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https://api.github.com/repos/huggingface/datasets/issues/3747 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3747/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3747/comments | https://api.github.com/repos/huggingface/datasets/issues/3747/events | https://github.com/huggingface/datasets/issues/3747 | 1,141,688,854 | I_kwDODunzps5EDMoW | 3,747 | Passing invalid subset should throw an error | {
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] | open | false | null | [] | null | [] | 2022-02-17T18:16:11Z | 2022-02-17T18:16:11Z | null | CONTRIBUTOR | null | null | null | ## Describe the bug
Only some datasets have a subset (as in `load_dataset(name, subset)`). If you pass an invalid subset, an error should be thrown.
## Steps to reproduce the bug
```python
import datasets
datasets.load_dataset('rotten_tomatoes', 'asdfasdfa')
```
## Expected results
This should break, since `'asdfasdfa'` isn't a subset of the `rotten_tomatoes` dataset.
## Actual results
This API call silently succeeds. | {
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} | When shuffling in streaming mode, those two entangled lists are shuffled independently. In this PR I changed this to shuffle the lists of same length with the exact same seed, in order for the files and metadata to still be aligned.
```python
gen_kwargs = {
"files": [os.path.join(data_dir, filename) for filename in all_files],
"metadata_files": [all_metadata[filename] for filename in all_files],
}
```
IMO this is important to avoid big but silent issues.
Fix https://github.com/huggingface/datasets/issues/3744 | {
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} | This PR adds the mean Intersection-over-Union metric to the library, useful for tasks like semantic segmentation.
It is entirely based on mmseg's [implementation](https://github.com/open-mmlab/mmsegmentation/blob/master/mmseg/core/evaluation/metrics.py).
I've removed any PyTorch dependency, and rely on Numpy only. | {
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```python
gen_kwargs = {
"files": [os.path.join(data_dir, filename) for filename in all_files],
"metadata_files": [all_metadata[filename] for filename in all_files],
}
```
It happened for Multilingual Spoken Words for example in #3666
However currently **the two lists are shuffled independently** when shuffling the shards in streaming mode. This leads to `_generate_examples` not having the right metadata for each file.
To prevent this issue I suggest that we always shuffle lists of the same length the exact same way to avoid such a big but silent issue.
cc @polinaeterna | {
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I bumped into this particular `ValueError` during my work (because an instance of `np.int64` was passed instead of regular Python `int`), and so I had to `print(type(values))` myself. Apparently, it's just the missing `f` to make message an f-string.
It ain't much for a contribution, but it's honest work. Hope it spares someone else a few seconds in the future 😃 | {
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- [x] Update circle ci yaml
- [x] Delete sphinx static & python files in docs dir
- [x] Update readme in docs dir
- [ ] Update docs config in setup.py | {
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} | [] | closed | false | null | [] | null | [] | 2022-02-17T00:18:22Z | 2022-02-18T14:42:13Z | 2022-02-18T14:42:13Z | CONTRIBUTOR | null | false | {
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} | This PR makes some minor changes to the `pubmed` dataset to allow for `streaming=True`. Fixes #3739.
Basically, I followed the C4 dataset which works in streaming mode as an example, and made the following changes:
* Change URL prefix from `ftp://` to `https://`
* Explicilty `open` the filename and pass the XML contents to `etree.fromstring(xml_str)`
The Github diff tool makes it look like the changes are larger than they are, sorry about that.
I tested locally and the `pubmed` dataset now works in both normal and streaming modes. There is some overhead at the start of each shard in streaming mode as building the XML tree online is quite slow (each pubmed .xml.gz file is ~20MB), but the overhead gets amortized over all the samples in the shard. On my laptop with a single CPU worker I am able to stream at about ~600 samples/s. | {
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https://api.github.com/repos/huggingface/datasets/issues/3739 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3739/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3739/comments | https://api.github.com/repos/huggingface/datasets/issues/3739/events | https://github.com/huggingface/datasets/issues/3739 | 1,140,329,189 | I_kwDODunzps5D-Arl | 3,739 | Pubmed dataset does not work in streaming mode | {
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] | closed | false | null | [] | null | [] | 2022-02-16T17:13:37Z | 2022-02-18T14:42:13Z | 2022-02-18T14:42:13Z | CONTRIBUTOR | null | null | null | ## Describe the bug
Trying to use the `pubmed` dataset with `streaming=True` fails.
## Steps to reproduce the bug
```python
import datasets
pubmed_train = datasets.load_dataset('pubmed', split='train', streaming=True)
print (next(iter(pubmed_train)))
```
## Expected results
I would expect to see the first training sample from the pubmed dataset.
## Actual results
```
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/Users/abhinav/Documents/mosaicml/mosaicml_venv/lib/python3.8/site-packages/datasets/iterable_dataset.py", line 367, in __iter__
for key, example in self._iter():
File "/Users/abhinav/Documents/mosaicml/mosaicml_venv/lib/python3.8/site-packages/datasets/iterable_dataset.py", line 364, in _iter
yield from ex_iterable
File "/Users/abhinav/Documents/mosaicml/mosaicml_venv/lib/python3.8/site-packages/datasets/iterable_dataset.py", line 79, in __iter__
for key, example in self.generate_examples_fn(**self.kwargs):
File "/Users/abhinav/.cache/huggingface/modules/datasets_modules/datasets/pubmed/9715addf10c42a7877a2149ae0c5f2fddabefc775cd1bd9b03ac3f012b86ce46/pubmed.py", line 373, in _generate_examples
tree = etree.parse(filename)
File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/xml/etree/ElementTree.py", line 1202, in parse
tree.parse(source, parser)
File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/xml/etree/ElementTree.py", line 584, in parse
source = open(source, "rb")
FileNotFoundError: [Errno 2] No such file or directory: 'gzip://pubmed21n0001.xml::ftp://ftp.ncbi.nlm.nih.gov/pubmed/baseline/pubmed21n0001.xml.gz'
```
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.18.2
- Platform: macOS-11.4-x86_64-i386-64bit
- Python version: 3.8.2
- PyArrow version: 6.0.0
## Comments
The error looks like an issue with `open` vs. `xopen` inside the `xml` package. It looks like it's trying to open the remote source URL, which has been edited with prefix `gzip://...`.
Maybe there can be an explicit `xopen` before passing the raw data to `etree`, something like:
```python
# Before
tree = etree.parse(filename)
root = tree.getroot()
# After
with xopen(filename) as f:
data_str = f.read()
root = etree.fromstring(data_str)
``` | {
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https://api.github.com/repos/huggingface/datasets/issues/3738 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3738/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3738/comments | https://api.github.com/repos/huggingface/datasets/issues/3738/events | https://github.com/huggingface/datasets/issues/3738 | 1,140,164,253 | I_kwDODunzps5D9Yad | 3,738 | For data-only datasets, streaming and non-streaming don't behave the same | {
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] | open | false | null | [] | null | [] | 2022-02-16T15:20:57Z | 2022-02-21T14:24:55Z | null | CONTRIBUTOR | null | null | null | See https://huggingface.co/datasets/huggingface/transformers-metadata: it only contains two JSON files.
In streaming mode, the files are concatenated, and thus the rows might be dictionaries with different keys:
```python
import datasets as ds
iterable_dataset = ds.load_dataset("huggingface/transformers-metadata", split="train", streaming=True);
rows = list(iterable_dataset.take(100))
rows[0]
# {'model_type': 'albert', 'pytorch': True, 'tensorflow': True, 'flax': True, 'processor': 'AutoTokenizer'}
rows[99]
# {'model_class': 'BartModel', 'pipeline_tag': 'feature-extraction', 'auto_class': 'AutoModel'}
```
In normal mode, an exception is thrown:
```python
import datasets as ds
dataset = ds.load_dataset("huggingface/transformers-metadata", split="train");
```
```
ValueError: Couldn't cast
model_class: string
pipeline_tag: string
auto_class: string
to
{'model_type': Value(dtype='string', id=None), 'pytorch': Value(dtype='bool', id=None), 'tensorflow': Value(dtype='bool', id=None), 'flax': Value(dtype='bool', id=None), 'processor': Value(dtype='string', id=None)}
because column names don't match
``` | {
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https://api.github.com/repos/huggingface/datasets/issues/3737 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3737/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3737/comments | https://api.github.com/repos/huggingface/datasets/issues/3737/events | https://github.com/huggingface/datasets/pull/3737 | 1,140,148,050 | PR_kwDODunzps4y7uFf | 3,737 | Make RedCaps streamable | {
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} | [] | closed | false | null | [] | null | [] | 2022-02-16T15:12:23Z | 2022-02-16T15:28:38Z | 2022-02-16T15:28:37Z | CONTRIBUTOR | null | false | {
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} | Make RedCaps streamable.
