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#!/usr/bin/env python # -*- coding: utf-8 -*- r""" ARG model ========= The code is an implementation of ARG model given in [1]_. Its major features include: * simulation of stochastic volatility and returns * estimation using both MLE and GMM * option pricing References ---------- .. [1] <NAME> and <NAME> (2014) "Affine Option Pricing Model in Discrete Time", working paper, New Economic School. <http://goo.gl/yRVsZp> .. [2] <NAME> and <NAME> (2006) "Autoregressive Gamma Processes", 2006, *Journal of Forecasting*, 25(2), 129–152. doi:10.1002/for.978 .. [3] <NAME>, <NAME>, and <NAME> (2006) "Structural Laplace Transform and Compound Autoregressive Models" *Journal of Time Series Analysis*, 27(4), 477–503. doi:10.1111/j.1467-9892.2006.00479.x """ from __future__ import print_function, division import warnings import numpy as np import numexpr as ne import matplotlib.pylab as plt import seaborn as sns import scipy.stats as scs from scipy.optimize import minimize import numdifftools as nd from statsmodels.tsa.tsatools import lagmat from .argparams import ARGparams from .helper_functions import days_from_maturity from mygmm import GMM from fangoosterlee import cosmethod __all__ = ['ARG'] class ARG(object): r"""Class for ARG model. .. math:: E\left[\left.\exp\left\{ -uY_{t}\right\} \right|Y_{t-1}\right] =\exp\left\{ -a(u)Y_{t-1}-b(u)\right\} Attributes ---------- vol Volatility series ret Asset return series param Parameters of the model maturity Maturity of the option or simply time horizon. Fraction of a year, i.e. 30/365 riskfree Risk-free rate of return per day Methods ------- afun a(u) function bfun b(u) function cfun c(u) function plot_abc Vizualize functions a, b, and c vsim Simulate ARG(1) volatility process vsim2 Simulate ARG(1) volatility process rsim Simulate returns given volatility load_data Load data to the class estimate_mle Estimate model parameters via Maximum Likelihood estimate_gmm Estimate model parameters using GMM cos_restriction Restrictions used in COS method of option pricing charfun Risk-neutral conditional characteristic function (one argument only) option_premium Model implied option premium via COS method """ def __init__(self, param=None): """Initialize class instance. Parameters ---------- param : ARGparams instance, optional Parameters of the model """ self.vol = None self.ret = None self.param = param self.maturity = None self.riskfree = None def convert_to_q(self, param): """Convert physical (P) parameters to risk-neutral (Q) parameters. Parameters ---------- param : ARGparams instance Physical (P) parameters Returns ------- ARGparams instance Risk-neutral parameters """ paramq = ARGparams() paramq.update(theta=param.get_theta(), price_vol=param.price_vol) factor = 1/(1 + param.get_scale() \ * (param.price_vol + self.alpha(param.price_ret, param))) if factor <= 0 or factor > 1/param.rho**.5: print('Lower bound for theta1 is %.2f' % self.vol_price_lower_bound(param)) raise ValueError('Invalid parameters in Q conversion!') delta = param.delta scale = param.get_scale() * factor beta = param.get_beta() * factor rho = scale * beta mean = scale * delta / (1 - rho) paramq.update(theta_vol=[mean, rho, delta]) return paramq def load_data(self, vol=None, ret=None): """Load data into the model object. Parameters ---------- vol : (nobs, ) array Volatility time series ret : (nobs, ) array Return time series """ if vol is not None: self.vol = vol if ret is not None: self.ret = ret def afun(self, uarg, param): r"""Function a(). .. math:: a\left(u\right)=\frac{\rho u}{1+cu} Parameters ---------- uarg : array Grid param : ARGparams instance Model parameters Returns ------- array Same dimension as uarg """ # return param.rho * uarg / (1 + param.scale * uarg) rho = param.rho scale = param.get_scale() return ne.evaluate("rho * uarg / (1 + scale * uarg)") def bfun(self, uarg, param): r"""Function b(). .. math:: b\left(u\right)=\delta\log\left(1+cu\right) Parameters ---------- uarg : array Grid param : ARGparams instance Model parameters Returns ------- array Same dimension as uarg """ # return param.delta * np.log(1 + param.scale * uarg) scale = param.get_scale() delta = param.delta return ne.evaluate("delta * log(1 + scale * uarg)") def afun_q(self, uarg, param): r"""Risk-neutral function a(). Parameters ---------- uarg : array Grid param : ARGparams instance Model parameters Returns ------- array Same dimension as uarg """ return self.afun(uarg, self.convert_to_q(param)) def bfun_q(self, uarg, param): r"""Risk-neutral function b(). Parameters ---------- uarg : array Grid param : ARGparams instance Model parameters Returns ------- array Same dimension as uarg """ return self.bfun(uarg, self.convert_to_q(param)) def dafun(self, uarg, param): r"""Derivative of function a() with respect to scale, rho, and delta. .. math:: \frac{\partial a}{\partial c}\left(u\right) &=-\frac{\rho u^2}{\left(1+cu\right)^2} \\ \frac{\partial a}{\partial \rho}a\left(u\right) &=\frac{u}{1+cu} \\ \frac{\partial a}{\partial \delta}a\left(u\right) &=0 Parameters ---------- uarg : (nu, ) array Grid param : ARGparams instance Model parameters Returns ------- (3, nu) array """ da_scale = -param.rho * uarg**2 / (param.get_scale()*uarg + 1)**2 da_rho = uarg / (param.get_scale()*uarg + 1) da_delta = np.zeros_like(uarg) return np.vstack((da_scale, da_rho, da_delta)) def dbfun(self, uarg, param): r"""Derivative of function b() with respect to scale, rho, and delta. .. math:: \frac{\partial b}{\partial c}\left(u\right) &=\frac{\delta u}{1+cu} \\ \frac{\partial b}{\partial \rho}\left(u\right) &=0 \\ \frac{\partial b}{\partial \delta}\left(u\right) &=\log\left(1+cu\right) Parameters ---------- uarg : (nu, ) array Grid param : ARGparams instance Model parameters Returns ------- (3, nu) array """ db_scale = param.delta * uarg / (1 + param.get_scale() * uarg) db_rho = np.zeros_like(uarg) db_delta = np.log(1 + param.get_scale() * uarg) return np.vstack((db_scale, db_rho, db_delta)) def cfun(self, uarg, param): r"""Function c(). .. math:: c\left(u\right)=\delta\log\left\{1+\frac{cu}{1-\rho}\right\} Parameters ---------- uarg : array Grid param : ARGparams instance Model parameters Returns ------- array Same dimension as uarg """ return param.delta * np.log(1 + param.get_scale()*uarg / (1-param.rho)) def center(self, param): """No-arb restriction parameter. Parameters ---------- param : ARGparams instance Model parameters Returns ------- float Same dimension as uarg """ return param.phi / (param.get_scale() * (1 + param.rho))**.5 def psi(self, param): """Function psi. Parameters ---------- param : ARGparams instance Model parameters Returns ------- float """ return (param.price_ret-.5) * (1-param.phi**2) + self.center(param) def alpha(self, uarg, param): """Function alpha(). Parameters ---------- uarg : array Grid param : ARGparams instance Model parameters Returns ------- array Same dimension as uarg """ return self.psi(param) * uarg - .5 * uarg**2 * (1 - param.phi**2) def beta(self, uarg, param): """Function beta(). Same for risk-neutral. Parameters ---------- uarg : array Grid param : ARGparams instance Model parameters Returns ------- array Same dimension as uarg """ return uarg * self.afun_q(- self.center(param), param) def gamma(self, uarg, param): """Function gamma(). Same for risk-neutral. Parameters ---------- uarg : array Grid param : ARGparams instance Model parameters Returns ------- array Same dimension as uarg """ return uarg * self.bfun_q(- self.center(param), param) def lgfun(self, uarg, varg, param): """Function l(u, v) and g(u, v) in joint characteristic function. Parameters ---------- uarg : array Grid for volatility varg : array Grid for returns param : ARGparams instance Model parameters Returns ------- lfun : array gfun : array """ alpha = self.alpha(varg, param) lfun = self.afun(uarg + alpha, param) + self.beta(varg, param) gfun = self.bfun(uarg + alpha, param) + self.gamma(varg, param) return lfun, gfun def lgfun_q(self, uarg, varg, param): """Function l(u, v) and g(u, v) in joint risk-neutral characteristic function. Parameters ---------- uarg : array Grid for volatility varg : array Grid for returns param : ARGparams instance Model parameters Returns ------- lfun : array gfun : array """ lfun1, gfun1 = self.lgfun(uarg + param.price_vol, varg + param.price_ret, param) lfun2, gfun2 = self.lgfun(param.price_vol, param.price_ret, param) lfun = lfun1 - lfun2 gfun = gfun1 - gfun2 return lfun, gfun def ch_fun_elements(self, varg, param): """Functions psi(v, n) and ups(v, n) in risk-neutral characteristic function of returns for n periods. Parameters ---------- varg : array Grid for returns param : ARGparams instance Model parameters Returns ------- psi : array ups : array """ periods = days_from_maturity(self.maturity) ones = np.ones_like(periods) lfun, gfun = self.lgfun_q(0., varg, param) varg, psi, ups = varg * ones, lfun * ones, gfun * ones while True: if np.array_equal(periods, ones): return psi, ups cond = periods > 1 periods[cond] -= 1 lfun, gfun = self.lgfun_q(psi[:, cond], varg[:, cond], param) ups[:, cond] += gfun psi[:, cond] = lfun def store_ch_fun_elements(self, varg, param): """Functions psi(v, n) and ups(v, n) in risk-neutral characteristic function of returns for n periods. Parameters ---------- varg : array Grid for returns param : ARGparams instance Model parameters Returns ------- psi : array ups : array """ periods = np.max(days_from_maturity(self.maturity)) psi, ups = self.lgfun_q(0., varg, param) psidict, upsdict = {1: psi}, {1: ups} while True: if periods == 1: return psidict, upsdict periods -= 1 lfun, gfun = self.lgfun_q(psi, varg, param) ups += gfun psi = lfun psidict[periods], upsdict[periods] = psi, ups def char_fun_ret_q(self, varg, param): r"""Conditional risk-neutral Characteristic function (return). Parameters ---------- varg : array_like Grid for returns. Real values only. param : ARGparams instance Model parameters Returns ------- array_like Characteristic function for each observation and each grid point Notes ----- Conditional on :math:`\sigma_t` only All market data (vol, maturity, riskfree) can be vectors of the same size, and varg can be a vector of another size, but of transposed shape, i.e. vol = np.ones(5), and varg = np.ones((10, 1)) """ if self.vol is None: raise ValueError('Volatility is not loaded!') if self.maturity is None: raise ValueError('Maturity is not loaded!') if self.riskfree is None: raise ValueError('Risk-free rate is not loaded!') if np.iscomplex(varg).any(): raise ValueError('Argument must be real!') psi, ups = self.ch_fun_elements(-1j * varg, param) # discount = np.exp(- 1j * varg * self.riskfree * self.maturity) return np.exp(- self.vol * psi - ups) def char_fun_vol(self, uarg, param): """Conditional Characteristic function (volatility). Parameters ---------- uarg : array Grid. If real, then returns Laplace transform. If complex, then returns characteristi function. param : ARGparams instance Model parameters Returns ------- (nobs-1, nu) array Characteristic function for each observation and each grid point """ return np.exp(- self.vol[:-1, np.newaxis] * self.afun(uarg, param) - np.ones((self.vol[1:].shape[0], 1)) * self.bfun(uarg, param)) def char_fun_ret(self, uarg, param): r"""Conditional Characteristic function (return). Parameters ---------- uarg : array Grid. If real, then returns Laplace transform. If complex, then returns characteristi function. param : ARGparams instance Model parameters Returns ------- (nobs-1, nu) array Characteristic function for each observation and each grid point Notes ----- Conditional on current :math:`\sigma_{t+1}` and past :math:`\sigma_t` """ return np.exp(-self.vol[1:, np.newaxis] * self.alpha(uarg, param) - self.vol[:-1, np.newaxis] * self.beta(uarg, param) -
np.ones((self.vol[1:].shape[0], 1))
numpy.ones
import os, sys, time import numpy as np import matplotlib.pyplot as plt import matplotlib.gridspec as gridspec from matplotlib.colorbar import Colorbar import matplotlib.colors as mcolors from matplotlib.patches import Ellipse from astropy.io import fits from astropy.visualization import (AsinhStretch, LinearStretch, ImageNormalize) from frank.radial_fitters import FrankFitter from frank.geometry import FixedGeometry from frank.io import save_fit # controls target = 'dx5_incl2' #target = 'dx5_PA5' #target = 'incl2_PA5' #target = 'incl2_PA5_dx5' #target = 'zr3_dx5' #target = 'zr3_dy5' #target = 'zr3_incl2' #target = 'zr3_PA5' frank = True im_dat = False im_res = True im_mdl = False annotate_res = False # constants c_ = 2.99792e10 k_ = 1.38057e-16 # residuals color map c2 = plt.cm.Reds(np.linspace(0, 1, 32)) c1 = plt.cm.Blues_r(np.linspace(0, 1, 32)) c1 = np.vstack([c1, np.ones((12, 4))]) colors = np.vstack((c1, c2)) mymap = mcolors.LinearSegmentedColormap.from_list('eddymap', colors) # crude passing mechanism f = open('whichdisk.txt', 'w') f.write(target) f.close() ### - IMAGE THE DATA if im_dat: print('....') print('Imaging the data') print('....') os.system('casa --nogui --nologger --nologfile -c data_imaging.py') print('....') print('Finished imaging the data') print('....') ### - PLOT THE ANNOTATED IMAGE # load data dhdu = fits.open('data/dx1mas_data.JvMcorr.fits') dimg, hd = np.squeeze(dhdu[0].data), dhdu[0].header # parse coordinate frame indices into physical numbers RA = 3600 * hd['CDELT1'] * (np.arange(hd['NAXIS1']) - (hd['CRPIX1'] - 1)) DEC = 3600 * hd['CDELT2'] * (np.arange(hd['NAXIS2']) - (hd['CRPIX2'] - 1)) dRA, dDEC =
np.meshgrid(RA, DEC)
numpy.meshgrid
import nnvm import numpy as np import tvm import topi.testing from tvm.contrib import graph_runtime from nnvm import symbol as sym from nnvm.compiler import graph_util, graph_attr from nnvm.testing import ctx_list, utils def test_ewise_injective(): x = sym.Variable("x") y = x * 2 y = sym.flatten(y) + 1 dshape = (10, 2, 3) shape_dict = {"x": dshape} dtype = "float32" target = "llvm" for target, ctx in ctx_list(): graph, lib, _ = nnvm.compiler.build(y, target, shape_dict) assert graph.index.num_nodes == 2 m = graph_runtime.create(graph, lib, ctx) x_np = np.random.uniform(size=dshape).astype(dtype) m.run(x=x_np) out = m.get_output(0, tvm.nd.empty((10, 6))) tvm.testing.assert_allclose( out.asnumpy(), x_np.reshape(out.shape) * 2 + 1, atol=1e-5, rtol=1e-5) def test_conv_ewise_injective(): x = sym.Variable("x") y = sym.conv2d(x, channels=32, kernel_size=(3, 3), groups=32, name="y", padding=(1,1)) y = sym.flatten(y + 1) + 1 dtype = "float32" dshape = (1, 32, 18, 18) kshape = (32, 1, 3, 3) oshape = (1, 32* 18 * 18) shape_dict = {"x": dshape} for target, ctx in ctx_list(): graph, lib, _ = nnvm.compiler.build(y, target, shape_dict) m = graph_runtime.create(graph, lib, ctx) # print(graph.ir(join_entry_attrs=["shape"])) assert graph.index.num_nodes == 5 # set input data = tvm.nd.array(np.random.uniform(size=dshape).astype(dtype)) kernel = tvm.nd.array(np.random.uniform(size=kshape).astype(dtype)) bias = tvm.nd.array(np.random.uniform(size=kshape[0]).astype(dtype)) m.run(x=data, y_weight=kernel, y_bias=bias) # get output out = m.get_output(0, tvm.nd.empty(oshape, dtype)) c_np = topi.testing.depthwise_conv2d_python_nchw( data.asnumpy(), kernel.asnumpy(), (1,1), 'SAME') c_np = c_np + bias.asnumpy().reshape(kshape[0], 1, 1) + 1 c_np = c_np.reshape(c_np.shape[0], np.prod(c_np.shape[1:])) + 1 tvm.testing.assert_allclose(out.asnumpy(), c_np, rtol=1e-5) def test_injective_reduce_injective(): x = sym.Variable("x") x = sym.flatten(x) + 1 y = sym.sum(x, axis=1) dtype = "float32" dshape = (32, 1, 18, 18) shape_dict = {"x": dshape} for target, ctx in ctx_list(): graph, lib, _ = nnvm.compiler.build(y, target, shape_dict) m = graph_runtime.create(graph, lib, ctx) assert graph.index.num_nodes == 2 data = np.random.uniform(size=dshape).astype(dtype) m.run(x=data) c_np = np.sum(data.reshape(32, 18 * 18) + 1, axis=1) # get output out = m.get_output(0, tvm.nd.empty(c_np.shape, dtype)) tvm.testing.assert_allclose(out.asnumpy(), c_np, rtol=1e-5) def test_injective_conv2d(): channels = 16 data = sym.Variable(name="data") pool = sym.global_avg_pool2d(data=data) weight = sym.reshape(pool, shape=[1, channels, 1, 1]) residual = sym.conv2d(data=data, kernel_size=(3,3), channels=channels, padding=(1, 1), layout="NCHW", kernel_layout="OIHW", use_bias=False, name="conv") net = weight * data + residual size = 56 dtype="float32" dshape = (1, channels, size, size) kshape = (channels, channels, 3, 3) oshape = dshape shape_dict = {"data": dshape} for target, ctx in ctx_list(): graph, lib, _ = nnvm.compiler.build(net, target, shape_dict) # data, global_avg_pool, conv weight, conv op, fused elemwise add assert graph.index.num_nodes == 5 data = tvm.nd.array(np.random.uniform(size=dshape).astype(dtype)) kernel = tvm.nd.array(np.random.uniform(size=kshape).astype(dtype)) m = graph_runtime.create(graph, lib, ctx) m.run(data=data, conv_weight=kernel) # get output out = m.get_output(0, tvm.nd.empty(oshape, dtype)) residual = topi.testing.conv2d_nchw_python( data.asnumpy(), kernel.asnumpy(), (1,1), 'SAME') weight = np.mean(data.asnumpy(), axis=(2, 3)) c_np = weight[:, :, np.newaxis, np.newaxis] * data.asnumpy() + residual tvm.testing.assert_allclose(out.asnumpy(), c_np, rtol=1e-5) def test_concatenate_conv2d(): ch = 3 size = 8 data = sym.Variable(name="data") concat = sym.concatenate(data, data, axis=1) conv = sym.conv2d(data=concat, kernel_size=(1,1), channels=ch*2, use_bias=False, name="conv") net = sym.elemwise_add(concat, conv) dtype="float32" dshape = (1, ch, size, size) kshape = (ch*2, ch*2, 1, 1) oshape = (1, ch*2, size, size) shape_dict = {"data": dshape} for target, ctx in ctx_list(): graph, lib, _ = nnvm.compiler.build(net, target, shape_dict) # data, conv weight, conv op, concat assert graph.index.num_nodes == 4 data = tvm.nd.array(np.random.uniform(size=dshape).astype(dtype)) kernel = tvm.nd.array(np.random.uniform(size=kshape).astype(dtype)) m = graph_runtime.create(graph, lib, ctx) m.run(data=data, conv_weight=kernel) # get output out = m.get_output(0, tvm.nd.empty(oshape, dtype)) concat = np.concatenate((data.asnumpy(), data.asnumpy()), axis=1) conv = topi.testing.conv2d_nchw_python( concat, kernel.asnumpy(), (1,1), 'SAME') ref = concat + conv tvm.testing.assert_allclose(out.asnumpy(), ref, rtol=1e-5) def test_residual_block_layout_transform(): ch = 16 size = 32 data = sym.Variable(name="data") conv1 = sym.conv2d(data=data, kernel_size=(3,3), channels=ch, padding = (1, 1), use_bias=False, name="conv1") layout_transform1 = sym.__layout_transform__(data=conv1, src_layout="NCHW", dst_layout="NCHW8c") layout_transform2 = sym.__layout_transform__(data=layout_transform1, src_layout="NCHW8c", dst_layout="NCHW") conv2 = sym.conv2d(data=conv1, kernel_size=(3,3), channels=ch, padding = (1, 1), use_bias=False, name="conv2") elemwise_sum = sym.elemwise_add(layout_transform2, conv2) out = sym.relu(elemwise_sum) dtype="float32" dshape = (1, ch, size, size) kshape = (ch, ch, 3, 3) oshape = (1, ch, size, size) shape_dict = {"data": dshape} target = "llvm" # only test on llvm since it involves NCHW8c layout ctx = tvm.context(target, 0) graph, lib, _ = nnvm.compiler.build(out, target, shape_dict) # data, conv1 weight, conv1, layout transform + elemwise add + relu, conv2 weight, conv2 op assert graph.index.num_nodes == 6 data = tvm.nd.array(np.random.uniform(size=dshape).astype(dtype)) kernel1 = tvm.nd.array(np.random.uniform(size=kshape).astype(dtype)) kernel2 = tvm.nd.array(np.random.uniform(size=kshape).astype(dtype)) m = graph_runtime.create(graph, lib, ctx) m.run(data=data, conv1_weight=kernel1, conv2_weight=kernel2) out = m.get_output(0, tvm.nd.empty(oshape, dtype)) conv1 = topi.testing.conv2d_nchw_python( data.asnumpy(), kernel1.asnumpy(), (1,1), 'SAME') conv2 = topi.testing.conv2d_nchw_python( conv1, kernel2.asnumpy(), (1,1), 'SAME') ref = np.maximum(conv1 + conv2, 0) tvm.testing.assert_allclose(out.asnumpy(), ref, rtol=1e-5) def build_and_run(sym, params, data, out_shape, target, ctx, opt_level=2): with nnvm.compiler.build_config(opt_level=opt_level): graph, lib, params = nnvm.compiler.build(sym, target, shape={"data":data.shape}, params=params) module = graph_runtime.create(graph, lib, ctx) module.set_input(**params) module.set_input("data", data) module.run() out = module.get_output(0, tvm.nd.empty(out_shape)) return out.asnumpy(), graph def test_fuse_conv2d_elu(): def elu(data): return -0.5 * sym.relu(1 - sym.exp(data)) + sym.relu(data) def get_sym(out_channel): data = sym.Variable(name="data") data = sym.conv2d(data=data, kernel_size=(3,3), channels=out_channel, padding=(1, 1), layout="NCHW", kernel_layout="OIHW", use_bias=True) data = sym.batch_norm(data) data = elu(data) return data in_channel = 8 out_channel = 16 size = 64 dshape = (1, in_channel, size, size) oshape = (1, out_channel, size, size) data =
