JuIm/Biological_Process · Datasets at Hugging Face

text stringlengths 7 1.01k
anaerobic electron transport chain anaerobic respiration
cellular response to amino acid stimulus cellular response to hypoxia cellular response to insulin stimulus cellular response to lipopolysaccharide mRNA processing mRNA transport negative regulation of cell population proliferation negative regulation of cytoplasmic translation negative regulation of translation positive regulation of cell migration positive regulation of neuron projection development positive regulation of nitric-oxide synthase biosynthetic process positive regulation of translation regulation of neuronal synaptic plasticity regulation of translation regulation of translation at synapse, modulating synaptic transmission synaptonemal complex assembly
apoptotic process defense response to bacterium killing of cells of another organism
apoptotic process defense response to bacterium killing of cells of another organism
apoptotic process defense response to bacterium killing of cells of another organism
hemolysis in another organism
chondroitin sulfate biosynthetic process chondroitin sulfate metabolic process dermatan sulfate metabolic process heparan sulfate proteoglycan biosynthetic process
protein complex oligomerization suppression by virus of host autophagy virus-mediated pore formation in host cell membrane
chromatin remodeling DNA repair methylation muscle organ development positive regulation of double-strand break repair via nonhomologous end joining positive regulation of isotype switching
chromatin remodeling DNA repair methylation positive regulation of double-strand break repair via nonhomologous end joining positive regulation of isotype switching
response to antibiotic
cellulose catabolic process
peptide catabolic process proteolysis
anterior commissure morphogenesis cerebral cortex radially oriented cell migration cerebral cortex tangential migration corticospinal tract morphogenesis DNA damage response neuron migration proteasome-mediated ubiquitin-dependent protein catabolic process protein K48-linked ubiquitination protein ubiquitination regulation of synaptic vesicle exocytosis synapse assembly involved in innervation ubiquitin-dependent protein catabolic process
cellular response to histamine chloride transmembrane transport inhibitory synapse assembly
photorespiration reductive pentose-phosphate cycle
photorespiration reductive pentose-phosphate cycle
cellular lipid catabolic process diacylglycerol biosynthetic process lipid droplet disassembly lipid droplet organization lipid homeostasis lipid storage negative regulation of sequestering of triglyceride positive regulation of triglyceride catabolic process triglyceride catabolic process
DNA topological change DNA-templated DNA replication
isoprenoid biosynthetic process
microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response
proteolysis
starch biosynthetic process
enamel mineralization intracellular monoatomic cation homeostasis magnesium ion homeostasis magnesium ion transport response to stimulus sodium ion transmembrane transport visual perception
proteolysis
abscisic acid-activated signaling pathway intracellular signal transduction phosphorylation
cellular response to abscisic acid stimulus cellular response to water deprivation phosphorylation photoperiodism, flowering
actin cytoskeleton organization cell migration cellular response to hypoxia epithelial cell morphogenesis keratinocyte development neuron projection development positive regulation of podosome assembly ruffle organization trophoblast giant cell differentiation
GDP-mannose biosynthetic process protein glycosylation
endosomal lumen acidification Golgi lumen acidification proton transmembrane transport vacuolar acidification
apoptotic process axonogenesis brain development dendrite development metaphase chromosome alignment microtubule anchoring at centrosome microtubule bundle formation microtubule cytoskeleton organization mitotic spindle organization nervous system development neuron projection morphogenesis regulation of microtubule depolymerization
mRNA processing nucleosome assembly
mRNA processing nucleosome assembly
cell growth involved in cardiac muscle cell development cerebellum development cGMP-mediated signaling collateral sprouting dendrite development forebrain development negative regulation of glutamate secretion negative regulation of inositol phosphate biosynthetic process negative regulation of platelet aggregation negative regulation of smooth muscle contraction negative regulation of vascular associated smooth muscle cell migration negative regulation of vascular associated smooth muscle cell proliferation neuron migration positive regulation of circadian rhythm positive regulation of cytosolic calcium ion concentration protein phosphorylation regulation of GTPase activity regulation of testosterone biosynthetic process relaxation of vascular associated smooth muscle signal transduction spermatid development
negative regulation of transcription by RNA polymerase II regulation of cell cycle regulation of cell division regulation of DNA repair regulation of DNA-templated transcription regulation of embryonic development regulation of transcription by RNA polymerase II regulation of tubulin deacetylation transcription initiation-coupled chromatin remodeling
microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response
autophagosome assembly establishment of mitotic spindle orientation Golgi organization membrane fusion negative regulation of protein localization to centrosome nuclear membrane reassembly positive regulation of mitotic centrosome separation proteasome-mediated ubiquitin-dependent protein catabolic process
microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response
microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response
proteolysis
proteolysis
apoptotic process proteolysis
ganglioside catabolic process oligosaccharide catabolic process
microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response
microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response
microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response
microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response
microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response
microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response
microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response
microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response
microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response
microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response
microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response
viral entry into host cell viral penetration into host nucleus
apoptotic process branching involved in prostate gland morphogenesis epithelial cell maturation epithelial cell maturation involved in prostate gland development proteasome-mediated ubiquitin-dependent protein catabolic process protein ubiquitination regulation of DNA damage checkpoint regulation of extrinsic apoptotic signaling pathway via death domain receptors ubiquitin-dependent protein catabolic process via the C-end degron rule pathway
