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import os |
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import sys |
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sys.path.append(os.path.abspath('./modules')) |
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import math |
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import tempfile |
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import gradio |
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import torch |
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import spaces |
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import numpy as np |
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import functools |
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import trimesh |
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import copy |
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from PIL import Image |
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from scipy.spatial.transform import Rotation |
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from modules.pe3r.images import Images |
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from modules.dust3r.inference import inference |
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from modules.dust3r.image_pairs import make_pairs |
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from modules.dust3r.utils.image import load_images, rgb |
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from modules.dust3r.utils.device import to_numpy |
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from modules.dust3r.viz import add_scene_cam, CAM_COLORS, OPENGL, pts3d_to_trimesh, cat_meshes |
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from modules.dust3r.cloud_opt import global_aligner, GlobalAlignerMode |
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from copy import deepcopy |
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import cv2 |
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from typing import Any, Dict, Generator,List |
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import matplotlib.pyplot as pl |
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from modules.mobilesamv2.utils.transforms import ResizeLongestSide |
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from modules.pe3r.models import Models |
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import torchvision.transforms as tvf |
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silent = False |
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device = 'cpu' |
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pe3r = Models(device) |
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def _convert_scene_output_to_glb(outdir, imgs, pts3d, mask, focals, cams2world, cam_size=0.05, |
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cam_color=None, as_pointcloud=False, |
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transparent_cams=False): |
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assert len(pts3d) == len(mask) <= len(imgs) <= len(cams2world) == len(focals) |
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pts3d = to_numpy(pts3d) |
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imgs = to_numpy(imgs) |
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focals = to_numpy(focals) |
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cams2world = to_numpy(cams2world) |
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scene = trimesh.Scene() |
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if as_pointcloud: |
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pts = np.concatenate([p[m] for p, m in zip(pts3d, mask)]) |
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col = np.concatenate([p[m] for p, m in zip(imgs, mask)]) |
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pct = trimesh.PointCloud(pts.reshape(-1, 3), colors=col.reshape(-1, 3)) |
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scene.add_geometry(pct) |
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else: |
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meshes = [] |
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for i in range(len(imgs)): |
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meshes.append(pts3d_to_trimesh(imgs[i], pts3d[i], mask[i])) |
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mesh = trimesh.Trimesh(**cat_meshes(meshes)) |
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scene.add_geometry(mesh) |
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for i, pose_c2w in enumerate(cams2world): |
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if isinstance(cam_color, list): |
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camera_edge_color = cam_color[i] |
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else: |
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camera_edge_color = cam_color or CAM_COLORS[i % len(CAM_COLORS)] |
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add_scene_cam(scene, pose_c2w, camera_edge_color, |
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None if transparent_cams else imgs[i], focals[i], |
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imsize=imgs[i].shape[1::-1], screen_width=cam_size) |
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rot = np.eye(4) |
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rot[:3, :3] = Rotation.from_euler('y', np.deg2rad(180)).as_matrix() |
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scene.apply_transform(np.linalg.inv(cams2world[0] @ OPENGL @ rot)) |
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outfile = os.path.join(outdir, 'scene.glb') |
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if not silent: |
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print('(exporting 3D scene to', outfile, ')') |
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scene.export(file_obj=outfile) |
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return outfile |
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def get_3D_model_from_scene(outdir, scene, min_conf_thr=3, as_pointcloud=False, mask_sky=False, |
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clean_depth=False, transparent_cams=False, cam_size=0.05): |
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""" |
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extract 3D_model (glb file) from a reconstructed scene |
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""" |
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if scene is None: |
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return None |