@lhoestq Using `data/redcaps_v1.0_annotations.zip` as a download URL gives an error locally when running `datasets-cli test` (will investigate this another time) | {
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https://api.github.com/repos/huggingface/datasets/issues/3736 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3736/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3736/comments | https://api.github.com/repos/huggingface/datasets/issues/3736/events | https://github.com/huggingface/datasets/pull/3736 | 1,140,134,483 | PR_kwDODunzps4y7rMR | 3,736 | Local paths in common voice | {
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} | Continuation of https://github.com/huggingface/datasets/pull/3664:
- pass the `streaming` parameter to _split_generator
- update @anton-l's code to use this parameter for `common_voice`
- add a comment to explain why we use `download_and_extract` in non-streaming and `iter_archive` in streaming
Now the `common_voice` dataset has a local path back in `ds["path"]`, and this field is `None` in streaming mode.
cc @patrickvonplaten @anton-l @albertvillanova
Fix #3663. | {
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https://api.github.com/repos/huggingface/datasets/issues/3735 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3735/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3735/comments | https://api.github.com/repos/huggingface/datasets/issues/3735/events | https://github.com/huggingface/datasets/issues/3735 | 1,140,087,891 | I_kwDODunzps5D9FxT | 3,735 | Performance of `datasets` at scale | {
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} | [] | open | false | null | [] | null | [] | 2022-02-16T14:23:32Z | 2022-03-15T09:15:29Z | null | MEMBER | null | null | null | # Performance of `datasets` at 1TB scale
## What is this?
During the processing of a large dataset I monitored the performance of the `datasets` library to see if there are any bottlenecks. The insights of this analysis could guide the decision making to improve the performance of the library.
## Dataset
The dataset is a 1.1TB extract from GitHub with 120M code files and is stored as 5000 `.json.gz` files. The goal of the preprocessing is to remove duplicates and filter files based on their stats. While the calculating of the hashes for deduplication and stats for filtering can be parallelized the filtering itself is run with a single process. After processing the files are pushed to the hub.
## Machine
The experiment was run on a `m1` machine on GCP with 96 CPU cores and 1.3TB RAM.
## Performance breakdown
- Loading the data **3.5h** (_30sec_ from cache)
- **1h57min** single core loading (not sure what is going on here, corresponds to second progress bar)
- **1h10min** multi core json reading
- **20min** remaining time before and after the two main processes mentioned above
- Process the data **2h** (_20min_ from cache)
- **20min** Getting reading for processing
- **40min** Hashing and files stats (96 workers)
- **58min** Deduplication filtering (single worker)
- Save parquet files **5h**
- Saving 1000 parquet files (16 workers)
- Push to hub **37min**
- **34min** git add
- **3min** git push (several hours with `Repository.git_push()`)
## Conclusion
It appears that loading and saving the data is the main bottleneck at that scale (**8.5h**) whereas processing (**2h**) and pushing the data to the hub (**0.5h**) is relatively fast. To optimize the performance at this scale it would make sense to consider such an end-to-end example and target the bottlenecks which seem to be loading from and saving to disk. The processing itself seems to run relatively fast.
## Notes
- map operation on a 1TB dataset with 96 workers requires >1TB RAM
- map operation does not maintain 100% CPU utilization with 96 workers
- sometimes when the script crashes all the data files have a corresponding `*.lock` file in the data folder (or multiple e.g. `*.lock.lock` when it happened a several times). This causes the cache **not** to be triggered (which is significant at that scale) - i guess because there are new data files
- parallelizing `to_parquet` decreased the saving time from 17h to 5h, however adding more workers at this point had almost no effect. not sure if this is:
a) a bug in my parallelization logic,
b) i/o limit to load data form disk to memory or
c) i/o limit to write from memory to disk.
- Using `Repository.git_push()` was much slower than using command line `git-lfs` - 10-20MB/s vs. 300MB/s! The `Dataset.push_to_hub()` function is even slower as it only uploads one file at a time with only a few MB/s, whereas `Repository.git_push()` pushes files in parallel (each at a similar speed).
cc @lhoestq @julien-c @LysandreJik @SBrandeis
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https://api.github.com/repos/huggingface/datasets/issues/3734 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3734/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3734/comments | https://api.github.com/repos/huggingface/datasets/issues/3734/events | https://github.com/huggingface/datasets/pull/3734 | 1,140,050,336 | PR_kwDODunzps4y7ZU2 | 3,734 | Fix bugs in NewsQA dataset | {
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NewsQA dataset has the following bugs:
- the field `validated_answers` is an exact copy of the field `answers` but with the addition of `'count': [0]` to each dict
- the field `badQuestion` does not appear in `answers` nor `validated_answers`
## Steps to reproduce the bug
By inspecting the dataset script we can see that:
- the parsing of `validated_answers` is a copy-paste of the one for `answers`
- the `badQuestion` field is ignored in the parsing of both `answers` and `validated_answers`
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] | null | [] | 2022-02-16T05:11:08Z | 2022-02-16T20:05:06Z | 2022-02-16T08:48:46Z | NONE | null | null | null | ## Describe the bug
When using the load_dataset function from datasets module to load the Multi-News dataset, does not load the dataset but throws Checksum Error instead.
## Steps to reproduce the bug
```python
from datasets import load_dataset
dataset = load_dataset("multi_news")
```
## Expected results
Should download and load Multi-News dataset.
## Actual results
Throws the following error and cannot load data successfully:
```
NonMatchingChecksumError: Checksums didn't match for dataset source files:
['https://drive.google.com/uc?export=download&id=1vRY2wM6rlOZrf9exGTm5pXj5ExlVwJ0C']
```
Could this issue please be looked at? Thanks! | {
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] | null | [] | 2022-02-16T01:13:31Z | 2022-03-15T16:16:09Z | 2022-03-15T16:16:09Z | NONE | null | null | null | ## Describe the bug
when I use load_dataset to read a txt file I find that the number of the samples is incorrect
## Steps to reproduce the bug
```
fr = open('train.txt','r',encoding='utf-8').readlines()
print(len(fr)) # 1199637
datasets = load_dataset('text', data_files={'train': ['train.txt']}, streaming=False)
print(len(datasets['train'])) # 1199649
```
I also use command line operation to verify it
```
$ wc -l train.txt
1199637 train.txt
```
## Expected results
please fix that issue
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.8.3
- Platform:windows&linux
- Python version:3.7
- PyArrow version:6.0.1
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- **Name:** VoxPopuli
- **Description:** A Large-Scale Multilingual Speech Corpus
- **Paper:** https://arxiv.org/pdf/2101.00390.pdf
- **Data:** https://github.com/facebookresearch/voxpopuli
- **Motivation:** one of the largest (if not the largest) multilingual speech corpus: 400K hours of multilingual unlabeled speech + 17k hours of labeled speech
Instructions to add a new dataset can be found [here](https://github.com/huggingface/datasets/blob/master/ADD_NEW_DATASET.md).
👀 @kahne @Molugan
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However those are only a subset of all the module attributes in its namespace (`__dict__` variable).
This PR fixes the problem of modules that have non-None `__all__` variable, but try to access an attribute present in `__dict__` (and not in `__all__`).
For example, `pandas` has attribute `__version__` only present in `__dict__`.
- Before version 1.4, pandas `__all__` was None, thus all attributes in `__dict__` were patched
- From version 1.4, pandas `__all__` is not None, thus attributes in `__dict__` not present in `__all__` are ignored
Fix #3724.
CC: @severo @lvwerra | {
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Related to #3724. | {
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If we upgrade to pandas `1.4`, the patching of the pandas module is no longer working
```
AttributeError: '_PatchedModuleObj' object has no attribute '__version__'
```
## Steps to reproduce the bug
```
pip install pandas==1.4
```
```python
from datasets import load_dataset
ds = load_dataset("lvwerra/red-wine", split="train", streaming=True)
item = next(iter(ds))
item
```
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Inspired by `cast`/`table_cast`, I've introduced a `table_flatten` function to handle the Image/Audio types.
CC: @SBrandeis
Fix #3686.
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} | Per #3716 , current implementation does not take into consideration that `faiss` can run on multiple GPUs.
In this commit, I provided multi-GPU support for `FaissIndex` by modifying the device management in `IndexableMixin.add_faiss_index` and `FaissIndex.load`.
Now users are able to pass in
1. a positive integer (as usual) to use 1 GPU
2. a negative integer `-1` to use all GPUs
3. a list of integers e.g. `[0, 1]` to run only on those GPUs
4. Of course, passing in nothing still runs on CPU.
This closes: #3716 | {
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] | open | false | null | [] | null | [] | 2022-02-14T16:21:41Z | 2022-02-15T14:31:27Z | null | NONE | null | null | null | Missing language in Common Voice dataset
**Link:** https://huggingface.co/datasets/common_voice
I tried to call the Urdu dataset using `load_dataset("common_voice", "ur", split="train+validation")` but couldn't due to builder configuration not found. I checked the source file here for the languages support:
https://github.com/huggingface/datasets/blob/master/datasets/common_voice/common_voice.py
and Urdu isn't included there. I assume a quick update will fix the issue as Urdu speech is now available at the Common Voice dataset.
Am I the one who added this dataset? No
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} | Fix #3707
Instead of reusing `_check_valid_index_key` from `datasets.formatting`, I defined a new function to provide a more meaningful error message.
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} | This PR:
- fixes a bug in the script, by removing an unnamed column with the row index: fix KeyError
- fix the metadata JSON, by adding both configurations (1.1 and 2.0): fix ExpectedMoreDownloadedFiles
- updates the dataset card
Fix #3515. | {
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] | closed | false | null | [] | null | [] | 2022-02-14T11:44:35Z | 2022-02-14T15:09:36Z | 2022-02-14T15:07:43Z | NONE | null | null | null | ## Describe the bug
The `encode_example` function in *features.py* seems to have a wrong condition.