angiogenesis cell differentiation chemotaxis proteolysis
adaptive immune response alpha-beta T cell differentiation positive regulation of apoptotic process positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway postsynapse to nucleus signaling pathway regulation of transcription by RNA polymerase I T cell differentiation in thymus
protein complex oligomerization virus-mediated pore formation in host cell membrane
chromatin remodeling double-strand break repair involved in meiotic recombination female gamete generation homologous chromosome pairing at meiosis male gamete generation meiosis I meiotic gene conversion methylation negative regulation of apoptotic process positive regulation of fertilization positive regulation of meiosis I positive regulation of reciprocal meiotic recombination positive regulation of transcription by RNA polymerase II regulation of gene expression spermatogenesis
viral process
proteolysis viral procapsid maturation
lipid modification peptidyl-serine octanoylation protein acylation protein decanoylation protein octanoylation
proteolysis
proteolysis
alanine biosynthetic process pantothenate biosynthetic process
protein maturation by cluster transfer
cellular response to magnesium ion cellular response to manganese ion mRNA catabolic process platelet maturation rRNA catabolic process
regulation of blood pressure vasodilation
adenylate cyclase-modulating G protein-coupled receptor signaling pathway detection of chemical stimulus involved in sensory perception of bitter taste sensory perception of sweet taste sensory perception of umami taste
chloroplast mRNA modification chloroplast RNA modification mRNA processing
cellular biosynthetic process organic substance biosynthetic process protein modification process
anatomical structure development brain development extracellular matrix organization learning lung alveolus development memory negative regulation of transcription by RNA polymerase II positive regulation of hematopoietic stem cell proliferation regulation of DNA-templated transcription social behavior transcription by RNA polymerase II
anatomical structure development brain development extracellular matrix organization learning lung alveolus development memory negative regulation of transcription by RNA polymerase II positive regulation of hematopoietic stem cell proliferation regulation of DNA-templated transcription social behavior transcription by RNA polymerase II
calcineurin-NFAT signaling cascade cell cycle cell differentiation cellular response to growth factor stimulus cellular response to hydrogen peroxide cellular response to laminar fluid shear stress cellular response to transforming growth factor beta stimulus ERK5 cascade intracellular signal transduction MAPK cascade negative regulation of apoptotic process negative regulation of calcineurin-NFAT signaling cascade negative regulation of endothelial cell apoptotic process negative regulation of ERK5 cascade negative regulation of extrinsic apoptotic signaling pathway in absence of ligand negative regulation of heterotypic cell-cell adhesion negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway negative regulation of response to cytokine stimulus negative regulation of smooth muscle cell apoptotic process phosphorylation positive regulation of protein metabolic process positive regulation of transcription by RNA polymerase II regulation of angiogenesis
arachidonic acid metabolic process calcium-mediated signaling glycerophospholipid catabolic process inflammatory response parturition phosphatidylcholine acyl-chain remodeling phosphatidylethanolamine acyl-chain remodeling phosphatidylglycerol acyl-chain remodeling
protein hydroxylation proteolysis
glycerophospholipid catabolic process
glycerophospholipid biosynthetic process
negative regulation of chemokine activity
negative regulation of chemokine activity
arachidonic acid secretion lipid catabolic process phospholipid metabolic process
defense response to Gram-negative bacterium defense response to Gram-positive bacterium killing of cells of another organism negative regulation of translation
arachidonic acid secretion lipid catabolic process phospholipid metabolic process
farnesyl diphosphate biosynthetic process geranyl diphosphate biosynthetic process geranylgeranyl diphosphate biosynthetic process
farnesyl diphosphate biosynthetic process geranyl diphosphate biosynthetic process geranylgeranyl diphosphate biosynthetic process
farnesyl diphosphate biosynthetic process geranyl diphosphate biosynthetic process geranylgeranyl diphosphate biosynthetic process
intracellular signal transduction maintenance of ER location transcription elongation by RNA polymerase II
angiogenesis arachidonic acid secretion lipid catabolic process phospholipid metabolic process
angiogenesis arachidonic acid secretion lipid catabolic process phospholipid metabolic process
arachidonic acid secretion lipid catabolic process phospholipid metabolic process
arachidonic acid secretion defense response to bacterium lipid catabolic process phospholipid metabolic process
arachidonic acid secretion defense response to bacterium lipid catabolic process phospholipid metabolic process
actin cytoskeleton organization cell junction assembly cell morphogenesis involved in neuron differentiation cerebellar granule cell differentiation cerebral cortex neuron differentiation establishment of epithelial cell apical/basal polarity maintenance of postsynaptic specialization structure negative regulation of proteasomal protein catabolic process neuron differentiation neuron projection development regulation of endocytosis regulation of postsynaptic neurotransmitter receptor internalization regulation of Rho protein signal transduction regulation of synaptic transmission, glutamatergic regulation of synaptic vesicle endocytosis signal transduction synaptic vesicle endocytosis
cell differentiation developmental growth DNA dealkylation involved in DNA repair DNA demethylation DNA repair in utero embryonic development negative regulation of neuron apoptotic process neuron migration neuron projection development oxidative demethylation oxidative RNA demethylation oxidative single-stranded DNA demethylation placenta development regulation of gene expression regulation of mitochondrial translation regulation of translational elongation regulation of translational initiation RNA repair tRNA demethylation tRNA wobble cytosine modification
blastocyst growth embryo implantation positive regulation of transcription by RNA polymerase I transcription by RNA polymerase I
intracellular iron ion homeostasis
positive regulation of synapse assembly regulation of postsynaptic density assembly regulation of presynapse assembly synaptic membrane adhesion
apoptotic process defense response to bacterium envenomation resulting in hemorrhagic damage in another organism killing of cells of another organism
apoptotic process defense response to Gram-negative bacterium defense response to Gram-positive bacterium envenomation resulting in positive regulation of platelet aggregation in another organism killing of cells of another organism modulation of apoptotic process in another organism regulation of platelet aggregation

