dataset_info:
features:
- name: id
dtype: string
- name: sequence
dtype: string
- name: name
dtype: string
- name: description
dtype: string
- name: features
dtype: int64
- name: seq_length
dtype: int64
splits:
- name: train
num_bytes: 6621468623
num_examples: 2602437
download_size: 2319826398
dataset_size: 6621468623
configs:
- config_name: default
data_files:
- split: train
path: data/train-*
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Dataset Card for virus_dna_dataset
Table of Contents
- Dataset Description
- Dataset Structure
- Dataset Creation
- Considerations for Using the Data
- Additional Information
Dataset Description
- Homepage: [Needs More Information]
- Repository: [Needs More Information]
- Paper: [Needs More Information]
- Leaderboard: [Needs More Information]
- Point of Contact: [Needs More Information]
Dataset Summary
A collection of full virus genome dna, the dataset was built from NCBI data
Supported Tasks and Leaderboards
[Needs More Information]
Languages
DNA
Dataset Structure
Data Instances
{ 'Description' : 'NC_030848.1 Haloarcula californiae icosahedral...', 'dna_sequence' : 'TCATCTC TCTCTCT CTCTCTT GTTCCCG CGCCCGC CCGCCC...', 'sequence_length':'35787', 'organism_id':' AB063393.2'}
Data Fields
{ 'Description' : 'this contains the description about the DNA sequence contained in the NCBI dataset', 'dna_sequence' : 'this contains the dna sequence grouped by 7 nucleotides', 'sequence_length':'this contains the length of the dna sequence'}
Data Splits
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Dataset Creation
Curation Rationale
The goal of this dataset was to make it easier to train an LLM on virus DNA
Source Data
Initial Data Collection and Normalization
DNA sequences were grouped by 7 nucleotides to make it easier to tokenize. Only full genomes were selected
Who are the source language producers?
Viruses :)
Annotations
Annotation process
NCBI
Who are the annotators?
NCBI
Personal and Sensitive Information
N/A
Considerations for Using the Data
Social Impact of Dataset
Make it easier to train LLMs on virus DNA
Discussion of Biases
Only virus data that has been sequenced and upload into NCBI is contained in here
Other Known Limitations
[Needs More Information]
Additional Information
Dataset Curators
Hassan Ahmed
Licensing Information
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Citation Information
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