JuIm/Biological_Process · Datasets at Hugging Face

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de novo' IMP biosynthetic process glutamine metabolic process purine nucleobase biosynthetic process purine nucleotide biosynthetic process
de novo' IMP biosynthetic process
guanosine tetraphosphate biosynthetic process guanosine tetraphosphate metabolic process nucleobase-containing small molecule interconversion phosphorylation response to starvation
DNA-templated transcription termination
cytoplasmic translation response to antibiotic ribosomal large subunit assembly
cytoplasmic translation ribosomal small subunit assembly translation
cytoplasmic translation response to antibiotic ribosomal small subunit assembly
cytoplasmic translation negative regulation of cytoplasmic translation positive regulation of cytoplasmic translation ribosomal small subunit assembly RNA secondary structure unwinding translation
localization maintenance of unfolded protein protein folding protein localization protein targeting protein tetramerization protein transport protein transport by the Sec complex
intracellular protein transmembrane transport protein insertion into membrane from inner side protein targeting protein transport protein transport by the Sec complex
intracellular protein transmembrane transport protein insertion into membrane from inner side protein targeting protein transport protein transport by the Sec complex
intracellular protein transmembrane transport intracellular protein transport protein insertion into membrane from inner side protein secretion protein transport by the Sec complex SRP-dependent cotranslational protein targeting to membrane, translocation
intracellular protein transmembrane transport intracellular protein transport protein insertion into membrane from inner side protein secretion protein transport by the Sec complex SRP-dependent cotranslational protein targeting to membrane, translocation
intracellular protein transmembrane transport intracellular protein transport protein insertion into membrane from inner side protein transport by the Sec complex SRP-dependent cotranslational protein targeting to membrane, translocation
amino acid biosynthetic process dephosphorylation L-serine biosynthetic process
DNA recombination DNA-templated transcription DNA-templated transcription initiation regulation of DNA-templated transcription regulation of DNA-templated transcription initiation regulation of gene expression response to heat
cellular response to cell envelope stress DNA-templated transcription initiation negative regulation of DNA-templated transcription regulation of DNA-templated transcription regulation of DNA-templated transcription initiation response to osmotic stress response to temperature stimulus submerged biofilm formation
carbohydrate transport glucose-6-phosphate transport hexose phosphate transport phosphate ion transmembrane transport
cell wall organization peptidoglycan catabolic process
removal of superoxide radicals superoxide metabolic process
removal of superoxide radicals response to superoxide superoxide metabolic process
protein targeting to membrane SRP-dependent cotranslational protein targeting to membrane
DNA-templated DNA replication mismatch repair positive regulation of catalytic activity recombinational repair SOS response
amino acid transport serine transport threonine transport
tricarboxylic acid cycle
D-xylose transmembrane transport transmembrane transport
isoleucine biosynthetic process L-serine catabolic process L-threonine catabolic process to propionate threonine catabolic process
acyl-CoA metabolic process fatty acid catabolic process
D-ribose transmembrane transport
wobble position cytosine ribose methylation wobble position uridine ribose methylation
tRNA aminoacylation tyrosyl-tRNA aminoacylation
uracil import across plasma membrane uracil transport
cytoplasmic translation
defense response to bacterium killing of cells of another organism
acetyl-CoA catabolic process brown fat cell differentiation butyryl-CoA catabolic process coenzyme A catabolic process malonyl-CoA catabolic process medium-chain fatty-acyl-CoA catabolic process nucleoside diphosphate metabolic process propionyl-CoA catabolic process propionyl-CoA metabolic process succinyl-CoA catabolic process
adenosine 5'-(hexahydrogen pentaphosphate) catabolic process diadenosine hexaphosphate catabolic process diadenosine pentaphosphate catabolic process diphosphoinositol polyphosphate metabolic process
adenosine 5'-(hexahydrogen pentaphosphate) catabolic process diadenosine hexaphosphate catabolic process diadenosine pentaphosphate catabolic process diphosphoinositol polyphosphate metabolic process
negative regulation of cytoskeleton organization suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of host RIG-I activity
negative regulation of translation protein stabilization response to heat
protein stabilization response to heat stress response to copper ion
cellular response to amino acid starvation mRNA catabolic process negative regulation of translation regulation of DNA-templated transcription regulation of growth response to antibiotic single-species biofilm formation