```python
if not -1 <= example_data < self.num_classes:
raise ValueError(f"Class label {example_data:d} greater than configured num_classes {self.num_classes}")
```
## Expected results
The `not - 1` condition change the result of the condition. For instance, if `example_data` equals 4 and ` self.num_classes` equals 4 too, `example_data < self.num_classes` will give `False` as expected . But if i add the `not - 1` condition, `not -1 <= example_data < self.num_classes` will give `True` and raise an exception.
## Environment info
- `datasets` version: 1.18.3
- Python version: 3.8.10
- PyArrow version: 7.00
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Currently, because `device` is of the type `int | None`, to leverage `faiss-gpu`'s multi-gpu support, you need to create a `custom_index`. However, if using a `custom_index` created by e.g. `faiss.index_cpu_to_all_gpus`, then `FaissIndex.save` does not work properly because it checks the device id (which is an int, so no multiple GPUs).
**Describe the solution you'd like**
I would like `FaissIndex` to support multiple GPUs, by passing in a list to `add_faiss_index`.
**Describe alternatives you've considered**
Alternatively, I would like it to at least provide a warning cause it wasn't the behavior that I expected.
**Additional context**
Relavent source code here:
https://github.com/huggingface/datasets/blob/6ed6ac9448311930557810383d2cfd4fe6aae269/src/datasets/search.py#L340-L349
Device management needs changing to support multiple GPUs, probably by `isinstance` calls.
I can provide a PR if you like :)
Thanks for reading!
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} | The last version has many problems,
1) Errors in table load-in. Split by a single comma instead of using pandas is wrong.
2) id reduplicated in _generate_examples function.
3) Missing information of history questions which make it hard to use.
I fix it refer to https://github.com/HKUNLP/UnifiedSKG. And we test it to perform normally. | {
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**Link:** https://huggingface.co/datasets/Helsinki-NLP/tatoeba_mt
My data loader script does not seem to work.
The files are part of the local repository but cannot be found. An example where it should work is the subset for "afr-eng".
Another problem is that I do not have validation data for all subsets and I don't know how to properly check whether validation exists in the configuration before I try to download it. An example is the subset for "afr-deu".
Am I the one who added this dataset ? Yes
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} | Checklist
- [x] Update circle ci yaml
- [x] Delete sphinx static & python files in docs dir
- [x] Update readme in docs dir
- [ ] Update docs config in setup.py | {
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cc @polinaeterna this will be useful if we have audio datasets that are canonical and for which you'd like to host data files | {
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] | open | false | null | [] | null | [] | 2022-02-11T18:50:48Z | 2022-10-13T13:18:38Z | null | MEMBER | null | null | null | ## Describe the bug
Loading a JSON dataset with `load_dataset` can get stuck when running on a machine with many CPUs. This is especially an issue when loading a large dataset on a large machine.
## Steps to reproduce the bug
I originally created the following script to reproduce the issue:
```python
from datasets import load_dataset
from multiprocessing import Process
from tqdm import tqdm
import datasets
from transformers import set_seed
def run_tasks_in_parallel(tasks, ds_list):
for _ in tqdm(range(1000)):
print('new batch')
running_tasks = [Process(target=task, args=(ds, i)) for i, (task, ds) in enumerate(zip(tasks, ds_list))]
for running_task in running_tasks:
running_task.start()
for running_task in running_tasks:
running_task.join()
def get_dataset():
dataset_name = 'transformersbook/codeparrot'
ds = load_dataset(dataset_name+'-train', split="train", streaming=True)
ds = ds.shuffle(buffer_size=1000, seed=1)
return iter(ds)
def get_next_element(ds, process_id, N=10000):
for _ in range(N):
_ = next(ds)['content']
print(f'process {process_id} done')
return
set_seed(1)
datasets.utils.logging.set_verbosity_debug()
n_processes = 8
tasks = [get_next_element for _ in range(n_processes)]
args = [get_dataset() for _ in range(n_processes)]
run_tasks_in_parallel(tasks, args)
```
Today I noticed that it can happen when running it on a single process on a machine with many cores without streaming. So just `load_dataset("transformersbook/codeparrot-train")` alone might cause the issue after waiting long enough or trying many times. It's a slightly random process which makes it especially hard to track down. When I encountered it today it had already processed 17GB of data (the size of the cache folder when it got stuck) before getting stuck.
Here's my current understanding of the error. As far as I can tell it happens in the following block: https://github.com/huggingface/datasets/blob/be701e9e89ab38022612c7263edc015bc7feaff9/src/datasets/packaged_modules/json/json.py#L119-L139
When the try on line 121 fails and the `block_size` is increased it can happen that it can't read the JSON again and gets stuck indefinitely. A hint that points in that direction is that increasing the `chunksize` argument decreases the chance of getting stuck and vice versa. Maybe it is an issue with a lock on the file that is not properly released.
## Expected results
Read a JSON before the end of the universe.
## Actual results
Read a JSON not before the end of the universe.
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.18.3
- Platform: Linux-4.19.0-18-cloud-amd64-x86_64-with-glibc2.28
- Python version: 3.9.10
- PyArrow version: 7.0.0
@lhoestq we dicsussed this a while ago. @albertvillanova we discussed this today :)
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] | null | [] | 2022-02-11T15:20:01Z | 2022-02-14T19:19:21Z | 2022-02-14T19:19:21Z | NONE | null | null | null | ## Describe the bug
The `.select` method will not throw when sending `indices` bigger than the dataset length; `indices` will be wrapped instead. This behavior is not documented anywhere, and is not intuitive.
## Steps to reproduce the bug
```python
from datasets import Dataset
ds = Dataset.from_dict({"text": ["d", "e", "f"], "label": [4, 5, 6]})
res1 = ds.select([1, 2, 3])['text']
res2 = ds.select([1000])['text']
```
## Expected results
Both results should throw an `Error`.
## Actual results
`res1` will give `['e', 'f', 'd']`
`res2` will give `['e']`
## Environment info
Bug found from this environment:
- `datasets` version: 1.16.1
- Platform: macOS-10.16-x86_64-i386-64bit
- Python version: 3.8.7
- PyArrow version: 6.0.1
It was also replicated on `master`.
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https://api.github.com/repos/huggingface/datasets/issues/3706 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3706/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3706/comments | https://api.github.com/repos/huggingface/datasets/issues/3706/events | https://github.com/huggingface/datasets/issues/3706 | 1,132,218,874 | I_kwDODunzps5DfEn6 | 3,706 | Unable to load dataset 'big_patent' | {
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] | closed | false | null | [] | null | [] | 2022-02-11T09:48:34Z | 2022-02-14T15:26:03Z | 2022-02-14T15:26:03Z | NONE | null | null | null | ## Describe the bug
Unable to load the "big_patent" dataset
## Steps to reproduce the bug
```python
load_dataset('big_patent', 'd', 'validation')
```
## Expected results
Download big_patents' validation split from the 'd' subset
## Getting an error saying:
{FileNotFoundError}Local file ..\huggingface\datasets\downloads\6159313604f4f2c01e7d1cac52139343b6c07f73f6de348d09be6213478455c5\bigPatentData\train.tar.gz doesn't exist
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version:1.18.3
- Platform: Windows
- Python version:3.8
- PyArrow version:7.0.0
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https://api.github.com/repos/huggingface/datasets/issues/3705 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3705/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3705/comments | https://api.github.com/repos/huggingface/datasets/issues/3705/events | https://github.com/huggingface/datasets/pull/3705 | 1,132,053,226 | PR_kwDODunzps4yfhyj | 3,705 | Raise informative error when loading a save_to_disk dataset | {
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} | People recurrently report error when trying to load a dataset (using `load_dataset`) that was previously saved using `save_to_disk`.
This PR raises an informative error message telling them they should use `load_from_disk` instead.
Close #3700. | {
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https://api.github.com/repos/huggingface/datasets/issues/3704 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3704/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3704/comments | https://api.github.com/repos/huggingface/datasets/issues/3704/events | https://github.com/huggingface/datasets/issues/3704 | 1,132,042,631 | I_kwDODunzps5DeZmH | 3,704 | OSCAR-2109 datasets are misaligned and truncated | {
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] | closed | false | null | [] | null | [] | 2022-02-11T08:14:59Z | 2022-03-17T18:01:04Z | 2022-03-16T16:21:28Z | NONE | null | null | null | ## Describe the bug
The `oscar-corpus/OSCAR-2109` data appears to be misaligned and truncated by the dataset builder for subsets that contain more than one part and for cases where the texts contain non-unix newlines.
## Steps to reproduce the bug
A few examples, although I'm not sure how deterministic the particular (mis)alignment is in various configurations:
```python
from datasets import load_dataset
dataset = load_dataset("oscar-corpus/OSCAR-2109", "deduplicated_fi", split="train", use_auth_token=True)
entry = dataset[0]
# entry["text"] is from fi_part_3.txt.gz
# entry["meta"] is from fi_meta_part_2.jsonl.gz
dataset = load_dataset("oscar-corpus/OSCAR-2109", "deduplicated_no", split="train", use_auth_token=True)
entry = dataset[900000]
# entry["text"] is from no_part_3.txt.gz and contains a blank line
# entry["meta"] is from no_meta_part_1.jsonl.gz
dataset = load_dataset("oscar-corpus/OSCAR-2109", "deduplicated_mk", split="train", streaming=True, use_auth_token=True)
# 9088 texts in the dataset are empty
```
For `deduplicated_fi`, all exported raw texts from the dataset are 17GB rather than 20GB as reported in the data splits overview table. The token count with `wc -w` for the raw texts is 2,067,556,874 rather than the expected 2,357,264,196 from the data splits table.