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if clean_depth: |
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scene = scene.clean_pointcloud() |
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if mask_sky: |
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scene = scene.mask_sky() |
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rgbimg = scene.ori_imgs |
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focals = scene.get_focals().cpu() |
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cams2world = scene.get_im_poses().cpu() |
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pts3d = to_numpy(scene.get_pts3d()) |
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scene.min_conf_thr = float(scene.conf_trf(torch.tensor(min_conf_thr))) |
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msk = to_numpy(scene.get_masks()) |
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return _convert_scene_output_to_glb(outdir, rgbimg, pts3d, msk, focals, cams2world, as_pointcloud=as_pointcloud, |
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transparent_cams=transparent_cams, cam_size=cam_size) |
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def mask_nms(masks, threshold=0.8): |
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keep = [] |
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mask_num = len(masks) |
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suppressed = np.zeros((mask_num), dtype=np.int64) |
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for i in range(mask_num): |
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if suppressed[i] == 1: |
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continue |
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keep.append(i) |
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for j in range(i + 1, mask_num): |
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if suppressed[j] == 1: |
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continue |
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intersection = (masks[i] & masks[j]).sum() |
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if min(intersection / masks[i].sum(), intersection / masks[j].sum()) > threshold: |
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suppressed[j] = 1 |
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return keep |
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def filter(masks, keep): |
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ret = [] |
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for i, m in enumerate(masks): |
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if i in keep: ret.append(m) |
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return ret |
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def mask_to_box(mask): |
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if mask.sum() == 0: |
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return np.array([0, 0, 0, 0]) |
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rows = np.any(mask, axis=1) |
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cols = np.any(mask, axis=0) |
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top = np.argmax(rows) |
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bottom = len(rows) - 1 - np.argmax(np.flip(rows)) |
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left = np.argmax(cols) |
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right = len(cols) - 1 - np.argmax(np.flip(cols)) |
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return np.array([left, top, right, bottom]) |
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def box_xyxy_to_xywh(box_xyxy): |
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box_xywh = deepcopy(box_xyxy) |
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box_xywh[2] = box_xywh[2] - box_xywh[0] |
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box_xywh[3] = box_xywh[3] - box_xywh[1] |
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return box_xywh |
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def get_seg_img(mask, box, image): |
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image = image.copy() |
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x, y, w, h = box |
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box_area = w * h |
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mask_area = mask.sum() |
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if 1 - (mask_area / box_area) < 0.2: |
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image[mask == 0] = np.array([0, 0, 0], dtype=np.uint8) |
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else: |
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random_values = np.random.randint(0, 255, size=image.shape, dtype=np.uint8) |
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image[mask == 0] = random_values[mask == 0] |
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seg_img = image[y:y+h, x:x+w, ...] |
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return seg_img |
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def pad_img(img): |
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h, w, _ = img.shape |
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l = max(w,h) |
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pad = np.zeros((l,l,3), dtype=np.uint8) |
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if h > w: |
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pad[:,(h-w)//2:(h-w)//2 + w, :] = img |
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else: |
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pad[(w-h)//2:(w-h)//2 + h, :, :] = img |
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return pad |
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def batch_iterator(batch_size: int, *args) -> Generator[List[Any], None, None]: |
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assert len(args) > 0 and all( |
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len(a) == len(args[0]) for a in args |
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), "Batched iteration must have inputs of all the same size." |
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n_batches = len(args[0]) // batch_size + int(len(args[0]) % batch_size != 0) |
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for b in range(n_batches): |
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yield [arg[b * batch_size : (b + 1) * batch_size] for arg in args] |
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def slerp(u1, u2, t): |
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""" |