DNA-templated transcription regulation of DNA-templated transcription regulation of growth single-species biofilm formation
cardiolipin biosynthetic process dephosphorylation negative regulation of insulin secretion involved in cellular response to glucose stimulus regulation of intrinsic apoptotic signaling pathway
behavioral response to pain intracellular protein transport negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II potassium ion transport regulation of neuron apoptotic process regulation of potassium ion transmembrane transport response to pain sensory perception of pain
division septum site selection negative regulation of division septum assembly negative regulation of protein polymerization regulation of DNA-templated transcription
autophagosome maturation autophagy late endosome to lysosome transport late endosome to vacuole transport via multivesicular body sorting pathway membrane fission midbody abscission mitotic metaphase chromosome alignment multivesicular body assembly multivesicular body sorting pathway multivesicular body-lysosome fusion nuclear membrane reassembly nucleus organization plasma membrane repair protein transport regulation of mitotic spindle assembly regulation of protein catabolic process ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway vesicle budding from membrane vesicle fusion with vacuole viral budding from plasma membrane viral budding via host ESCRT complex
negative regulation of ER-associated ubiquitin-dependent protein catabolic process negative regulation of ERAD pathway negative regulation of protein-containing complex assembly negative regulation of retrograde protein transport, ER to cytosol negative regulation of ubiquitin-dependent protein catabolic process negative regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly positive regulation of autophagy positive regulation of protein lipidation
glucose metabolic process glycolytic process NADH regeneration
evasion of host immune response programmed cell death induced by symbiont proteolysis symbiont-mediated suppression of host autophagy
evasion of host immune response programmed cell death induced by symbiont protein maturation proteolysis symbiont-mediated suppression of host autophagy
phosphorylation
hyperosmotic response response to hydroperoxide response to oxidative stress
amino acid transport cellular hyperosmotic response cellular hyperosmotic salinity response glycine betaine transport osmosensory signaling pathway proline import across plasma membrane
RNA methylation
intracellular water homeostasis monoatomic ion transmembrane transport protein homooligomerization
cellular response to estradiol stimulus positive regulation of transcription by RNA polymerase II
cellular response to estradiol stimulus chromatin organization positive regulation of transcription by RNA polymerase II
cellular response to estradiol stimulus cellular response to insulin stimulus chromatin organization positive regulation of transcription by RNA polymerase II
cellular response to estradiol stimulus cellular response to insulin stimulus positive regulation of transcription by RNA polymerase II
cellular response to lipopolysaccharide negative regulation of non-canonical NF-kappaB signal transduction positive regulation of canonical NF-kappaB signal transduction positive regulation of transcription by RNA polymerase II regulation of cytokine production regulation of macrophage cytokine production response to lipopolysaccharide
inositol trisphosphate metabolic process necroptotic process neural tube development phosphorylation
determination of left/right symmetry heart development in utero embryonic development innate immune response kidney development
cytoplasmic translation
peptidoglycan biosynthetic process peptidoglycan metabolic process proteolysis response to xenobiotic stimulus
chaperone-mediated protein folding protein folding protein quality control for misfolded or incompletely synthesized proteins proteolysis response to heat response to oxidative stress response to temperature stimulus
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) translation
fusion of virus membrane with host plasma membrane
cytoplasmic translation ribosomal large subunit assembly
cytoplasmic translation maturation of SSU-rRNA positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay ribosomal small subunit assembly rRNA export from nucleus
chaperone cofactor-dependent protein refolding protein refolding response to heat
branching morphogenesis of an epithelial tube cilium assembly determination of left/right symmetry epithelial tube branching involved in lung morphogenesis head development heart development kidney development negative regulation of centrosome duplication non-canonical Wnt signaling pathway photoreceptor cell outer segment organization positive regulation of ERAD pathway positive regulation of non-motile cilium assembly ubiquitin-dependent ERAD pathway
collagen-activated signaling pathway collagen-activated tyrosine kinase receptor signaling pathway platelet aggregation
positive regulation of synapse assembly regulation of postsynaptic density assembly regulation of presynapse assembly synaptic membrane adhesion
pectin catabolic process symbiont-mediated disruption of host cell wall
cell wall modification pectin catabolic process