anaerobic electron transport chain anaerobic respiration

cellular response to amino acid stimulus cellular response to hypoxia cellular response to insulin stimulus cellular response to lipopolysaccharide mRNA processing mRNA transport negative regulation of cell population proliferation negative regulation of cytoplasmic translation negative regulation of translation positive regulation of cell migration positive regulation of neuron projection development positive regulation of nitric-oxide synthase biosynthetic process positive regulation of translation regulation of neuronal synaptic plasticity regulation of translation regulation of translation at synapse, modulating synaptic transmission synaptonemal complex assembly

apoptotic process defense response to bacterium killing of cells of another organism

hemolysis in another organism

chondroitin sulfate biosynthetic process chondroitin sulfate metabolic process dermatan sulfate metabolic process heparan sulfate proteoglycan biosynthetic process

protein complex oligomerization suppression by virus of host autophagy virus-mediated pore formation in host cell membrane

chromatin remodeling DNA repair methylation muscle organ development positive regulation of double-strand break repair via nonhomologous end joining positive regulation of isotype switching

chromatin remodeling DNA repair methylation positive regulation of double-strand break repair via nonhomologous end joining positive regulation of isotype switching

response to antibiotic

cellulose catabolic process

peptide catabolic process proteolysis

anterior commissure morphogenesis cerebral cortex radially oriented cell migration cerebral cortex tangential migration corticospinal tract morphogenesis DNA damage response neuron migration proteasome-mediated ubiquitin-dependent protein catabolic process protein K48-linked ubiquitination protein ubiquitination regulation of synaptic vesicle exocytosis synapse assembly involved in innervation ubiquitin-dependent protein catabolic process

cellular response to histamine chloride transmembrane transport inhibitory synapse assembly

photorespiration reductive pentose-phosphate cycle

cellular lipid catabolic process diacylglycerol biosynthetic process lipid droplet disassembly lipid droplet organization lipid homeostasis lipid storage negative regulation of sequestering of triglyceride positive regulation of triglyceride catabolic process triglyceride catabolic process