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Perform spherical linear interpolation (Slerp) between two unit vectors. |
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Args: |
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- u1 (torch.Tensor): First unit vector, shape (1024,) |
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- u2 (torch.Tensor): Second unit vector, shape (1024,) |
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- t (float): Interpolation parameter |
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Returns: |
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- torch.Tensor: Interpolated vector, shape (1024,) |
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""" |
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dot_product = torch.sum(u1 * u2) |
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dot_product = torch.clamp(dot_product, -1.0, 1.0) |
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theta = torch.acos(dot_product) |
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sin_theta = torch.sin(theta) |
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if sin_theta == 0: |
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return u1 + t * (u2 - u1) |
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s1 = torch.sin((1 - t) * theta) / sin_theta |
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s2 = torch.sin(t * theta) / sin_theta |
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return s1 * u1 + s2 * u2 |
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def slerp_multiple(vectors, t_values): |
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""" |
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Perform spherical linear interpolation (Slerp) for multiple vectors. |
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Args: |
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- vectors (torch.Tensor): Tensor of vectors, shape (n, 1024) |
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- a_values (torch.Tensor): Tensor of values corresponding to each vector, shape (n,) |
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Returns: |
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- torch.Tensor: Interpolated vector, shape (1024,) |
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""" |
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n = vectors.shape[0] |
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interpolated_vector = vectors[0] |
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for i in range(1, n): |
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t = t_values[i] / (t_values[i] + t_values[i-1]) |
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interpolated_vector = slerp(interpolated_vector, vectors[i], t) |
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return interpolated_vector |
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@torch.no_grad |
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def get_mask_from_img_sam1(mobilesamv2, yolov8, sam1_image, yolov8_image, original_size, input_size, transform): |
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sam_mask=[] |
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img_area = original_size[0] * original_size[1] |
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obj_results = yolov8(yolov8_image,device=device,retina_masks=False,imgsz=1024,conf=0.25,iou=0.95,verbose=False) |
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input_boxes1 = obj_results[0].boxes.xyxy |
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input_boxes1 = input_boxes1.cpu().numpy() |
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input_boxes1 = transform.apply_boxes(input_boxes1, original_size) |
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input_boxes = torch.from_numpy(input_boxes1).to(device) |
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input_image = mobilesamv2.preprocess(sam1_image) |
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image_embedding = mobilesamv2.image_encoder(input_image)['last_hidden_state'] |
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image_embedding=torch.repeat_interleave(image_embedding, 320, dim=0) |
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prompt_embedding=mobilesamv2.prompt_encoder.get_dense_pe() |
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prompt_embedding=torch.repeat_interleave(prompt_embedding, 320, dim=0) |
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for (boxes,) in batch_iterator(320, input_boxes): |
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with torch.no_grad(): |
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image_embedding=image_embedding[0:boxes.shape[0],:,:,:] |
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prompt_embedding=prompt_embedding[0:boxes.shape[0],:,:,:] |
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sparse_embeddings, dense_embeddings = mobilesamv2.prompt_encoder( |
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points=None, |
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boxes=boxes, |
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masks=None,) |
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low_res_masks, _ = mobilesamv2.mask_decoder( |
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image_embeddings=image_embedding, |
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image_pe=prompt_embedding, |
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sparse_prompt_embeddings=sparse_embeddings, |
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dense_prompt_embeddings=dense_embeddings, |
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multimask_output=False, |
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simple_type=True, |
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) |
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low_res_masks=mobilesamv2.postprocess_masks(low_res_masks, input_size, original_size) |
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sam_mask_pre = (low_res_masks > mobilesamv2.mask_threshold) |
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for mask in sam_mask_pre: |
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if mask.sum() / img_area > 0.002: |
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sam_mask.append(mask.squeeze(1)) |
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sam_mask=torch.cat(sam_mask) |
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sorted_sam_mask = sorted(sam_mask, key=(lambda x: x.sum()), reverse=True) |
