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--- |
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dataset_info: |
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features: |
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- name: SUBJECT_ID |
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dtype: int64 |
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- name: TEXT |
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dtype: string |
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- name: is_biased |
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dtype: bool |
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- name: biased_words |
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dtype: string |
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splits: |
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- name: train |
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num_bytes: 11586577 |
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num_examples: 40000 |
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download_size: 6501927 |
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dataset_size: 11586577 |
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license: afl-3.0 |
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language: |
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- en |
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--- |
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## Dataset Description |
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- **Homepage:** [Clinical Biases Dataset](https://huggingface.co/datasets/shainahub/clinical_bias) |
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### Who is the target audience for this dataset? |
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The target audience includes researchers and practitioners in the healthcare and natural language processing domains interested in studying biases in clinical texts and developing models to detect and mitigate such biases. |
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### What do I need to know to use this dataset? |
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Users should have a basic understanding of clinical texts, biases, and natural language processing. |
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## Data Fields |
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- `SUBJECT_ID`: A unique identifier for the subject. |
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- `TEXT`: The clinical text. |
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- `is_biased`: A boolean indicating whether the text is biased or not. |
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- `biased_words`: A list of biased words present in the text (if any). |
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## Data Splits |
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This dataset does not have predefined data splits (train, validation, test). Users can create their own splits according to their requirements. |
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## Dataset Creation |
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### Curation Rationale |
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The dataset was created to study biases in clinical texts and provide a resource for developing models to detect and mitigate such biases. |
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### Source Data |
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The dataset is derived from clinical texts collected from various sources. |
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### Licensing Information |
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The licensing information for this dataset is not specified. |
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### Previewing the Dataset |
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You can use the following code snippet to preview the dataset using Hugging Face Datasets library in Python: |
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```python |
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from datasets import load_dataset |
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dataset = load_dataset("shainahub/clinical_bias") |
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dataset_dict = dataset["train"][0] |
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print("SUBJECT_ID:", dataset_dict["SUBJECT_ID"]) |
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print("TEXT:", dataset_dict["TEXT"]) |
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print("is_biased:", dataset_dict["is_biased"]) |
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print("biased_words:", dataset_dict["biased_words"]) |
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``` |
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```python |
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from datasets import load_dataset |
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dataset = load_dataset("shainahub/clinical_bias") |
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df = dataset['train'].to_pandas() |
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df.head() |
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``` |
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it will give 40k rows. |
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The output should look like this: |
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```python |
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SUBJECT_ID: 2549 |
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TEXT: CCU NSG TRANSFER SUMMARY UPDATE RESP FAILURE CLINICAL STATUS: Fever Oxygen saturations have been intermittently low on room air with improvement on oxygen High white blood cell count Multifocal pneumonia Gastrointestinal bleeding concerning for stress ulceration Hemodynamically stable on vasopressors, requiring increasing amounts to maintain mean arterial pressure. Heart rate increased to 100s with systolic blood pressure in the 90s. PLAN: 1. Continue current management 2. Initiate prophylaxis for stress ulceration 3. Initiate appropriate isolation for pneumonia |
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is_biased: False |
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biased_words: None |
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``` |
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Loading the Dataset |
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You can use the following code snippet to load the dataset using Hugging Face Datasets library in Python: |
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```python |
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from datasets import load_dataset |
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dataset = load_dataset("shainahub/clinical_bias") |
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``` |
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The dataset consists of four columns: |
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```python |
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SUBJECT_ID: a unique identifier for each clinical note. |
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TEXT: the text of the clinical note |
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is_biased: a boolean value indicating whether the note contains biased language or not |
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biased_words: if the note contains biased language, the words or phrases that are biased |
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``` |
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