For `deduplicated_no` all exported raw texts contain 624,040,887 rather than the expected 776,354,517 tokens.
For `deduplicated_mk` it is 122,236,936 rather than 134,544,934 tokens.
I'm not expecting the `wc -w` counts to line up exactly with the data splits table, but for comparison the `wc -w` count for `deduplicated_mk` on the raw texts is 134,545,424.
## Issues
* The meta / text files are not paired correctly when loading, so the extracted texts do not have the right offsets, the metadata is not associated with the correct text, and the text files may not be processed to the end or may be processed beyond the end (empty texts).
* The line count offset is not reset per file so the texts aren't aligned to the right offsets in any parts beyond the first part, leading to truncation when in effect blank lines are not skipped.
* Non-unix newline characters are treated as newlines when reading the text files while the metadata only counts unix newlines for its line offsets, leading to further misalignments between the metadata and the extracted texts, and which also results in truncation.
## Expected results
All texts from the OSCAR release are extracted according to the metadata and aligned with the correct metadata.
## Fixes
Not necessarily the exact fixes/checks you may want to use (I didn't test all languages or do any cross-platform testing, I'm not sure all the details are compatible with streaming), however to highlight the issues:
```diff
diff --git a/OSCAR-2109.py b/OSCAR-2109.py
index bbac1076..5eee8de7 100644
--- a/OSCAR-2109.py
+++ b/OSCAR-2109.py
@@ -20,6 +20,7 @@
import collections
import gzip
import json
+import os
import datasets
@@ -387,9 +388,20 @@ class Oscar2109(datasets.GeneratorBasedBuilder):
with open(checksum_file, encoding="utf-8") as f:
data_filenames = [line.split()[1] for line in f if line]
data_urls = [self.config.base_data_path + data_filename for data_filename in data_filenames]
- text_files = dl_manager.download([url for url in data_urls if url.endswith(".txt.gz")])
- metadata_files = dl_manager.download([url for url in data_urls if url.endswith(".jsonl.gz")])
+ # sort filenames so corresponding parts are aligned
+ text_files = sorted(dl_manager.download([url for url in data_urls if url.endswith(".txt.gz")]))
+ metadata_files = sorted(dl_manager.download([url for url in data_urls if url.endswith(".jsonl.gz")]))
+ assert len(text_files) == len(metadata_files)
metadata_and_text_files = list(zip(metadata_files, text_files))
+ for meta_path, text_path in metadata_and_text_files:
+ # check that meta/text part numbers are the same
+ if "part" in os.path.basename(text_path):
+ assert (
+ os.path.basename(text_path).replace(".txt.gz", "").split("_")[-1]
+ == os.path.basename(meta_path).replace(".jsonl.gz", "").split("_")[-1]
+ )
+ else:
+ assert len(metadata_and_text_files) == 1
return [
datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={"metadata_and_text_files": metadata_and_text_files}),
]
@@ -397,10 +409,14 @@ class Oscar2109(datasets.GeneratorBasedBuilder):
def _generate_examples(self, metadata_and_text_files):
"""This function returns the examples in the raw (text) form by iterating on all the files."""
id_ = 0
- offset = 0
for meta_path, text_path in metadata_and_text_files:
+ # line offsets are per text file
+ offset = 0
logger.info("generating examples from = %s", text_path)
- with gzip.open(open(text_path, "rb"), "rt", encoding="utf-8") as text_f:
+ # some texts contain non-Unix newlines that should not be
+ # interpreted as line breaks for the line counts in the metadata
+ # with readline()
+ with gzip.open(open(text_path, "rb"), "rt", encoding="utf-8", newline="\n") as text_f:
with gzip.open(open(meta_path, "rb"), "rt", encoding="utf-8") as meta_f:
for line in meta_f:
# read meta
@@ -411,7 +427,12 @@ class Oscar2109(datasets.GeneratorBasedBuilder):
offset += 1
text_f.readline()
# read text
- text = "".join([text_f.readline() for _ in range(meta["nb_sentences"])]).rstrip()
+ text_lines = [text_f.readline() for _ in range(meta["nb_sentences"])]
+ # all lines contain text (no blank lines or EOF)
+ assert all(text_lines)
+ assert "\n" not in text_lines
offset += meta["nb_sentences"]
+ # only strip the trailing newline
+ text = "".join(text_lines).rstrip("\n")
yield id_, {"id": id_, "text": text, "meta": meta}
id_ += 1
```
I've tested this with a number of smaller deduplicated languages with 1-20 parts and the resulting datasets looked correct in terms of word count and size when compared to the data splits table and raw texts, and the text/metadata alignments were correct in all my spot checks. However, there are many many languages I didn't test and I'm not sure that there aren't any texts containing blank lines in the corpus, for instance. For the cases I tested, the assertions related to blank lines and EOF made it easier to verify that the text and metadata were aligned as intended, since there would be little chance of spurious alignments of variable-length texts across so much data. | {
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https://api.github.com/repos/huggingface/datasets/issues/3703 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3703/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3703/comments | https://api.github.com/repos/huggingface/datasets/issues/3703/events | https://github.com/huggingface/datasets/issues/3703 | 1,131,882,772 | I_kwDODunzps5DdykU | 3,703 | ImportError: To be able to use this metric, you need to install the following dependencies['seqeval'] using 'pip install seqeval' for instance' | {
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} | [] | open | false | null | [] | null | [] | 2022-02-11T06:38:42Z | 2022-03-21T12:53:25Z | null | NONE | null | null | null | hi :
I want to use the seqeval indicator because of direct load_ When metric ('seqeval '), it will prompt that the network connection fails. So I downloaded the seqeval Py to load locally. Loading code: metric = load_ metric(path='mymetric/seqeval/seqeval.py')
But tips:
Traceback (most recent call last):
File "/home/ubuntu/Python3.6_project/zyf_project/transformers/examples/pytorch/token-classification/run_ner.py", line 604, in <module>
main()
File "/home/ubuntu/Python3.6_project/zyf_project/transformers/examples/pytorch/token-classification/run_ner.py", line 481, in main
metric = load_metric(path='mymetric/seqeval/seqeval.py')
File "/home/ubuntu/Python3.6_project/zyf_project/transformers_venv_0209/lib/python3.7/site-packages/datasets/load.py", line 610, in load_metric
dataset=False,
File "/home/ubuntu/Python3.6_project/zyf_project/transformers_venv_0209/lib/python3.7/site-packages/datasets/load.py", line 450, in prepare_module
f"To be able to use this {module_type}, you need to install the following dependencies"
ImportError: To be able to use this metric, you need to install the following dependencies['seqeval'] using 'pip install seqeval' for instance'
**What should I do? Please help me, thank you**
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} | Until we manage to support ES 8.0, I'm setting the version to `<8.0.0`
Currently we're getting this error on 8.0:
```python
ValueError: Either 'hosts' or 'cloud_id' must be specified
```
When instantiating a `Elasticsearch()` object | {
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Unable to load a dataset from Huggingface that I have just saved.
## Steps to reproduce the bug
On Google colab
`! pip install datasets `
`from datasets import load_dataset`
`my_path = "wiki_dataset"`
`dataset = load_dataset('wikipedia', "20200501.fr")`
`dataset.save_to_disk(my_path)`
`dataset = load_dataset(my_path)`
## Expected results
Loading the dataset
## Actual results
ValueError: Couldn't cast
_data_files: list<item: struct<filename: string>>
child 0, item: struct<filename: string>
child 0, filename: string
_fingerprint: string
_format_columns: null
_format_kwargs: struct<>
_format_type: null
_indexes: struct<>
_output_all_columns: bool
_split: string
to
{'builder_name': Value(dtype='string', id=None), 'citation': Value(dtype='string', id=None), 'config_name': Value(dtype='string', id=None), 'dataset_size': Value(dtype='int64', id=None), 'description': Value(dtype='string', id=None), 'download_checksums': {}, 'download_size': Value(dtype='int64', id=None), 'features': {'title': {'dtype': Value(dtype='string', id=None), 'id': Value(dtype='null', id=None), '_type': Value(dtype='string', id=None)}, 'text': {'dtype': Value(dtype='string', id=None), 'id': Value(dtype='null', id=None), '_type': Value(dtype='string', id=None)}}, 'homepage': Value(dtype='string', id=None), 'license': Value(dtype='string', id=None), 'post_processed': Value(dtype='null', id=None), 'post_processing_size': Value(dtype='null', id=None), 'size_in_bytes': Value(dtype='int64', id=None), 'splits': {'train': {'name': Value(dtype='string', id=None), 'num_bytes': Value(dtype='int64', id=None), 'num_examples': Value(dtype='int64', id=None), 'dataset_name': Value(dtype='string', id=None)}}, 'supervised_keys': Value(dtype='null', id=None), 'task_templates': Value(dtype='null', id=None), 'version': {'version_str': Value(dtype='string', id=None), 'description': Value(dtype='string', id=None), 'major': Value(dtype='int64', id=None), 'minor': Value(dtype='int64', id=None), 'patch': Value(dtype='int64', id=None)}}
because column names don't match
## Environment info
- `datasets` version: 1.18.3
- Platform: Linux-5.4.144+-x86_64-with-Ubuntu-18.04-bionic
- Python version: 3.7.12
- PyArrow version: 6.0.1
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Fix #413. | {
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Fix #3630. | {
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} | Currently, `names_file` is a field of the data class `ClassLabel`, thus appearing when transforming it to dict (when saving infos). Afterwards, when trying to read it from infos, it conflicts with the other field `names`.