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keep = mask_nms(sorted_sam_mask) |
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ret_mask = filter(sorted_sam_mask, keep) |
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return ret_mask |
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@torch.no_grad |
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def get_cog_feats(images): |
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device = 'cuda' if torch.cuda.is_available() else 'cpu' |
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cog_seg_maps = [] |
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rev_cog_seg_maps = [] |
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inference_state = pe3r.sam2.init_state(images=images.sam2_images, video_height=images.sam2_video_size[0], video_width=images.sam2_video_size[1]) |
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mask_num = 0 |
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sam1_images = images.sam1_images |
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sam1_images_size = images.sam1_images_size |
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np_images = images.np_images |
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np_images_size = images.np_images_size |
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sam1_masks = get_mask_from_img_sam1(pe3r.mobilesamv2, pe3r.yolov8, sam1_images[0], np_images[0], np_images_size[0], sam1_images_size[0], images.sam1_transform) |
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for mask in sam1_masks: |
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_, _, _ = pe3r.sam2.add_new_mask( |
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inference_state=inference_state, |
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frame_idx=0, |
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obj_id=mask_num, |
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mask=mask, |
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) |
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mask_num += 1 |
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video_segments = {} |
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for out_frame_idx, out_obj_ids, out_mask_logits in pe3r.sam2.propagate_in_video(inference_state): |
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sam2_masks = (out_mask_logits > 0.0).squeeze(1) |
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video_segments[out_frame_idx] = { |
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out_obj_id: sam2_masks[i].cpu().numpy() |
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for i, out_obj_id in enumerate(out_obj_ids) |
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} |
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if out_frame_idx == 0: |
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continue |
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sam1_masks = get_mask_from_img_sam1(pe3r.mobilesamv2, pe3r.yolov8, sam1_images[out_frame_idx], np_images[out_frame_idx], np_images_size[out_frame_idx], sam1_images_size[out_frame_idx], images.sam1_transform) |
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for sam1_mask in sam1_masks: |
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flg = 1 |
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for sam2_mask in sam2_masks: |
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area1 = sam1_mask.sum() |
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area2 = sam2_mask.sum() |
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intersection = (sam1_mask & sam2_mask).sum() |
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if min(intersection / area1, intersection / area2) > 0.25: |
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flg = 0 |
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break |
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if flg: |
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video_segments[out_frame_idx][mask_num] = sam1_mask.cpu().numpy() |
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mask_num += 1 |
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multi_view_clip_feats = torch.zeros((mask_num+1, 1024)) |
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multi_view_clip_feats_map = {} |
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multi_view_clip_area_map = {} |
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for now_frame in range(0, len(video_segments), 1): |
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image = np_images[now_frame] |
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seg_img_list = [] |
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out_obj_id_list = [] |
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out_obj_mask_list = [] |
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out_obj_area_list = [] |
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rev_seg_map = -np.ones(image.shape[:2], dtype=np.int64) |
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sorted_dict_items = sorted(video_segments[now_frame].items(), key=lambda x: np.count_nonzero(x[1]), reverse=False) |
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for out_obj_id, mask in sorted_dict_items: |
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if mask.sum() == 0: |
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continue |
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rev_seg_map[mask] = out_obj_id |
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rev_cog_seg_maps.append(rev_seg_map) |
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seg_map = -np.ones(image.shape[:2], dtype=np.int64) |
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sorted_dict_items = sorted(video_segments[now_frame].items(), key=lambda x: np.count_nonzero(x[1]), reverse=True) |
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for out_obj_id, mask in sorted_dict_items: |
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if mask.sum() == 0: |
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continue |
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box = np.int32(box_xyxy_to_xywh(mask_to_box(mask))) |
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if box[2] == 0 and box[3] == 0: |
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continue |
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seg_img = get_seg_img(mask, box, image) |
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pad_seg_img = cv2.resize(pad_img(seg_img), (256,256)) |
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seg_img_list.append(pad_seg_img) |