carbohydrate catabolic process
defense response to bacterium
DNA-templated transcription modulation by virus of host chromatin organization negative regulation of peptidyl-threonine phosphorylation positive regulation of transcription elongation by RNA polymerase II positive regulation of viral transcription suppression by virus of host translation initiation suppression by virus of host type I interferon-mediated signaling pathway
DNA-templated transcription modulation by virus of host chromatin organization negative regulation of peptidyl-threonine phosphorylation positive regulation of transcription elongation by RNA polymerase II positive regulation of viral transcription suppression by virus of host translation initiation suppression by virus of host type I interferon-mediated signaling pathway
DNA-templated transcription modulation by virus of host chromatin organization negative regulation of peptidyl-threonine phosphorylation positive regulation of transcription elongation by RNA polymerase II positive regulation of viral transcription suppression by virus of host translation initiation suppression by virus of host type I interferon-mediated signaling pathway
DNA-templated transcription modulation by virus of host chromatin organization negative regulation of peptidyl-threonine phosphorylation positive regulation of transcription elongation by RNA polymerase II positive regulation of viral transcription suppression by virus of host translation initiation suppression by virus of host type I interferon-mediated signaling pathway
DNA-templated transcription modulation by virus of host chromatin organization negative regulation of peptidyl-threonine phosphorylation positive regulation of transcription elongation by RNA polymerase II positive regulation of viral transcription suppression by virus of host translation initiation suppression by virus of host type I interferon-mediated signaling pathway
DNA-templated transcription modulation by virus of host chromatin organization negative regulation of peptidyl-threonine phosphorylation positive regulation of transcription elongation by RNA polymerase II positive regulation of viral transcription suppression by virus of host translation initiation suppression by virus of host type I interferon-mediated signaling pathway
viral budding via host ESCRT complex
metabolic process negative regulation of cAMP-mediated signaling negative regulation of cGMP-mediated signaling signal transduction
membrane organization phosphatidylcholine acyl-chain remodeling platelet activating factor biosynthetic process
female meiotic nuclear division female pronucleus assembly mitotic cell cycle negative regulation of oocyte maturation phosphorylation positive regulation of phosphorylation regulation of fertilization regulation of meiosis I
arachidonic acid metabolic process cannabinoid biosynthetic process diacylglycerol catabolic process icosanoid metabolic process monoacylglycerol biosynthetic process neuroblast proliferation neurogenesis positive regulation of triglyceride catabolic process prostaglandin biosynthetic process regulation of inflammatory response
protein processing proteolysis
anterior/posterior pattern specification dorsal/ventral pattern formation embryonic skeletal system morphogenesis facial nerve structural organization morphogenesis of an epithelial sheet neural nucleus development positive regulation of transcription by RNA polymerase II rhombomere 3 development rhombomere 4 development skeletal system morphogenesis
proteolysis
phosphorylation positive regulation of Notch signaling pathway presynaptic endocytosis protein stabilization regulation of clathrin-dependent endocytosis regulation of protein localization
apoptotic signaling pathway chromatin remodeling DNA recombination DNA repair male gonad development positive regulation of apoptotic process positive regulation of DNA repair positive regulation of DNA-templated transcription positive regulation of telomere maintenance in response to DNA damage regulation of cell cycle regulation of chromosome organization regulation of DNA repair regulation of DNA replication regulation of DNA strand elongation regulation of embryonic development telomere maintenance
mRNA transport
mRNA transport
viral process
proteolysis suppression by virus of host gene expression
killing of cells of another organism
biomineral tissue development bone development brain development cellular response to insulin stimulus cognition glucose homeostasis learning or memory negative regulation of bone development positive regulation of neurotransmitter secretion regulation of bone mineralization regulation of cellular response to insulin stimulus regulation of testosterone biosynthetic process response to vitamin K type B pancreatic cell proliferation
biomineral tissue development bone development brain development cellular response to insulin stimulus cognition glucose homeostasis learning or memory negative regulation of bone development positive regulation of neurotransmitter secretion regulation of bone mineralization regulation of cellular response to insulin stimulus regulation of testosterone biosynthetic process response to vitamin K type B pancreatic cell proliferation