np.random.uniform(-1, 1, dshape)
numpy.random.uniform
"""Unit tests for classifier.py.""" import pytest import numpy as np import xarray as xr from entrogrammer import classifier xr_data = xr.DataArray(np.zeros((2, 2)), dims=("x", "y")) np_data = np.zeros((2, 2)) def test_xarray_classifier(): """Test that xarray data type can be handled.""" C = classifier.BinaryClassifier(xr_data, 1) assert isinstance(C, classifier.BaseClassifier) is True assert type(C) == classifier.BinaryClassifier assert np.all(C.data == np.zeros((2, 2))) def test_numpy_classifier(): """Test that numpy data type can be handled.""" C = classifier.BinaryClassifier(np_data, 1) assert isinstance(C, classifier.BaseClassifier) is True assert type(C) == classifier.BinaryClassifier assert np.all(C.data == np.zeros((2, 2))) def test_typeerror_classifier(): """Test that a type error will be raised.""" with pytest.raises(TypeError): classifier.BinaryClassifier('invalid', 1) def test_binary_neg_threshold(): """Test binary classifier with a negative threshold.""" vals = np.zeros((2, 2)) vals[0, :] = -5 vals[1, :] = -10 # create classifier C = classifier.BinaryClassifier(vals, -7.5) assert np.all(C.data[0, :] == -5) assert np.all(C.data[1, :] == -10) assert np.all(C.classified[0, :] == 1) assert np.all(C.classified[1, :] == 0) # check threshold value assert C.threshold == -7.5 # re-classify then check values C.classify(0) assert np.all(C.data[0, :] == -5) assert np.all(C.data[1, :] == -10) assert np.all(C.classified[0, :] == 0) assert np.all(C.classified[1, :] == 0) def test_binary_pos_threshold(): """Test binary classifier with a positive threshold.""" vals = np.zeros((2, 2)) vals[0, :] = 5 vals[1, :] = 10 # create classifier C = classifier.BinaryClassifier(vals, 7) assert np.all(C.data[0, :] == 5) assert np.all(C.data[1, :] == 10) assert np.all(C.classified[0, :] == 0) assert np.all(C.classified[1, :] == 1) def test_binary_invalid_threshold(): """Test binary classifier with invalid threshold.""" with pytest.raises(TypeError): classifier.BinaryClassifier(np_data, 'invalid') def test_override_threshold(): """Test overriding threshold in classify().""" vals = np.zeros((2, 2)) vals[0, :] = 5 vals[1, :] = 10 # create classifier and assert threshold C = classifier.BinaryClassifier(vals, 7) assert C.threshold == 7 assert np.all(C.data[0, :] == 5) assert np.all(C.data[1, :] == 10) # classify with different value then check values C.classify(1) assert C.threshold == 1 assert np.all(C.data[0, :] == 5) assert np.all(C.data[1, :] == 10) assert np.all(C.classified[0, :] == 1) assert np.all(C.classified[1, :] == 1) # check for jenkspy - skips test if jenkspy is not present _skip_jenks = 0 try: from jenkspy import JenksNaturalBreaks except Exception: _skip_jenks = 1 @pytest.mark.skipif(_skip_jenks == 1, reason="jenkspy not available") def test_jenks_int(): """Test JenksClassifier with integer.""" vals = np.zeros((5,)) vals[3:] = 1 # classify w/ Jenks C = classifier.JenksClassifier(vals, 3) # make assertion assert len(
np.unique(C.classified)
numpy.unique
import sys sys.path.insert(0, '../') from forest3D import lidar_IO,ground_removal,treeDetector,inventory_tools,utilities,detection_tools,stemSegmenter import os import json import numpy as np output_dir = '/home/lloyd/Documents/projects/forest_3d_app/outputs' print("reading the data into python...") #path = '/home/lloyd/Documents/datasets/lidar/forestry_usyd/extracts/plots_for_training/V1_Scanner1_161011_220153_crop026.asc' #xyz_data = lidar_IO.XYZreadFromCSV(path,delimiter=' ',x=0,y=1,z=2, returns=8) path = '/home/lloyd/Documents/datasets/lidar/forestry_usyd/V1_Scanner1_161011_220153_crop001.las' xyz_data = lidar_IO.readFromLas(path, fields = ['x','y','z','Intensity']) MAX_RETURN_INTENSITY = 50000 xyz_data[:, 3] /= MAX_RETURN_INTENSITY print("removing the ground...") offset = [0,0,0] # optional: use to make calculations stable on large values xyz_data_gr_2m,intensity_gr_2m = ground_removal.removeGround(xyz_data[:,:3],offset,returns=xyz_data[:,3],thresh=2.0,proc_path=output_dir) xyz_data_gr_1m,intensity_gr_1m = ground_removal.removeGround(xyz_data[:,:3],offset,returns=xyz_data[:,3],thresh=1.0) ground_pts = ground_removal.load_ground_surface(os.path.join(output_dir,'_ground_surface.ply')) print("detecting trees...") detector_addr = '/home/lloyd/Documents/projects/forest_3d_app/models/detection/tumut1' with open(os.path.join(detector_addr, 'raster_config.json')) as json_file: config_dict = json.load(json_file) rasterTreeDetector = treeDetector.RasterDetector(**config_dict ) boxes = rasterTreeDetector.sliding_window(detector_addr,xyz_data_gr_2m,ground_pts=ground_pts,windowSize = [100,100], stepSize = 80,returnBoxes=True) labels = detection_tools.label_pcd_from_bbox(xyz_data_gr_1m, boxes, yxyx=True) print("convert each tree to a separate array within a list...") xyzr_list = [] for i in list(
np.unique(labels)
numpy.unique
#!/usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2021 IBM Corporation # # Permission is hereby granted, free of charge, to any person obtaining a copy # of this software and associated documentation files (the "Software"), to deal # in the Software without restriction, including without limitation the rights # to use, copy, modify, merge, publish, distribute, sublicense, and/or sell # copies of the Software, and to permit persons to whom the Software is # furnished to do so, subject to the following conditions: # # The above copyright notice and this permission notice shall be included in all # copies or substantial portions of the Software. # # THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR # IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, # FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE # AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER # LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE # SOFTWARE. import os import json import argparse import ast import math from enum import Enum import numpy as np import threading import rospy import roslaunch import tf2_ros import tf_conversions from std_msgs.msg import String, Int64 from geometry_msgs.msg import TransformStamped, Vector3, Quaternion, Point, Pose from geometry_msgs.msg import PoseStamped, PoseWithCovarianceStamped from sensor_msgs.msg import Imu, PointCloud2, LaserScan, NavSatFix from nav_msgs.msg import Odometry from tf2_geometry_msgs import PoseStamped # necessary to use tfBuffer.transform(pose_stamped_msg, frame_id) from tf2_geometry_msgs import PointStamped, Vector3Stamped from cartographer_ros_msgs.msg import * from cartographer_ros_msgs.srv import * import geoutil import resource_utils from wireless_utils import extract_samples from wireless_rss_localizer import SimpleRSSLocalizer from mf_localization_msgs.msg import * from mf_localization_msgs.srv import * def json2anchor(jobj): return geoutil.Anchor(lat = jobj["lat"], lng = jobj["lng"], rotate = jobj["rotate"], ) class LocalizationMode(Enum): INIT = "init" TRACK = "track" def __str__(self): return self.value def convert_samples_coordinate(samples, from_anchor, to_anchor, floor): samples2 = [] for s in samples: s2 = s.copy() info = s["information"] xy = geoutil.Point(x=info["x"], y= info["y"]) latlng = geoutil.local2global(xy, from_anchor) local_coord = geoutil.global2local(latlng, to_anchor) s2["information"]["x"] = local_coord.x s2["information"]["y"] = local_coord.y s2["information"]["floor"] = floor samples2.append(s2) return samples2 class FloorManager: def __init__(self): self.node_id = None self.frame_id = None self.localizer = None self.map_filename = "" # publisher self.initialpose_pub = None self.imu_pub = None self.points_pub = None # services self.get_trajectory_states = None self.finish_trajectory = None self.start_trajectory = None class MultiFloorManager: def __init__(self): # state variables self.is_active = True self.floor = None # state self.area = None # state self.current_frame = None # state self.mode = None # state self.valid_imu = False # state for input validation self.valid_points2 = False # state for input validation # for optimization detection self.map2odom = None # state self.optimization_detected = False # state self.odom_displacement = 0 # used for print # for loginfo self.spin_count = 0 self.prev_spin_count = None self.ble_localizer_dict = {} self.ble_floor_localizer = None # area identification self.area_floor_const = 10000 self.area_localizer = None self.seq_initialpose = 0 self.transforms = [] # average floor values self.floor_queue_size = 10 self.floor_queue = [] # state self.floor_list = [] # store known floor values # failure detection self.rmse_threshold = 5.0 self.loc_queue_min_size = 5 self.loc_queue_max_size = 10 self.loc_queue = [] self.loc_beacon_queue = [] # auto-relocalization self.auto_relocalization = False # frames self.global_map_frame = "map" self.local_map_frame = "map" self.odom_frame = "odom" self.published_frame = "base_link" self.base_link_frame = "base_link" self.global_position_frame = "base_link" # frame_id to compute global position # publisher self.current_floor_pub = rospy.Publisher("current_floor", Int64, latch=True, queue_size=10) self.current_frame_pub = rospy.Publisher("current_frame", String, latch=True, queue_size=10) self.current_map_filename_pub = rospy.Publisher("current_map_filename", String, latch=True, queue_size=10) self.scan_matched_points2_pub = None self.resetpose_pub = rospy.Publisher("resetpose", PoseWithCovarianceStamped, queue_size=10) self.global_position_pub = rospy.Publisher("global_position", MFGlobalPosition, queue_size=10) # Subscriber self.scan_matched_points2_sub = None # verbosity self.verbose = False # input data validation self.norm_q_tolerance = 0.1 # to block [0,0,0,0] quaternion self.norm_acc_threshold = 0.1 # to block [0,0,0] linear_acceleration # for local_map_tf_timer_callback self.local_map_tf = None def imu_callback(self, msg): # validate imu message acc = msg.linear_acceleration q = msg.orientation acc_vec = np.array([acc.x, acc.y, acc.z]) q_vec = np.array([q.x, q.y, q.z, q.w]) norm_acc =
np.linalg.norm(acc_vec)
numpy.linalg.norm
import cv2 import os import sys import numpy as np import pandas as pd from glob import glob import itertools from visionfuncs.io import sorted_glob from visionfuncs import cbcalib from visionfuncs import geometry from epypes.compgraph import CompGraphRunner from .io import open_images_all from .graph import CGCalibrateStereoBase def prepare_points_for_all_images(runner_prepare, imfiles_1, imfiles_2): all_images_1 = open_images_all(imfiles_1) all_images_2 = open_images_all(imfiles_2) runner_prepare.run( calibration_images_1=all_images_1, calibration_images_2=all_images_2 ) def create_runner_calib(im_wh): cg_calib = CGCalibrateStereoBase() params_calib = {'im_wh': im_wh} return CompGraphRunner(cg_calib, params_calib) def run_calib(impoints_1, impoints_2, indices_subset, pattern_points, im_wh): runner_calib = create_runner_calib(im_wh) imp_1 = [impoints_1[idx] for idx in indices_subset] imp_2 = [impoints_2[idx] for idx in indices_subset] obp = cbcalib.make_list_of_identical_pattern_points(len(indices_subset), pattern_points) runner_calib.run( image_points_1=imp_1, image_points_2=imp_2, object_points=obp ) return runner_calib def all_images_reprojection_error_for_subsets(calib_runners, runner_prepare): """ For each indices subset generated by indices_subset_gen, perform stereo calibration. Then, given the resulting intrinsics, solve PnP problem and compute reprojection error for all images. Return two NumPy arrays of equal length, where each element corresponds to reprojection error given all images and intrinsics from calibration based on a specific images subset. """ rms_list_1 = [] rms_list_2 = [] # for all images impoints_1 = runner_prepare['image_points_1'] impoints_2 = runner_prepare['image_points_2'] pattern_points = runner_prepare['pattern_points'] def multiple_pnp(impoints, cm, dc): # capturing object_points rvecs = [] tvecs = [] for imp in impoints: _, rvec, tvec = cv2.solvePnP(pattern_points, imp, cm, dc) rvecs.append(rvec) tvecs.append(tvec) return rvecs, tvecs object_points = cbcalib.make_list_of_identical_pattern_points(len(impoints_1), pattern_points) for rcalib in calib_runners: cm1 = rcalib['cm_1'] dc1 = rcalib['dc_1'] cm2 = rcalib['cm_2'] dc2 = rcalib['dc_2'] rvecs1, tvecs1 = multiple_pnp(impoints_1, cm1, dc1) rvecs2, tvecs2 = multiple_pnp(impoints_2, cm2, dc2) rms1 = cbcalib.reproject_and_measure_error(impoints_1, object_points, rvecs1, tvecs1, cm1, dc1) rms2 = cbcalib.reproject_and_measure_error(impoints_2, object_points, rvecs2, tvecs2, cm2, dc2) rms_list_1.append(rms1) rms_list_2.append(rms2) return np.array(rms_list_1), np.array(rms_list_2) def run_calib_for_subsets(subsets, runner_prepare, im_wh): impoints_1 = runner_prepare['image_points_1'] impoints_2 = runner_prepare['image_points_2'] pattern_points = runner_prepare['pattern_points'] pattern_size = runner_prepare['pattern_size_wh'] runners = [] for indices in subsets: runner_calib = run_calib(impoints_1, impoints_2, indices, pattern_points, im_wh) runners.append(runner_calib) return runners def all_images_triangulate_for_subsets(calib_runners, runner_prepare): res = [] ip_1 = runner_prepare['image_points_1'] ip_2 = runner_prepare['image_points_2'] for rcalib in calib_runners: cm1 = rcalib['cm_1'] dc1 = rcalib['dc_1'] cm2 = rcalib['cm_2'] dc2 = rcalib['dc_2'] points_3d_all_images = cbcalib.triangulate_impoints( rcalib['P1'], rcalib['P2'], ip_1, ip_2 ) psize = runner_prepare['pattern_size_wh'] measure = lambda p3d: measure_cb_distances_in_rows(p3d, psize) distances_all = [measure(p3d).mean() for p3d in points_3d_all_images] res.append(distances_all) # rows -- calibration runs # cols -- images return np.array(res) def triangulate_all(calib_runners, runner_prepare): res = [] ip_1 = runner_prepare['image_points_1'] ip_2 = runner_prepare['image_points_2'] for rcalib in calib_runners: cm1 = rcalib['cm_1'] dc1 = rcalib['dc_1'] cm2 = rcalib['cm_2'] dc2 = rcalib['dc_2'] P1 = rcalib['P1'] P2 = rcalib['P2'] R1 = rcalib['R1'] R2 = rcalib['R2'] ip_1_ud = [cbcalib.undistort_points(src, cm1, dc1, P1, R1) for src in ip_1] ip_2_ud = [cbcalib.undistort_points(src, cm2, dc2, P2, R2) for src in ip_2] # triangulated point clouds for all images point_clouds = cbcalib.triangulate_impoints(P1, P2, ip_1_ud, ip_2_ud) res.append(point_clouds) return np.array(res) def pnp_for_each_image_pair(runner_prepare, cm1, dc1, cm2, dc2): op = runner_prepare['pattern_points'] n_images = len(runner_prepare['image_points_1']) rvecs_1 = [] tvecs_1 = [] rvecs_2 = [] tvecs_2 = [] for i in range(n_images): imp_1 = runner_prepare['image_points_1'][i] imp_2 = runner_prepare['image_points_2'][i] _, r1, t1 = cv2.solvePnP(op, imp_1, cm1, dc1) _, r2, t2 = cv2.solvePnP(op, imp_2, cm2, dc2) rvecs_1.append(r1.reshape(-1)) tvecs_1.append(t1.reshape(-1)) rvecs_2.append(r2.reshape(-1)) tvecs_2.append(t2.reshape(-1)) return np.array(rvecs_1), np.array(tvecs_1),
np.array(rvecs_2)
numpy.array