This PR, removes `names_file` as a field of the data class `ClassLabel`.
- it is only used at instantiation to generate the `labels` field
Fix #3631. | {
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} | Upgrades the `datasets` library quality tool `black` to use the first stable release of `black`, version 22.0. | {
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https://api.github.com/repos/huggingface/datasets/issues/3690 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3690/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3690/comments | https://api.github.com/repos/huggingface/datasets/issues/3690/events | https://github.com/huggingface/datasets/pull/3690 | 1,127,493,538 | PR_kwDODunzps4yP2p5 | 3,690 | Update docs to new frontend/UI | {
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} | ### TLDR: Update `datasets` `docs` to the new syntax (markdown and mdx files) & frontend (as how it looks on [hf.co/transformers](https://huggingface.co/docs/transformers/index))
| Light mode | Dark mode |
|-----------------------------------------------------------------------------------------------------|--------------------------------------------------------------------------------|
| <img width="400" alt="Screenshot 2022-02-17 at 14 15 34" src="https://user-images.githubusercontent.com/11827707/154489358-e2fb3708-8d72-4fb6-93f0-51d4880321c0.png"> | <img width="400" alt="Screenshot 2022-02-17 at 14 16 27" src="https://user-images.githubusercontent.com/11827707/154489596-c5a1311b-181c-4341-adb3-d60a7d3abe85.png"> |
## Checklist
- [x] update datasets docs to new syntax (should call `doc-builder convert`) (this PR)
- [x] discuss `@property` methods frontend https://github.com/huggingface/doc-builder/pull/87
- [x] discuss `inject_arrow_table_documentation` (this PR) https://github.com/huggingface/datasets/pull/3690#discussion_r801847860
- [x] update datasets docs path on moon-landing https://github.com/huggingface/moon-landing/pull/2089
- [x] convert pyarrow docstring from Numpydoc style to groups style https://github.com/huggingface/doc-builder/pull/89(https://stackoverflow.com/a/24385103/6558628)
- [x] handle `Raises` section on frontend and doc-builder https://github.com/huggingface/doc-builder/pull/86
- [x] check imgs path (this PR) (nothing to update here)
- [x] doc exaples block has to follow format `Examples::` https://github.com/huggingface/datasets/pull/3693
- [x] fix [this docstring](https://github.com/huggingface/datasets/blob/6ed6ac9448311930557810383d2cfd4fe6aae269/src/datasets/arrow_dataset.py#L3339) (causing svelte compilation error)
- [x] Delete sphinx related files
- [x] Delete sphinx CI
- [x] Update docs config in setup.py
- [x] add `versions.yml` in doc-build https://github.com/huggingface/doc-build/pull/1
- [x] add `versions.yml` in doc-build-dev https://github.com/huggingface/doc-build-dev/pull/1
- [x] https://github.com/huggingface/moon-landing/pull/2089
- [x] format docstrings for example `datasets.DatasetBuilder.download_and_prepare` args format look wrong
- [x] create new github actions. (can probably be in a separate PR) (see the transformers equivalents below)
1. [build_dev_documentation.yml](https://github.com/huggingface/transformers/blob/master/.github/workflows/build_dev_documentation.yml)
2. [build_documentation.yml](https://github.com/huggingface/transformers/blob/master/.github/workflows/build_documentation.yml)
3. [delete_dev_documentation.yml](https://github.com/huggingface/transformers/blob/master/.github/workflows/delete_dev_documentation.yml)
## Note to reviewers
The number of changed files is a lot (100+) because I've converted all `.rst` files to `.mdx` files & they are compiling fine on the svelte side (also, moved all the imgs to to [doc-imgs repo](https://huggingface.co/datasets/huggingface/documentation-images/tree/main/datasets)). Moreover, you should just review them on preprod and see if the rendering look fine.
_Therefore, I'd suggest to focus on the changed_ **`.py`** and **CI files** (github workflows, etc. you can use [this filter here](https://github.com/huggingface/datasets/pull/3690/files?file-filters%5B%5D=.py&file-filters%5B%5D=.yml&show-deleted-files=true&show-viewed-files=true)) during the review & ignore `.mdx` files. (if there's a bug in `.mdx` files, we can always handle it in a separate PR afterwards). | {
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} | Some servers do not support HTTP range requests, whereas this is required to stream some file formats (like ZIP).
~~This PR implements a workaround for those cases, by download the files locally in a temporary directory (cleaned up by the OS once the process is finished).~~
This PR raises custom error explaining that streaming is not possible because data host server does not support HTTP range requests.
Fix #3677. | {
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I installed datasets(version 1.17.0, 1.18.0, 1.18.3) but i'm right now nor able to import it because of pyarrow. when i try to import it, i get the following error:
`To use datasets, the module pyarrow>=3.0.0 is required, and the current version of pyarrow doesn't match this condition`.
i tryed with all version of pyarrow execpt `4.0.0` but still get the same error.
## Steps to reproduce the bug
```python
import datasets
```
## Expected results
A clear and concise description of the expected results.
## Actual results
AttributeError Traceback (most recent call last)
<ipython-input-19-652e886d387f> in <module>
----> 1 import datasets
~\AppData\Local\Continuum\anaconda3\lib\site-packages\datasets\__init__.py in <module>
26
27
---> 28 if _version.parse(pyarrow.__version__).major < 3:
29 raise ImportWarning(
30 "To use `datasets`, the module `pyarrow>=3.0.0` is required, and the current version of `pyarrow` doesn't match this condition.\n"
AttributeError: 'Version' object has no attribute 'major'
## Environment info
Traceback (most recent call last):
File "c:\users\alex\appdata\local\continuum\anaconda3\lib\runpy.py", line 193, in _run_module_as_main
"__main__", mod_spec)
File "c:\users\alex\appdata\local\continuum\anaconda3\lib\runpy.py", line 85, in _run_code
exec(code, run_globals)
File "C:\Users\Alex\AppData\Local\Continuum\anaconda3\Scripts\datasets-cli.exe\__main__.py", line 5, in <module>
File "c:\users\alex\appdata\local\continuum\anaconda3\lib\site-packages\datasets\__init__.py", line 28, in <module>
if _version.parse(pyarrow.__version__).major < 3:
AttributeError: 'Version' object has no attribute 'major'
- `datasets` version:
- Platform: Linux(Ubuntu) and Windows: conda on the both
- Python version: 3.7
- PyArrow version: 7.0.0
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] | null | [] | 2022-02-08T11:52:10Z | 2022-12-06T20:17:16Z | null | NONE | null | null | null | I am working with the SST2 dataset, and am using TensorFlow 2.5
I'd like to convert it to a `tf.data.Dataset` by calling the `to_tf_dataset` method.
The following snippet is what I am using to achieve this:
```
from datasets import load_dataset
from transformers import DefaultDataCollator
data_collator = DefaultDataCollator(return_tensors="tf")
dataset = load_dataset("sst")
train_dataset = dataset["train"].to_tf_dataset(columns=['sentence'], label_cols="label", shuffle=True, batch_size=8,collate_fn=data_collator)
```
However, this only gets me the labels; the text--the most important part--is missing:
```
for s in train_dataset.take(1):
print(s) #prints something like: ({}, <tf.Tensor: shape=(8,), ...>)
```
As you can see, it only returns the label part, not the data, as indicated by the empty dictionary, `{}`. So far, I've played with various settings of the method arguments, but to no avail; I do not want to perform any text processing at this time. On my quest to achieve what I want ( a `tf.data.Dataset`), I've consulted these resources:
[https://www.philschmid.de/huggingface-transformers-keras-tf](https://www.philschmid.de/huggingface-transformers-keras-tf)
[https://huggingface.co/docs/datasets/use_dataset.html?highlight=tensorflow](https://huggingface.co/docs/datasets/use_dataset.html?highlight=tensorflow)
I was surprised to not find more extensive examples on how to transform a Hugginface dataset to one compatible with TensorFlow.
If you could point me to where I am going wrong, please do so.
Thanks in advance for your support.
---
Edit: In the [docs](https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.to_tf_dataset), I found the following description:
_In general, only columns that the model can use as input should be included here (numeric data only)._
Does this imply that no textual, i.e., `string` data can be loaded?
