s)' % len(fields), s) fields[5] = [] if fields[5] == '_' else fields[5].split('|') # feats fields[8] = [] if fields[8] == '_' else fields[8].split('|') # deps return cls(*fields) class Sentence(object): def __init__(self, id_=0, filename=None, base_offset=0): """Initialize a new, empty Sentence.""" self.comments = [] self._elements = [] self.id = id_ self.filename = filename self.base_offset = base_offset self.next_offset = base_offset # mapping from IDs to elements self._element_by_id = None def append(self, element): """Append word or multi-word token to sentence.""" self._elements.append(element) assert element.sentence is None, 'element in multiple sentences?' element.sentence = self element.offset = self.next_offset if element.is_word(): self.next_offset += len(element.form) + 1 else: # multi-word token; don't shift position of next token pass # reset cache (TODO: extend instead) self._element_by_id = None def empty(self): return self._elements == [] def words(self): """Return a list of the words in the sentence.""" return [e for e in self._elements if e.is_word()] def text(self, use_tokens=False, separator=' '): """Return the text of the sentence.""" if use_tokens: raise NotImplementedError('multi-word token text not supported.') else: return separator.join(w.form for w in self.words()) def length(self, use_tokens=False): """Return the length of the sentence text.""" return len(self.text(use_tokens)) def element_by_id(self): """Return mapping from id to element.""" if self._element_by_id is None: self._element_by_id = { e.id: e for e in self._elements } return self._element_by_id def get_element(self, id_): """Return element by id.""" return self.element_by_id()[id_] def wipe_annotation(self): for e in self._elements: if e.is_word(): e.wipe_annotation() def remove_element(self, id_): # TODO: implement for cases where multi-word tokens span the # element to remove. assert len(self.words()) == len(self._elements), 'not implemented' # there must not be references to the element to remove for w in self.words(): assert not any(h for h, d in w.deps(True) if h == id_), \ 'cannot remove %s, references remain' % id_ # drop element element = self.get_element(id_) self._elements.remove(element) self._element_by_id = None # update IDs id_map = { u'0' : u'0' } for i, w in enumerate(self.words()): new_id = unicode(i+1) id_map[w.id] = new_id w.id = new_id for w in self.words(): w.head = id_map[w.head] w.set_deps([(id_map[h], d) for h, d in w.deps()]) def dependents(self, head, include_secondary=True): if isinstance(head, Element): head_id = head.id deps = [] for w in self.words(): if not include_secondary: wdeps = [(w.head, w.deprel)] else: wdeps = w.deps(include_primary=True) for head, deprel in wdeps: if head == head_id: deps.append((w.id, deprel)) return deps def assign_offsets(self, base_offset=None, use_tokens=False): """Assign offsets to sentence elements.""" if base_offset is not None: self.base_offset = base_offset offset = self.base_offset if use_tokens: raise NotImplementedError('multi-word token text not supported.') else: # Words are separated by a single character and multi-word # tokens appear at the start of the position of their # initial words with zero-width spans. for e in self._elements: e.offset = offset if e.is_word(): offset += len(e.form) + 1 def to_brat_standoff(self): """Return list of brat standoff annotations for the sentence.""" # Create mapping from ID to element. annotations = [] for element in self._elements: annotations.extend(element.to_brat_standoff(self.element_by_id())) return annotations def __unicode__(self): element_unicode = [unicode(e) for e in self._elements] return '\n'.join(self.comments + element_unicode)+'\n' class Document(object): def __init__(self, filename=None): self._sentences = [] self.filename = filename def append(self, sentence): """Append sentence to document.""" self._sentences.append(sentence) def empty(self): return self._sentences == [] def words(self): """Return a list of the words in the document.""" return [w for s in self.sentences() for w in s.words()] def sentences(self): """Return a list of the sentences in the document.""" return self._sentences def text(self, use_tokens=False, element_separator=' ', sentence_separator='\n'): return