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seg_map[mask] = out_obj_id |
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out_obj_id_list.append(out_obj_id) |
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out_obj_area_list.append(np.count_nonzero(mask)) |
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out_obj_mask_list.append(mask) |
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if len(seg_img_list) == 0: |
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cog_seg_maps.append(seg_map) |
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continue |
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seg_imgs = np.stack(seg_img_list, axis=0) |
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seg_imgs = torch.from_numpy(seg_imgs).permute(0,3,1,2) |
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inputs = pe3r.siglip_processor(images=seg_imgs, return_tensors="pt") |
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inputs = {key: value.to(device) for key, value in inputs.items()} |
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image_features = pe3r.siglip.get_image_features(**inputs) |
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image_features = image_features / image_features.norm(dim=-1, keepdim=True) |
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image_features = image_features.detach().cpu() |
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for i in range(len(out_obj_mask_list)): |
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for j in range(i + 1, len(out_obj_mask_list)): |
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mask1 = out_obj_mask_list[i] |
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mask2 = out_obj_mask_list[j] |
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intersection = np.logical_and(mask1, mask2).sum() |
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area1 = out_obj_area_list[i] |
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area2 = out_obj_area_list[j] |
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if min(intersection / area1, intersection / area2) > 0.025: |
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conf1 = area1 / (area1 + area2) |
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image_features[j] = slerp(image_features[j], image_features[i], conf1) |
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for i, clip_feat in enumerate(image_features): |
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id = out_obj_id_list[i] |
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if id in multi_view_clip_feats_map.keys(): |
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multi_view_clip_feats_map[id].append(clip_feat) |
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multi_view_clip_area_map[id].append(out_obj_area_list[i]) |
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else: |
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multi_view_clip_feats_map[id] = [clip_feat] |
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multi_view_clip_area_map[id] = [out_obj_area_list[i]] |
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cog_seg_maps.append(seg_map) |
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del image_features |
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for i in range(mask_num): |
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if i in multi_view_clip_feats_map.keys(): |
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clip_feats = multi_view_clip_feats_map[i] |
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mask_area = multi_view_clip_area_map[i] |
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multi_view_clip_feats[i] = slerp_multiple(torch.stack(clip_feats), np.stack(mask_area)) |
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else: |
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multi_view_clip_feats[i] = torch.zeros((1024)) |
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multi_view_clip_feats[mask_num] = torch.zeros((1024)) |
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return cog_seg_maps, rev_cog_seg_maps, multi_view_clip_feats |
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@spaces.GPU(duration=120) |
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def get_reconstructed_scene(outdir, filelist, schedule, niter, min_conf_thr, |
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as_pointcloud, mask_sky, clean_depth, transparent_cams, cam_size, |
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scenegraph_type, winsize, refid): |
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""" |
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from a list of images, run dust3r inference, global aligner. |
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then run get_3D_model_from_scene |
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""" |
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if len(filelist) < 2: |
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raise gradio.Error("Please input at least 2 images.") |
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images = Images(filelist=filelist, device=device) |
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cog_seg_maps, rev_cog_seg_maps, cog_feats = get_cog_feats(images) |
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imgs = load_images(images, rev_cog_seg_maps, size=512, verbose=not silent) |
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if len(imgs) == 1: |
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imgs = [imgs[0], copy.deepcopy(imgs[0])] |
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imgs[1]['idx'] = 1 |
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if scenegraph_type == "swin": |
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scenegraph_type = scenegraph_type + "-" + str(winsize) |
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elif scenegraph_type == "oneref": |
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scenegraph_type = scenegraph_type + "-" + str(refid) |
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pairs = make_pairs(imgs, scene_graph=scenegraph_type, prefilter=None, symmetrize=True) |
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output = inference(pairs, pe3r.mast3r, device, batch_size=1, verbose=not silent) |
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mode = GlobalAlignerMode.PointCloudOptimizer if len(imgs) > 2 else GlobalAlignerMode.PairViewer |
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scene_1 = global_aligner(output, cog_seg_maps, rev_cog_seg_maps, cog_feats, device=device, mode=mode, verbose=not silent) |