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] | null | [] | 2022-02-08T11:33:48Z | 2022-03-18T17:28:13Z | 2022-03-18T17:28:13Z | CONTRIBUTOR | null | null | null | ## Describe the bug
(`Dataset.flatten`)[https://github.com/huggingface/datasets/blob/master/src/datasets/arrow_dataset.py#L1265] fails for columns with feature (`Translation`)[https://github.com/huggingface/datasets/blob/3edbeb0ec6519b79f1119adc251a1a6b379a2c12/src/datasets/features/translation.py#L8]
## Steps to reproduce the bug
```python
from datasets import load_dataset
dataset = load_dataset("europa_ecdc_tm", "en2fr", split="train[:10]")
print(dataset.features)
# {'translation': Translation(languages=['en', 'fr'], id=None)}
print(dataset[0])
# {'translation': {'en': 'Vaccination against hepatitis C is not yet available.', 'fr': 'Aucune vaccination contre l’hépatite C n’est encore disponible.'}}
dataset.flatten()
```
## Expected results
`dataset.flatten` should flatten the `Translation` column as if it were a dict of `Value("string")`
```python
dataset[0]
# {'translation.en': 'Vaccination against hepatitis C is not yet available.', 'translation.fr': 'Aucune vaccination contre l’hépatite C n’est encore disponible.' }
dataset.features
# {'translation.en': Value("string"), 'translation.fr': Value("string")}
```
## Actual results
```python
In [31]: dset.flatten()
---------------------------------------------------------------------------
KeyError Traceback (most recent call last)
<ipython-input-31-bb88eb5276ee> in <module>
----> 1 dset.flatten()
[...]\site-packages\datasets\fingerprint.py in wrapper(*args, **kwargs)
411 # Call actual function
412
--> 413 out = func(self, *args, **kwargs)
414
415 # Update fingerprint of in-place transforms + update in-place history of transforms
[...]\site-packages\datasets\arrow_dataset.py in flatten(self, new_fingerprint, max_depth)
1294 break
1295 dataset.info.features = self.features.flatten(max_depth=max_depth)
-> 1296 dataset._data = update_metadata_with_features(dataset._data, dataset.features)
1297 logger.info(f'Flattened dataset from depth {depth} to depth {1 if depth + 1 < max_depth else "unknown"}.')
1298 dataset._fingerprint = new_fingerprint
[...]\site-packages\datasets\arrow_dataset.py in update_metadata_with_features(table, features)
534 def update_metadata_with_features(table: Table, features: Features):
535 """To be used in dataset transforms that modify the features of the dataset, in order to update the features stored in the metadata of its schema."""
--> 536 features = Features({col_name: features[col_name] for col_name in table.column_names})
537 if table.schema.metadata is None or b"huggingface" not in table.schema.metadata:
538 pa_metadata = ArrowWriter._build_metadata(DatasetInfo(features=features))
[...]\site-packages\datasets\arrow_dataset.py in <dictcomp>(.0)
534 def update_metadata_with_features(table: Table, features: Features):
535 """To be used in dataset transforms that modify the features of the dataset, in order to update the features stored in the metadata of its schema."""
--> 536 features = Features({col_name: features[col_name] for col_name in table.column_names})
537 if table.schema.metadata is None or b"huggingface" not in table.schema.metadata:
538 pa_metadata = ArrowWriter._build_metadata(DatasetInfo(features=features))
KeyError: 'translation.en'
```
## Environment info
- `datasets` version: 1.18.3
- Platform: Windows-10-10.0.19041-SP0
- Python version: 3.7.10
- PyArrow version: 3.0.0
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The idea is to remove local path information and store file content under "bytes" in the Arrow table before the push.
My initial approach (https://github.com/huggingface/datasets/commit/34c652afeff9686b6b8bf4e703c84d2205d670aa) was to use a map transform similar to [`decode_nested_example`](https://github.com/huggingface/datasets/blob/5e0f6068741464f833ff1802e24ecc2064aaea9f/src/datasets/features/features.py#L1023-L1056) while having decoding turned off, but I wasn't satisfied with the code quality, so I ended up using the `temporary_assignment` decorator to override `cast_storage`, which allows me to directly modify the underlying storage (the final op is similar to `Dataset.cast`) and results in a much simpler code.
Additionally, I added the `allow_cast` flag that can disable this behavior in the situations where it's not needed (e.g. the dataset is already in the correct format for the Hub, etc.)
EDIT:
`allow_cast` renamed to `embed_external_files` | {
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Adding ToLD-Br. Feel free to ask for modifications.
Thanks!! | {
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I'm adding our dataset from our paper published at AACL 2020. Feel free to ask for modifications.
Thanks! | {
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CC: @lhoestq @lvwerra | {
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CC: @lvwerra | {
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https://api.github.com/repos/huggingface/datasets/issues/3679 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3679/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3679/comments | https://api.github.com/repos/huggingface/datasets/issues/3679/events | https://github.com/huggingface/datasets/issues/3679 | 1,124,062,133 | I_kwDODunzps5C_9O1 | 3,679 | Download datasets from a private hub | {
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The obvious workaround is to clone the repo first and then load it from local storage, but this adds an extra step. It'd be great to have the same experience regardless of where the hub is hosted.
The same issue exists with the transformers library and the CLI. I'm going to create issues there as well, and I'll reference them below. | {
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A clear and concise description of what the bug is.
## Steps to reproduce the bug
```python
from datasets import load_dataset
iterable_dataset = load_dataset("discovery", name="discovery", split="train", streaming=True)
list(iterable_dataset.take(1))
```
## Expected results
The first row of the train split.
## Actual results
```
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 365, in __iter__
for key, example in self._iter():
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 362, in _iter
yield from ex_iterable
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 272, in __iter__
yield from islice(self.ex_iterable, self.n)
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 79, in __iter__
yield from self.generate_examples_fn(**self.kwargs)
File "/home/slesage/.cache/huggingface/modules/datasets_modules/datasets/discovery/542fab7a9ddc1d9726160355f7baa06a1ccc44c40bc8e12c09e9bc743aca43a2/discovery.py", line 333, in _generate_examples
with open(data_file, encoding="utf8") as f:
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/datasets/streaming.py", line 64, in wrapper
return function(*args, use_auth_token=use_auth_token, **kwargs)
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/datasets/utils/streaming_download_manager.py", line 369, in xopen
file_obj = fsspec.open(file, mode=mode, *args, **kwargs).open()
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/fsspec/core.py", line 456, in open
return open_files(
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/fsspec/core.py", line 288, in open_files
fs, fs_token, paths = get_fs_token_paths(
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/fsspec/core.py", line 611, in get_fs_token_paths
fs = filesystem(protocol, **inkwargs)
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/fsspec/registry.py", line 253, in filesystem
return cls(**storage_options)
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/fsspec/spec.py", line 68, in __call__
obj = super().__call__(*args, **kwargs)
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/fsspec/implementations/zip.py", line 57, in __init__
self.zip = zipfile.ZipFile(self.fo)
File "/home/slesage/.pyenv/versions/3.9.6/lib/python3.9/zipfile.py", line 1257, in __init__
self._RealGetContents()
File "/home/slesage/.pyenv/versions/3.9.6/lib/python3.9/zipfile.py", line 1320, in _RealGetContents
endrec = _EndRecData(fp)
File "/home/slesage/.pyenv/versions/3.9.6/lib/python3.9/zipfile.py", line 263, in _EndRecData
fpin.seek(0, 2)
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/fsspec/implementations/http.py", line 676, in seek
raise ValueError("Cannot seek streaming HTTP file")
ValueError: Cannot seek streaming HTTP file
```
## Environment info
- `datasets` version: 1.18.3
- Platform: Linux-5.11.0-1027-aws-x86_64-with-glibc2.31
- Python version: 3.9.6
- PyArrow version: 6.0.1
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```python
from datasets import Dataset
ds = Dataset.from_dict({"a": range(4)})
ds = ds.map(lambda x: {"b": [[None, [0]]]}, batched=True, batch_size=1, remove_columns=["a"])
print(ds.to_pandas())
# b
# 0 [None, [0]]
# 1 [[], [0]]
# 2 [[], [0]]
# 3 [[], [0]]
```
This issue has been experienced when running the `run_qa.py` example from `transformers` (see issue https://github.com/huggingface/transformers/issues/15401)
This can be due to a bug in when casting `None` in nested lists. Casting only happens after the first batch, since the first batch is used to infer the feature types.
cc @sgugger | {
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- **Name:** CodeContests
- **Description:** CodeContests is a competitive programming dataset for machine-learning.
- **Paper:**
- **Data:** https://github.com/deepmind/code_contests
- **Motivation:** This dataset was used when training [AlphaCode](https://deepmind.com/blog/article/Competitive-programming-with-AlphaCode).
Instructions to add a new dataset can be found [here](https://github.com/huggingface/datasets/blob/master/ADD_NEW_DATASET.md).
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} | This pull request add FrugalScore metric for NLG systems evaluation.
FrugalScore is a reference-based metric for NLG models evaluation. It is based on a distillation approach that allows to learn a fixed, low cost version of any expensive NLG metric, while retaining most of its original performance.
Paper: https://arxiv.org/abs/2110.08559?context=cs
Github: https://github.com/moussaKam/FrugalScore
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The dataset that is downloaded from the Hub via `load_dataset("snli")` is different from what is available in the dataset viewer. In the viewer the labels are not encoded (i.e., "neutral", "entailment", "contradiction"), while the downloaded dataset shows the encoded labels (i.e., 0, 1, 2).
Is this expected?