# -*- coding: utf-8 -*- """ Sections: - import libraries and define functions - loading all the data in a specific main folder into mainDataList - load data corresponding to a specific experiment (subfolder or video) into variables - load variables from postprocessed file corresponding to the specific experiment above - Voronoi analysis - plots for Voronoi analysis - drawing Voronoi diagrams and saving into movies """ import numpy as np import pandas as pd import matplotlib.pyplot as plt import time import cv2 as cv import scipy.io from scipy.io import loadmat from sklearn.metrics import mutual_info_score from scipy.spatial import distance as scipy_distance from scipy.spatial import Voronoi as ScipyVoronoi import progressbar import os import glob import shelve import scripts.functions_spinning_rafts as fsr rootFolderNameFromWindows = r'D:\\VideoProcessingFolder' # r'E:\Data_Camera_Basler_acA800-510uc_coilSystem' # rootFolderNameFromWindows = '/media/gardi/Seagate Backup Plus Drive/Data_Camera_Basler_acA800-510uc_coilSystem' # rootFolderNameFromWindows = '/media/gardi/Elements/Data_Camera_Basler-acA2500-60uc' # rootFolderNameFromWindows = '/media/gardi/Elements/Data_basler' # rootFolderNameFromWindows = r'E:\Data_Camera_Basler-acA2500-60uc' # rootFolderNameFromWindows = '/media/gardi/Elements/Data_Camera_Basler-acA2500-60uc/2018-10-09_o-D300-sym4-amp2-arcAngle30-Batch21Sep2018_Co500Au60_14mT_tiling_to be analyzed/processed' # rootFolderNameFromWindows = '/media/gardi/Elements/Data_Camera_Basler-acA2500-60uc/2018-10-09_o-D300-sym4-amp2-arcAngle30-Batch21Sep2018_Co500Au60_14mT_tiling_to be analyzed/processed/processed' # rootFolderNameFromWindows = '/media/gardi/Elements/Data_Camera_Basler-acA2500-60uc/2018-10-09_o-D300-sym4-amp2-arcAngle30-Batch21Sep2018_Co500Au60_14mT_tiling_to be analyzed' # rootFolderNameFromWindows = '/media/gardi/Elements/Data_basler' # rootFolderNameFromWindows = '/media/gardi/MPI-11/Data_basler' # rootFolderNameFromWindows = '/media/gardi/Elements/Data_PhantomMiroLab140' # rootFolderNameFromWindows = '/home/gardi/Rafts/Experiments Data/Data_PhantomMiroLab140' # rootFolderNameFromWindows = '/media/gardi/MPI-Data9/Data_Basler-ace2500-60uc_coilsystem' os.chdir(rootFolderNameFromWindows) rootFolderTreeGen = os.walk(rootFolderNameFromWindows) _, mainFolders, _ = next(rootFolderTreeGen) # %% loading all the data in a specific main folder into mainDataList # at the moment, it handles one main folder at a time. # for mainFolderID in np.arange(0,1): # os.chdir(mainFolders[mainFolderID]) mainFolderID = 4 os.chdir(mainFolders[mainFolderID]) dataFileList = glob.glob('*.dat') dataFileList.sort() dataFileListExcludingPostProcessed = dataFileList.copy() numberOfPostprocessedFiles = 0 mainDataList = [] variableListsForAllMainData = [] for dataID in range(len(dataFileList)): dataFileToLoad = dataFileList[dataID].partition('.dat')[0] if 'postprocessed' in dataFileToLoad: # the list length changes as items are deleted del dataFileListExcludingPostProcessed[dataID - numberOfPostprocessedFiles] numberOfPostprocessedFiles = numberOfPostprocessedFiles + 1 continue tempShelf = shelve.open(dataFileToLoad) variableListOfOneMainDataFile = list(tempShelf.keys()) expDict = {} for key in tempShelf: try: expDict[key] = tempShelf[key] except TypeError: pass tempShelf.close() mainDataList.append(expDict) variableListsForAllMainData.append(variableListOfOneMainDataFile) # # go one level up to the root folder # os.chdir('..') # %% load data corresponding to a specific experiment (subfolder or video) into variables dataID = 0 # explicitly load variables from data file date = mainDataList[dataID]['date'] batchNum = mainDataList[dataID]['batchNum'] spinSpeed = mainDataList[dataID]['spinSpeed'] numOfRafts = mainDataList[dataID]['numOfRafts'] numOfFrames = mainDataList[dataID]['numOfFrames'] raftRadii = mainDataList[dataID]['raftRadii'] raftLocations = mainDataList[dataID]['raftLocations'] raftOrbitingCenters = mainDataList[dataID]['raftOrbitingCenters'] raftOrbitingDistances = mainDataList[dataID]['raftOrbitingDistances'] raftOrbitingAngles = mainDataList[dataID]['raftOrbitingAngles'] raftOrbitingLayerIndices = mainDataList[dataID]['raftOrbitingLayerIndices'] magnification = mainDataList[dataID]['magnification'] commentsSub = mainDataList[dataID]['commentsSub'] currentFrameGray = mainDataList[dataID]['currentFrameGray'] raftEffused = mainDataList[dataID]['raftEffused'] subfolderName = mainDataList[dataID]['subfolders'][mainDataList[dataID]['expID']] variableListFromProcessedFile = list(mainDataList[dataID].keys()) # load the rest of variables if necessary. for key, value in mainDataList[dataID].items(): # loop through key-value pairs of python dictionary if not (key in globals()): globals()[key] = value outputDataFileName = date + '_' + str(numOfRafts) + 'Rafts_' + str(batchNum) + '_' + str(spinSpeed) + 'rps_' + str( magnification) + 'x_' + commentsSub # %% load all variables from postprocessed file corresponding to the specific experiment above analysisType = 5 # 1: cluster, 2: cluster+Voronoi, 3: MI, 4: cluster+Voronoi+MI, 5: velocity/MSD + cluster + Voronoi shelveDataFileName = date + '_' + str(numOfRafts) + 'Rafts_' + str(batchNum) + '_' + str(spinSpeed) + 'rps_' + str( magnification) + 'x_' + 'postprocessed' + str(analysisType) shelveDataFileExist = glob.glob(shelveDataFileName + '.dat') if shelveDataFileExist: print(shelveDataFileName + ' exists, load additional variables. ') tempShelf = shelve.open(shelveDataFileName) variableListFromPostProcessedFile = list(tempShelf.keys()) for key in tempShelf: # just loop through all the keys in the dictionary globals()[key] = tempShelf[key] tempShelf.close() print('loading complete.') elif len(shelveDataFileExist) == 0: print(shelveDataFileName + ' does not exist') # %% Voronoi analysis if os.path.isdir(subfolderName): os.chdir(subfolderName) else: print(subfolderName + ' subfolder' + ' does not exist in the current folder.') tiffFileList = glob.glob('*.tiff') tiffFileList.sort() dfNeighbors = pd.DataFrame(columns=['frameNum', 'raftID', 'localDensity', 'hexaticOrderParameter', 'pentaticOrderParameter', 'tetraticOrderParameter', 'neighborCount', 'neighborCountWeighted', 'neighborIDs', 'neighborDistances', 'neighborDistanceAvg', 'neighborDistanceWeightedAvg', 'ridgeIndices', 'ridgeVertexPairsOfOneRaft', 'ridgeLengths', 'ridgeLengthsScaled', 'ridgeLengthsScaledNormalizedBySum', 'ridgeLengthsScaledNormalizedByMax']) dfNeighborsAllFrames = pd.DataFrame(columns=['frameNum', 'raftID', 'localDensity', 'hexaticOrderParameter', 'pentaticOrderParameter', 'tetraticOrderParameter', 'neighborCount', 'neighborCountWeighted', 'neighborIDs', 'neighborDistances', 'neighborDistanceAvg', 'neighborDistanceWeightedAvg', 'ridgeIndices', 'ridgeVertexPairsOfOneRaft', 'ridgeLengths', 'ridgeLengthsScaled', 'ridgeLengthsScaledNormalizedBySum', 'ridgeLengthsScaledNormalizedByMax']) # code copied from cluster analysis for calculating raft pairwise distances raftPairwiseDistances = np.zeros((numOfRafts, numOfRafts, numOfFrames)) raftPairwiseEdgeEdgeDistancesSmallest = np.zeros((numOfRafts, numOfFrames)) raftPairwiseDistancesInRadius = np.zeros((numOfRafts, numOfRafts, numOfFrames)) radius = raftRadii.mean() # pixel check raftRadii.mean() for frameNum in np.arange(numOfFrames): raftPairwiseDistances[:, :, frameNum] = scipy_distance.cdist(raftLocations[:, frameNum, :], raftLocations[:, frameNum, :], 'euclidean') # smallest nonzero eedistances is assigned to one raft as the pairwise distance, raftPairwiseEdgeEdgeDistancesSmallest[:, frameNum] =
np.partition(raftPairwiseDistances[:, :, frameNum], 1, axis=1)
numpy.partition
# flake8: noqa from pkg_resources import resource_filename from functools import lru_cache import warnings import numpy as np from ...matlab_funcs import besselh, besselj, gammaln, lscov, quadl from ...sci_funcs import legendrePlm from ...core import stress2legendre def boundary(costheta, a=1, epsilon=.1, nu=0): """Projected boundary of a prolate spheroid Compute the boundary according to equation (4) in :cite:`Boyde2009` with the addition of the Poisson's ratio of the object. .. math:: B(\\theta) = a (1+\\epsilon) \\left[ (1+\\epsilon)^2 - \\epsilon (1+\\nu) (2+\\epsilon (1-\\nu)) \\cos^2 \\theta \\right]^{-1/2} This boundary function was derived for a prolate spheroid under the assumption that the semi-major axis :math:`a` and the semi-minor axes :math:`b=c` are defined as .. math:: a = b \\cdot \\frac{1+ \\epsilon}{1- \\nu \\epsilon} The boundary function :math:`B(\\theta)` can be derived with the above relation using the equation for a prolate spheroid. Parameters ---------- costheta: float or np.ndarray Cosine of polar coordinates :math:`\\theta` at which to compute the boundary. a: float Equatorial radii of prolate spheroid (semi-minor axis). epsilon: float Stretch ratio; defines size of semi-major axis: :math:`a = (1+\\epsilon) b`. Note that this is not the eccentricity of the prolate spheroid. nu: float Poisson's ratio :math:`\\nu` of the material. Returns ------- B: 1d ndarray Radial object boundary in dependence of theta :math:`B(\\theta)`. Notes ----- For :math:`\\nu=0`, the above equation becomes equation (4) in :cite:`Boyde2009`. """ x = costheta B = a * (1 + epsilon) \ / ((1 + epsilon)**2 - epsilon * (1 + nu) * (2 + epsilon * (1 - nu)) * x**2)**.5 return B @lru_cache(maxsize=32) def get_hgc(): """Load hypergeometric coefficients from *hypergeomdata2.dat*. These coefficients were computed by <NAME> using Wolfram Mathematica. """ hpath = resource_filename("ggf.stress.boyde2009", "hypergeomdata2.dat") hgc = np.loadtxt(hpath) return hgc def stress(object_index=1.41, medium_index=1.3465, poisson_ratio=0.45, semi_minor=2.8466e-6, stretch_ratio=0.1, wavelength=780e-9, beam_waist=3, power_left=.6, power_right=.6, dist=100e-6, n_points=100, theta_max=np.pi, field_approx="davis", ret_legendre_decomp=False, verbose=False): """Compute the stress acting on a prolate spheroid The prolate spheroid has semi-major axis :math:`a` and semi-minor axis :math:`b=c`. Parameters ---------- object_index: float Refractive index of the spheroid medium_index: float Refractive index of the surrounding medium poisson_ratio: float Poisson's ratio of the spheroid material semi_minor: float Semi-minor axis (inner) radius of the stretched object :math:`b=c`. stretch_ratio: float Measure of the deformation, defined as :math:`(a - b) / b` wavelength: float Wavelenth of the gaussian beam [m] beam_waist: float Beam waist radius of the gaussian beam [wavelengths] power_left: float Laser power of the left beam [W] power_right: float Laser power of the right beam [W] dist: float Distance between beam waist and object center [m] n_points: int Number of points to compute stresses for theta_max: float Maximum angle to compute stressed for field_approx: str TODO ret_legendre_decomp: bool If True, return coefficients of decomposition of stress into Legendre polynomials verbose: int Increase verbosity Returns ------- theta: 1d ndarray Angles for which stresses are computed sigma_rr: 1d ndarray Radial stress corresponding to angles coeff: 1d ndarray If `ret_legendre_decomp` is True, return compositions of decomposition of stress into Legendre polynomials. Notes ----- - The angles `theta` are computed on a grid that does not include zero and `theta_max`. - This implementation was first presented in :cite:`Boyde2009`. """ if field_approx not in ["davis", "barton"]: raise ValueError("`field_approx` must be 'davis' or 'barton'") object_index = complex(object_index) medium_index = complex(medium_index) W0 = beam_waist * wavelength epsilon = stretch_ratio nu = poisson_ratio # ZRL = 0.5*medium_index*2*np.pi/wavelength*W0**2 # Rayleigh range [m] # WZ = W0*(1+(beam_pos+d)**2/ZRL**2)**0.5 # beam waist at specified # position [m] K0 = 2 * np.pi / wavelength # wave vector [m] Alpha = semi_minor * K0 # size parameter C = 3e8 # speed of light [m/s] # maximum number of orders lmax = np.int(np.round(2 + Alpha + 4 * (Alpha)**(1 / 3) + 10)) if lmax > 120: msg = 'Required number of orders for accurate expansion exceeds allowed maximum!' \ + 'Reduce size of trapped particle!' raise ValueError(msg) if epsilon == 0: # spherical object, no point-matching needed (mmax = 0) mmax = 3 else: if (epsilon > 0.15): warnings.warn('Stretching ratio is high: {}'.format(epsilon)) # spheroidal object, point-matching required (mmax has to be divisible # by 3) mmax = 6 * lmax # permittivity in surrounding medium [1] EpsilonI = medium_index**2 EpsilonII = object_index**2 # permittivity in within cell [1] MuI = 1.000 # permeability in surrounding medium [1] MuII = 1.000 # permeability within cell [1] # wave constant in Maxwell's equations (surrounding medium) [1/m] K1I = 1j * K0 * EpsilonI # wave constant in Maxwell's equations (within cell) [1/m] K1II = 1j * K0 * EpsilonII # wave constant in Maxwell's equations (surrounding medium) [1/m] K2I = 1j * K0 # wave constant in Maxwell's equations (within cell) [1/m] K2II = 1j * K0 KI = (-K1I * K2I)**0.5 # wave vector (surrounding medium) [1/m] KII = (-K1II * K2II)**0.5 # wave vector (within cell) [1/m] # dimensionless parameters k0 = 1 # wave vector a = semi_minor * K0 # internal radius of stretched cell d = dist * K0 # distance from cell centre to optical stretcher # ap = a*(1+stretch_ratio) # semi-major axis (after stretching) # bp = a*(1-poisson_ratio*stretch_ratio) # semi-minor axis (after # stretching) w0 = W0 * K0 # Gaussian width # wave constant in Maxwell's equations (surrounding medium) k1I = K1I / K0 # wave constant in Maxwell's equations (within cell) k1II = K1II / K0 # wave constant in Maxwell's equations (surrounding medium) k2I = K2I / K0 # wave constant in Maxwell's equations (within cell) k2II = K2II / K0 kI = KI / K0 # wave vector (surrounding medium) kII = KII / K0 # wave vector (within cell) beta = kI # wave vector of Gaussian beam # other definitions # amplitude of electric field of left laser [kg m/(s**2 C)] EL = np.sqrt(power_left / (medium_index * C * W0**2)) # amplitude of electric field of right laser [kg m/(s**2 C)] ER = np.sqrt(power_right / (medium_index * C * W0**2)) HL = beta / k0 * EL # left laser amplitude of magnetic field HR = beta / k0 * ER # right laser amplitude of magnetic field zR = beta * w0**2 / 2 # definition of Rayleigh range S = (1 + 1j * d / zR)**(-1) # complex amplitude for Taylor expansion s = 1 / (beta * w0) # expansion parameter for Gaussian (Barton) # Functions # object boundary function: r(th) = a*B1(x) x= cos(th) def B1(x): return boundary(costheta=x, a=1, epsilon=epsilon, nu=nu) # Riccati Bessel functions and their derivatives # Riccati Bessel function (psi) def psi(l, z): return (np.pi / 2 * z)**(1 / 2) * besselj(l + 1 / 2, z) def psi1(l, z): return (np.pi / (2. * z))**(1 / 2) * \ (z * besselj(l - 1 / 2, z) - l * besselj(l + 1 / 2, z)) # first derivative (psi') def psi2(l, z): return (np.pi / 2)**(1 / 2) * (l + l**2 - z**2) * \ besselj(l + 1 / 2, z) * z**(-3 / 2) # second derivative (psi'') # First order Taylor expansion of psi is too inaccurate for larger values of k*a*Eps. # Hence, to match 1-st and higher order terms in Eps, subtract the 0-th order terms (no angular dependence) # from the exact function psi (including angular dependence) # Riccati Bessel function excluding angular dependence in 0-th order # (psiex) def psiex(l, z, x): return psi(l, z * B1(x)) - psi(l, z) def psi1ex(l, z, x): return psi1(l, z * B1(x)) - \ psi1(l, z) # first derivative of psiex def psi2ex(l, z, x): return psi2(l, z * B1(x)) - \ psi2(l, z) # second derivative of psi # defined for abbreviation def psixx(l, z, x): return psi(l, z * B1(x)) def psi1xx(l, z, x): return psi1(l, z * B1(x)) def psi2xx(l, z, x): return psi2(l, z * B1(x)) # Hankel function and its derivative def xi(l, z): return (np.pi / 2 * z)**(1 / 2) * besselh(l + 1 / 2, z) def xi1(l, z): return (np.pi / (2 * z))**(1 / 2) * \ ((l + 1) * besselh(l + 1 / 2, z) - z * besselh(l + 3 / 2, z)) def xi2(l, z): return (np.pi / 2)**(1 / 2) / \ z**(3 / 2) * (l + l**2 - z**2) * besselh(l + 1 / 2, z) # Comments: see above for psiex def xiex(l, z, x): return xi(l, z * B1(x)) - xi(l, z) def xi1ex(l, z, x): return xi1(l, z * B1(x)) - xi1(l, z) def xi2ex(l, z, x): return xi2(l, z * B1(x)) - xi2(l, z) def xixx(l, z, x): return xi(l, z * B1(x)) def xi1xx(l, z, x): return xi1(l, z * B1(x)) def xi2xx(l, z, x): return xi2(l, z * B1(x)) #% Associated Legendre functions P(m)_l(x) and their derivatives #% select mth component of vector 'legendre' [P**(m)_l(x)] # [zeros(m,1);1;zeros(l-m,1)].'*legendre(l,x) #% legendre polynomial [P**(m)_l(x)] def legendrePl(l, x): return legendrePlm(1, l, x) #% legendre polynomial [P**(1)_l(x)] def legendrePlm1(m, l, x): return ( (l - m + 1.) * legendrePlm(m, l + 1, x) - (l + 1.) * x * legendrePlm(m, l, x)) / (x**2 - 1) #% derivative d/dx[P**(m)_l(x)] def legendrePl1(l, x): return legendrePlm1(1, l, x) # defined to avoid division by zero (which can occur for x=1 in # legendrePl1... def legendrePlmex1(m, l, x): return -((l - m + 1) * legendrePlm(m, l + 1, x) - (l + 1) * x * legendrePlm(m, l, x)) def legendrePlex1(l, x): return legendrePlmex1(1, l, x) # Hypergeometric and Gamma functions hypergeomcoeff = get_hgc() ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## ## # Gaussian beam (incident fields) - in Cartesian basis (either Davis first order or Barton fifth order fields) # electric and magnetic fields according to Davis (first order) if field_approx == "davis": # left def eExiL(r, th, phi): return EL * (1 + 1j * (r * np.cos(th) + d) / zR)**(-1) * np.exp(-r**2 * np.sin(th)**2 / (w0**2 * (1 + 1j * (r * np.cos(th) + d) / zR))) * np.exp(1j * beta * (r *
np.cos(th)
numpy.cos
import tensorflow as tf import scipy.sparse as sp import numpy as np import GCN import utils class AFGSM: def __init__(self, A, X, Z, num_vicious_nodes, num_vicious_edges, dmin=1): """ :param A: sparse matrix, the adjacency matrix ,[n X n] :param X: sparse or dense matrix, the feature matrix ,[n x d], d is the dimension of features :param Z: sparse matrix, the labels, [n x c], c is the dimension of one-hot label :param num_vicious_nodes: int, the number of vicious nodes :param num_vicious_edges: int, the number of vicous edges :param dmin: int, min degree assigned for vicious nodes """ self.A = A.tocsr() self.A_orig = self.A.copy() self.A.setdiag(0) self.X = X self.Z = Z self.labels = list(np.squeeze(np.argmax(self.Z, axis=1))) self.num_vicious_nodes = num_vicious_nodes self.num_vicious_edges = num_vicious_edges self.An = utils.preprocess_graph(self.A) self.degree = np.squeeze(self.A.sum(axis=1).getA()) + 1 self.old_degree = np.squeeze(self.A.sum(axis=1).getA()) + 1 if sp.issparse(self.X): self.cooc_X = sp.csr_matrix(self.X.T.dot(self.X)) self.cooc_X[self.cooc_X.nonzero()] = 1 self.X_d = int(np.sum(X) / self.X.shape[0]) else: self.cooc_X = None self.X_d = None self.D_inv = sp.diags(1 / self.degree) self.D_inv_sqrt = sp.diags(1 / np.sqrt(self.degree)) self.dv = self.get_random_degrees(dmin) def get_random_degrees(self, dmin=1): """ assign degrees of vicious nodes randomly :param dmin: min degree assigned for vicious nodes :return: a numpy array contains the degrees of vicious nodes """ dv = np.zeros(self.num_vicious_nodes,dtype=int) + dmin for _ in range(int(self.num_vicious_edges-dmin*self.num_vicious_nodes)): dv[np.random.randint(0, self.num_vicious_nodes)] += 1 return dv def cal_loss(self, logits_attacked, idx): best_wrong_label = np.argmax(logits_attacked[idx, :] - 1000000 * self.Z[idx, :]) true_label = np.argmax(self.Z[idx, :]) loss_ = logits_attacked[idx, true_label] - logits_attacked[idx, best_wrong_label] return loss_ def classification_margins(self, probs, idx): true_label =