sentence_separator.join(s.text(use_tokens, element_separator) for s in self.sentences()) def to_brat_standoff(self): """Return list of brat standoff annotations for the document.""" annotations = [] for sentence in self._sentences: annotations.extend(sentence.to_brat_standoff()) return annotations def _file_name(file_like, default='document'): """Return name of named file or file-like object, or default if not available.""" # If given a string, assume that it's the name if isinstance(file_like, basestring): return file_like try: return file_like.name except AttributeError: return default def read_documents(source, filename=None): """Read CoNLL-U format, yielding Document objects.""" if filename is None: filename = _file_name(source) current = Document(filename) for sentence in read_conllu(source, filename): # TODO: recognize and respect document boundaries in source data. current.append(sentence) yield current def read_conllu(source, filename=None): """Read CoNLL-U format, yielding Sentence objects. Note: incomplete implementation, lacks validation.""" # If given a string, assume it's a file name, open and recurse. if isinstance(source, basestring): with codecs.open(source, encoding='utf-8') as i: for s in read_conllu(i, filename=source): yield s return if filename is None: filename = _file_name(source) sent_num, offset = 1, 0 current = Sentence(sent_num, filename, offset) for ln, line in enumerate(source): line = line.rstrip('\n') if not line: if not current.empty(): # Assume single character sentence separator. offset += current.length() + 1 yield current else: raise FormatError('empty sentence', line, ln+1) sent_num += 1 current = Sentence(sent_num, filename, offset) elif line[0] == '#': current.comments.append(line) else: try: current.append(Element.from_string(line)) except FormatError, e: e.linenum = ln+1 raise e assert current.empty(), 'missing terminating whitespace'
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src/riotwatcher/__version__.py
mikeread-dev/Riot-Watcher
0
54996
__version__ = "3.1.2" __author__ = "pseudonym117" __title__ = "RiotWatcher"
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practices/practice_2.2/src/database/manage/__init__.py
JoelHernandez343/networking-administration
0
1616295
from database import models from database.database import engine from database.manage import interface from database.manage import vlan def drop_db(): models.Base.metadata.drop_all(bind=engine) def create_db(): models.Base.metadata.create_all(bind=engine) def recreate_db(): drop_db() create_db()
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plugins/modules/channel_policy.py
m-g-k/ansible-collection
1
64331
#!/usr/bin/python # # SPDX-License-Identifier: Apache-2.0 # from __future__ import absolute_import, division, print_function __metaclass__ = type from ..module_utils.dict_utils import equal_dicts, merge_dicts, copy_dict from ..module_utils.module import BlockchainModule from ..module_utils.proto_utils import proto_to_json, json_to_proto from ansible.module_utils._text import to_native import json ANSIBLE_METADATA = {'metadata_version': '1.1', 'status': ['preview'], 'supported_by': 'community'} DOCUMENTATION = ''' --- module: channel_policy short_description: Manage a policy for a Hyperledger Fabric channel description: - Add, update, and remove policies for a Hyperledger Fabric channel by using the IBM Blockchain Platform. - This module works with the IBM Blockchain Platform managed service running in IBM Cloud, or the IBM Blockchain Platform software running in a Red Hat OpenShift or Kubernetes cluster. author: <NAME> (@sstone1) options: state: description: - C(absent) - An policy matching the specified name will be removed from the channel. - C(present) - Asserts that an policy matching the specified name and configuration exists in the channel. If no policy matches the specified name, the policy will be added to the channel. If an policy matches the specified name but the configuration does not match, then the policy in the channel will be updated. type: str default: present choices: - absent - present path: description: - Path to current the channel configuration file. - This file can be fetched by using the M(channel_config) module. - This file will be updated in place. You will need to keep a