metadata
license: mit
task_categories:
- text-classification
- translation
- zero-shot-classification
- text2text-generation
- fill-mask
tags:
- chemistry
- biology
- synthetic
- SMILES
size_categories:
- 10M<n<100M
cyc-pep-6-12mer-70M-2024
Set of 70 million (almost) unique cyclic and linear peptides comprising 6-12 amino acids.
Dataset Details
Dataset Description
- Curated by: @eachanjohnson
- Funded by: The Francis Crick Institute
- License: MIT
Dataset Sources [optional]
- Repository: [https://huggingface.co/datasets/scbirlab/cyc-pep-6-12mer-70M-2024]
Dataset Structure
- linear_id: Identifier for linear peptide
- peptide_sequence: Amino acid sequence of linear peptide
- SMILES: SMILES string of linear peptide
- cyclic_id: Identifier for cyclic peptide
- cysteine_to_N_cyclization: SMILES string of cyclic peptide
Dataset Creation
Curation Rationale
To develop a large dataset of SMILES strings for peptides.
Data Collection and Processing
Data were generated using schemist, a tool for processing chemical datasets.
Who are the source data producers?
Eachan Johnson (@eachanjohnson).
Personal and Sensitive Information
None
Dataset Card Contact