Spaces:
Running
Running
feat: add res
Browse files- .gitattributes +5 -0
- README.md +3 -14
- app.py +3 -73
- requirements.txt +3 -3
- res/example.png +3 -0
- res/ptbxl_database.csv +3 -0
.gitattributes
CHANGED
@@ -33,3 +33,8 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
|
|
33 |
*.zip filter=lfs diff=lfs merge=lfs -text
|
34 |
*.zst filter=lfs diff=lfs merge=lfs -text
|
35 |
*tfevents* filter=lfs diff=lfs merge=lfs -text
|
|
|
|
|
|
|
|
|
|
|
|
33 |
*.zip filter=lfs diff=lfs merge=lfs -text
|
34 |
*.zst filter=lfs diff=lfs merge=lfs -text
|
35 |
*tfevents* filter=lfs diff=lfs merge=lfs -text
|
36 |
+
*.md filter=lfs diff=lfs merge=lfs -text
|
37 |
+
*.py filter=lfs diff=lfs merge=lfs -text
|
38 |
+
*.txt filter=lfs diff=lfs merge=lfs -text
|
39 |
+
*.png filter=lfs diff=lfs merge=lfs -text
|
40 |
+
*.csv filter=lfs diff=lfs merge=lfs -text
|
README.md
CHANGED
@@ -1,14 +1,3 @@
|
|
1 |
-
|
2 |
-
|
3 |
-
|
4 |
-
colorFrom: yellow
|
5 |
-
colorTo: purple
|
6 |
-
sdk: gradio
|
7 |
-
sdk_version: 5.0.1
|
8 |
-
app_file: app.py
|
9 |
-
pinned: false
|
10 |
-
license: apache-2.0
|
11 |
-
short_description: Alfred Demo
|
12 |
-
---
|
13 |
-
|
14 |
-
An example chatbot using [Gradio](https://gradio.app), [`huggingface_hub`](https://huggingface.co/docs/huggingface_hub/v0.22.2/en/index), and the [Hugging Face Inference API](https://huggingface.co/docs/api-inference/index).
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:c44d044e074ff03b22bd5bba6429e266c26f3dea6c4e3cdf3abd9f70a7938439
|
3 |
+
size 406
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
app.py
CHANGED
@@ -1,73 +1,3 @@
|
|
1 |
-
|
2 |
-
|
3 |
-
|
4 |
-
import requests
|
5 |
-
from matplotlib.image import imread
|
6 |
-
|
7 |
-
|
8 |
-
ALFRED_URL = "http://192.168.1.202:8090"
|
9 |
-
|
10 |
-
selected_columns = ["ecg_id", "patient_id", "age", "sex", "scp_codes", "report"]
|
11 |
-
ptbxl_df = pd.read_csv("./res/ptbxl_database.csv")
|
12 |
-
ptbxl_df = ptbxl_df[selected_columns]
|
13 |
-
|
14 |
-
|
15 |
-
def get_ecg_id_from_dataframe(df: pd.DataFrame, evt: gr.SelectData):
|
16 |
-
return evt.row_value[0]
|
17 |
-
|
18 |
-
|
19 |
-
def get_ecg_image_from_dataframe(ecg_id):
|
20 |
-
response = requests.post(
|
21 |
-
f"{ALFRED_URL}/hf_demo/ptbxl_to_image",
|
22 |
-
params={"ecg_id": ecg_id},
|
23 |
-
)
|
24 |
-
response.raise_for_status()
|
25 |
-
return imread(BytesIO(response.content))
|
26 |
-
|
27 |
-
|
28 |
-
def get_alfred_from_dataframe(ecg_id):
|
29 |
-
response = requests.post(
|
30 |
-
f"{ALFRED_URL}/hf_demo/alfred",
|
31 |
-
params={"ecg_id": ecg_id},
|
32 |
-
)
|
33 |
-
response.raise_for_status()
|
34 |
-
return response.json()
|
35 |
-
|
36 |
-
|
37 |
-
with gr.Blocks() as demo:
|
38 |
-
with gr.Tab("Example"):
|
39 |
-
with gr.Row():
|
40 |
-
gr_df = gr.Image(
|
41 |
-
value="./res/example.png",
|
42 |
-
interactive=False,
|
43 |
-
type="filepath",
|
44 |
-
label="This is an example screen. The service is not fully operational yet due to DNS issues. Please wait a moment.",
|
45 |
-
)
|
46 |
-
|
47 |
-
with gr.Tab("Coming Soon"):
|
48 |
-
with gr.Row():
|
49 |
-
gr_df = gr.Dataframe(
|
50 |
-
value=ptbxl_df,
|
51 |
-
interactive=False,
|
52 |
-
max_height=200,
|
53 |
-
label="All PTB-XL v1.3.0 data (https://physionet.org/content/ptb-xl/1.0.3/ptbxl_database.csv). You can refer to the following URL(https://physionet.org/content/ptb-xl/1.0.3/scp_statements.csv) to understand what 'scp_codes' represent.",
|
54 |
-
)
|
55 |
-
|
56 |
-
with gr.Row():
|
57 |
-
ecg_id_output = gr.Textbox(label="The selected ecg_id is")
|
58 |
-
|
59 |
-
with gr.Row():
|
60 |
-
ecg_viewer = gr.Image(interactive=False, label="The selected ecg is")
|
61 |
-
|
62 |
-
with gr.Row():
|
63 |
-
alfred_result = gr.JSON(value={}, label="Alfred said that")
|
64 |
-
|
65 |
-
gr_df.select(fn=get_ecg_id_from_dataframe, inputs=gr_df, outputs=ecg_id_output)
|
66 |
-
ecg_id_output.change(
|
67 |
-
fn=get_ecg_image_from_dataframe, inputs=ecg_id_output, outputs=ecg_viewer
|
68 |
-
)
|
69 |
-
ecg_id_output.change(
|
70 |
-
fn=get_alfred_from_dataframe, inputs=ecg_id_output, outputs=alfred_result
|
71 |
-
)
|
72 |
-
|
73 |
-
demo.launch()
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:d6359e262aae36aec6373e8eb20498628b038369563ee54db01a9532f33db93d
|
3 |
+
size 2356
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
requirements.txt
CHANGED
@@ -1,3 +1,3 @@
|
|
1 |
-
|
2 |
-
|
3 |
-
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:bfbc47c2455bc1a306bb2ee618c96b9bc1c325ff8314f0e49ee93454726553d9
|
3 |
+
size 55
|
res/example.png
ADDED
![]() |
Git LFS Details
|
res/ptbxl_database.csv
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:7600de9c1b27d181d850b3c6038a35d7c3ddb6bb33b702e3a20252a6859d216b
|
3 |
+
size 6594879
|