np.argmax(self.Z[idx, :])
numpy.argmax
import numpy as np #from scipy import interpolate import logging from psdtoolsx.terminology import Enum, Key, Type, Klass from psdtoolsx.constants import Tag from psdtoolsx.api.numpy_io import get_pattern, EXPECTED_CHANNELS logger = logging.getLogger(__name__) _COLOR_FUNC = { Klass.RGBColor: lambda x: x / 255., Klass.Grayscale: lambda x: (100. - x) / 100., Klass.CMYKColor: lambda x: (100 - x) / 100., Klass.LabColor: lambda x: x / 255., } def draw_vector_mask(layer): return _draw_path(layer, brush={'color': 255}) def draw_stroke(layer): desc = layer.stroke._data # _CAP = { # 'strokeStyleButtCap': 0, # 'strokeStyleSquareCap': 1, # 'strokeStyleRoundCap': 2, # } # _JOIN = { # 'strokeStyleMiterJoin': 0, # 'strokeStyleRoundJoin': 2, # 'strokeStyleBevelJoin': 3, # } width = float(desc.get('strokeStyleLineWidth', 1.)) # linejoin = desc.get('strokeStyleLineJoinType', None) # linejoin = linejoin.enum if linejoin else 'strokeStyleMiterJoin' # linecap = desc.get('strokeStyleLineCapType', None) # linecap = linecap.enum if linecap else 'strokeStyleButtCap' # miterlimit = desc.get('strokeStyleMiterLimit', 100.0) / 100. # aggdraw >= 1.3.12 will support additional params. return _draw_path( layer, pen={ 'color': 255, 'width': width, # 'linejoin': _JOIN.get(linejoin, 0), # 'linecap': _CAP.get(linecap, 0), # 'miterlimit': miterlimit, } ) def _draw_path(layer, brush=None, pen=None): height, width = layer._psd.height, layer._psd.width color = 0 if layer.vector_mask.initial_fill_rule and \ len(layer.vector_mask.paths) == 0: color = 1 mask = np.full((height, width, 1), color, dtype=np.float32) # Group merged path components. paths = [] for subpath in layer.vector_mask.paths: if subpath.operation == -1: paths[-1].append(subpath) else: paths.append([subpath]) # Apply shape operation. first = True for subpath_list in paths: plane = _draw_subpath(subpath_list, width, height, brush, pen) assert mask.shape == (height, width, 1) assert plane.shape == mask.shape op = subpath_list[0].operation if op == 0: # Exclude = Union - Intersect. mask = mask + plane - 2 * mask * plane elif op == 1: # Union (Combine). mask = mask + plane - mask * plane elif op == 2: # Subtract. if first and brush: mask = 1 - mask mask = np.maximum(0, mask - plane) elif op == 3: # Intersect. if first and brush: mask = 1 - mask mask = mask * plane first = False return np.minimum(1, np.maximum(0, mask)) def _draw_subpath(subpath_list, width, height, brush, pen): """ Rasterize Bezier curves. TODO: Replace aggdraw implementation with skimage.draw. """ from PIL import Image import aggdraw mask = Image.new('L', (width, height), 0) draw = aggdraw.Draw(mask) pen = aggdraw.Pen(**pen) if pen else None brush = aggdraw.Brush(**brush) if brush else None for subpath in subpath_list: if len(subpath) <= 1: logger.warning('not enough knots: %d' % len(subpath)) continue path = ' '.join(map(str, _generate_symbol(subpath, width, height))) symbol = aggdraw.Symbol(path) draw.symbol((0, 0), symbol, pen, brush) draw.flush() del draw return np.expand_dims(np.array(mask).astype(np.float32) / 255., 2) def _generate_symbol(path, width, height, command='C'): """Sequence generator for SVG path.""" if len(path) == 0: return # Initial point. yield 'M' yield path[0].anchor[1] * width yield path[0].anchor[0] * height yield command # Closed path or open path points = ( zip(path, path[1:] + path[0:1]) if path.is_closed() else zip(path, path[1:]) ) # Rest of the points. for p1, p2 in points: yield p1.leaving[1] * width yield p1.leaving[0] * height yield p2.preceding[1] * width yield p2.preceding[0] * height yield p2.anchor[1] * width yield p2.anchor[0] * height if path.is_closed(): yield 'Z' def create_fill_desc(layer, desc, viewport): """Create a fill image.""" if desc.classID == b'solidColorLayer': return draw_solid_color_fill(viewport, desc) if desc.classID == b'patternLayer': return draw_pattern_fill(viewport, layer._psd, desc) if desc.classID == b'gradientLayer': return draw_gradient_fill(viewport, desc) return None, None def create_fill(layer, viewport): """Create a fill image.""" if Tag.SOLID_COLOR_SHEET_SETTING in layer.tagged_blocks: desc = layer.tagged_blocks.get_data(Tag.SOLID_COLOR_SHEET_SETTING) return draw_solid_color_fill(viewport, desc) if Tag.PATTERN_FILL_SETTING in layer.tagged_blocks: desc = layer.tagged_blocks.get_data(Tag.PATTERN_FILL_SETTING) return draw_pattern_fill(viewport, layer._psd, desc) if Tag.GRADIENT_FILL_SETTING in layer.tagged_blocks: desc = layer.tagged_blocks.get_data(Tag.GRADIENT_FILL_SETTING) return draw_gradient_fill(viewport, desc) if Tag.VECTOR_STROKE_CONTENT_DATA in layer.tagged_blocks: stroke = layer.tagged_blocks.get_data(Tag.VECTOR_STROKE_DATA) if not stroke or stroke.get('fillEnabled').value is True: desc = layer.tagged_blocks.get_data(Tag.VECTOR_STROKE_CONTENT_DATA) if Key.Color in desc: return draw_solid_color_fill(viewport, desc) elif Key.Pattern in desc: return draw_pattern_fill(viewport, layer._psd, desc) elif Key.Gradient in desc: return draw_gradient_fill(viewport, desc) return None, None def draw_solid_color_fill(viewport, desc): """ Create a solid color fill. """ color_desc = desc.get(Key.Color) color_fn = _COLOR_FUNC.get(color_desc.classID, 1.0) fill = [color_fn(x) for x in color_desc.values()] height, width = viewport[3] - viewport[1], viewport[2] - viewport[0] color = np.full((height, width, len(fill)), fill, dtype=np.float32) return color, None def draw_pattern_fill(viewport, psd, desc): """ Create a pattern fill. """ pattern_id = desc[Enum.Pattern][Key.ID].value.rstrip('\x00') pattern = psd._get_pattern(pattern_id) if not pattern: logger.error('Pattern not found: %s' % (pattern_id)) return None, None panel = get_pattern(pattern) assert panel.shape[0] > 0 scale = float(desc.get(Key.Scale, 100.)) / 100. if scale != 1.: from skimage.transform import resize new_shape = ( max(1, int(panel.shape[0] * scale)), max(1, int(panel.shape[1] * scale)) ) panel = resize(panel, new_shape) height, width = viewport[3] - viewport[1], viewport[2] - viewport[0] reps = ( int(np.ceil(float(height) / panel.shape[0])), int(np.ceil(float(width) / panel.shape[1])), 1, ) channels = EXPECTED_CHANNELS.get(pattern.image_mode) pixels = np.tile(panel, reps)[:height, :width, :] if pixels.shape[2] > channels: return pixels[:, :, :channels], pixels[:, :, -1:] return pixels, None def draw_gradient_fill(viewport, desc): """ Create a gradient fill image. """ height, width = viewport[3] - viewport[1], viewport[2] - viewport[0] angle = float(desc.get(Key.Angle, 0)) scale = float(desc.get(Key.Scale, 100.)) / 100. ratio = (angle % 90) scale *= (90. - ratio) / 90. * width + (ratio / 90.) * height X, Y = np.meshgrid( np.linspace(-width / scale, width / scale, width, dtype=np.float32), np.linspace(-height / scale, height / scale, height, dtype=np.float32), ) gradient_kind = desc.get(Key.Type).enum if gradient_kind == Enum.Linear: Z = _make_linear_gradient(X, Y, angle) elif gradient_kind == Enum.Radial: Z = _make_radial_gradient(X, Y) elif gradient_kind == Enum.Angle: Z = _make_angle_gradient(X, Y, angle) elif gradient_kind == Enum.Reflected: Z = _make_reflected_gradient(X, Y, angle) elif gradient_kind == Enum.Diamond: Z = _make_diamond_gradient(X, Y, angle) else: # Unsupported: b'shapeburst', only avail in stroke effect logger.warning('Unknown gradient style: %s.' % (gradient_kind)) Z = np.full((height, width), 0.5, dtype=np.float32) Z = np.maximum(0., np.minimum(1., Z)) if bool(desc.get(Key.Reverse, False)): Z = 1. - Z G, Ga = _make_gradient_color(desc.get(Key.Gradient)) color = G(Z) if G is not None else None shape = np.expand_dims(Ga(Z), 2) if Ga is not None else None return color, shape def _make_linear_gradient(X, Y, angle): """Generates index map for linear gradients.""" theta = np.radians(angle % 360) Z = .5 * (np.cos(theta) * X - np.sin(theta) * Y + 1) return Z def _make_radial_gradient(X, Y): """Generates index map for radial gradients.""" Z = np.sqrt(
np.power(X, 2)
numpy.power
# -*- coding: utf-8 -*- import numpy as np import pandas as pd import utility_functions as utilfunc import sys import config # Import from support function repo import dispatch_functions as dFuncs import tariff_functions as tFuncs import decorators np.seterr(divide='ignore', invalid='ignore') #============================================================================== # Load logger logger = utilfunc.get_logger() #============================================================================== #%% def calc_system_size_and_financial_performance(agent): """ This function accepts the characteristics of a single agent and evaluates the financial performance of a set of solar+storage system sizes. The system size with the highest NPV is selected. Parameters ---------- agent : pandas.Series Single agent (row) from an agent dataframe. Returns ------- pandas.Series Agent with system size, business model and corresponding financial performance. """ #=========================================================================# # Setup #=========================================================================# try: in_cols = list(agent.index) if config.VERBOSE: logger.info(' ') logger.info("\tRunning system size calculations for: {}, {}, {}".format(agent['state'], agent['tariff_class'], agent['sector_abbr'])) logger.info('real_discount: {}'.format(agent['discount_rate'])) logger.info('loan_rate: {}'.format(agent['loan_rate'])) logger.info('down_payment: {}'.format(agent['down_payment'])) # Set resolution of dispatcher d_inc_n_est = 10 DP_inc_est = 12 d_inc_n_acc = 20 DP_inc_acc = 12 # Extract load profile load_profile = np.array(agent['consumption_hourly']) agent.loc['timesteps_per_year'] = 1 # Extract load profile pv_cf_profile = np.array(agent['solar_cf_profile']) / 1e3 agent['naep'] = float(np.sum(pv_cf_profile)) # Create battery object batt = dFuncs.Battery() batt_ratio = 3.0 tariff = tFuncs.Tariff(dict_obj=agent.loc['tariff_dict']) # Create export tariff object if agent['nem_system_size_limit_kw'] != 0: export_tariff = tFuncs.Export_Tariff(full_retail_nem=True) export_tariff.periods_8760 = tariff.e_tou_8760 export_tariff.prices = tariff.e_prices_no_tier else: export_tariff = tFuncs.Export_Tariff(full_retail_nem=False) original_bill, original_results = tFuncs.bill_calculator(load_profile, tariff, export_tariff) if config.VERBOSE: logger.info('original_bill: {}'.format(original_bill)) agent['first_year_elec_bill_without_system'] = original_bill * agent['elec_price_multiplier'] if config.VERBOSE: logger.info('multiplied original bill: {}'.format(agent['first_year_elec_bill_without_system'])) if agent['first_year_elec_bill_without_system'] == 0: agent['first_year_elec_bill_without_system']=1.0 agent['first_year_elec_cents_per_kwh_without_system'] = agent['first_year_elec_bill_without_system'] / agent['load_per_customer_in_bin_kwh'] #=========================================================================# # Estimate bill savings revenue from a set of solar+storage system sizes #=========================================================================# max_size_load = agent.loc['load_per_customer_in_bin_kwh']/agent.loc['naep'] max_size_roof = agent.loc['developable_roof_sqft'] * agent.loc['developable_buildings_pct'] * agent.loc['pv_power_density_w_per_sqft']/1000.0 agent.loc['max_pv_size'] = min([max_size_load, max_size_roof, agent.loc['nem_system_size_limit_kw']]) if config.VERBOSE: logger.info('max_size_load: {}'.format(max_size_load)) logger.info('max_size_roof: {}'.format(max_size_roof)) dynamic_sizing = True #False if dynamic_sizing: pv_sizes = np.arange(0, 1.1, 0.1) * agent.loc['max_pv_size'] else: # Size the PV system depending on NEM availability, either to 95% of load w/NEM, or 50% w/o NEM. In both cases, roof size is a constraint. if export_tariff.full_retail_nem==True: pv_sizes = np.array([min(max_size_load * 0.95, max_size_roof)]) else: pv_sizes = np.array([min(max_size_load * 0.5, max_size_roof)]) batt_powers = np.zeros(1) # Calculate the estimation parameters for each PV size est_params_df = pd.DataFrame(index=pv_sizes) est_params_df['estimator_params'] = 'temp' for pv_size in pv_sizes: load_and_pv_profile = load_profile - pv_size*pv_cf_profile est_params_df.at[pv_size, 'estimator_params'] = dFuncs.calc_estimator_params(load_and_pv_profile, tariff, export_tariff, batt.eta_charge, batt.eta_discharge) # Create df with all combinations of solar+storage sizes system_df = pd.DataFrame(dFuncs.cartesian([pv_sizes, batt_powers]), columns=['pv', 'batt_kw']) system_df['est_bills'] = None pv_kwh_by_year = np.array([sum(x) for x in np.split(np.array(pv_cf_profile), agent.loc['timesteps_per_year'])]) pv_kwh_by_year = np.concatenate([(pv_kwh_by_year - ( pv_kwh_by_year * agent.loc['pv_deg'] * i)) for i in range(1, agent.loc['economic_lifetime']+1)]) system_df['kwh_by_timestep'] = system_df['pv'].apply(lambda x: x * pv_kwh_by_year) n_sys = len(system_df) for i in system_df.index: pv_size = system_df['pv'][i].copy() load_and_pv_profile = load_profile - pv_size*pv_cf_profile # for buy all sell all agents: calculate value of generation based on wholesale prices and subtract from original bill if agent.loc['compensation_style'] == 'Buy All Sell All': sell_all = np.sum(pv_size * pv_cf_profile * agent.loc['wholesale_elec_use_per_kwh']) system_df.loc[i, 'est_bills'] = original_bill - sell_all # for net billing agents: if system size within policy limits, set sell rate to wholesale price -- otherwise, set sell rate to 0 elif (agent.loc['compensation_style'] == 'Net Billing (Wholesale)') or (agent.loc['compensation_style'] == 'Net Billing (Avoided Cost)'): export_tariff = tFuncs.Export_Tariff(full_retail_nem=False) if pv_size<=agent.loc['nem_system_size_limit_kw']: if agent.loc['compensation_style'] == 'Net Billing (Wholesale)': export_tariff.set_constant_sell_price(agent.loc['wholesale_elec_usd_per_kwh']) elif agent.loc['compensation_style'] == 'Net Billing (Avoided Cost)': export_tariff.set_constant_sell_price(agent.loc['hourly_excess_sell_rate_usd_per_kwh']) else: export_tariff.set_constant_sell_price(0.) batt_power = system_df['batt_kw'][i].copy() batt.set_cap_and_power(batt_power*batt_ratio, batt_power) if batt_power > 0: estimator_params = est_params_df.loc[system_df['pv'][i].copy(), 'estimator_params'] estimated_results = dFuncs.determine_optimal_dispatch(load_profile, pv_size*pv_cf_profile, batt, tariff, export_tariff, estimator_params=estimator_params, estimated=True, DP_inc=DP_inc_est, d_inc_n=d_inc_n_est, estimate_demand_levels=True) system_df.loc[i, 'est_bills'] = estimated_results['bill_under_dispatch'] else: bill_with_PV, _ = tFuncs.bill_calculator(load_and_pv_profile, tariff, export_tariff) system_df.loc[i, 'est_bills'] = bill_with_PV #+ one_time_charge # for net metering agents: if system size within policy limits, set full_retail_nem=True -- otherwise set export value to wholesale price elif agent.loc['compensation_style'] == 'Net Metering': if pv_size<=agent.loc['nem_system_size_limit_kw']: export_tariff = tFuncs.Export_Tariff(full_retail_nem=True) export_tariff.periods_8760 = tariff.e_tou_8760 export_tariff.prices = tariff.e_prices_no_tier else: export_tariff = tFuncs.Export_Tariff(full_retail_nem=False) export_tariff.set_constant_sell_price(agent.loc['wholesale_elec_usd_per_kwh']) batt_power = system_df['batt_kw'][i].copy() batt.set_cap_and_power(batt_power*batt_ratio, batt_power) if batt_power > 0: estimator_params = est_params_df.loc[system_df['pv'][i].copy(), 'estimator_params'] estimated_results = dFuncs.determine_optimal_dispatch(load_profile, pv_size*pv_cf_profile, batt, tariff, export_tariff, estimator_params=estimator_params, estimated=True, DP_inc=DP_inc_est, d_inc_n=d_inc_n_est, estimate_demand_levels=True) system_df.loc[i, 'est_bills'] = estimated_results['bill_under_dispatch'] else: bill_with_PV, _ = tFuncs.bill_calculator(load_and_pv_profile, tariff, export_tariff) system_df.loc[i, 'est_bills'] = bill_with_PV #+ one_time_charge # for agents with no compensation mechanism: set sell rate to 0 and calculate bill with net load profile else: export_tariff = tFuncs.Export_Tariff(full_retail_nem=False) export_tariff.set_constant_sell_price(0.) batt_power = system_df['batt_kw'][i].copy() batt.set_cap_and_power(batt_power*batt_ratio, batt_power) if batt_power > 0: estimator_params = est_params_df.loc[system_df['pv'][i].copy(), 'estimator_params'] estimated_results = dFuncs.determine_optimal_dispatch(load_profile, pv_size*pv_cf_profile, batt, tariff, export_tariff, estimator_params=estimator_params, estimated=True, DP_inc=DP_inc_est, d_inc_n=d_inc_n_est, estimate_demand_levels=True) system_df.loc[i, 'est_bills'] = estimated_results['bill_under_dispatch'] else: bill_with_PV, _ = tFuncs.bill_calculator(load_and_pv_profile, tariff, export_tariff) system_df.loc[i, 'est_bills'] = bill_with_PV #+ one_time_charge # Calculate bill savings cash flow # elec_price_multiplier is the scalar increase in the cost of electricity since 2016, when the tariffs were curated # elec_price_escalator is this agent's assumption about how the price of electricity will change in the future. avg_est_bill_savings = (original_bill - np.array(system_df['est_bills'])).reshape([n_sys, 1]) * agent['elec_price_multiplier'] est_bill_savings = np.zeros([n_sys, agent['economic_lifetime']+1]) est_bill_savings[:,1:] = avg_est_bill_savings escalator = (np.zeros(agent['economic_lifetime']+1) + agent['elec_price_escalator'] + 1)**list(range(agent['economic_lifetime']+1)) degradation = (np.zeros(agent['economic_lifetime']+1) + 1 - agent['pv_deg'])**list(range(agent['economic_lifetime']+1)) est_bill_savings = est_bill_savings * escalator * degradation system_df['est_bill_savings'] = est_bill_savings[:, 1] # simple representation of 70% minimum of batt charging from PV in order to # qualify for the ITC. Here, if batt kW is greater than 25% of PV kW, no ITC. batt_chg_frac = np.where(system_df['pv'] >= system_df['batt_kw']*4.0, 1.0, 0) #=========================================================================# # Determine financial performance of each system size #=========================================================================# if 'investment_incentive_pct' in agent.index: if agent['investment_incentive_year_cutoff'] >= agent['year']: investment_incentives = np.full(system_df.shape[0], agent['investment_incentive_pct']) else: investment_incentives = np.zeros(system_df.shape[0]) else: investment_incentives = np.zeros(system_df.shape[0]) if 'capacity_incentive' in agent.index: raise NotImplementedError else: capacity_based_incentives = np.zeros(system_df.shape[0]) if 'production_incentive' in agent.index: raise NotImplementedError else: production_based_incentives = np.tile(np.array([0]*agent.loc['economic_lifetime']), (system_df.shape[0],1)) if 'cash_incentives' in agent.index: raise NotImplementedError else: cash_incentives = np.array([0]*system_df.shape[0]) cf_results_est = cashflow_constructor(bill_savings=est_bill_savings, pv_size=np.array(system_df['pv']), pv_price=agent.loc['pv_price_per_kw'], pv_om=agent.loc['pv_om_per_kw'], batt_cap=np.array(system_df['batt_kw'])*batt_ratio, batt_power=np.array(system_df['batt_kw']), batt_cost_per_kw=agent.loc['batt_price_per_kw'], batt_cost_per_kwh=agent.loc['batt_price_per_kwh'], batt_om_per_kw=agent.loc['batt_om_per_kw'], batt_om_per_kwh=agent.loc['batt_om_per_kwh'], batt_chg_frac=batt_chg_frac, sector=agent.loc['sector_abbr'], itc=agent.loc['itc_fraction'], deprec_sched=agent.loc['deprec_sch'], fed_tax_rate=agent['tax_rate'], state_tax_rate=0, real_d=agent['discount_rate'], analysis_years=agent.loc['economic_lifetime'], inflation=agent.loc['inflation'], down_payment_fraction=agent.loc['down_payment'], loan_rate=agent.loc['loan_rate'], loan_term=agent.loc['loan_term'], cash_incentives=cash_incentives, ibi=investment_incentives, cbi=capacity_based_incentives, pbi=production_based_incentives) system_df['npv'] = cf_results_est['npv'] #=========================================================================# # Select system size and business model for this agent #=========================================================================# index_of_best_fin_perform_ho = system_df['npv'].idxmax() opt_pv_size = system_df['pv'][index_of_best_fin_perform_ho].copy() opt_batt_power = system_df['batt_kw'][index_of_best_fin_perform_ho].copy() opt_batt_cap = opt_batt_power*batt_ratio batt.set_cap_and_power(opt_batt_cap, opt_batt_power) tariff = tFuncs.Tariff(dict_obj=agent.loc['tariff_dict']) # for buy all sell all agents: calculate value of generation based on wholesale prices and subtract from original bill if agent.loc['compensation_style'] == 'Buy All Sell All': sell_all = np.sum(opt_pv_size * pv_cf_profile * agent.loc['wholesale_elec_usd_per_kwh']) opt_bill = original_bill - sell_all # package into "dummy" dispatch results dictionary accurate_results = {'bill_under_dispatch' : opt_bill, 'batt_dispatch_profile' : np.zeros(len(load_profile))} # for net billing agents: if system size within policy limits, set sell rate to wholesale price -- otherwise, set sell rate to 0 elif (agent.loc['compensation_style'] == 'Net Billing (Wholesale)') or (agent.loc['compensation_style'] == 'Net Billing (Avoided Cost)'): export_tariff = tFuncs.Export_Tariff(full_retail_nem=False) if opt_pv_size<=agent.loc['nem_system_size_limit_kw']: if agent.loc['compensation_style'] == 'Net Billing (Wholesale)': export_tariff.set_constant_sell_price(agent.loc['wholesale_elec_usd_per_kwh']) elif agent.loc['compensation_style'] == 'Net Billing (Avoided Cost)': export_tariff.set_constant_sell_price(agent.loc['hourly_excess_sell_rate_usd_per_kwh']) else: export_tariff.set_constant_sell_price(0.) accurate_results = dFuncs.determine_optimal_dispatch(load_profile, opt_pv_size*pv_cf_profile, batt, tariff, export_tariff, estimated=False, d_inc_n=d_inc_n_acc, DP_inc=DP_inc_acc) # for net metering agents: if system size within policy limits, set full_retail_nem=True -- otherwise set export value to wholesale price elif agent.loc['compensation_style'] == 'Net Metering': export_tariff = tFuncs.Export_Tariff(full_retail_nem=True) if opt_pv_size<=agent.loc['nem_system_size_limit_kw']: export_tariff = tFuncs.Export_Tariff(full_retail_nem=True) export_tariff.periods_8760 = tariff.e_tou_8760 export_tariff.prices = tariff.e_prices_no_tier else: export_tariff = tFuncs.Export_Tariff(full_retail_nem=False) export_tariff.set_constant_sell_price(agent.loc['wholesale_elec_usd_per_kwh']) accurate_results = dFuncs.determine_optimal_dispatch(load_profile, opt_pv_size*pv_cf_profile, batt, tariff, export_tariff, estimated=False, d_inc_n=d_inc_n_acc, DP_inc=DP_inc_acc) else: export_tariff = tFuncs.Export_Tariff(full_retail_nem=False) export_tariff.set_constant_sell_price(0.) accurate_results = dFuncs.determine_optimal_dispatch(load_profile, opt_pv_size*pv_cf_profile, batt, tariff, export_tariff, estimated=False, d_inc_n=d_inc_n_acc, DP_inc=DP_inc_acc) # add system size class system_size_breaks = [0.0, 2.5, 5.0, 10.0, 20.0, 50.0, 100.0, 250.0, 500.0, 750.0, 1000.0, 1500.0, 3000.0] #=========================================================================# # Determine dispatch trajectory for chosen system size #=========================================================================# opt_bill = accurate_results['bill_under_dispatch'] #+ one_time_charge agent.loc['first_year_elec_bill_with_system'] = opt_bill * agent.loc['elec_price_multiplier'] agent.loc['first_year_elec_bill_savings'] = agent.loc['first_year_elec_bill_without_system'] - agent.loc['first_year_elec_bill_with_system'] agent.loc['first_year_elec_bill_savings_frac'] = agent.loc['first_year_elec_bill_savings'] / agent.loc['first_year_elec_bill_without_system'] opt_bill_savings = np.zeros([1, agent.loc['economic_lifetime'] + 1]) opt_bill_savings[:, 1:] = (original_bill - opt_bill) opt_bill_savings = opt_bill_savings * agent.loc['elec_price_multiplier'] * escalator * degradation # If the batt kW is less than 25% of the PV kW, apply the ITC if opt_pv_size >= opt_batt_power*4: batt_chg_frac = 1.0 else: batt_chg_frac = 0.0 cash_incentives = np.array([cash_incentives[index_of_best_fin_perform_ho]]) investment_incentives = np.array([investment_incentives[index_of_best_fin_perform_ho]]) capacity_based_incentives = np.array([capacity_based_incentives[index_of_best_fin_perform_ho]]) production_based_incentives = np.array(production_based_incentives[index_of_best_fin_perform_ho]) cf_results_opt = cashflow_constructor(bill_savings=opt_bill_savings, pv_size=opt_pv_size, pv_price=agent.loc['pv_price_per_kw'], pv_om=agent.loc['pv_om_per_kw'], batt_cap=opt_batt_cap, batt_power=opt_batt_power, batt_cost_per_kw=agent.loc['batt_price_per_kw'], batt_cost_per_kwh=agent.loc['batt_price_per_kwh'], batt_om_per_kw=agent['batt_om_per_kw'], batt_om_per_kwh=agent['batt_om_per_kwh'], batt_chg_frac=batt_chg_frac, sector=agent.loc['sector_abbr'], itc=agent.loc['itc_fraction'], deprec_sched=agent.loc['deprec_sch'], fed_tax_rate=agent.loc['tax_rate'], state_tax_rate=0, real_d=agent.loc['discount_rate'], analysis_years=agent.loc['economic_lifetime'], inflation=agent.loc['inflation'], down_payment_fraction=agent.loc['down_payment'], loan_rate=agent.loc['loan_rate'], loan_term=agent.loc['loan_term'], cash_incentives=cash_incentives, ibi=investment_incentives, cbi=capacity_based_incentives, pbi=production_based_incentives) #=========================================================================# # Package results #=========================================================================# agent['pv_kw'] = opt_pv_size agent['batt_kw'] = opt_batt_power agent['batt_kwh'] = opt_batt_cap agent['npv'] = cf_results_opt['npv'][0] agent['cash_flow'] = cf_results_opt['cf'][0] agent['batt_dispatch_profile'] = accurate_results['batt_dispatch_profile'] agent['bill_savings'] = opt_bill_savings agent['aep'] = agent['pv_kw'] * agent['naep'] agent['cf'] = agent['naep']/8760 agent['system_size_factors'] = np.where(agent['pv_kw'] == 0, 0, pd.cut([agent['pv_kw']], system_size_breaks))[0] agent['export_tariff_results'] = original_results out_cols = list(agent.index) new_cols = [i for i in out_cols if i not in in_cols] + ['agent_id'] agent = agent.loc[agent.index.isin(new_cols)] except Exception as e: logger.info(' ') logger.info('--------------------------------------------') logger.info("failed in calc_system_size_and_financial_performance") logger.info(('Error on line {}'.format(sys.exc_info()[-1].tb_lineno), type(e), e)) logger.info('agent that failed') logger.info(agent) logger.info('--------------------------------------------') agent.to_pickle('agent_that_failed.pkl') return agent #%% @decorators.fn_timer(logger = logger, tab_level = 2, prefix = '') def calc_financial_performance(dataframe): """ Function to calculate the payback period and join it on the agent dataframe. Parameters ---------- dataframe : pandas.DataFrame Agent dataframe Returns ------- pandas.DataFrame Agent dataframe with `payback_period` joined on dataframe """ # dataframe = dataframe.reset_index() cfs = np.vstack(dataframe['cash_flow']).astype(np.float) # calculate payback period tech_lifetime = np.shape(cfs)[1] - 1 payback = calc_payback_vectorized(cfs, tech_lifetime) # calculate time to double ttd = calc_ttd(cfs) metric_value = np.where(dataframe['sector_abbr']=='res', payback, ttd) dataframe['metric_value'] = metric_value dataframe = dataframe.set_index('agent_id') return dataframe #%% @decorators.fn_timer(logger = logger, tab_level = 2, prefix = '') def calc_max_market_share(dataframe, max_market_share_df): """ Calculates the maximum marketshare available for each agent. Parameters ---------- dataframe : pandas.DataFrame Attributes ---------- metric_value : float max_market_share_df : pandas.DataFrame Set by :meth:`settings.ScenarioSettings.get_max_marketshare`. Returns ------- pandas.DataFrame Input DataFrame with `max_market_share` and `metric` columns joined on. """ in_cols = list(dataframe.columns) dataframe = dataframe.reset_index() dataframe['business_model'] = 'host_owned' dataframe['metric'] = 'payback_period' # Convert metric value to integer as a primary key, then bound within max market share ranges max_payback = max_market_share_df[max_market_share_df.metric == 'payback_period'].metric_value.max() min_payback = max_market_share_df[max_market_share_df.metric == 'payback_period'].metric_value.min() max_mbs = max_market_share_df[max_market_share_df.metric == 'percent_monthly_bill_savings'].metric_value.max() min_mbs = max_market_share_df[max_market_share_df.metric == 'percent_monthly_bill_savings'].metric_value.min() # copy the metric valeus to a new column to store an edited version metric_value_bounded = dataframe['metric_value'].values.copy() # where the metric value exceeds the corresponding max market curve bounds, set the value to the corresponding bound metric_value_bounded[np.where((dataframe.metric == 'payback_period') & (dataframe['metric_value'] < min_payback))] = min_payback metric_value_bounded[np.where((dataframe.metric == 'payback_period') & (dataframe['metric_value'] > max_payback))] = max_payback metric_value_bounded[np.where((dataframe.metric == 'percent_monthly_bill_savings') & (dataframe['metric_value'] < min_mbs))] = min_mbs metric_value_bounded[np.where((dataframe.metric == 'percent_monthly_bill_savings') & (dataframe['metric_value'] > max_mbs))] = max_mbs dataframe['metric_value_bounded'] = metric_value_bounded # scale and round to nearest int dataframe['metric_value_as_factor'] = [int(round(i,1) * 100) for i in dataframe['metric_value_bounded']] # add a scaled key to the max_market_share dataframe too max_market_share_df['metric_value_as_factor'] = [int(round(float(i), 1) * 100) for i in max_market_share_df['metric_value']] # Join the max_market_share table and dataframe in order to select the ultimate mms based on the metric value. dataframe = pd.merge(dataframe, max_market_share_df[['sector_abbr', 'max_market_share','metric_value_as_factor', 'metric', 'business_model']], how = 'left', on = ['sector_abbr','metric_value_as_factor','metric', 'business_model']) # Derate the maximum market share for commercial and industrial customers in leased buildings by (2/3) # based on the owner occupancy status (1 = owner-occupied, 2 = leased) dataframe['max_market_share'] = np.where(dataframe['owner_occupancy_status'] == 2, dataframe['max_market_share']/3,dataframe['max_market_share']) # out_cols = in_cols + ['max_market_share', 'metric'] out_cols = in_cols + ['max_market_share', 'metric_value_as_factor', 'metric', 'metric_value_bounded'] return dataframe[out_cols] def calc_ttd(cfs): """ Calculate time to double investment based on the MIRR. This is used for the commercial and industrial sectors. Parameters ---------- cfs : numpy.ndarray Project cash flows ($/yr). Returns ------- ttd : numpy.ndarray Time to double investment (years). """ irrs = virr(cfs, precision = 0.005, rmin = 0, rmax1 = 0.3, rmax2 = 0.5) # suppress errors due to irrs of nan with np.errstate(invalid = 'ignore'): irrs = np.where(irrs<=0,1e-6,irrs) ttd = np.log(2) / np.log(1 + irrs) ttd[ttd <= 0] = 0 ttd[ttd > 30] = 30.1 # also deal with ttd of nan by setting to max payback period (this should only occur when cashflows = 0) if not np.all(np.isnan(ttd) == np.all(cfs == 0, axis = 1)): raise Exception("np.nan found in ttd for non-zero cashflows") ttd[np.isnan(ttd)] = 30.1 return ttd.round(decimals = 1) # must be rounded to nearest 0.1 to join with max_market_share #%% def cashflow_constructor(bill_savings, pv_size, pv_price, pv_om, batt_cap, batt_power, batt_cost_per_kw, batt_cost_per_kwh, batt_om_per_kw, batt_om_per_kwh, batt_chg_frac, sector, itc, deprec_sched, fed_tax_rate, state_tax_rate, real_d, analysis_years, inflation, down_payment_fraction, loan_rate, loan_term, cash_incentives=np.array([0]), ibi=np.array([0]), cbi=np.array([0]), pbi=np.array([[0]]), print_statements=False): """ Calculate the system cash flows based on the capex, opex, bill savings, incentives, tax implications, and other factors Parameters ---------- bill_savings : "numpy.ndarray" Annual bill savings ($/yr) from system adoption from 1st year through system lifetime pv_size : "numpy.float64" system capacity selected by agent (kW) pv_price : "float" system capex ($/kW) pv_om : "float" system operation and maintanence cost ($/kW) batt_cap : "numpy.float64" energy capacity of battery selected (kWh) batt_power : "numpy.float64" demand capacity of battery selected (kW) batt_cost_per_kw : "float" capex of battery per kW installed ($/kW) batt_cost_per_kwh : "float" capex of battery per kWh installed ($/kWh) batt_om_per_kw : "float" opex of battery per kW installed ($/kW-yr) batt_om_per_kwh : "float" opex of battery per kW installed ($/kWh-yr) batt_chg_frac : "int" fraction of the battery's energy that it gets from a co-hosted PV system. Used for ITC calculation. sector : "str" agent sector itc : "float" fraction of capex offset by federal investment tax credit deprec_sched : "list" fraction of capex eligible for tax-based depreciation fed_tax_rate : "float" average tax rate as fraction from federal taxes state_tax_rate : "int" average tax rate as fraction from state taxes real_d : "float" annua discount rate in real terms analysis_years : "int" number of years to use in economic analysis inflation : "float" annual average inflation rate as fraction e.g. 0.025 down_payment_fraction : "int" fraction of capex used as system down payment loan_rate_real : "float" real interest rate for debt payments loan_term : "int" number of years for loan term cash_incentives : "numpy.ndarray" array describing eligible cash-based incentives e.g. $ ibi : "numpy.ndarray" array describing eligible investment-based incentives e.g. 0.2 cbi : "numpy.ndarray" array describing eligible one-time capacity-based incentives e.g. $/kW pbi : "numpy.ndarray" array describing eligible ongoing performance-based incentives e.g $/kWh-yr Returns ------- cf : 'dtype Annual cash flows of project investment ($/yr) cf_discounted : 'dtype' Annual discounted cash flows of project investment ($/yr) npv : 'dtype' Net present value ($) of project investment using WACC bill_savings : 'dtype' Nominal cash flow of the annual bill savings over the lifetime of the system after_tax_bill_savings : 'dtype' Effective after-tax bill savings (electricity costs are tax-deductible for commercial entities) pv_cost : 'dtype' Capex of system in ($) batt_cost : 'dtype' Capex of battery in ($) installed_cost : 'dtype' Combined capex of system + battery up_front_cost : 'dtype Capex in 0th year as down payment batt_om_cf : 'dtype' Annual cashflows of battery opex operating_expenses : 'dtype' Combined annual opex of system + battery ($/yr) pv_itc_value : 'dtype' Absolute value of investment tax credit for system ($) batt_itc_value : 'dtype' Absolute value of investment tax credit for battery ($) itc_value : 'dtype' Absolute value of investment tax credit for combined system + battery ($) deprec_basis : 'dtype' Absolute value of depreciable basis of system ($) deprec_deductions : 'dtype' Annual amount of depreciable capital in given year ($) initial_debt : 'dtype' Amount of debt for loan ($) annual_principal_and_interest_payment : 'dtype' Annual amount of debt service payment, principal + interest ($) debt_balance : 'dtype' Annual amount of debt remaining in given year ($) interest_payments : 'dtype' Annual amount of interest payment in given year ($) principal_and_interest_payments : 'dtype' Array of annual principal and interest payments ($) total_taxable_income : 'dtype' Amount of stateincome from incentives eligible for taxes state_deductions : 'dtype' Reduction to state taxable income from interest, operating expenses, or bill savings depending on sector total_taxable_state_income_less_deductions : 'dtype' Total taxable state income less any applicable deductions state_income_taxes : 'dtype' Amount of state income tax i.e. net taxable income by tax rate fed_deductions : 'dtype' Reduction to federal taxable income from interest, operating expenses, or bill savings depending on sector total_taxable_fed_income_less_deductions : 'dtype' Total taxable federal income less any applicable deductions fed_income_taxes : 'dtype' Amount of federal income tax i.e. net taxable income by tax rate interest_payments_tax_savings : 'dtype' Amount of tax savings from deductions of interest payments operating_expenses_tax_savings : 'dtype' Amount of tax savings from deductions of operating expenses deprec_deductions_tax_savings : 'dtype' Amount of tax savings from deductions of capital depreciation elec_OM_deduction_decrease_tax_liability : 'dtype' Amount of tax savings from deductions of electricity costs as deductible business expense Todo ---- 1) Sales tax basis and rate 2) note that sales tax goes into depreciable basis 3) Propery taxes (res can deduct from income taxes, I think) 4) insurance 5) add pre-tax cash flow 6) add residential mortgage option 7) add carbon tax revenue 8) More exhaustive checking. I have confirmed basic formulations against SAM, but there are many permutations that haven't been checked. 