DNA topological change DNA-templated DNA replication

isoprenoid biosynthetic process

microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response

proteolysis

starch biosynthetic process

enamel mineralization intracellular monoatomic cation homeostasis magnesium ion homeostasis magnesium ion transport response to stimulus sodium ion transmembrane transport visual perception

proteolysis

abscisic acid-activated signaling pathway intracellular signal transduction phosphorylation

cellular response to abscisic acid stimulus cellular response to water deprivation phosphorylation photoperiodism, flowering

actin cytoskeleton organization cell migration cellular response to hypoxia epithelial cell morphogenesis keratinocyte development neuron projection development positive regulation of podosome assembly ruffle organization trophoblast giant cell differentiation

GDP-mannose biosynthetic process protein glycosylation

endosomal lumen acidification Golgi lumen acidification proton transmembrane transport vacuolar acidification

apoptotic process axonogenesis brain development dendrite development metaphase chromosome alignment microtubule anchoring at centrosome microtubule bundle formation microtubule cytoskeleton organization mitotic spindle organization nervous system development neuron projection morphogenesis regulation of microtubule depolymerization

mRNA processing nucleosome assembly

cell growth involved in cardiac muscle cell development cerebellum development cGMP-mediated signaling collateral sprouting dendrite development forebrain development negative regulation of glutamate secretion negative regulation of inositol phosphate biosynthetic process negative regulation of platelet aggregation negative regulation of smooth muscle contraction negative regulation of vascular associated smooth muscle cell migration negative regulation of vascular associated smooth muscle cell proliferation neuron migration positive regulation of circadian rhythm positive regulation of cytosolic calcium ion concentration protein phosphorylation regulation of GTPase activity regulation of testosterone biosynthetic process relaxation of vascular associated smooth muscle signal transduction spermatid development

negative regulation of transcription by RNA polymerase II regulation of cell cycle regulation of cell division regulation of DNA repair regulation of DNA-templated transcription regulation of embryonic development regulation of transcription by RNA polymerase II regulation of tubulin deacetylation transcription initiation-coupled chromatin remodeling

microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response

autophagosome assembly establishment of mitotic spindle orientation Golgi organization membrane fusion negative regulation of protein localization to centrosome nuclear membrane reassembly positive regulation of mitotic centrosome separation proteasome-mediated ubiquitin-dependent protein catabolic process

microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response

proteolysis

apoptotic process proteolysis

ganglioside catabolic process oligosaccharide catabolic process

microtubule-dependent intracellular transport of viral material towards nucleus viral entry into host cell viral penetration into host nucleus virus-mediated perturbation of host defense response

viral entry into host cell viral penetration into host nucleus

apoptotic process branching involved in prostate gland morphogenesis epithelial cell maturation epithelial cell maturation involved in prostate gland development proteasome-mediated ubiquitin-dependent protein catabolic process protein ubiquitination regulation of DNA damage checkpoint regulation of extrinsic apoptotic signaling pathway via death domain receptors ubiquitin-dependent protein catabolic process via the C-end degron rule pathway

angiogenesis cell differentiation chemotaxis proteolysis

adaptive immune response alpha-beta T cell differentiation positive regulation of apoptotic process positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway postsynapse to nucleus signaling pathway regulation of transcription by RNA polymerase I T cell differentiation in thymus

protein complex oligomerization virus-mediated pore formation in host cell membrane

chromatin remodeling double-strand break repair involved in meiotic recombination female gamete generation homologous chromosome pairing at meiosis male gamete generation meiosis I meiotic gene conversion methylation negative regulation of apoptotic process positive regulation of fertilization positive regulation of meiosis I positive regulation of reciprocal meiotic recombination positive regulation of transcription by RNA polymerase II regulation of gene expression spermatogenesis

viral process

proteolysis viral procapsid maturation

lipid modification peptidyl-serine octanoylation protein acylation protein decanoylation protein octanoylation

