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Update app.py
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import pandas as pd
import numpy as np
import gradio as gr
import sqlite3
import os
from sklearn.ensemble import IsolationForest
from sklearn.preprocessing import StandardScaler
import plotly.express as px
import plotly.graph_objects as go
from datetime import datetime
import logging
# Set up logging
logging.basicConfig(level=logging.INFO)
class DataQualitySystem:
def __init__(self):
self.db_name = 'data_quality.db'
self.setup_database()
def setup_database(self):
conn = sqlite3.connect(self.db_name)
cursor = conn.cursor()
cursor.execute('''
CREATE TABLE IF NOT EXISTS quality_metrics
(timestamp TEXT, metric TEXT, value REAL)
''')
cursor.execute('''
CREATE TABLE IF NOT EXISTS user_feedback
(timestamp TEXT, row_index INTEGER, feedback TEXT)
''')
conn.commit()
conn.close()
def load_and_process_data(self, file):
try:
file_path = file.name # This should work for both CSV and XLSX files
if file_path.endswith('.csv'):
df = pd.read_csv(file_path)
elif file_path.endswith('.xlsx'):
df = pd.read_excel(file_path)
else:
return None, "Unsupported file format. Please use CSV or XLSX."
# Initial data checks
metrics = self.initial_data_checks(df)
# Anomaly detection
df_with_anomalies = self.detect_anomalies(df)
# Store quality metrics
self.store_quality_metrics(metrics)
return df_with_anomalies, "Data processed successfully!"
except Exception as e:
logging.error(f"Error processing file: {str(e)}")
return None, f"Error processing file: {str(e)}"
def initial_data_checks(self, df):
metrics = {
'total_rows': len(df),
'null_values': df.isnull().sum().sum(),
'duplicate_entries': df.duplicated().sum(),
}
# Calculate standard deviation for numeric columns
numeric_cols = df.select_dtypes(include=[np.number]).columns
for col in numeric_cols:
metrics[f'std_dev_{col}'] = df[col].std()
return metrics
def detect_anomalies(self, df):
numeric_df = df.select_dtypes(include=[np.number])
if len(numeric_df.columns) > 0:
scaler = StandardScaler()
scaled_data = scaler.fit_transform(numeric_df)
model = IsolationForest(contamination=0.1, random_state=42)
df['anomaly'] = model.fit_predict(scaled_data)
df['anomaly_score'] = model.score_samples(scaled_data)
return df
def store_quality_metrics(self, metrics):
conn = sqlite3.connect(self.db_name)
cursor = conn.cursor()
timestamp = datetime.now().strftime('%Y-%m-%d %H:%M:%S')
for metric, value in metrics.items():
cursor.execute(
'INSERT INTO quality_metrics (timestamp, metric, value) VALUES (?, ?, ?)',
(timestamp, metric, float(value))
)
conn.commit()
conn.close()
def save_feedback(self, index, feedback):
conn = sqlite3.connect(self.db_name)
cursor = conn.cursor()
timestamp = datetime.now().strftime('%Y-%m-%d %H:%M:%S')
cursor.execute(
'INSERT INTO user_feedback (timestamp, row_index, feedback) VALUES (?, ?, ?)',
(timestamp, index, feedback)
)
conn.commit()
conn.close()
return "Feedback saved successfully!"
def generate_report(self, df):
if df is None:
return None, None, None
# Create summary statistics plot
numeric_cols = df.select_dtypes(include=[np.number]).columns
summary_stats = df[numeric_cols].describe()
summary_fig = go.Figure(data=[
go.Table(
header=dict(values=['Statistic'] + list(summary_stats.columns)),
cells=dict(values=[summary_stats.index] + [summary_stats[col].tolist() for col in summary_stats.columns])
)
])
# Create anomaly distribution plot
if 'anomaly_score' in df.columns:
anomaly_fig = px.histogram(df, x='anomaly_score',
title='Distribution of Anomaly Scores')
else:
anomaly_fig = None
# Create missing values plot
missing_data = df.isnull().sum()
missing_fig = px.bar(x=missing_data.index, y=missing_data.values,
title='Missing Values by Column')
return summary_fig, anomaly_fig, missing_fig
def create_gradio_interface():
system = DataQualitySystem()
def process_file(file):
df, message = system.load_and_process_data(file)
if df is not None:
summary_fig, anomaly_fig, missing_fig = system.generate_report(df)
return message, summary_fig, anomaly_fig, missing_fig
return message, None, None, None
def submit_feedback(index, feedback):
return system.save_feedback(index, feedback)
# Create the interface
with gr.Blocks() as app:
gr.Markdown("# Data Quality Assurance System")
with gr.Row():
file_input = gr.File(label="Upload Data File (CSV or XLSX)")
with gr.Row():
process_btn = gr.Button("Process Data")
output_message = gr.Textbox(label="Status")
with gr.Tabs():
with gr.TabItem("Summary Statistics"):
summary_plot = gr.Plot()
with gr.TabItem("Anomaly Distribution"):
anomaly_plot = gr.Plot()
with gr.TabItem("Missing Values"):
missing_plot = gr.Plot()
with gr.Row():
feedback_index = gr.Number(label="Row Index")
feedback_text = gr.Textbox(label="Feedback")
feedback_btn = gr.Button("Submit Feedback")
# Set up event handlers
process_btn.click(
process_file,
inputs=[file_input],
outputs=[output_message, summary_plot, anomaly_plot, missing_plot]
)
feedback_btn.click(
submit_feedback,
inputs=[feedback_index, feedback_text],
outputs=[output_message]
)
return app
# Launch the interface
if __name__ == "__main__":
app = create_gradio_interface()
app.launch()