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version:
- Platform: Ubuntu 20.4
- Python version: 3.7
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} | This fixes a bug in the `TestCommand` where multiple kwargs for `name` were passed if it was set in both default and `module.builder_kwargs`. Example error:
```Python
Traceback (most recent call last):
File "create_metadata.py", line 96, in <module>
main(**vars(args))
File "create_metadata.py", line 86, in main
metadata_command.run()
File "/opt/conda/lib/python3.7/site-packages/datasets/commands/test.py", line 144, in run
for j, builder in enumerate(get_builders()):
File "/opt/conda/lib/python3.7/site-packages/datasets/commands/test.py", line 141, in get_builders
name=name, cache_dir=self._cache_dir, data_dir=self._data_dir, **module.builder_kwargs
TypeError: type object got multiple values for keyword argument 'name'
```
Let me know what you think. | {
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Currently, only part of the datasets provide `dataset_size`, `download_size`, `size_in_bytes` (and `num_bytes` and `num_examples` inside `splits`). I would want to get this information, or an estimation, for all the datasets.
**Describe the solution you'd like**
- get access to the git information for the dataset files hosted on the hub
- look at the [`Content-Length`](https://developer.mozilla.org/en-US/docs/Web/HTTP/Headers/Content-Length) for the files served by HTTP
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} | in get_dataset_infos(). Also: add the `use_auth_token` parameter, and create get_dataset_config_info()
✅ Closes: #3013 | {
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As 'validated' contains significantly more data than 'train' (although it contains both test and validation, so one needs to be careful there), it can be useful to train better models where no strict comparison with the previous work is intended. | {
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In OVH cloud during Huggingface Robust-speech-recognition event on a AI training notebook instance using jupyter lab and running jupyter notebook When using the dataset.cast_column("audio",Audio(sampling_rate=16_000))
method I get error
This was working with datasets version 1.17.1.dev0
but now with version 1.18.3 produces the error above.
## Steps to reproduce the bug
load dataset:
remove columns:
run my fix_path function.
This also creates the audio column that is referring to the absolute file path of the audio
Then I concatenate few other datasets and finally try the cast_column method
but get error:
## Expected results
A clear and concise description of the expected results.
## Actual results
Specify the actual results or traceback.
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.18.3
- Platform:
OVH Cloud, AI Training section, container for Huggingface Robust Speech Recognition event image(baaastijn/ovh_huggingface)
- Python version: 3.8.8
- PyArrow version:
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} | @anton-l suggested to proccess .opus files with `torchaudio` instead of `soundfile` as it's faster:
(moreover, I didn't manage to load .opus files with `soundfile` / `librosa` locally on any my machine anyway for some reason, even with `ffmpeg` installed).
For now my current changes work with locally stored file:
```python
# download sample opus file (from MultilingualSpokenWords dataset)
!wget https://huggingface.co/datasets/polinaeterna/test_opus/resolve/main/common_voice_tt_17737010.opus
from datasets import Dataset, Audio
audio_path = "common_voice_tt_17737010.opus"
dataset = Dataset.from_dict({"audio": [audio_path]}).cast_column("audio", Audio(48000))
dataset[0]
# {'audio': {'path': 'common_voice_tt_17737010.opus',
# 'array': array([ 0.0000000e+00, 0.0000000e+00, 3.0517578e-05, ...,
# -6.1035156e-05, 6.1035156e-05, 0.0000000e+00], dtype=float32),
# 'sampling_rate': 48000}}
```
But it doesn't work when loading inside s dataset from bytes (I checked on [MultilingualSpokenWords](https://github.com/huggingface/datasets/pull/3666), the PR is a draft now, maybe the bug is somewhere there )
```python
import torchaudio
with open(audio_path, "rb") as b:
print(torchaudio.load(b))
# RuntimeError: Error loading audio file: failed to open file <in memory buffer>
``` | {
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} | Opus files requires `libsndfile>=1.0.30`. Add check for this version and tests.
**outdated:**
Add [Multillingual Spoken Words dataset](https://mlcommons.org/en/multilingual-spoken-words/)
You can specify multiple languages for downloading 😌:
```python
ds = load_dataset("datasets/ml_spoken_words", languages=["ar", "tt"])
```
1. I didn't take into account that each time you pass a set of languages the data for a specific language is downloaded even if it was downloaded before (since these are custom configs like `ar+tt` and `ar+tt+br`. Maybe that wasn't a good idea?
2. The script will have to be slightly changed after merge of https://github.com/huggingface/datasets/pull/3664
2. Just can't figure out what wrong with dummy files... 😞 Maybe we should get rid of them at some point 😁 | {
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Fix https://github.com/huggingface/datasets/issues/3662 | {
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This is a proposed way of returning the old local file-based generator while keeping the new streaming generator intact.
TODO:
- [ ] brainstorm a bit more on https://github.com/huggingface/datasets/issues/3663 to see if we can do better
- [ ] refactor the heck out of this PR to avoid completely copying the logic between the two generators | {
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## Steps to reproduce the bug
```python
from datasets import load_dataset
from torchaudio import load
ds = load_dataset("common_voice", "ab", split="train")
# both of the following commands fail at the moment
load(ds[0]["audio"]["path"])
load(ds[0]["path"])
```
## Expected results
The path should be the complete absolute path to the downloaded audio file not some relative path.
## Actual results
```bash
~/hugging_face/venv_3.9/lib/python3.9/site-packages/torchaudio/backend/sox_io_backend.py in load(filepath, frame_offset, num_frames, normalize, channels_first, format)
150 filepath, frame_offset, num_frames, normalize, channels_first, format)
151 filepath = os.fspath(filepath)
--> 152 return torch.ops.torchaudio.sox_io_load_audio_file(
153 filepath, frame_offset, num_frames, normalize, channels_first, format)
154
RuntimeError: Error loading audio file: failed to open file cv-corpus-6.1-2020-12-11/ab/clips/common_voice_ab_19904194.mp3
```
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.18.3.dev0
- Platform: Linux-5.4.0-96-generic-x86_64-with-glibc2.27
- Python version: 3.9.1
- PyArrow version: 3.0.0
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https://api.github.com/repos/huggingface/datasets/issues/3662 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3662/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3662/comments | https://api.github.com/repos/huggingface/datasets/issues/3662/events | https://github.com/huggingface/datasets/issues/3662 | 1,121,024,403 | I_kwDODunzps5C0XmT | 3,662 | [Audio] MP3 resampling is incorrect when dataset's audio files have different sampling rates | {
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} | [] | closed | false | null | [] | null | [] | 2022-02-01T17:55:04Z | 2022-02-02T10:52:25Z | 2022-02-02T10:52:25Z | MEMBER | null | null | null | The Audio feature resampler for MP3 gets stuck with the first original frequencies it meets, which leads to subsequent decoding to be incorrect.
Here is a code to reproduce the issue:
Let's first consider two audio files with different sampling rates 32000 and 16000:
```python
# first download a mp3 file with sampling_rate=32000
!wget https://file-examples-com.github.io/uploads/2017/11/file_example_MP3_700KB.mp3
import torchaudio
audio_path = "file_example_MP3_700KB.mp3"
audio_path2 = audio_path.replace(".mp3", "_resampled.mp3")
resample = torchaudio.transforms.Resample(32000, 16000) # create a new file with sampling_rate=16000
torchaudio.save(audio_path2, resample(torchaudio.load(audio_path)[0]), 16000)
```
Then we can see an issue here when decoding:
```python
from datasets import Dataset, Audio
dataset = Dataset.from_dict({"audio": [audio_path, audio_path2]}).cast_column("audio", Audio(48000))
dataset[0] # decode the first audio file sets the resampler orig_freq to 32000
print(dataset .features["audio"]._resampler.orig_freq)
# 32000
print(dataset[0]["audio"]["array"].shape) # here decoding is fine
# (1308096,)
dataset = Dataset.from_dict({"audio": [audio_path, audio_path2]}).cast_column("audio", Audio(48000))
dataset[1] # decode the second audio file sets the resampler orig_freq to 16000
print(dataset .features["audio"]._resampler.orig_freq)
# 16000
print(dataset[0]["audio"]["array"].shape) # here decoding uses orig_freq=16000 instead of 32000
# (2616192,)
```
The value of `orig_freq` doesn't change no matter what file needs to be decoded
cc @patrickvonplaten @anton-l @cahya-wirawan @albertvillanova
The issue seems to be here in `Audio.decode_mp3`:
https://github.com/huggingface/datasets/blob/4c417d52def6e20359ca16c6723e0a2855e5c3fd/src/datasets/features/audio.py#L176-L180 | {
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https://api.github.com/repos/huggingface/datasets/issues/3661 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3661/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3661/comments | https://api.github.com/repos/huggingface/datasets/issues/3661/events | https://github.com/huggingface/datasets/pull/3661 | 1,121,000,251 | PR_kwDODunzps4x61ad | 3,661 | Remove unnecessary 'r' arg in | {
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} | Originally from #3489 | {
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} | I tested the links. I also fixed some typos.
Originally from #3489 | {
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] | null | [] | 2022-02-01T16:23:57Z | 2022-02-09T08:00:37Z | 2022-02-09T08:00:37Z | NONE | null | null | null | ## Dataset viewer issue for '*happifyhealth/twitter_pnn*'
**Link:** *[link to the dataset viewer page](https://huggingface.co/datasets/happifyhealth/twitter_pnn)*
I used
```
dataset.push_to_hub("happifyhealth/twitter_pnn")
```
but the preview is not working.
