qsimeon commited on
Commit
eec39e4
·
verified ·
1 Parent(s): 567b49f

+ links to original repo

Browse files
Files changed (1) hide show
  1. README.md +7 -1
README.md CHANGED
@@ -13,6 +13,10 @@ license: mit
13
 
14
  [Q. Simeon, L. Venâncio, M. A. Skuhersky, A. Nayebi, E. S. Boyden and G. R. Yang, "Scaling Properties for Artificial Neural Network Models of a Small Nervous System," SoutheastCon 2024, Atlanta, GA, USA, 2024, pp. 516-524, doi: 10.1109/SoutheastCon52093.2024.10500049.](https://ieeexplore.ieee.org/document/10500049)
15
 
 
 
 
 
16
  **FIGURE**
17
 
18
  Compiled neural activity dataset from GCaMP calcium imaging of _C. elegans_ from multiple experimental sources, standardized to a common sampling rate and organization format.
@@ -32,4 +36,6 @@ Google Colab notebook example of loading this dataset and then plotting a few sa
32
 
33
  **ORIGINAL DATA FILES**
34
 
35
- We provide a [Dropbox link](https://www.dropbox.com/scl/fi/vfygz1twi1jg62cfssc0w/opensource_data.zip?rlkey=qa4vpwcoza3k9v5o2watwblth&dl=0) to download the original data that we obtained from various sources, including publicly available and unpublished data shared with us by researchers. The `raw_data_file` in the dataset table references these files.
 
 
 
13
 
14
  [Q. Simeon, L. Venâncio, M. A. Skuhersky, A. Nayebi, E. S. Boyden and G. R. Yang, "Scaling Properties for Artificial Neural Network Models of a Small Nervous System," SoutheastCon 2024, Atlanta, GA, USA, 2024, pp. 516-524, doi: 10.1109/SoutheastCon52093.2024.10500049.](https://ieeexplore.ieee.org/document/10500049)
15
 
16
+ <a href="https://github.com/qsimeon/worm-data-preprocess">
17
+ <img src="https://img.shields.io/badge/GitHub-100000?style=for-the-badge&logo=github&logoColor=white" />
18
+ </a>
19
+
20
  **FIGURE**
21
 
22
  Compiled neural activity dataset from GCaMP calcium imaging of _C. elegans_ from multiple experimental sources, standardized to a common sampling rate and organization format.
 
36
 
37
  **ORIGINAL DATA FILES**
38
 
39
+ We provide a [Dropbox link](https://www.dropbox.com/scl/fi/vfygz1twi1jg62cfssc0w/opensource_data.zip?rlkey=qa4vpwcoza3k9v5o2watwblth&dl=0) to download the original data that we obtained from various sources, including publicly available and unpublished data shared with us by researchers. The `raw_data_file` in the dataset table references these files.
40
+
41
+ If you'd like to preprocess the data from scratch using different preprocessing settings or datasets, you may do so using the code in the [worm-data-preprocess](https://github.com/qsimeon/worm-data-preprocess) repo.