copy of the original file for computing the configuration update. type: str required: true name: description: - The name of the policy to add, update, or remove from the channel. type: str required: true policy: description: - The policy to add, update, or remove from the channel. - You can pass a string, which is a path to a JSON file containing a policy in the Hyperledger Fabric format (common.Policy). - You can also pass a dict, which must correspond to a parsed policy in the Hyperledger Fabric format (common.Policy). - Only required when I(state) is C(present). type: raw required: true notes: [] requirements: [] ''' EXAMPLES = ''' - name: Add the policy to the channel ibm.blockchain_platform.channel_policy: state: present api_endpoint: https://ibp-console.example.org:32000 api_authtype: basic api_key: xxxxxxxx api_secret: <KEY> name: Admins policy: admins-policy.json path: channel_config.bin - name: Remove the policy to the channel ibm.blockchain_platform.channel_policy: state: absent api_endpoint: https://ibp-console.example.org:32000 api_authtype: basic api_key: xxxxxxxx api_secret: <KEY> name: Admins path: channel_config.bin ''' RETURN = ''' --- {} ''' def main(): # Create the module. argument_spec = dict( state=dict(type='str', default='present', choices=['present', 'absent']), path=dict(type='str', required=True), name=dict(type='str', required=True), policy=dict(type='raw', required=True) ) required_if = [ ] module = BlockchainModule(argument_spec=argument_spec, supports_check_mode=True, required_if=required_if) # Ensure all exceptions are caught. try: # Get the target path, policy name and policy. path = module.params['path'] name = module.params['name'] policy = module.params['policy'] if isinstance(policy, str): with open(policy, 'r') as file: policy = json.load(file) elif isinstance(policy, dict): pass else: raise Exception(f'The policy {name} is invalid') # Read the config. with open(path, 'rb') as file: config_json = proto_to_json('common.Config', file.read()) # Check to see if the channel member exists. application_policies = config_json['channel_group']['groups']['Application']['policies'] policy_wrapper = application_policies.get(name, None) # Handle the desired state appropriately. state = module.params['state'] if state == 'present' and policy_wrapper is None: # Add the channel policy. application_policies[name] = dict( mod_policy='Admins', policy=policy ) elif state == 'present' and policy_wrapper is not None: # Update the channel policy. updated_policy_wrapper = copy_dict(policy_wrapper) merge_dicts(updated_policy_wrapper['policy'], policy) if equal_dicts(policy_wrapper, updated_policy_wrapper): return module.exit_json(changed=False) application_policies[name] = updated_policy_wrapper elif state == 'absent' and policy_wrapper is None: # Nothing to do. return module.exit_json(changed=False) elif state == 'absent' and policy_wrapper is not None: # Delete the channel member. del application_policies[name] # Save the config. config_proto = json_to_proto('common.Config', config_json) with open(path, 'wb') as file: file.write(config_proto) module.exit_json(changed=True) # Notify Ansible of the exception. except Exception as e: module.fail_json(msg=to_native(e)) if __name__ == '__main__': main()
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Diena_1_4_thonny/d2_u2_d11.py
edzya/Python_RTU_08_20
8
34881
<filename>Diena_1_4_thonny/d2_u2_d11.py try: width=float(input("Ieraksti savas istabas platumu (metros): ")) height=float(input("Ieraksti savas istabas augstumu (metros): ")) length=float(input("Ieraksti savas istabas garumu (metros): ")) capacity=round(width*height*length, 2) print(f"Tavas istabas tilpums ir {capacity} m\u00b3.") except ValueError: print("Ievadiet vērtību ciparos! Komata vietā jālieto punkts.") print("*"*30)
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my_app/templates/model.py
varshaholsambre/Whats-For-Dinner
0
113164
from my_app import db class Fact(db.Model): id = db.Column(db.Integer, primary_keys = True) name = db.Column(db.String(100)) value = db.Column(db.String(100))
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test/propagation_warn_only_test.py
lechat/jenkinsflow
0
21075