9) make incentives reduce depreciable basis 10) add a flag for high incentive levels 11) battery price schedule, for replacements 12) improve inverter replacement 13) improve battery replacement 14) add inflation adjustment for replacement prices 15) improve deprec schedule handling 16) Make financing unique to each agent 17) Make battery replacements depreciation an input, with default of 7 year MACRS 18) Have a better way to deal with capacity vs effective capacity and battery costs 19) Make it so it can accept different loan terms """ #################### Massage inputs ######################################## # If given just a single value for an agent-specific variable, repeat that # variable for each agent. This assumes that the variable is intended to be # applied to each agent. if np.size(np.shape(bill_savings)) == 1: shape = (1, analysis_years + 1) else: shape = (np.shape(bill_savings)[0], analysis_years + 1) n_agents = shape[0] if np.size(sector) != n_agents or n_agents == 1: sector = np.repeat(sector, n_agents) if np.size(fed_tax_rate) != n_agents or n_agents == 1: fed_tax_rate = np.repeat(fed_tax_rate, n_agents) if np.size(state_tax_rate) != n_agents or n_agents == 1: state_tax_rate = np.repeat(state_tax_rate, n_agents) if np.size(itc) != n_agents or n_agents == 1: itc = np.repeat(itc, n_agents) if np.size(pv_size) != n_agents or n_agents == 1: pv_size = np.repeat(pv_size, n_agents) if np.size(pv_price) != n_agents or n_agents == 1: pv_price = np.repeat(pv_price, n_agents) if np.size(pv_om) != n_agents or n_agents == 1: pv_om = np.repeat(pv_om, n_agents) if np.size(batt_cap) != n_agents or n_agents == 1: batt_cap =
np.repeat(batt_cap, n_agents)
numpy.repeat
""" Copyright 2017 <NAME>, <NAME> Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: 1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. 2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. 3. Neither the name of the copyright holder nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. """ import numpy as np import scipy as sp import math import matplotlib.pyplot as plt from . import solver from . import project_simplex_box from . import pgd import llops as yp import llops.operators as ops from llops.solvers import iterative, objectivefunctions from llops import iFt, Ft from llops.config import default_backend, default_dtype eps = 1e-13 def dnf(x): if len(x) == 0: return 0 else: # x = x / np.sum(x) x_fft = np.fft.fft(x) sigma_x = np.abs(x_fft) ** 2 return np.sqrt(1 / len(x) * np.sum(np.max(sigma_x) / sigma_x)) def cond(x): if len(x) == 0: return 0 else: # x = x / np.sum(x) x_fft = np.fft.fft(x) sigma_x = np.abs(x_fft) return np.max(sigma_x) / np.min(sigma_x) def vector(pulse_count, kernel_length=None, method='random_phase', n_tests=100, metric='dnf', dtype=None, backend=None): """ This is a helper function for solving for a blur vector in terms of it's condition # """ # Parse dtype and backend dtype = dtype if dtype is not None else yp.config.default_dtype backend = backend if backend is not None else yp.config.default_backend # Calculate kernel length if not provided if kernel_length is None: kernel_length = 2 * pulse_count # Compute many kernels kernel_list = [] for _ in range(n_tests): # Generate blur kernel if method == 'random_phase': # Ensure first and last time point are illuminated indicies = np.random.choice(kernel_length, size=(pulse_count - 2), replace=False) illum = np.zeros(kernel_length) illum[indicies] = 1.0 illum[0], illum[-1] = 1.0, 1.0 elif method == 'random': illum = np.random.uniform(size=kernel_length) else: raise ValueError('Invalid kernel generation method %s' % method) # Append kernel to list kernel_list.append(illum) ## Choose best kernel if metric == 'cond': # Determine kernel with best condition # metric_best = 1e10 kernel_best = [] for kernel in kernel_list: kappa = cond(kernel) if kappa < metric_best: kernel_best = kernel metric_best = kappa elif metric == 'dnf': # Determine kernel with best dnf metric_best = 1e10 kernel_best = [] for kernel in kernel_list: _dnf = dnf(kernel) if _dnf < metric_best: kernel_best = kernel metric_best = _dnf else: raise ValueError # Normalize kernel kernel_best /= np.sum(kernel_best) # Cast kernel_best = yp.cast(kernel_best, dtype, backend) return (kernel_best, metric_best) def kernel(shape, pulse_count, kernel_length=None, method='random_phase', n_tests=100, metric='dnf', axis=1, position='center'): # Generate blur vector blur_vector, _ = vector(pulse_count, kernel_length=kernel_length, method=method, n_tests=n_tests, metric=metric) # Generate kernel from vector return fromVector(blur_vector, shape=shape, axis=axis, position=position) def generate(shape, blur_kernel_length, method='random_phase', axis=1, blur_illumination_fraction=0.5, position='center',normalize=True): # Generate blur kernel if method == 'constant': illum = yp.ones(blur_kernel_length) * blur_illumination_fraction elif method == 'random_phase' or method == 'coded': illum, _ = genRandInitialization(blur_kernel_length, blur_illumination_fraction) elif method == 'random' or method == 'uniform': illum = np.random.uniform(size=blur_kernel_length) else: assert False, "method " + method + " unrecognized" # Generate kernel kernel = fromVector(illum, shape, axis, position, normalize=normalize) # Return kernel return kernel def fromVector(blur_vector, shape, axis=1, position='center', normalize=True, reverse=False, interpolation_factor=1.0): """Converts a blur vector to a blur kernel.""" # Get length of kernel blur_kernel_length = yp.size(blur_vector) # Find correct dimension ndims = len(shape) # Expand illum to 2D and ensure it's in the correct direction blur_vector = yp.expandDims(blur_vector, ndims) # Reverse blur vector if requested if reverse: blur_vector = yp.flip(blur_vector) # Ensure blur vector is 1D blur_vector = yp.vec(blur_vector) # Apply interpolation if interpolation_factor != 1.0: interpolated_length = int(np.round(interpolation_factor * len(blur_vector))) blur_vector = yp.real(yp.iFt(yp.pad(yp.Ft(blur_vector), interpolated_length, center=True))) # Ensure blur kernel has the correct dimensions blur_vector = yp.expandDims(blur_vector, ndims) # Rotate if necessary if axis == 1: blur_vector = blur_vector.T # Position kernel in image if position == 'center': kernel = yp.pad(blur_vector, shape, center=True) elif position == 'center_left': roll_amount = [0, 0] roll_amount[axis] = -blur_kernel_length // 2 kernel = yp.roll(yp.pad(blur_vector, shape, center=True), roll_amount) elif position == 'center_right': roll_amount = [0, 0] roll_amount[axis] = blur_kernel_length // 2 kernel = yp.roll(yp.pad(blur_vector, shape, center=True), roll_amount) elif position == 'origin': kernel = yp.pad(blur_vector, shape, crop_start=(0, 0)) else: raise ValueError('Invalid position %s' % position) # Center kernel after pad. This is a hack. roll_values = [1] * yp.ndim(kernel) kernel = yp.roll(kernel, roll_values) # Normalize kernel if normalize: kernel /= yp.scalar(yp.sum(kernel)) return kernel ###################################################################################################### ################################ UTILITIES FOR READING FROM DATA ##################################### ###################################################################################################### def blurVectorsFromDataset(dataset, dtype=None, backend=None, debug=False, use_phase_ramp=False, corrections={}): """ This function generates the object size, image size, and blur kernels from a comptic dataset object. Args: dataset: An io.Dataset object dtype [np.float32]: Which datatype to use for kernel generation (All numpy datatypes supported) Returns: object_size: The object size this dataset can recover image_size: The computed image size of the dataset blur_kernel_list: A dictionary of blur kernels lists, one key per color channel. """ dtype = dtype if dtype is not None else yp.config.default_dtype backend = backend if backend is not None else yp.config.default_backend # Calculate effective pixel size if necessaey if dataset.metadata.system.eff_pixel_size_um is None: dataset.metadata.system.eff_pixel_size_um = dataset.metadata.camera.pixel_size_um / \ (dataset.metadata.objective.mag * dataset.metadata.system.mag) # Recover and store position and illumination list blur_vector_roi_list = [] position_list, illumination_list = [], [] frame_segment_map = [] for frame_index in range(len(dataset.frame_list)): frame_state = dataset.frame_state_list[frame_index] # Store which segment this measurement uses frame_segment_map.append(frame_state['position']['common']['linear_segment_index']) # Extract list of illumination values for each time point if 'illumination' in frame_state: illumination_list_frame = [] for time_point in frame_state['illumination']['states']: illumination_list_time_point = [] for illumination in time_point: illumination_list_time_point.append( {'index': illumination['index'], 'value': illumination['value']}) illumination_list_frame.append(illumination_list_time_point) else: raise ValueError('Frame %d does not contain illumination information' % frame_index) # Extract list of positions for each time point if 'position' in frame_state: position_list_frame = [] for time_point in frame_state['position']['states']: position_list_time_point = [] for position in time_point: if 'units' in position['value']: if position['value']['units'] == 'mm': ps_um = dataset.metadata.system.eff_pixel_size_um position_list_time_point.append( [1000 * position['value']['y'] / ps_um, 1000 * position['value']['x'] / ps_um]) elif position['value']['units'] == 'um': position_list_time_point.append( [position['value']['y'] / ps_um, position['value']['x'] / ps_um]) elif position['value']['units'] == 'pixels': position_list_time_point.append([position['value']['y'], position['value']['x']]) else: raise ValueError('Invalid units %s for position in frame %d' % (position['value']['units'], frame_index)) else: # print('WARNING: Could not find posiiton units in metadata, assuming mm') ps_um = dataset.metadata.system.eff_pixel_size_um position_list_time_point.append( [1000 * position['value']['y'] / ps_um, 1000 * position['value']['x'] / ps_um]) position_list_frame.append(position_list_time_point[0]) # Assuming single time point for now. # Define positions and position indicies used positions_used, position_indicies_used = [], [] for index, pos in enumerate(position_list_frame): for color in illumination_list_frame[index][0]['value']: if any([illumination_list_frame[index][0]['value'][color] > 0 for color in illumination_list_frame[index][0]['value']]): position_indicies_used.append(index) positions_used.append(pos) # Generate ROI for this blur vector blur_vector_roi = getPositionListBoundingBox(positions_used) # Append to list blur_vector_roi_list.append(blur_vector_roi) # Crop illumination list to values within the support used illumination_list.append([illumination_list_frame[index] for index in range(min(position_indicies_used), max(position_indicies_used) + 1)]) # Store corresponding positions position_list.append(positions_used) # Apply kernel scaling or compression if necessary if 'scale' in corrections: for index in range(len(position_list)): _positions = np.asarray(position_list[index]) for ax in range(yp.shape(_positions)[1]): _positions[:, ax] = ((_positions[:, ax] - yp.min(_positions[:, ax])) * corrections['scale'] + yp.min(_positions[:, ax])) position_list[index] = _positions.tolist() blur_vector_roi_list[index].shape = [corrections['scale'] * sh for sh in blur_vector_roi_list[index].shape] # Synthesize blur vectors blur_vector_list = [] for frame_index in range(len(dataset.frame_list)): # Generate blur vectors if use_phase_ramp: kernel_shape = [yp.fft.next_fast_len(max(sh, 1)) for sh in blur_vector_roi_list[frame_index].shape] offset = yp.cast([sh // 2 + st for (sh, st) in zip(kernel_shape, blur_vector_roi_list[frame_index].start)], 'complex32') # Create phase ramp and calculate offset R = ops.PhaseRamp(kernel_shape, dtype='complex32') # Generate blur vector blur_vector = yp.zeros(R.M) for pos, illum in zip(position_list[frame_index], illumination_list[frame_index]): blur_vector += (R * (yp.cast(pos, 'complex32') - offset)) # Take inverse Fourier Transform blur_vector = yp.abs(yp.cast(yp.iFt(blur_vector)), 0.0) else: blur_vector = yp.asarray([illum[0]['value']['w'] for illum in illumination_list[frame_index]], dtype=dtype, backend=backend) # Normalize illuminaiton vectors blur_vector /= yp.scalar(yp.sum(blur_vector)) # Append to list blur_vector_list.append(blur_vector) # Subtract mininum of frame_segment_map frame_segment_map = [segment - min(frame_segment_map) for segment in frame_segment_map] # Return return blur_vector_list, blur_vector_roi_list, frame_segment_map, position_list, illumination_list def blurKernelRecoveryFromStatic(blurred, static, solver='iterative', reg=None, iteration_count=10, system_otf=None, threshold=0.2): static_mean = np.mean(static) if static_mean > 1e-4: static = (static.copy() - static_mean) / static_mean blurred_mean = np.mean(blurred) if blurred_mean > 1e-4: blurred = (blurred.copy() - blurred_mean) / blurred_mean # if system_otf is not None: # static = iFt(Ft(static) * system_otf) if solver == 'iterative': A = ops.Convolution(blurred.shape, static, mode='windowed') y = blurred.reshape(-1).astype(np.complex64) # Initialization: choosing a "good" coefficient value will help in convergence initialization = np.ones(y.shape, y.dtype) # Define cost function objective = objectivefunctions.L2(A, y, l2_reg=reg) #, reg=5e-3) # Gradient descent implementation kernel_recovered = iterative.GradientDescent(objective).solve(initialization=initialization, step_size=1e-3, nesterov_enabled=True, iteration_count=iteration_count, display_type='text', display_iteration_delta=max((iteration_count // 10),1)) else: if reg is None: reg = 0 kernel_recovered = iFt((np.conj(Ft(static)) * Ft(blurred)) / (np.abs(Ft(static)) ** 2 + reg)) # Take real part kernel_recovered = np.real(kernel_recovered).reshape(static.shape) # Subtract low-frequency information kernel_recovered -= scipy.ndimage.filters.gaussian_filter(np.real(kernel_recovered.reshape(blurred.shape)), 10) # Filter by OTF support, threshold if system_otf is not None: kernel_recovered = np.real(iFt(Ft(kernel_recovered.reshape(blurred.shape)) * system_otf)) kernel_recovered *= (kernel_recovered > threshold * np.max(kernel_recovered)) return(kernel_recovered) def registerDatasetImages(dataset, roi=None): from comptic.registration import registerImage shift_list = [] image_list = [] for index in range(1, len(dataset.frame_list)): if roi is not None: shift_list.append(registerImage(dataset.frame_list[index - 1][roi.slice], dataset.frame_list[index][roi.slice])) image_list.append((dataset.frame_list[index - 1][roi.slice], dataset.frame_list[index][roi.slice])) else: shift_list.append(registerImage(dataset.frame_list[index - 1], dataset.frame_list[index])) print(shift_list) print("Registered image %d of %d, shift was (%d, %d) pixels" % (index, len(dataset.frame_list), shift_list[-1][0], shift_list[-1])) return(shift_list, image_list) def cropAndCenterKernel(kernel_recovered, kernel_size): # Center maximum value in blur kernel max_pos = np.unravel_index(np.argmax(kernel_recovered), kernel_recovered.shape) kernel_centered = np.roll(kernel_recovered, -np.asarray(max_pos) + np.asarray(kernel_recovered.shape) //2) # Crop to 2x blur kernel fov kernel_zeroed = np.zeros(kernel_centered.shape, dtype=kernel_centered.dtype) kernel_zeroed[kernel_centered.shape[0] // 2 - kernel_size[0]:kernel_centered.shape[0] // 2 + kernel_size[0], kernel_centered.shape[1] // 2 - kernel_size[1]:kernel_centered.shape[1] // 2 + kernel_size[1]] = \ kernel_centered[kernel_centered.shape[0] // 2 - kernel_size[0]:kernel_centered.shape[0] // 2 + kernel_size[0], kernel_centered.shape[1] // 2 - kernel_size[1]:kernel_centered.shape[1] // 2 + kernel_size[1]] # Center at middle of blur kernel p = np.where(kernel_zeroed > 0) kernel_centered = np.roll(kernel_zeroed, -np.round(np.asarray((np.mean(p[0]), np.mean(p[1]))) + np.asarray(kernel_zeroed.shape) // 2).astype(np.int)) kernel_size_small = kernel_size //2 # Zero everything outside a resonable shift range kernel_zeroed_crop = np.zeros(kernel_centered.shape, dtype=kernel_centered.dtype) kernel_zeroed_crop[kernel_centered.shape[0] // 2 - kernel_size_small[0]:kernel_centered.shape[0] // 2 + kernel_size_small[0], kernel_centered.shape[1] // 2 - kernel_size_small[1]:kernel_centered.shape[1] // 2 + kernel_size_small[1]] = \ kernel_centered[kernel_centered.shape[0] // 2 - kernel_size_small[0]:kernel_centered.shape[0] // 2 + kernel_size_small[0], kernel_centered.shape[1] // 2 - kernel_size_small[1]:kernel_centered.shape[1] // 2 + kernel_size_small[1]] return(kernel_zeroed_crop) def plotBlurKernelList(blur_kernel_list, max_count_to_show=5, measurement_list=None, figsize=None): """ Plots a list of blur kernels and (optionally) corresponding measurements """ count_to_show = min(max_count_to_show, len(blur_kernel_list)) if figsize is None: plt.figure(figsize=(count_to_show * 2.5, 4 * (1 + int(measurement_list is not None)))) else: plt.figure(figsize=figsize) for i in range(count_to_show): plt.subplot(1 + int(measurement_list is not None), count_to_show, i + 1) plt.imshow(blur_kernel_list[i], interpolation='bilinear') plt.title('Blur Kernel ' + str(i)) def illustrateMultiFrameKernel(blur_kernel_list, filename): """ Function which illustrates a multi-frame blur kernel and saves it to the disk""" image_c = np.zeros((blur_kernel_list[0].shape[0], blur_kernel_list[0].shape[1], 3)) color_list = ['r', 'g', 'c', 'm', 'w', 'y'] for index, blur_kernel in enumerate(blur_kernel_list): rgb = matplotlib.colors.to_rgb(color_list[index]) image_c[:, :, 0] += blur_kernel * rgb[0] image_c[:, :, 1] += blur_kernel * rgb[1] image_c[:, :, 2] += blur_kernel * rgb[2] image_c /= np.amax(image_c) plt.figure() plt.imshow(image_c, interpolation='bilinear') plt.xticks([], []) plt.yticks([], []) plt.tight_layout() plt.savefig(filename, transparent=True) def genSamplingComb(object_size, image_size, dtype=np.complex64): """ Generates a comb function corresponding with seperation defined by image_size, centered at the center of object_size """ sampling = np.floor(((np.asarray(object_size) / 2) / np.asarray(image_size))) sampling_comb = np.zeros(object_size, dtype=dtype) yy, xx = np.meshgrid(np.arange(-sampling[0], sampling[0] + 1), np.arange(-sampling[1], sampling[1] + 1)) positions_0 = np.hstack((yy.ravel()[:, np.newaxis], xx.ravel()[:, np.newaxis])).astype(np.int) positions = np.zeros(positions_0.shape, dtype=positions_0.dtype) positions[:, 0] = object_size[0] // 2 + positions_0[:, 0] * image_size[0] positions[:, 1] = object_size[1] // 2 + positions_0[:, 1] * image_size[1] for position in positions: sampling_comb[position[0], position[1]] = 1 positions -= np.asarray(object_size) // 2 return((sampling_comb, positions)) def genConvolutionSupportList(blur_kernel_list, image_size, threshold=0.05): """ This function generates a list of images defining the support of a windowed convolution operation. """ object_size = blur_kernel_list[0].shape W = ops.Crop(object_size, image_size) kernel_support_mask = [] object_support_mask = [] print(W.dtype) window_mask = np.abs(W.H * W * np.ones(W.shape[1], dtype=np.complex64)).reshape(object_size) for blur_kernel in blur_kernel_list: C = ops.Convolution((blur_kernel > threshold).astype(np.complex64), mode='windowed', pad_value=0, pad_size=int(object_size[0] / 2)) kernel_support_mask += [((C * (window_mask.reshape(-1).astype(np.complex64))).reshape(object_size) > threshold)] object_support_mask.append(kernel_support_mask[-1]) for dim in range(kernel_support_mask[-1].ndim): object_support_mask[-1] = np.flip(object_support_mask[-1], dim) return (kernel_support_mask, object_support_mask) def blurKernelFromPositions(object_size, position_list, illum_list, flip_kernels=False, use_phase_ramp=False, pos_perturbation=None, dtype=default_dtype, backend=default_backend): """ This function generates a single blur kernel from a list of positions and illuminations. not multiframe. """ # Initialize blur kernels blur_kernel = np.zeros(object_size, dtype=np.complex64) for position_index, position in enumerate(position_list): y = position[0] x = position[1] if pos_perturbation is not None: y = y + pos_perturbation[position_index, 0] x = x + pos_perturbation[position_index, 1] if not use_phase_ramp: x = int(round(x)) y = int(round(y)) # Assign illumination values if illum_list[position_index] > 0: if not use_phase_ramp: blur_kernel[y, x] += illum_list[position_index] else: R = ops.PhaseRamp(blur_kernel.shape, dtype=dtype, backend=backend) x_ = yp.astype(np.asarray((y - object_size[0] // 2, x - object_size[1] // 2)), R.dtype) ramp = yp.reshape(R * x_, blur_kernel.shape) blur_kernel += (ramp * illum_list[position_index]) if use_phase_ramp: blur_kernel = iFt(blur_kernel) blur_kernel[blur_kernel < 1e-8] = 0.0 if flip_kernels: blur_kernel = np.fliplr(blur_kernel) if np.sum(blur_kernel) > 0: blur_kernel /= np.sum(blur_kernel) return blur_kernel def positionListToBlurKernelMap(kernel_size, position_list, return_fourier=True): """Function which converts a list of positions in a blur kernel to a full (non-sparse) blur kernel map. Args: kernel_size: Size of first two dimensions in blur_kernel_map position_list: List of x,y tuples which are the locaitons of each position in the blur kernel. return_fourier: Optional, enables return of blur kernels in frequency (Fourier) domain. Returns: A 2D blur_kernel_map, which has dimensions (kernel_size[0], kernel_size[1], size(position_list,1)) """ # TODO redundant print("can this be replaced with blurKernelFromPositions?") n_positions = np.size(position_list, 0) blur_kernel_map = np.zeros((n_positions, kernel_size[0], kernel_size[1])) for pos in np.arange(0, n_positions): blur_kernel_map[pos, position_list[pos, 0], position_list[pos, 1]] = 1 if return_fourier: blur_kernel_map = Ft(blur_kernel_map.astype(np.complex64)) return(blur_kernel_map) def pointListToBlurKernel(kernel_size, position_list, illumination_vector): """Converts point list and illuminaiton vector to blur kernel""" # TODO redundant print("can this be replaced with blurKernelFromPositions?") position_count = np.size(position_list, 0) blur_kernel = np.zeros((kernel_size[0], kernel_size[1])) assert position_count == len(illumination_vector) for index, position in enumerate(position_list): blur_kernel[position[0], position[1]] = illumination_vector[index] return(blur_kernel) def colorBlurKernelsToMonochrome(blur_kernel_list_color): """ This function converts a list of color blur kernels to monochrome, assuming no optical effects. Args: blur_kernel_list_color: A dictionary of blur kernel lists, where each key indicates the illumination color channel of that kernel. Returns: A list of blur kernels which is the sum of the lists of each key in blur_kernel_list_color """ blur_kernel_list = [] for index, blur_kernel in enumerate(blur_kernel_list_color): first_channel = list(blur_kernel.keys())[0] new_kernel = np.zeros(blur_kernel[first_channel].shape, dtype=blur_kernel[first_channel].dtype) for channel in blur_kernel: new_kernel += blur_kernel[channel] blur_kernel_list.append(new_kernel) return(blur_kernel_list) def getPositionListBoundingBox(kernel_position_list, use_mean=False): """ This function returns the bounding box of a single blur kernel or list of blur kernels, defined as a list of positions Args: kernel_position_list: list of points (y,x) Returns: A list of the extreme values in the blur kernel in the format [y_min, y_max, x_min, x_max] """ bounding_box = [1e10, -1e10, 1e10, -1e10] assert type(kernel_position_list) in [list, np.ndarray] # Make a single kernel_position_list a list with one element if type(kernel_position_list[0][0]) not in [list, np.ndarray, tuple]: kernel_position_list = [kernel_position_list] for position in kernel_position_list: if type(position[0][0]) in [np.ndarray, list, tuple]: # TODO: This will break if we blur by more than one pixel during each pixel motion if not use_mean: max_y, max_x = np.max(np.asarray(position), axis=0)[0] min_y, min_x = np.min(np.asarray(position), axis=0)[0] else: mean_y, mean_x = np.mean(np.asarray(position), axis=0)[0] else: if not use_mean: max_y, max_x = np.max(np.asarray(position), axis=0) min_y, min_x = np.min(np.asarray(position), axis=0) else: mean_y, mean_x = np.mean(np.asarray(position), axis=0) if not use_mean: bounding_box = [min(min_y, bounding_box[0]), max(max_y, bounding_box[1]), min(min_x, bounding_box[2]), max(max_x, bounding_box[3])] else: bounding_box = [min(mean_y, bounding_box[0]), max(mean_y, bounding_box[1]), min(mean_x, bounding_box[2]), max(mean_x, bounding_box[3])] # Create ROI object kernel_support_roi = yp.Roi(start=(int(round(bounding_box[0])), int(round(bounding_box[2]))), end=(int(round(bounding_box[1])), int(round(bounding_box[3])))) return(kernel_support_roi) ###################################################################################################### ##################################### AUTOCALIBRATION ################################################ ###################################################################################################### class BsplineND(): # from http://pythology.blogspot.com/2017/07/nd-b-spline-basis-functions-with-scipy.html def __init__(self, knots, degree=3, periodic=False): """ :param knots: a list of the spline knots with ndim = len(knots) TODO (sarah) incorporate 2d aspect? """ self.ndim = len(knots) self.splines = [] self.knots = knots self.degree = degree for idim, knots1d in enumerate(knots): nknots1d = len(knots1d) y_dummy = np.zeros(nknots1d) knots1d, coeffs, degree = sp.interpolate.splrep(knots1d, y_dummy, k=degree, per=periodic) self.splines.append((knots1d, coeffs, degree)) self.ncoeffs = [len(coeffs) for knots, coeffs, degree in self.splines] def evaluate_independent(self, position): """ :param position: a numpy array with size [ndim, npoints] :returns: a numpy array with size [nspl1, nspl2, ..., nsplN, npts] with the spline basis evaluated at the input points """ ndim, npts = position.shape values_shape = self.ncoeffs + [npts] values = np.empty(values_shape) ranges = [range(icoeffs) for icoeffs in self.ncoeffs] for icoeffs in itertools.product(*ranges): values_dim = np.empty((ndim, npts)) for idim, icoeff in enumerate(icoeffs): coeffs = [1.0 if ispl == icoeff else 0.0 for ispl in range(self.ncoeffs[idim])] values_dim[idim] = sp.interpolate.splev( position[idim], (self.splines[idim][0], coeffs, self.degree)) values[icoeffs] = np.product(values_dim, axis=0) return values def evaluate(self, position): assert self.weights is not None, "Must specify coefficients with set_coeffs()" values = self.evaluate_independent(position) return self.weights.dot(values) def set_weights(self, weights): assert len(weights) == self.ncoeffs[0], "must input correct number of weights" self.weights = weights def get_basis_splines(extent, num_basis_fn): knotsx = np.linspace(0,extent-1,num_basis_fn) bspline = BsplineND([knotsx]) pointsx1d = np.linspace(knotsx[0], knotsx[-1], extent) basis_matrix = bspline.evaluate_independent(pointsx1d[None, :]) return basis_matrix[:num_basis_fn].T def constructAlternatingMin(illuminations, shifts, image_size, n_frames, y): assert False, "DEPRECIATED, try getAutocalibrationFns" def positions_to_splines(spl_basis, pos): # TODO (sarah) can be implemented as matrix inversion return np.linalg.pinv(spl_basis.T.dot(spl_basis)).dot(spl_basis.T.dot(pos)) # def gradw(w): # return spl_basis.T.dot( pos - spl_basis.dot(w)) # for i in range(100): # w = w + 0.1 * gradw(w) # return w def get_monotone_projection(spline_basis): A = spline_basis[:-1] - spline_basis[1:] return lambda x: project_inequality(A, x) def project_inequality(A, x): # projection onto Ax <= 0 # TODO assumes A is real # TODO check that this is actually working: seems that resulting x is in full A nullspace... # assert len(x.shape==2) A_active = A[np.where(A.dot(x) > 0)[0]] if A_active.shape[0] == 0: return x if len(A_active.shape) < 2: A_active = np.expand_dims(A_active,1) AAinv = np.linalg.pinv(A_active.dot(A_active.T)) P = A_active.T.dot(AAinv).dot(A_active) Px = P.dot(x) return x - Px def getAutocalibrationFns(y, object_size, illums, basis_y, basis_x, weights_initial, object_initial, dtype=None, backend=None, verbose=False): if verbose: print("generating BlurKernelBasis operator") Hsum = ops.BlurKernelBasis(object_size, (basis_y, basis_x), illums, dtype=dtype, backend=backend, verbose=verbose) F = ops.FourierTransform(object_size, dtype=dtype, backend=backend, normalize=False) if verbose: print("defining diagonalized components") D_weights = ops.Diagonalize((Hsum * weights_initial).reshape(object_size), \ label='D_{shift}', dtype=dtype, backend=backend) # TODO (sarah) use windowing here D_object = ops.Diagonalize(F * object_initial, \ label='D_{object}', dtype=dtype, backend=backend) # Forward models if verbose: print("defining forward models") A_object = F.H * D_weights * F A_weights = F.H * D_object * Hsum # Objectives if verbose: print("defining objectives") L2 = ops.L2Norm(object_size, dtype=dtype, backend=backend) objective_object = L2 * (A_object - y) objective_weights = L2 * (A_weights - y) np_dtype = yp.getNativeDatatype(F.dtype, F.backend) objective_object_set_weights = lambda weights: objective_object.setArgument('D_{shift}', \ Hsum * np.asarray(weights).astype(np_dtype)) objective_weights_set_object = lambda object_update: objective_weights.setArgument('D_{object}', \ F * np.asarray(object_update).astype(np_dtype)) objectives = [objective_object, objective_weights] update_fns = [objective_object_set_weights, objective_weights_set_object] return objectives, update_fns def tand(x): return np.float(np.tan(x * np.pi / 180)) def sind(x): return np.float(np.sin(x * np.pi / 180)) def cosd(x): return np.float(np.cos(x * np.pi / 180)) def dnf2snr(dnf, exposureUnits, exposureCountsPerUnit=6553, darkCurrentE=0.9, patternNoiseE=3.9, readoutNoiseE=2.5, cameraBits=16, fullWellCapacity=30000): """Function which converts deconvolution noise factor to signal to noise ratio. Uses equations from https://www.photometrics.com/resources/learningzone/signaltonoiseratio.php and the dnf from the Agrawal and Raskar 2009 CVPR paper found here: http://ieeexplore.ieee.org/document/5206546/ Default values are for the PCO.edge 5.5 sCMOS camera (https://www.pco.de/fileadmin/user_upload/pco-product_sheets/pco.edge_55_data_sheet.pdf) Args: dnf: Deconvolution noise factor as specified in Agrawal et. al. exposureUnits: exposure time, time units (normally ms) exposureCountsPerUnit: Average number of raw image counts for a 1 unit of exposureUnits exposure time darkCurrentE: Dark current from datasheet, units electrons patternNoiseE: Pattern noise from datasheet, units electrons readoutNoiseE: Readout noise from datasheet, units electrons cameraBits: Number of bits in camera Returns: A 2D numpy array which indicates the support of the optical system in the frequency domain. """ countsToE = fullWellCapacity / (2 ** cameraBits - 1) return countsToE * exposureUnits * exposureCountsPerUnit \ / (dnf * math.sqrt((countsToE * exposureCountsPerUnit + readoutNoiseE) * exposureUnits + (darkCurrentE + patternNoiseE))) def genRandInitialization(n, beta, bounds=[0.0, 1.0], remainder=False): blurVec = np.zeros(n) # # Make a random assortment of columns 1 # randSeed = (np.random.rand(n) * [bounds[1] - bounds[0]]) - bounds[0] # randSort = np.argsort(randSeed) # mask = randSort <= np.floor(beta * n) n_pulses = int(np.floor(beta * n)) mask = np.random.choice(n, size=n_pulses, replace=False) # # Set these values to max blurVec[mask] = bounds[1] # # Assign the remainder to a value which is zero if remainder: zeroIdx = np.argsort(blurVec) blurVec[zeroIdx[0]] = (beta * n) % 1 # Compute Condition Number condNum = max(abs(fftpack.fft(mask))) / min(abs(fftpack.fft(mask))) return blurVec, condNum def condLowerBound(N, beta, bounds=[0, 1]): """Function which generates a lower bound on condition number using the PSD description of the optimal solution. Args: N: Number of positions on blur kernel beta: throughoput coefficient in range [0,1] bounds: bounds of resulting kernel, usually set to [0,1] Returns: Scalar condition number lower bound """ # Theoretical maximum bound on sum(x^2) ps_max = np.floor(N * beta) + np.mod(N * beta, 1) ** 2 # Convert power spectrum to frequency domain power specturm using Parseval's theorem ps_f = ps_max * N # This is the DC term in real space dc = N * beta # Compute mininum value of power spectra using parseval's theorem and the DC minPs = (ps_f - dc ** 2) / (N - 1) # Compute Condition Number kappa = dc / np.sqrt(minPs) return kappa def dnfUpperBound(N, beta, bounds=[0, 1]): """Function which generates a upper bound on deconvolution noise factor (DNF) using the PSD description of the optimal solution. DNF is described in the Agrawal and Raskar 2009 CVPR paper found here: http://ieeexplore.ieee.org/document/5206546/ Args: N: Number of positions on blur kernel beta: throughoput coefficient in range [0,1] bounds: bounds of resulting kernel, usually set to [0,1] Returns: Scalar dnf lower bound """ # Theoretical maximum bound on sum(x^2) ps_max = np.floor(N * beta) + np.mod(N * beta, 1) ** 2 # Convert power spectrum to frequency domain power specturm using Parseval's theorem ps_f = ps_max * N # This is the DC term in real space dc = N * beta # Compute mininum value of power spectra using parseval's theorem and the DC if N > 1: minPs = (ps_f - dc ** 2) / (N - 1) # Compute DNF dnf = (N - 1) * 1 / np.sqrt(minPs) + 1 / (dc) else: dnf = 1 return dnf def genKernelMapCol(colIdx, innerKernelMap, outerKernelMap, kernelSupport=None, supportThreshold=-1): """Function which generates a single column in a kernel map from an inner and outer base kernelMap. Args: innerKernelMap: kernelMap to pattern on inner dimension, as in the minor stride in the final kernel. Should be of same (x,y) size as outerKernelMap (2nd and 3rd dim) outerKernelMap: kernelMap to pattern on inner dimension, as in the major stride in the final kernel. Should be of same (x,y) size as innerKernelMap (2nd and 3rd dim) kernelSupport: Binary array for 2D support in both inner and outer kernelMaps supportThreshold: A threshold for the final kernelMap magnitude. Only used if kernelSupport = None (default) Returns: A 1D column from the kernelMap formed by innerKernelMap and outerKernelMap. Size in the first dimension will be the product of the first two dimensions in both innerKernelMap and outerKernelMap by default, or