de novo' IMP biosynthetic process glutamine metabolic process purine nucleobase biosynthetic process purine nucleotide biosynthetic process

de novo' IMP biosynthetic process

guanosine tetraphosphate biosynthetic process guanosine tetraphosphate metabolic process nucleobase-containing small molecule interconversion phosphorylation response to starvation

DNA-templated transcription termination

cytoplasmic translation response to antibiotic ribosomal large subunit assembly

cytoplasmic translation ribosomal small subunit assembly translation

cytoplasmic translation response to antibiotic ribosomal small subunit assembly

cytoplasmic translation negative regulation of cytoplasmic translation positive regulation of cytoplasmic translation ribosomal small subunit assembly RNA secondary structure unwinding translation

localization maintenance of unfolded protein protein folding protein localization protein targeting protein tetramerization protein transport protein transport by the Sec complex

intracellular protein transmembrane transport protein insertion into membrane from inner side protein targeting protein transport protein transport by the Sec complex

intracellular protein transmembrane transport intracellular protein transport protein insertion into membrane from inner side protein secretion protein transport by the Sec complex SRP-dependent cotranslational protein targeting to membrane, translocation

intracellular protein transmembrane transport intracellular protein transport protein insertion into membrane from inner side protein transport by the Sec complex SRP-dependent cotranslational protein targeting to membrane, translocation

amino acid biosynthetic process dephosphorylation L-serine biosynthetic process

DNA recombination DNA-templated transcription DNA-templated transcription initiation regulation of DNA-templated transcription regulation of DNA-templated transcription initiation regulation of gene expression response to heat

cellular response to cell envelope stress DNA-templated transcription initiation negative regulation of DNA-templated transcription regulation of DNA-templated transcription regulation of DNA-templated transcription initiation response to osmotic stress response to temperature stimulus submerged biofilm formation

carbohydrate transport glucose-6-phosphate transport hexose phosphate transport phosphate ion transmembrane transport

cell wall organization peptidoglycan catabolic process

removal of superoxide radicals superoxide metabolic process

removal of superoxide radicals response to superoxide superoxide metabolic process

protein targeting to membrane SRP-dependent cotranslational protein targeting to membrane

DNA-templated DNA replication mismatch repair positive regulation of catalytic activity recombinational repair SOS response

amino acid transport serine transport threonine transport

tricarboxylic acid cycle

D-xylose transmembrane transport transmembrane transport

isoleucine biosynthetic process L-serine catabolic process L-threonine catabolic process to propionate threonine catabolic process

acyl-CoA metabolic process fatty acid catabolic process

D-ribose transmembrane transport

wobble position cytosine ribose methylation wobble position uridine ribose methylation

tRNA aminoacylation tyrosyl-tRNA aminoacylation

uracil import across plasma membrane uracil transport

cytoplasmic translation

defense response to bacterium killing of cells of another organism

acetyl-CoA catabolic process brown fat cell differentiation butyryl-CoA catabolic process coenzyme A catabolic process malonyl-CoA catabolic process medium-chain fatty-acyl-CoA catabolic process nucleoside diphosphate metabolic process propionyl-CoA catabolic process propionyl-CoA metabolic process succinyl-CoA catabolic process

adenosine 5'-(hexahydrogen pentaphosphate) catabolic process diadenosine hexaphosphate catabolic process diadenosine pentaphosphate catabolic process diphosphoinositol polyphosphate metabolic process

negative regulation of cytoskeleton organization suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of host RIG-I activity

negative regulation of translation protein stabilization response to heat

protein stabilization response to heat stress response to copper ion

cellular response to amino acid starvation mRNA catabolic process negative regulation of translation regulation of DNA-templated transcription regulation of growth response to antibiotic single-species biofilm formation

DNA-templated transcription regulation of DNA-templated transcription regulation of growth single-species biofilm formation

cardiolipin biosynthetic process dephosphorylation negative regulation of insulin secretion involved in cellular response to glucose stimulus regulation of intrinsic apoptotic signaling pathway

behavioral response to pain intracellular protein transport negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II potassium ion transport regulation of neuron apoptotic process regulation of potassium ion transmembrane transport response to pain sensory perception of pain

division septum site selection negative regulation of division septum assembly negative regulation of protein polymerization regulation of DNA-templated transcription

autophagosome maturation autophagy late endosome to lysosome transport late endosome to vacuole transport via multivesicular body sorting pathway membrane fission midbody abscission mitotic metaphase chromosome alignment multivesicular body assembly multivesicular body sorting pathway multivesicular body-lysosome fusion nuclear membrane reassembly nucleus organization plasma membrane repair protein transport regulation of mitotic spindle assembly regulation of protein catabolic process ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway vesicle budding from membrane vesicle fusion with vacuole viral budding from plasma membrane viral budding via host ESCRT complex

negative regulation of ER-associated ubiquitin-dependent protein catabolic process negative regulation of ERAD pathway negative regulation of protein-containing complex assembly negative regulation of retrograde protein transport, ER to cytosol negative regulation of ubiquitin-dependent protein catabolic process negative regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly positive regulation of autophagy positive regulation of protein lipidation

glucose metabolic process glycolytic process NADH regeneration

evasion of host immune response programmed cell death induced by symbiont proteolysis symbiont-mediated suppression of host autophagy

evasion of host immune response programmed cell death induced by symbiont protein maturation proteolysis symbiont-mediated suppression of host autophagy

phosphorylation

hyperosmotic response response to hydroperoxide response to oxidative stress

amino acid transport cellular hyperosmotic response cellular hyperosmotic salinity response glycine betaine transport osmosensory signaling pathway proline import across plasma membrane