# Copyright (c) 2012 - 2015 <NAME>, Hupfeldt IT # All rights reserved. This work is under a BSD license, see LICENSE.TXT. from pytest import raises from jenkinsflow.flow import serial, parallel, FailedChildJobException, FailedChildJobsException, Propagation, BuildResult from .framework import api_select from .framework.utils import pre_existing_fake_cli def test_propagation_warn_only_serial(api_type, fake_java): with api_select.api(__file__, api_type, login=True) as api: pre_existing_fake_cli(api_type) api.flow_job() api.job('j11', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=1) api.job('j12_fail', exec_time=0.01, max_fails=1, expect_invocations=1, expect_order=2, serial=True) api.job('j13', exec_time=0.01, max_fails=0, expect_invocations=0, expect_order=None) with serial(api, timeout=70, job_name_prefix=api.job_name_prefix, report_interval=3, propagation=Propagation.FAILURE_TO_UNSTABLE) as ctrl1: ctrl1.invoke('j11') ctrl1.invoke('j12_fail') ctrl1.invoke('j13') assert ctrl1.result == BuildResult.UNSTABLE # Note: the fact that no error was raised also implies that the failure didn't propagate as failure def test_propagation_warn_only_parallel(api_type, fake_java): with api_select.api(__file__, api_type, login=True) as api: pre_existing_fake_cli(api_type) api.flow_job() api.job('j1_fail', exec_time=0.01, max_fails=1, expect_invocations=1, expect_order=1) api.job('j2', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=1) with parallel(api, timeout=70, job_name_prefix=api.job_name_prefix, report_interval=3, propagation=Propagation.FAILURE_TO_UNSTABLE) as ctrl1: ctrl1.invoke('j1_fail') ctrl1.invoke('j2') def test_propagation_warn_only_nested_serial_parallel(api_type, fake_java): with api_select.api(__file__, api_type, login=True) as api: pre_existing_fake_cli(api_type) api.flow_job() api.job('j11', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=1) api.job('j21', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=2, serial=True) api.job('j22_fail', exec_time=0.01, max_fails=1, expect_invocations=1, expect_order=2) api.job('j23', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=2) with serial(api, timeout=70, job_name_prefix=api.job_name_prefix, report_interval=3) as ctrl1: ctrl1.invoke('j11') with ctrl1.parallel(propagation=Propagation.FAILURE_TO_UNSTABLE) as ctrl2: ctrl2.invoke('j21') ctrl2.invoke('j22_fail') ctrl2.invoke('j23') def test_propagation_warn_only_nested_parallel_serial(api_type, fake_java): with api_select.api(__file__, api_type, login=True) as api: pre_existing_fake_cli(api_type) api.flow_job() api.job('j11', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=1) api.job('j21', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=1) api.job('j22_fail', exec_time=0.01, max_fails=1, expect_invocations=1, expect_order=1, serial=True) api.job('j23', exec_time=0.01, max_fails=0, expect_invocations=0, expect_order=None) with parallel(api, timeout=70, job_name_prefix=api.job_name_prefix, report_interval=3) as ctrl1: ctrl1.invoke('j11') with ctrl1.serial(propagation=Propagation.FAILURE_TO_UNSTABLE) as ctrl2: ctrl2.invoke('j21') ctrl2.invoke('j22_fail') ctrl2.invoke('j23') def test_propagation_warn_only_nested_serial_serial(api_type, fake_java): with api_select.api(__file__, api_type, login=True) as api: pre_existing_fake_cli(api_type) api.flow_job() api.job('j11', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=1) api.job('j21', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=2) api.job('j22_fail', exec_time=0.01, max_fails=1, expect_invocations=1, expect_order=2) api.job('j23', exec_time=0.01, max_fails=0, expect_invocations=0, expect_order=None) with serial(api, timeout=70, job_name_prefix=api.job_name_prefix, report_interval=3) as ctrl1: ctrl1.invoke('j11') with ctrl1.serial(propagation=Propagation.FAILURE_TO_UNSTABLE) as ctrl2: ctrl2.invoke('j21') ctrl2.invoke('j22_fail') ctrl2.invoke('j23') def test_propagation_warn_only_nested_parallel_parallel(api_type, fake_java): with api_select.api(__file__, api_type, login=True) as api: pre_existing_fake_cli(api_type) api.flow_job() api.job('j11', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=1) api.job('j21', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=1) api.job('j22_fail', exec_time=0.01, max_fails=1, expect_invocations=1, expect_order=1) api.job('j23', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=1) with