proteolysis

alanine biosynthetic process pantothenate biosynthetic process

protein maturation by cluster transfer

cellular response to magnesium ion cellular response to manganese ion mRNA catabolic process platelet maturation rRNA catabolic process

regulation of blood pressure vasodilation

adenylate cyclase-modulating G protein-coupled receptor signaling pathway detection of chemical stimulus involved in sensory perception of bitter taste sensory perception of sweet taste sensory perception of umami taste

chloroplast mRNA modification chloroplast RNA modification mRNA processing

cellular biosynthetic process organic substance biosynthetic process protein modification process

anatomical structure development brain development extracellular matrix organization learning lung alveolus development memory negative regulation of transcription by RNA polymerase II positive regulation of hematopoietic stem cell proliferation regulation of DNA-templated transcription social behavior transcription by RNA polymerase II

calcineurin-NFAT signaling cascade cell cycle cell differentiation cellular response to growth factor stimulus cellular response to hydrogen peroxide cellular response to laminar fluid shear stress cellular response to transforming growth factor beta stimulus ERK5 cascade intracellular signal transduction MAPK cascade negative regulation of apoptotic process negative regulation of calcineurin-NFAT signaling cascade negative regulation of endothelial cell apoptotic process negative regulation of ERK5 cascade negative regulation of extrinsic apoptotic signaling pathway in absence of ligand negative regulation of heterotypic cell-cell adhesion negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway negative regulation of response to cytokine stimulus negative regulation of smooth muscle cell apoptotic process phosphorylation positive regulation of protein metabolic process positive regulation of transcription by RNA polymerase II regulation of angiogenesis

arachidonic acid metabolic process calcium-mediated signaling glycerophospholipid catabolic process inflammatory response parturition phosphatidylcholine acyl-chain remodeling phosphatidylethanolamine acyl-chain remodeling phosphatidylglycerol acyl-chain remodeling

protein hydroxylation proteolysis

glycerophospholipid catabolic process

glycerophospholipid biosynthetic process

negative regulation of chemokine activity

arachidonic acid secretion lipid catabolic process phospholipid metabolic process

defense response to Gram-negative bacterium defense response to Gram-positive bacterium killing of cells of another organism negative regulation of translation

arachidonic acid secretion lipid catabolic process phospholipid metabolic process

farnesyl diphosphate biosynthetic process geranyl diphosphate biosynthetic process geranylgeranyl diphosphate biosynthetic process

intracellular signal transduction maintenance of ER location transcription elongation by RNA polymerase II

angiogenesis arachidonic acid secretion lipid catabolic process phospholipid metabolic process

arachidonic acid secretion lipid catabolic process phospholipid metabolic process

arachidonic acid secretion defense response to bacterium lipid catabolic process phospholipid metabolic process

actin cytoskeleton organization cell junction assembly cell morphogenesis involved in neuron differentiation cerebellar granule cell differentiation cerebral cortex neuron differentiation establishment of epithelial cell apical/basal polarity maintenance of postsynaptic specialization structure negative regulation of proteasomal protein catabolic process neuron differentiation neuron projection development regulation of endocytosis regulation of postsynaptic neurotransmitter receptor internalization regulation of Rho protein signal transduction regulation of synaptic transmission, glutamatergic regulation of synaptic vesicle endocytosis signal transduction synaptic vesicle endocytosis

cell differentiation developmental growth DNA dealkylation involved in DNA repair DNA demethylation DNA repair in utero embryonic development negative regulation of neuron apoptotic process neuron migration neuron projection development oxidative demethylation oxidative RNA demethylation oxidative single-stranded DNA demethylation placenta development regulation of gene expression regulation of mitochondrial translation regulation of translational elongation regulation of translational initiation RNA repair tRNA demethylation tRNA wobble cytosine modification

blastocyst growth embryo implantation positive regulation of transcription by RNA polymerase I transcription by RNA polymerase I

intracellular iron ion homeostasis

positive regulation of synapse assembly regulation of postsynaptic density assembly regulation of presynapse assembly synaptic membrane adhesion

apoptotic process defense response to bacterium envenomation resulting in hemorrhagic damage in another organism killing of cells of another organism

apoptotic process defense response to Gram-negative bacterium defense response to Gram-positive bacterium envenomation resulting in positive regulation of platelet aggregation in another organism killing of cells of another organism modulation of apoptotic process in another organism regulation of platelet aggregation