Am I the one who added this dataset ? Yes
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} | [] | open | false | null | [] | null | [] | 2022-02-01T15:57:56Z | 2022-09-08T08:18:28Z | null | NONE | null | null | null | ## Dataset viewer issue for '*P3*'
**Link: https://huggingface.co/datasets/bigscience/P3**
```
Status code: 400
Exception: SplitsNotFoundError
Message: The split names could not be parsed from the dataset config.
```
Am I the one who added this dataset ? No
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https://api.github.com/repos/huggingface/datasets/issues/3657 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3657/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3657/comments | https://api.github.com/repos/huggingface/datasets/issues/3657/events | https://github.com/huggingface/datasets/pull/3657 | 1,120,602,620 | PR_kwDODunzps4x5f1I | 3,657 | Extend dataset builder for streaming in `get_dataset_split_names` | {
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} | [] | closed | false | null | [] | null | [] | 2022-02-01T12:21:24Z | 2022-02-03T22:49:06Z | 2022-02-02T11:22:01Z | CONTRIBUTOR | null | false | {
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} | Currently, `get_dataset_split_names` doesn't extend a builder module to support streaming, even though it uses `StreamingDownloadManager` to download data. This PR fixes that.
To test the change, run the following:
```bash
pip install git+https://github.com/huggingface/datasets.git@fix-get_dataset_split_names-streaming
python -c "from datasets import get_dataset_split_names; print(get_dataset_split_names('facebook/multilingual_librispeech', 'german', download_mode='force_redownload', revision='137923f945552c6afdd8b60e4a7b43e3088972c1'))"
``` | {
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] | null | [] | 2022-02-01T10:53:33Z | 2022-02-10T10:56:59Z | 2022-02-10T10:56:38Z | NONE | null | null | null | ## Describe the bug
I get a checksum error when loading the `subjqa` dataset (used in the transformers book).
## Steps to reproduce the bug
```python
from datasets import load_dataset
subjqa = load_dataset("subjqa","electronics")
```
## Expected results
Loading the dataset
## Actual results
```
---------------------------------------------------------------------------
NonMatchingChecksumError Traceback (most recent call last)
<ipython-input-2-d2857d460155> in <module>()
2 from datasets import load_dataset
3
----> 4 subjqa = load_dataset("subjqa","electronics")
3 frames
/usr/local/lib/python3.7/dist-packages/datasets/utils/info_utils.py in verify_checksums(expected_checksums, recorded_checksums, verification_name)
38 if len(bad_urls) > 0:
39 error_msg = "Checksums didn't match" + for_verification_name + ":\n"
---> 40 raise NonMatchingChecksumError(error_msg + str(bad_urls))
41 logger.info("All the checksums matched successfully" + for_verification_name)
42
NonMatchingChecksumError: Checksums didn't match for dataset source files:
['https://github.com/lewtun/SubjQA/archive/refs/heads/master.zip']
```
## Environment info
Google colab
- `datasets` version: 1.18.2
- Platform: Linux-5.4.144+-x86_64-with-Ubuntu-18.04-bionic
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] | null | [] | 2022-01-31T18:45:47Z | 2022-12-19T19:18:10Z | 2022-02-14T14:15:41Z | CONTRIBUTOR | null | null | null | ## Describe the bug
Trying to use the `pubmed` dataset fails to reach / download the source files.
## Steps to reproduce the bug
```python
pubmed_train = datasets.load_dataset('pubmed', split='train')
```
## Expected results
Should begin downloading the pubmed dataset.
## Actual results
```
ConnectionError: Couldn't reach ftp://ftp.ncbi.nlm.nih.gov/pubmed/baseline/pubmed21n0865.xml.gz (InvalidSchema("No connection adapters were found for 'ftp://ftp.ncbi.nlm.nih.gov/pubmed/baseline/pubmed21n0865.xml.gz'"))
```
## Environment info
- `datasets` version: 1.18.2
- Platform: macOS-11.4-x86_64-i386-64bit
- Python version: 3.8.2
- PyArrow version: 6.0.0
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} | This PR does the following:
* if `dataset_infos.json` exists for a dataset, uses `num_examples` to print the total number of examples that needs to be generated (in `builder.py`)
* fixes `tqdm` + multiprocessing in Jupyter Notebook/Colab (the issue stems from this commit in the `tqdm` repo: https://github.com/tqdm/tqdm/commit/f7722edecc3010cb35cc1c923ac4850a76336f82)
* adds the missing `drop_last_batch` and `with_ranks` params to `DatasetDict.map`
* correctly computes the number of iterations in `map` and the CSV/JSON loader when `batched=True` to fix `tqdm` progress bars
* removes the `bool(logging.get_verbosity() == logging.NOTSET)` (or simplifies `bool(logging.get_verbosity() == logging.NOTSET) or not utils.is_progress_bar_enabled()` to `not utils.is_progress_bar_enabled()`) condition and uses `utils.is_progress_bar_enabled` to check if `tqdm` output is enabled (this comment from @stas00 explains why the `bool(logging.get_verbosity() == logging.NOTSET)` check is problematic: https://github.com/huggingface/transformers/issues/14889#issue-1087318463)
Fix #2630 | {
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] | open | false | null | [] | null | [] | 2022-01-31T09:35:07Z | 2022-01-31T09:35:07Z | null | MEMBER | null | null | null | ## Describe the bug
`to_json` in multiprocessing fashion sometimes deadlock, instead of raising exceptions. Temporary solution is to see that it deadlocks, and then reduce the number of processes or batch size in order to reduce the memory footprint.
As @lhoestq pointed out, this might be related to https://bugs.python.org/issue22393#msg315684 where `multiprocessing` fails to raise the OOM exception. One suggested alternative is not use `concurrent.futures` instead.
## Steps to reproduce the bug
## Expected results
Script fails when one worker hits OOM, and raise appropriate error.
## Actual results
Deadlock
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.8.1
- Platform: Linux
- Python version: 3.8
- PyArrow version: 6.0.1
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} | Fixes #3580 and makes the wiki_bio dataset work again. I changed the link and some documentation, and all the tests pass. Thanks @lhoestq for uploading the dataset to the HuggingFace data bucket.
@lhoestq -- all the tests pass, but I'm still not able to import the dataset, as the old Google Drive link is cached somewhere:
```python
>>> from datasets import load_dataset
load_dataset("wiki_bio>>> load_dataset("wiki_bio")
Using custom data configuration default
Downloading and preparing dataset wiki_bio/default (download: 318.53 MiB, generated: 736.94 MiB, post-processed: Unknown size, total: 1.03 GiB) to /home/jxm3/.cache/huggingface/datasets/wiki_bio/default/1.1.0/5293ce565954ba965dada626f1e79684e98172d950371d266bf3caaf87e911c9...
Traceback (most recent call last):
...
File "/home/jxm3/random/datasets/src/datasets/utils/file_utils.py", line 612, in get_from_cache
raise FileNotFoundError(f"Couldn't find file at {url}")
FileNotFoundError: Couldn't find file at https://drive.google.com/uc?export=download&id=1L7aoUXzHPzyzQ0ns4ApBbYepsjFOtXil
```
what do I have to do to invalidate the cache and actually import the dataset? It's clearly set up correctly, since the data is downloaded and processed by the tests.
As an aside, this caching-loading-scripts behavior makes for a really bad developer experience. I just wasted an hour trying to figure out where the caching was happening and how to disable it, and I don't know. All I wanted to do was update the link and submit a pull request! I recommend that you all either change this behavior (i.e. updating the link to a dataset should "just work") or document it, since I couldn't find any information about this in the contributing.md or readme or anywhere else! Thanks! | {
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} | I'm using `to_json(..., num_proc=num_proc, compressiong='gzip')` with `num_proc>1`. I'm having an issue where things seem to deadlock at some point. Eventually I see OOM. I'm guessing it's an issue where one process starts to take a long time for a specific batch, and so other process keep accumulating their results in memory.
In order to flush memory, I propose we use optional `imap_unordered`. This will prevent one process to block the other ones. The logical thinking is that index are rarily relevant, and in one wants to keep an index, one can still create another column and reconstruct from there. | {
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] | open | false | null | [] | null | [] | 2022-01-28T14:59:41Z | 2022-01-28T15:02:35Z | null | MEMBER | null | null | null | ## Adding a Dataset
- **Name:** IGLUE
- **Description:** IGLUE brings together 4 vision-and-language tasks across 20 languages (Twitter [thread](https://twitter.com/ebugliarello/status/1487045497583976455?s=20&t=SB4LZGDhhkUW83ugcX_m5w))
- **Paper:** https://arxiv.org/abs/2201.11732
- **Data:** https://github.com/e-bug/iglue
- **Motivation:** This dataset would provide a nice example of combining the text and image features of `datasets` together for multimodal applications.
Note: the data / code are not yet visible on the GitHub repo, so I've pinged the authors for more information.
Instructions to add a new dataset can be found [here](https://github.com/huggingface/datasets/blob/master/ADD_NEW_DATASET.md).
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} | My initial idea was to avoid the `flatten_indices` call and reorder a new column instead, but in the end I decided to follow `concatenate_datasets` and use `flatten_indices` to avoid padding when `dataset._indices.num_rows != dataset._data.num_rows`.
Fix #3599 | {
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