parallel(api, timeout=70, job_name_prefix=api.job_name_prefix, report_interval=3) as ctrl1: ctrl1.invoke('j11') with ctrl1.parallel(propagation=Propagation.FAILURE_TO_UNSTABLE) as ctrl2: ctrl2.invoke('j21') ctrl2.invoke('j22_fail') ctrl2.invoke('j23') def test_propagation_warn_only_nested_serial_serial_continue(api_type, fake_java): with api_select.api(__file__, api_type, login=True) as api: pre_existing_fake_cli(api_type) api.flow_job() api.job('j11', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=1) api.job('j21', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=2) api.job('j22_fail', exec_time=0.01, max_fails=1, expect_invocations=1, expect_order=3) api.job('j23', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=4) with serial(api, timeout=70, job_name_prefix=api.job_name_prefix, report_interval=3) as ctrl1: ctrl1.invoke('j11') with ctrl1.serial() as ctrl2: ctrl2.invoke('j21') with ctrl2.serial(propagation=Propagation.FAILURE_TO_UNSTABLE) as ctrl3: ctrl3.invoke('j22_fail') ctrl2.invoke('j23') def test_propagation_warn_only_nested_parallel_serial_continue(api_type, fake_java): with api_select.api(__file__, api_type, login=True) as api: pre_existing_fake_cli(api_type) api.flow_job() api.job('j11', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=1) api.job('j21', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=1) api.job('j22_fail', exec_time=0.01, max_fails=1, expect_invocations=1, expect_order=1) api.job('j23', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=1) with parallel(api, timeout=70, job_name_prefix=api.job_name_prefix, report_interval=3) as ctrl1: ctrl1.invoke('j11') with ctrl1.serial() as ctrl2: ctrl2.invoke('j21') with ctrl2.serial(propagation=Propagation.FAILURE_TO_UNSTABLE) as ctrl3: ctrl3.invoke('j22_fail') ctrl2.invoke('j23') def test_propagation_warn_only_nested_serial_serial_continue_fail(api_type): with api_select.api(__file__, api_type, login=True) as api: pre_existing_fake_cli(api_type) api.flow_job() api.job('j11', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=1) api.job('j21', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=2) api.job('j22_fail', exec_time=0.01, max_fails=1, expect_invocations=1, expect_order=3) api.job('j23_fail', exec_time=0.01, max_fails=1, expect_invocations=1, expect_order=4) with raises(FailedChildJobException): with serial(api, timeout=70, job_name_prefix=api.job_name_prefix, report_interval=3) as ctrl1: ctrl1.invoke('j11') with ctrl1.serial() as ctrl2: ctrl2.invoke('j21') with ctrl2.serial(propagation=Propagation.FAILURE_TO_UNSTABLE) as ctrl3: ctrl3.invoke('j22_fail') ctrl2.invoke('j23_fail') def test_propagation_warn_only_nested_parallel_serial_continue_fail(api_type): with api_select.api(__file__, api_type, login=True) as api: pre_existing_fake_cli(api_type) api.flow_job() api.job('j11', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=1) api.job('j21', exec_time=0.01, max_fails=0, expect_invocations=1, expect_order=1) api.job('j22_fail', exec_time=0.01, max_fails=1, expect_invocations=1, expect_order=1) api.job('j23_fail', exec_time=0.01, max_fails=1, expect_invocations=1, expect_order=1) with raises(FailedChildJobsException): with parallel(api, timeout=70, job_name_prefix=api.job_name_prefix, report_interval=3) as ctrl1: ctrl1.invoke('j11') with ctrl1.serial() as ctrl2: ctrl2.invoke('j21') with ctrl2.serial(propagation=Propagation.FAILURE_TO_UNSTABLE) as ctrl3: ctrl3.invoke('j22_fail') ctrl2.invoke('j23_fail')
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plugins/modules/system_certificate_info.py
steinzi/ansible-ise
0
1612480
<reponame>steinzi/ansible-ise<filename>plugins/modules/system_certificate_info.py #!