RNA methylation

intracellular water homeostasis monoatomic ion transmembrane transport protein homooligomerization

cellular response to estradiol stimulus positive regulation of transcription by RNA polymerase II

cellular response to estradiol stimulus chromatin organization positive regulation of transcription by RNA polymerase II

cellular response to estradiol stimulus cellular response to insulin stimulus chromatin organization positive regulation of transcription by RNA polymerase II

cellular response to estradiol stimulus cellular response to insulin stimulus positive regulation of transcription by RNA polymerase II

cellular response to lipopolysaccharide negative regulation of non-canonical NF-kappaB signal transduction positive regulation of canonical NF-kappaB signal transduction positive regulation of transcription by RNA polymerase II regulation of cytokine production regulation of macrophage cytokine production response to lipopolysaccharide

inositol trisphosphate metabolic process necroptotic process neural tube development phosphorylation

determination of left/right symmetry heart development in utero embryonic development innate immune response kidney development

cytoplasmic translation

peptidoglycan biosynthetic process peptidoglycan metabolic process proteolysis response to xenobiotic stimulus

chaperone-mediated protein folding protein folding protein quality control for misfolded or incompletely synthesized proteins proteolysis response to heat response to oxidative stress response to temperature stimulus

endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) translation

fusion of virus membrane with host plasma membrane

cytoplasmic translation ribosomal large subunit assembly

cytoplasmic translation maturation of SSU-rRNA positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay ribosomal small subunit assembly rRNA export from nucleus

chaperone cofactor-dependent protein refolding protein refolding response to heat

branching morphogenesis of an epithelial tube cilium assembly determination of left/right symmetry epithelial tube branching involved in lung morphogenesis head development heart development kidney development negative regulation of centrosome duplication non-canonical Wnt signaling pathway photoreceptor cell outer segment organization positive regulation of ERAD pathway positive regulation of non-motile cilium assembly ubiquitin-dependent ERAD pathway

collagen-activated signaling pathway collagen-activated tyrosine kinase receptor signaling pathway platelet aggregation

positive regulation of synapse assembly regulation of postsynaptic density assembly regulation of presynapse assembly synaptic membrane adhesion

pectin catabolic process symbiont-mediated disruption of host cell wall

cell wall modification pectin catabolic process

carbohydrate catabolic process

defense response to bacterium

DNA-templated transcription modulation by virus of host chromatin organization negative regulation of peptidyl-threonine phosphorylation positive regulation of transcription elongation by RNA polymerase II positive regulation of viral transcription suppression by virus of host translation initiation suppression by virus of host type I interferon-mediated signaling pathway

viral budding via host ESCRT complex

metabolic process negative regulation of cAMP-mediated signaling negative regulation of cGMP-mediated signaling signal transduction

membrane organization phosphatidylcholine acyl-chain remodeling platelet activating factor biosynthetic process

female meiotic nuclear division female pronucleus assembly mitotic cell cycle negative regulation of oocyte maturation phosphorylation positive regulation of phosphorylation regulation of fertilization regulation of meiosis I

arachidonic acid metabolic process cannabinoid biosynthetic process diacylglycerol catabolic process icosanoid metabolic process monoacylglycerol biosynthetic process neuroblast proliferation neurogenesis positive regulation of triglyceride catabolic process prostaglandin biosynthetic process regulation of inflammatory response

protein processing proteolysis

anterior/posterior pattern specification dorsal/ventral pattern formation embryonic skeletal system morphogenesis facial nerve structural organization morphogenesis of an epithelial sheet neural nucleus development positive regulation of transcription by RNA polymerase II rhombomere 3 development rhombomere 4 development skeletal system morphogenesis

proteolysis

phosphorylation positive regulation of Notch signaling pathway presynaptic endocytosis protein stabilization regulation of clathrin-dependent endocytosis regulation of protein localization

apoptotic signaling pathway chromatin remodeling DNA recombination DNA repair male gonad development positive regulation of apoptotic process positive regulation of DNA repair positive regulation of DNA-templated transcription positive regulation of telomere maintenance in response to DNA damage regulation of cell cycle regulation of chromosome organization regulation of DNA repair regulation of DNA replication regulation of DNA strand elongation regulation of embryonic development telomere maintenance

mRNA transport

viral process

proteolysis suppression by virus of host gene expression

killing of cells of another organism

biomineral tissue development bone development brain development cellular response to insulin stimulus cognition glucose homeostasis learning or memory negative regulation of bone development positive regulation of neurotransmitter secretion regulation of bone mineralization regulation of cellular response to insulin stimulus regulation of testosterone biosynthetic process response to vitamin K type B pancreatic cell proliferation