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lr = 0.01 |
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loss = scene_1.compute_global_alignment(tune_flg=True, init='mst', niter=niter, schedule=schedule, lr=lr) |
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try: |
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ImgNorm = tvf.Compose([tvf.ToTensor(), tvf.Normalize((0.5, 0.5, 0.5), (0.5, 0.5, 0.5))]) |
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for i in range(len(imgs)): |
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|
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imgs[i]['img'] = ImgNorm(scene_1.imgs[i])[None] |
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pairs = make_pairs(imgs, scene_graph=scenegraph_type, prefilter=None, symmetrize=True) |
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output = inference(pairs, pe3r.mast3r, device, batch_size=1, verbose=not silent) |
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mode = GlobalAlignerMode.PointCloudOptimizer if len(imgs) > 2 else GlobalAlignerMode.PairViewer |
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scene = global_aligner(output, cog_seg_maps, rev_cog_seg_maps, cog_feats, device=device, mode=mode, verbose=not silent) |
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ori_imgs = scene.ori_imgs |
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lr = 0.01 |
|
|
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loss = scene.compute_global_alignment(tune_flg=False, init='mst', niter=niter, schedule=schedule, lr=lr) |
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except Exception as e: |
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scene = scene_1 |
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scene.imgs = ori_imgs |
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scene.ori_imgs = ori_imgs |
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print(e) |
|
|
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outfile = get_3D_model_from_scene(outdir, scene, min_conf_thr, as_pointcloud, mask_sky, |
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clean_depth, transparent_cams, cam_size) |
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torch.cuda.empty_cache() |
|
|
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return scene, outfile |
|
|
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@spaces.GPU(duration=180) |
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def get_3D_object_from_scene(outdir, text, threshold, scene, min_conf_thr, as_pointcloud, |
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mask_sky, clean_depth, transparent_cams, cam_size): |
|
|
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texts = [text] |
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inputs = pe3r.siglip_tokenizer(text=texts, padding="max_length", return_tensors="pt") |
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inputs = {key: value.to(device) for key, value in inputs.items()} |
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with torch.no_grad(): |
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text_feats =pe3r.siglip.get_text_features(**inputs) |
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text_feats = text_feats / text_feats.norm(dim=-1, keepdim=True) |
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scene.render_image(text_feats, threshold) |
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scene.ori_imgs = scene.rendered_imgs |
|
outfile = get_3D_model_from_scene(outdir, scene, min_conf_thr, as_pointcloud, mask_sky, |
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clean_depth, transparent_cams, cam_size) |
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return outfile |
|
|
|
|
|
with tempfile.TemporaryDirectory(suffix='pe3r_gradio_demo') as tmpdirname: |
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recon_fun = functools.partial(get_reconstructed_scene, tmpdirname) |
|
|
|
get_3D_object_from_scene_fun = functools.partial(get_3D_object_from_scene, tmpdirname) |
|
|
|
with gradio.Blocks(css=""".gradio-container {margin: 0 !important; min-width: 100%};""", title="PE3R Demo") as demo: |
|
|
|
scene = gradio.State(None) |
|
gradio.HTML('<h2 style="text-align: center;">PE3R Demo</h2>') |
|
with gradio.Column(): |
|
inputfiles = gradio.File(file_count="multiple") |
|
with gradio.Row(): |
|
schedule = gradio.Dropdown(["linear", "cosine"], |
|
value='linear', label="schedule", info="For global alignment!", |
|
visible=False) |
|
niter = gradio.Number(value=300, precision=0, minimum=0, maximum=5000, |
|
label="num_iterations", info="For global alignment!", |
|
visible=False) |
|
scenegraph_type = gradio.Dropdown([("complete: all possible image pairs", "complete"), |
|
("swin: sliding window", "swin"), |
|
("oneref: match one image with all", "oneref")], |
|
value='complete', label="Scenegraph", |
|
info="Define how to make pairs", |
|
interactive=True, |
|
visible=False) |
|
winsize = gradio.Slider(label="Scene Graph: Window Size", value=1, |
|
minimum=1, maximum=1, step=1, visible=False) |
|
refid = gradio.Slider(label="Scene Graph: Id", value=0, minimum=0, maximum=0, step=1, visible=False) |
|
|
|
run_btn = gradio.Button("Reconstruct") |
|
|
|
with gradio.Row(): |
|
|
|
min_conf_thr = gradio.Slider(label="min_conf_thr", value=3.0, minimum=1.0, maximum=20, step=0.1, visible=False) |
|
|
|
cam_size = gradio.Slider(label="cam_size", value=0.05, minimum=0.001, maximum=0.1, step=0.001, visible=False) |
|
with gradio.Row(): |
|
as_pointcloud = gradio.Checkbox(value=True, label="As pointcloud", visible=False) |
|
|
|
mask_sky = gradio.Checkbox(value=False, label="Mask sky", visible=False) |
|
clean_depth = gradio.Checkbox(value=True, label="Clean-up depthmaps", visible=False) |
|
transparent_cams = gradio.Checkbox(value=True, label="Transparent cameras", visible=False) |
|
|
|
with gradio.Row(): |
|
text_input = gradio.Textbox(label="Query Text") |
|
threshold = gradio.Slider(label="Threshold", value=0.85, minimum=0.0, maximum=1.0, step=0.01) |
|
|
|
find_btn = gradio.Button("Find") |
|
|
|
outmodel = gradio.Model3D() |
|
|
|
|
|
run_btn.click(fn=recon_fun, |
|
inputs=[inputfiles, schedule, niter, min_conf_thr, as_pointcloud, |
|
mask_sky, clean_depth, transparent_cams, cam_size, |
|
scenegraph_type, winsize, refid], |
|
outputs=[scene, outmodel]) |
|
|
|
find_btn.click(fn=get_3D_object_from_scene_fun, |
|
inputs=[text_input, threshold, scene, min_conf_thr, as_pointcloud, mask_sky, |
|
clean_depth, transparent_cams, cam_size], |
|
outputs=outmodel) |
|
demo.launch(show_error=True, share=None, server_name=None, server_port=None) |
|
|