/usr/bin/python # -*- coding: utf-8 -*- # Copyright (c) 2021, Cisco Systems # GNU General Public License v3.0+ (see LICENSE or https://www.gnu.org/licenses/gpl-3.0.txt) DOCUMENTATION = r""" --- module: system_certificate_info short_description: Information module for System Certificate description: - Get System Certificate by id. - Get System Certificate by name. version_added: '1.0.0' author: <NAME> (@racampos) options: hostName: description: - HostName path parameter. Name of the host of which system certificates should be returned. type: str page: description: - Page query parameter. Page number. type: int size: description: - Size query parameter. Number of objects returned per page. type: int sort: description: - Sort query parameter. Sort type - asc or desc. type: str sortBy: description: - SortBy query parameter. Sort column by which objects needs to be sorted. type: str filter: description: - > Filter query parameter. <div> <style type="text/css" scoped> .apiServiceTable td, .apiServiceTable th { padding 5px 10px !important; text-align left; } </style> <span> <b>Simple filtering</b> should be available through the filter query string parameter. The structure of a filter is a triplet of field operator and value separated with dots. More than one filter can be sent. The logical operator common to ALL filter criteria will be by default AND, and can be changed by using the <i>"filterType=or"</i> query string parameter. Each resource Data model description should specify if an attribute is a filtered field. </span> <br /> <table class="apiServiceTable"> <thead> <tr> <th>OPERATOR</th> <th>DESCRIPTION</th> </tr> </thead> <tbody> <tr> <td>EQ</td> <td>Equals</td> </tr> <tr> <td>NEQ</td> <td>Not Equals</td> </tr> <tr> <td>GT</td> <td>Greater Than</td> </tr> <tr> <td>LT</td> <td>Less Then</td> </tr> <tr> <td>STARTSW</td> <td>Starts With</td> </tr> <tr> <td>NSTARTSW</td> <td>Not Starts With</td> </tr> <tr> <td>ENDSW</td> <td>Ends With</td> </tr> <tr> <td>NENDSW</td> <td>Not Ends With</td> </tr> <tr> <td>CONTAINS</td> <td>Contains</td> </tr> <tr> <td>NCONTAINS</td> <td>Not Contains</td> </tr> </tbody> </table> </div>. type: list filterType: description: - > FilterType query parameter. The logical operator common to ALL filter criteria will be by default AND, and can be changed by using the parameter. type: str id: description: - Id path parameter. The id of the system certificate. type: str requirements: - ciscoisesdk seealso: # Reference by Internet resource - name: System Certificate reference description: Complete reference of the System Certificate object model. link: https://ciscoisesdk.readthedocs.io/en/latest/api/api.html#v3-0-0-summary """ EXAMPLES = r""" - name: Get System Certificate by id cisco.ise.system_certificate_info: ise_hostname: "{{ise_hostname}}" ise_username: "{{ise_username}}" ise_password: "{{<PASSWORD>}}" ise_verify: "{{ise_verify}}" hostName: string id: string register: result - name: Get System Certificate by name cisco.ise.system_certificate_info: ise_hostname: "{{ise_hostname}}" ise_username: "{{ise_username}}" ise_password: "{{<PASSWORD>}}" ise_verify: "{{ise_verify}}" page: 1 size: 20 sort: asc sortBy: string filter: [] filterType: AND hostName: string register: result """ RETURN = r""" ise_response: description: A dictionary or list with the response returned by the Cisco ISE Python SDK returned: always type: dict sample: > { "response": { "expirationDate": "string", "friendlyName": "string", "groupTag": "string", "id": "string", "issuedBy": "string", "issuedTo": "string", "keySize": 0, "link": { "href": "string", "rel": "string", "type": "string" }, "portalsUsingTheTag": "string", "selfSigned": true, "serialNumberDecimalFormat": "string", "sha256Fingerprint": "string", "signatureAlgorithm": "string", "usedBy": "string", "validFrom": "string" }, "version": "string" } """
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get-mensa-data/get_mensa_data.py
ProjectPepperHSB/Backend-Services
0
90616
<reponame>ProjectPepperHSB/Backend-Services<filename>get-mensa-data/get_mensa_data.py #pip install pdf2image #-- poppler -- #https://github.com/oschwartz10612/poppler-windows/releases/ #env: "C:\path\to\poppler-xx\bin" import requests import urllib.request import json import re import traceback from bs4 import BeautifulSoup from pdf2image import convert_from_path from PIL import Image url = "https://www.stw-bremen.de/de/cafeteria/bremerhaven" folder_location = "/home/docker-hbv-kms/repositories/NodeJS_Server4Pepper/public/" def getMensaData(): try: #download newest cafeteria plan response = requests.get(url) soup= BeautifulSoup(response.text, "html.parser") #create url string menucard = ((str(soup.select("a[href$='/print']")[0]).rsplit(' target', 1)[0]).split("href=",1)[1]).replace('"','') urllib.request.urlretrieve(menucard, folder_location+"Mensaplan.pdf") print("pdf