metadata
dataset_info:
features:
- name: seqs
dtype: string
- name: labels
dtype: int64
splits:
- name: train
num_bytes: 72141633
num_examples: 154336
- name: valid
num_bytes: 2367747
num_examples: 5000
- name: test
num_bytes: 2284093
num_examples: 5000
download_size: 75804271
dataset_size: 76793473
configs:
- config_name: default
data_files:
- split: train
path: data/train-*
- split: valid
path: data/valid-*
- split: test
path: data/test-*
Dataset of proteins that homodimerize (1) and randomly selected proteins from StringDB (0). Data splits are random, but the balance is roughly 90:10. The main assumption is that most proteins do not dimerize with themselves.
Homodimers are selected from here via the 80% identity clustering.
@misc {SynthyraHomodimerBenchmark,
author = { Hallee, L. and Bichara, D. and Gleghorn, J, P. },
title = { Synthyra Homodimer Benchmark },
year = 2024,
url = { https://huggingface.co/datasets/Synthyra/homodimer_benchmark },
doi = { 10.57967/hf/3798 },
publisher = { Hugging Face }
}