| language: | |
| - en | |
| bigbio_language: | |
| - English | |
| license: unknown | |
| multilinguality: monolingual | |
| bigbio_license_shortname: UNKNOWN | |
| pretty_name: tmVar v2 | |
| homepage: https://www.ncbi.nlm.nih.gov/research/bionlp/Tools/tmvar/ | |
| bigbio_pubmed: True | |
| bigbio_public: True | |
| bigbio_tasks: | |
| - NAMED_ENTITY_RECOGNITION | |
| - NAMED_ENTITY_DISAMBIGUATION | |
| # Dataset Card for tmVar v2 | |
| ## Dataset Description | |
| - **Homepage:** https://www.ncbi.nlm.nih.gov/research/bionlp/Tools/tmvar/ | |
| - **Pubmed:** True | |
| - **Public:** True | |
| - **Tasks:** NER,NED | |
| This dataset contains 158 PubMed articles manually annotated with mutation mentions of various kinds and dbsnp normalizations for each of them. | |
| It can be used for NER tasks and NED tasks, This dataset has a single split | |
| ## Citation Information | |
| ``` | |
| @article{wei2018tmvar, | |
| title={tmVar 2.0: integrating genomic variant information from literature with dbSNP and ClinVar for precision medicine}, | |
| author={Wei, Chih-Hsuan and Phan, Lon and Feltz, Juliana and Maiti, Rama and Hefferon, Tim and Lu, Zhiyong}, | |
| journal={Bioinformatics}, | |
| volume={34}, | |
| number={1}, | |
| pages={80--87}, | |
| year={2018}, | |
| publisher={Oxford University Press} | |
| } | |
| ``` | |