downloaded") #pdf to img img = convert_from_path(folder_location+"Mensaplan.pdf", 500)[0] #crop image area = (0, 200, 4134, 2800) # R T L B cropped_img = img.crop(area) area = (0, 5200, 4134, 5800) cropped_img2 = img.crop(area) mergeImgs([cropped_img, cropped_img2]).save(folder_location+'images/mensaplan.png', 'JPEG') print("images created from pdf") #get all tbody tags from the site menulist = soup.select("tbody") menu = {} day = ["Montag","Dienstag", "Mittwoch", "Donnerstag", "Freitag"] offer1 = [] offer2 = [] for i in range(10): tmp = (str(menulist[i]).split('description">',1)[1]).rsplit("</td><td",2)[0] tmp = tmp.replace("\n","").replace("\r","").replace("a1","").replace("amp;","") tmp = re.sub('<sup>.*?</sup>', '', tmp) if(i%2==0): offer1.append(tmp) else: offer2.append(tmp) menu["day"] = day menu["offer1"] = offer1 menu["offer2"] = offer2 with open(folder_location+"mensadata.json", "w+") as f: json.dump(menu, f, ensure_ascii=False) print("menu dataframe created") except Exception: traceback.print_exc() def mergeImgs(imgs): min_img_width = min(i.width for i in imgs) total_height = 0 for i, img in enumerate(imgs): # If the image is larger than the minimum width, resize it if(img.width > min_img_width): imgs[i] = img.resize((min_img_width, int(img.height / img.width * min_img_width)), Image.ANTIALIAS) total_height += imgs[i].height img_merge = Image.new(imgs[0].mode, (min_img_width, total_height)) y = 0 for img in imgs: img_merge.paste(img, (0, y)) y += img.height return img_merge getMensaData()
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points/migrations/0004_spend_receipt.py
JXIong15/fetch-points
0
58797
# Generated by Django 4.0.1 on 2022-01-12 23:44 from django.db import migrations, models class Migration(migrations.Migration): dependencies = [ ('points', '0003_spend_alter_transaction_timestamp'), ] operations = [ migrations.AddField( model_name='spend', name='receipt', field=models.TextField(blank=True, null=True), ), ]
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django_walletpass/__init__.py
Develatio/django-passbook
7
63589
<reponame>Develatio/django-passbook # pylint: disable=invalid-name VERSION = '1.0' default_app_config = 'django_walletpass.apps.DjangoWalletpassConfig'
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etc/metadataParsers/ngrams/writeNgrams.py
organisciak/HTRC-BookwormDB
0
93549
<filename>etc/metadataParsers/ngrams/writeNgrams.py<gh_stars>0 #!/usr/bin/python import os import re filenames = [filename for filename in os.listdir("../../../texts/raw") if not (re.search('zip',filename) or re.search('3gram',filename))] for filename in filenames: towrite = dict() print filename reading = open("../../../texts/raw/" + filename) corpus = re.sub("-2009.*","",filename) corpus = re.sub("-\dgram.*","",corpus) corpus = re.sub("googlebooks-","",corpus) print corpus i = 0 for line in reading: i = i+1 if (i==1000000*round(i/1000000)): print "reading line no. \t" + str(round(i)/1000000) + " million out of c. 50 million" try: output = line.split("\t") try: year = int(output[1]) except: continue word = output[0] count= output[2] string = " ".join([word,count]) try: towrite[year].append(string) except: towrite[year] = [string] except: pass for year in towrite.keys(): print year if re.search("2gram",filename): print corpus print str(year) writing = open("../../../texts/bigrams/" + corpus+str(year)+".txt",'a') elif re.search("1gram",filename): writing = open("../../../texts/unigrams/" + corpus+str(year)+".txt",'a') else: writing = open("tmp/scratch",'a') writing.write('\n'.join(towrite[year])) writing.close()
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json.py
AbhijithGanesh/Flask-HTTP-Server
0
18858
import json ''' READ THE DATABASE README before operating ''' File = r'''YOUR FILE''' with open(File,'a') as fileObj: data = json.load() ''' YOUR DATA LOGIC GOES IN HERE Once the data is changed, to write it to your JSON file use the following command. ''' json.dump(object,File)
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tests/test_code.py
MattDMo/PythonImproved
83
120746
