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OnClass.data-00000-of-00001

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OnClass.npz

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accuracies.json

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 {
-    "query_accuracy": "| Cell Type | N cells |  celltypist |  knn on bbknn |  knn on harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| spermatid | 404 | 0.98 | 0.98 | 0.99 | 0.98 | 0.00 | 0.98 | 0.98 | 0.98 | 0.99 |\n| spermatocyte | 301 | 0.97 | 0.97 | 0.98 | 0.97 | 0.00 | 0.96 | 0.98 | 0.97 | 0.98 |\n| male germ cell | 13 | 0.96 | 0.96 | 0.96 | 0.93 | 0.00 | 0.93 | 1.00 | 0.92 | 0.96 |\n| spermatogonium | 9 | 0.89 | 0.71 | 0.75 | 0.82 | 0.00 | 0.82 | 0.95 | 0.67 | 0.89 |\n| oocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |",
-    "ref_accuracy": "| Cell Type | N cells |  celltypist |  knn on bbknn |  knn on harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| spermatid | 3605 | 0.98 | 0.00 | 0.99 | 0.99 | 0.00 | 0.99 | 0.99 | 0.98 | 0.99 |\n| spermatocyte | 2769 | 0.97 | 0.00 | 0.99 | 0.99 | 0.00 | 0.98 | 0.99 | 0.98 | 0.99 |\n| male germ cell | 103 | 0.96 | 0.00 | 0.98 | 0.97 | 0.00 | 0.99 | 1.00 | 0.99 | 1.00 |\n| spermatogonium | 55 | 0.85 | 0.00 | 0.95 | 0.90 | 0.00 | 0.77 | 0.94 | 0.94 | 0.93 |\n| oocyte | 11 | 0.92 | 0.00 | 1.00 | 0.92 | 0.00 | 0.65 | 1.00 | 1.00 | 1.00 |"
+    "query_accuracy": "| Cell Type | N cells |  celltypist |  knn on bbknn |  knn on harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| spermatid | 400 | 0.98 | 0.98 | 0.99 | 0.99 | 0.00 | 0.98 | 0.99 | 0.97 | 0.99 |\n| spermatocyte | 310 | 0.97 | 0.98 | 0.98 | 0.98 | 0.00 | 0.97 | 0.98 | 0.95 | 0.98 |\n| male germ cell | 10 | 0.95 | 0.95 | 0.95 | 0.95 | 0.00 | 0.90 | 0.95 | 0.95 | 0.95 |\n| spermatogonium | 7 | 1.00 | 0.73 | 0.92 | 0.88 | 0.00 | 0.88 | 1.00 | 0.80 | 1.00 |\n| oocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |",
+    "ref_accuracy": "| Cell Type | N cells |  celltypist |  knn on bbknn |  knn on harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| spermatid | 3609 | 0.98 | 0.00 | 0.99 | 0.99 | 0.00 | 0.99 | 0.99 | 0.98 | 0.99 |\n| spermatocyte | 2760 | 0.97 | 0.00 | 0.99 | 0.99 | 0.00 | 0.98 | 0.98 | 0.97 | 0.99 |\n| male germ cell | 106 | 0.97 | 0.00 | 0.99 | 0.98 | 0.00 | 0.99 | 1.00 | 0.97 | 1.00 |\n| spermatogonium | 57 | 0.77 | 0.00 | 0.89 | 0.89 | 0.00 | 0.84 | 0.93 | 0.93 | 0.92 |\n| oocyte | 10 | 0.95 | 0.00 | 1.00 | 1.00 | 0.00 | 0.87 | 1.00 | 1.00 | 1.00 |"
 }

celltypist.pkl

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faiss_index.faiss

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harmony_knn_classifier.joblib

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scanvi/model.pt

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scvi/model.pt

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scvi_knn_classifier.joblib

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svm_classifier.joblib

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svm_classifier_cuml.joblib

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xgboost_classifier.model

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