from . import foo from .. import bar from ... import baz import ...snurp def blah(...): pass class Foo(tuple): @staticmethod def __new__(cls, initialValue=(0,0)): return tuple.__new__(cls, initialValue) class Bar(tuple): def __init__(self, initialValue=(0,0)): super(tuple, self).__init__(initialValue) super(tuple, self).count(items, stuff="thneed") @staticmethod def somefunc(arg, arrg=pirate): pass @property list(map(str, range(100))) [str(i) for i in range(100)] sâomething(arg=22) def sâomething(): pass class sâomething(object): pass __init__(something) list(map(str, range(100))) # ^^^ support.type.python [str(i) for i in range(100)] #^^^ support.function.builtin.call.python super(arg1=1)(arg2=2) list abs, map some.None NotImplemented print (file=None) print __class__ print keyword print __init__ print(foobar) __init__ . something() callback(print) callback(range) .__init__ __init__ [2] @ deco . __init__ (call=some) # rator def function(): pass @classmethod def from_foo(cls, foo): return cls(foo, bar='baz') # highlighting for arguments broken mod.func() mod.submod.func() func().func2().attr mod.func().attr.attr2.func2() range(foo, bar) (...) __exit__ print foobar Привет_мир() or 我喜欢奶酪() or Kolbász_finom() bool class MyWarning(Warning): def __init__(self, text='first part' 'second part'): self.args = (text,) foo(text="line 1" "line 2") foobar(param=r"()") def f(): print(r"()") f() def hi(name): r""" Say hi! with a \) special characters. """ return 'hi ' + name print(hi('avi'))
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test/test_stdio.py
razor-1/apns-clerk
0
57747
# Author <NAME> # Based on apns-client implementation by <NAME> # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License. if __name__ == '__main__': import os.path import sys sys.path.append(os.path.dirname(os.path.dirname(__file__))) import unittest import datetime from apns_clerk import Session CERTIFICATE = b"""-----BEGIN CERTIFICATE----- <KEY> BgNV<KEY> -----END CERTIFICATE-----""" PRIVATE_KEY = b"""-----BEGIN RSA PRIVATE KEY----- Proc-Type: 4,ENCRYPTED DEK-Info: DES-EDE3-CBC,3195B956C3AD71F6 g7mfzdit5/<KEY>""" PRIVATE_PASS = "<PASSWORD>" class Python26Mixin(object): """ Adds missing methods to test cases in Python 2.6 environment. """ def assertIsNotNone(self, value, msg=None): """ Fail if value is None. """ parent = super(Python26Mixin, self) if hasattr(parent, 'assertIsNotNone'): parent.assertIsNotNone(value, msg) else: if value is None: raise self.failureException(msg or '%r is None' % value) class StdIOBackendTest(Python26Mixin, unittest.TestCase): """ Test stdio features. """ def setUp(self): self.session = Session(pool="apns_clerk.backends.stdio") def test_locking(self): """ Test thread locking mechanism """ lock = self.session.pool.create_lock() self.assertIsNotNone(lock) self.assertTrue(hasattr(lock, "acquire")) self.assertTrue(hasattr(lock, "release")) lock.acquire() lock.release() def test_certificates(self): """ Test pyOpenSSL certificates. """ cert = self.session.pool.get_certificate({ "cert_string": CERTIFICATE, "key_string": PRIVATE_KEY, "passphrase": <PASSWORD> }) cert2 = self.session.pool.get_certificate({ "cert_string": (CERTIFICATE + b"\n" + PRIVATE_KEY), "passphrase": PRIVATE_PASS }) self.assertIsNotNone(cert.get_context()) self.assertEqual(cert, cert2) def test_outdate(self): # we are not allowed to do any IO in tests, so no real connections. # however, it is good idea to test utility functions even with empty pool. self.session.outdate(datetime.timedelta(seconds=60)) self.session.shutdown() if __name__ == '__main__': unittest.main()
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tensorflow_in_action/nlp/2_ptb_gen_idword.py
wdxtub/deep-learning-note
37
31273
import codecs import sys RAW_DATA = "../data/ptb/ptb.train.txt" VOCAB = "data/ptb.vocab" OUTPUT_DATA = "data/ptb.train" # 读取词汇表并建立映射 with codecs.open(VOCAB, "r", "utf-8") as f_vocab: vocab = [w.strip() for w in f_vocab.readlines()] word_to_id = {k: v for (k, v) in zip(vocab, range(len(vocab)))} # 如果出现了被删除的低频词,替换成 <unk> def get_id(word): return word_to_id[word] if word in word_to_id else word_to_id["<unk>"] fin = codecs.open(RAW_DATA, "r", "utf-8") fout = codecs.open(OUTPUT_DATA, 'w', 'utf-8') for line in fin: words = line.strip().split() + ["<eos>"] # 读取单词并添加 <eos> 结束符 # 将每个单词替换为词汇表中的编号 out_line = ' '.join([str(get_id(w)) for w in words]) + '\n' fout.write(out_line) fin.close() fout.close()
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