can be less if kernelSupport or supportThreshold are passed. """ innerSize = np.size(innerKernelMap, 2) outerSize = np.size(outerKernelMap, 2) assert colIdx < innerSize * outerSize, "colIdx should be less than the product of the third dimensions in innerKernelMap and outerKernelMap" innerIdx = int(colIdx % innerSize) outerIdx = int(np.floor(colIdx / innerSize)) kernelMapCol = (innerKernelMap[:, :, innerIdx] * outerKernelMap[:, :, outerIdx]).reshape(-1) if (np.any(kernelSupport) == None): if supportThreshold > 0: support = np.abs(kernelMapCol) > supportThreshold else: support = ones(innerKernelMap[:, :, 0].reshape(-1).shape) else: support = kernelSupport kernelMapCol = kernelMapCol[support.reshape(-1) > 0] return kernelMapCol def genKernelMapSupport(innerKernelMap, outerKernelMap, supportThreshold=-1): """Function which generates a 2D support plot given both inner and outer kernelMaps. Args: innerKernelMap: kernelMap to pattern on inner dimension, as in the minor stride in the final kernel. Should be of same (x,y) size as outerKernelMap (2nd and 3rd dim) outerKernelMap: kernelMap to pattern on inner dimension, as in the major stride in the final kernel. Should be of same (x,y) size as innerKernelMap (2nd and 3rd dim) supportThreshold: A threshold for the final kernelMap magnitude. Returns: A 2D complete kernelMap with size equal to the first two dimensions in innerKernelMap and outerKernelMap. This is a binary array which indicates whether the magnitude of all combinations of inner and outerKernelMap will be greater than the supportThreshold at every position. By default, returns an array which is all True, unless supportThreshold is passed. """ return (np.sum(np.abs(innerKernelMap), 2) / np.mean(np.sum(np.abs(innerKernelMap), 2)) * np.sum(np.abs(outerKernelMap)) / np.mean(np.sum(np.abs(outerKernelMap)))) > supportThreshold def genKernelMap(innerKernelMap, outerKernelMap, kernelSupport=None, supportThreshold=-1): """Function which generates an kernel map from an inner and outer base kernelMap. Args: innerKernelMap: kernelMap to pattern on inner dimension, as in the minor stride in the final kernel. Should be of same (x,y) size as outerKernelMap (2nd and 3rd dim) outerKernelMap: kernelMap to pattern on inner dimension, as in the major stride in the final kernel. Should be of same (x,y) size as innerKernelMap (2nd and 3rd dim) kernelSupport: Binary array for 2D support in both inner and outer kernelMaps supportThreshold: A threshold for the final kernelMap magnitude. Only used if kernelSupport = None (default) Returns: A 2D complete kernelMap with second dimension equal to the product of the last dimensions in innerKernelMap and outerKernelMap. Size in the first dimension will be the product of the first two dimensions in both innerKernelMap and outerKernelMap by default, or can be less if kernelSupport or supportThreshold are passed. """ # Number of columns to build if type(outerKernelMap) is type(None): outerKernelMap = np.ones((np.size(innerKernelMap, 0), np.size(innerKernelMap, 1), 1)) if np.ndim(innerKernelMap) == 2: innerKernelMap = np.expand_dims(innerKernelMap, 2) if np.ndim(outerKernelMap) == 2: outerKernelMap = np.expand_dims(outerKernelMap, 2) outerSize = np.size(outerKernelMap, 2) innerSize = np.size(innerKernelMap, 2) nColumns = innerSize * outerSize # Generate support based on power spectra of each kernel if (kernelSupport) == None: if supportThreshold > 0: support = genKernelMapSupport(innerKernelMap, outerKernelMap, supportThreshold=supportThreshold) else: support = np.ones(innerKernelMap[:, :, 0].reshape(-1).shape) else: support = kernelSupport kernelMap = np.zeros((np.sum(support > 0), nColumns), dtype=np.complex64) for colIdx in np.arange(0, innerSize * outerSize): kernelMap[:, colIdx] = genKernelMapCol(colIdx, innerKernelMap, outerKernelMap, kernelSupport=support) return(kernelMap) ###################################################################################################### ##################################### PATHWAY GENERATION ############################################# ###################################################################################################### def genMotionPathIncrimentPlot(blur_kernel_map): """Function which generates a 2D kernel map for illustration where every sequential position is it's index in blur_kernel_map Args: blur_kernel_map: A blur kernel map, usually a bunch of delta functions. Should be a 3D ndarray Returns: A 2D ndarray where each value is it's index in the input blur_kernel_map """ kernel_map_full = np.zeros((np.size(blur_kernel_map, 0), np.size(blur_kernel_map, 1))) for idx in np.arange(np.size(blur_kernel_map, 2)): kernel_map_full = kernel_map_full + blur_kernel_map[:, :, idx] * idx return kernel_map_full def genRasterMotionPathwayOld(object_size, image_size, full_object_multi_pass=0, measurement_redundancy=1): """Function which generates a list of points which make up a complete raster scan of a given FOV, given a small capture FOV Args: image_size: Capture frame size in (y,x) object_size: Sample size in (y,x), should be larger than image_size full_object_multi_pass: (0) Flag to force kernel generation to scan full object multiple times instead of dividing it into segments. If between 0 and 1, scans the object in halves. measurement_redundancy: redundancy in x, increases number of measurements by this factor Returns: A 2D ndarray where each value is it's index in the input blur_kernel_map """ # Determine major axis major_axis = np.argmax(np.asarray(object_size)) if object_size[0] == object_size[1]: major_axis = 1 if major_axis == 0: object_size = np.flip(object_size, 0) image_size = np.flip(image_size, 0) measurement_count = np.ceil(np.asarray(object_size) / np.asarray(image_size) ).astype(np.int) # two components in x and y assert np.any(measurement_count > 1), "image_size must be smaller than object_size!" print("Image size requires %d x %d images" % (measurement_count[0], measurement_count[1])) measurement_count[1] = int(measurement_redundancy * measurement_count[1]) raster_segments = np.zeros((measurement_count[0] * 2, 2), dtype=np.int) y_stride = object_size[0] / measurement_count[0] x_stride = object_size[1] / measurement_count[1] minor_stride_side = 'r' raster_point_list = [] for row in np.arange(measurement_count[0]): # Place the vertical upright if minor_stride_side == 'r': raster_segments[(2 * row), :] = [np.ceil(image_size[0] * (row + 0.5)).astype(int), np.ceil(image_size[1] * 0.5).astype(int)] raster_segments[(2 * row) + 1, :] = [np.ceil(image_size[0] * (row + 0.5)).astype(int), np.ceil(object_size[1] - image_size[1] * 0.5).astype(int)] minor_stride_side = 'l' else: raster_segments[(2 * row), :] = [np.ceil(image_size[0] * (row + 0.5)).astype(int), np.ceil(object_size[1] - image_size[1] * 0.5).astype(int)] raster_segments[(2 * row) + 1, :] = [np.ceil(image_size[0] * (row + 0.5) ).astype(int), np.ceil(image_size[1] * 0.5).astype(int)] minor_stride_side = 'r' # Determine movement direction of this row in X if raster_segments[(2 * row), 1] < raster_segments[(2 * row) + 1, 1]: move_direction_x = 1 else: move_direction_x = -1 # always move down one move_direction_y = 1 # Determine points to use for horizontal scan if row == 0: if measurement_count[0] == 1: x_position_list = np.arange(0, object_size[1], move_direction_x) else: x_position_list = np.arange(0, raster_segments[(2 * row) + 1, 1], move_direction_x) elif row == measurement_count[0] - 1: x_position_list = np.arange(raster_segments[(2 * row), 1], object_size[1], move_direction_x) else: x_position_list = np.arange(raster_segments[(2 * row), 1], raster_segments[(2 * row) + 1, 1], move_direction_x) for position_x in x_position_list: raster_point_list.append([raster_segments[(2 * row), 0], position_x]) # Vertical scan if np.ceil(image_size[0] * (row + 1.5)) < object_size[0]: for position_y in np.arange(np.ceil(image_size[0] * (row + 0.5)), np.ceil(image_size[0] * (row + 1.5))).astype(int): raster_point_list.append([position_y.astype(int), raster_segments[(2 * row) + 1, 1]]) raster_point_list = np.asarray(raster_point_list) # Determine number of points per image points_per_image = np.floor(raster_point_list.shape[0] / np.prod(measurement_count)) measurement_indicies = np.arange(raster_point_list.shape[0]) measurement_indicies = np.floor(measurement_indicies / points_per_image) # If full_object_multi_pass flag is specified, we want to scan the object backwards # and forwards multiple times instead of dividing it up into segments. raster_point_list_segmented = [] for measurement_index in range(np.prod(measurement_count)): if not full_object_multi_pass: raster_point_list_segmented.append(raster_point_list[measurement_indicies == measurement_index, :]) elif full_object_multi_pass < 1: midpoint = int(np.ceil(raster_point_list.shape[0] / 2)) if measurement_index % 2: if measurement_index % 3: raster_point_list_segmented.append(raster_point_list[midpoint:, :]) else: raster_point_list_segmented.append(np.flip(raster_point_list[0:midpoint, :], axis=0)) else: if measurement_index % 4: raster_point_list_segmented.append(np.flip(raster_point_list[midpoint:, :], axis=0)) else: raster_point_list_segmented.append(raster_point_list[0:midpoint, :]) else: if measurement_index % 2: raster_point_list_segmented.append(raster_point_list) else: raster_point_list_segmented.append(np.flip(raster_point_list, axis=0)) # Transpose points if user desires if major_axis == 0: return(np.flip(raster_point_list_segmented, axis=2)) else: return(raster_point_list_segmented) def gen90Corner(image_size, orientation='ru'): position_list = [] for x_position in np.arange(0, np.ceil(image_size[1] * 0.5).astype(int)): position_list.append([np.ceil(image_size[0] * 0.5).astype(int), x_position]) for y_position in np.arange(np.ceil(image_size[0] * 0.5).astype(int), image_size[0]): position_list.append([y_position, np.ceil(image_size[1] * 0.5).astype(int)]) if orientation == 'rl': return flip_pts(position_list, image_size, ['ud', 'reverse']) elif orientation == 'lu': return flip_pts(position_list, image_size, ['lr']) elif orientation == 'll': return flip_pts(position_list, image_size, ['lr', 'ud', 'reverse']) else: return position_list def genRasterMotionPathway(object_size, image_size, corner_gen_fn=gen90Corner, full_object_multi_pass=0, measurement_redundancy=1): """Function which generates a list of points which make up a complete raster scan of a given FOV, given a small capture FOV Args: image_size: Capture frame size in (y,x) object_size: Sample size in (y,x), should be larger than image_size corner_gen_fn: function that generates corner shapes with given image size, offset, and orientation full_object_multi_pass: (0) Flag to force kernel generation to scan full object multiple times instead of dividing it into segments. If between 0 and 1, scans the object in halves. measurement_redundancy: redundancy in x, increases number of measurements by this factor Returns: A 2D ndarray where each value is it's index in the input blur_kernel_map """ # Determine major axis major_axis = np.argmax(np.asarray(object_size)) if object_size[0] == object_size[1]: major_axis = 1 if major_axis == 0: object_size = np.flip(object_size, 0) image_size = np.flip(image_size, 0) measurement_count = np.ceil(np.asarray(object_size) / np.asarray(image_size) ).astype(np.int) # two components in x and y assert np.any(measurement_count > 1), "image_size must be smaller than object_size!" print("Image size requires %d x %d images" % (measurement_count[0], measurement_count[1])) measurement_count[1] = int(measurement_redundancy * measurement_count[1]) raster_segments = np.zeros((measurement_count[0] * 2, 2), dtype=np.int) y_stride = object_size[0] / measurement_count[0] x_stride = object_size[1] / measurement_count[1] minor_stride_side = 'r' raster_point_list = [] for row in np.arange(measurement_count[0]): if row == 0: if measurement_count[0] == 1: # if final row # straight line only x_position_list = np.arange(0, object_size[1]) y_position = np.ceil(image_size[0] * 0.5).astype(int) for position_x in x_position_list: raster_point_list.append([y_position, position_x]) else: # straight line x_position_list = np.arange(0, object_size[1] - image_size[1]) y_position = np.ceil(image_size[0] * 0.5).astype(int) for position_x in x_position_list: raster_point_list.append([y_position, position_x]) # plus corner for position_x, position_y in corner_gen_fn(image_size, orientation='ru'): raster_point_list.append([position_y, position_x + object_size[1] - image_size[1]]) elif row % 2: # odd for position_x, position_y in corner_gen_fn(image_size, orientation='rl'): raster_point_list.append([position_y + row * image_size[0], position_x + object_size[1] - image_size[1]]) if measurement_count[0] == row + 1: # final row: straight line x_position_list = np.arange(0, object_size[1] - image_size[1], -1) y_position = np.ceil(image_size[0] * 0.5 + row * image_size[0]).astype(int) for position_x in x_position_list: raster_point_list.append([y_position, position_x]) else: # straight portion x_position_list = np.arange(image_size[1], object_size[1] - image_size[1], -1) y_position = np.ceil(image_size[0] * 0.5 + row * image_size[0]).astype(int) for position_x in x_position_list: raster_point_list.append([y_position, position_x]) # corner for position_x, position_y in corner_gen_fn(image_size, orientation='lu'): raster_point_list.append([position_y + row * image_size[0], position_x]) else: # even for position_x, position_y in corner_gen_fn(image_size, orientation='ll'): raster_point_list.append([position_y + row * image_size[0], position_x]) if measurement_count[0] == row + 1: # final row: straight line x_position_list = np.arange(image_size[1], object_size[1]) y_position = np.ceil(image_size[0] * 0.5 + row * image_size[0]).astype(int) for position_x in x_position_list: raster_point_list.append([y_position, position_x]) else: # straight portion x_position_list = np.arange(image_size[1], object_size[1] - image_size[1]) y_position = np.ceil(image_size[0] * 0.5 + row * image_size[0]).astype(int) for position_x in x_position_list: raster_point_list.append([y_position, position_x]) # corner for position_x, position_y in corner_gen_fn(image_size, orientation='ru'): raster_point_list.append([position_y + row * image_size[0], position_x + object_size[1] - image_size[1]]) raster_point_list = np.asarray(raster_point_list) # Determine number of points per image points_per_image = np.floor(raster_point_list.shape[0] / np.prod(measurement_count)) measurement_indicies = np.arange(raster_point_list.shape[0]) measurement_indicies = np.floor(measurement_indicies / points_per_image) # If full_object_multi_pass flag is specified, we want to scan the object backwards # and forwards multiple times instead of dividing it up into segments. raster_point_list_segmented = [] for measurement_index in range(np.prod(measurement_count)): if not full_object_multi_pass: raster_point_list_segmented.append(raster_point_list[measurement_indicies == measurement_index, :]) elif full_object_multi_pass < 1: midpoint = int(np.ceil(raster_point_list.shape[0] / 2)) if measurement_index % 2: if measurement_index % 3: raster_point_list_segmented.append(raster_point_list[midpoint:, :]) else: raster_point_list_segmented.append(np.flip(raster_point_list[0:midpoint, :], axis=0)) else: if measurement_index % 4: raster_point_list_segmented.append(np.flip(raster_point_list[midpoint:, :], axis=0)) else: raster_point_list_segmented.append(raster_point_list[0:midpoint, :]) else: if measurement_index % 2: raster_point_list_segmented.append(raster_point_list) else: raster_point_list_segmented.append(np.flip(raster_point_list, axis=0)) # Transpose points if user desires if major_axis == 0: return(np.flip(raster_point_list_segmented, axis=2)) else: return(raster_point_list_segmented) def flip_pts(points, image_size, orientations): new_points = points for orientation in orientations: if orientation == 'reverse': new_points = np.flipud(new_points) else: if orientation == 'ud': def point_op(point): return (point[0], image_size[0] - point[1]) elif orientation == 'lr': def point_op(point): return (image_size[1] - point[0], point[1]) else: assert 0, 'unrecognized orientation' new_points = [point_op(point) for point in new_points] return new_points # messy separate version for now, eventually merge custom corner logic with everything else to subsume this case def genLinearRasterMotionPathway(object_size, image_size, full_object_multi_pass=0, measurement_redundancy=1): """Function which generates a list of points which make up a complete raster scan of a given FOV, given a small capture FOV Args: image_size: Capture frame size in (y,x) object_size: Sample size in (y,x), should be larger than image_size full_object_multi_pass: (0) Flag to force kernel generation to scan full object multiple times instead of dividing it into segments. If between 0 and 1, scans the object in halves. measurement_redundancy: redundancy in x, increases number of measurements by this factor Returns: A 2D ndarray where each value is it's index in the input blur_kernel_map """ # Determine major axis major_axis = np.argmax(np.asarray(object_size)) if object_size[0] == object_size[1]: major_axis = 1 if major_axis == 0: object_size = np.flip(object_size, 0) image_size = np.flip(image_size, 0) measurement_count = np.ceil(object_size / image_size).astype(np.int) # two components in x and y assert np.any(measurement_count > 1), "image_size must be smaller than object_size!" print("Image size requires %d x %d images" % (measurement_count[0], measurement_count[1])) measurement_count[1] = int(measurement_redundancy * measurement_count[1]) raster_segments = np.zeros((measurement_count[0] * 2, 2), dtype=np.int) y_stride = object_size[0] / measurement_count[0] x_stride = object_size[1] / measurement_count[1] raster_point_list = [] for row in np.arange(measurement_count[0]): # Place the vertical upright raster_segments[(2 * row), :] = [np.ceil(image_size[0] * (row + 0.5)).astype(int), np.ceil(image_size[1] * 0.5).astype(int)] raster_segments[(2 * row) + 1, :] = [np.ceil(image_size[0] * (row + 0.5)).astype(int), np.ceil(object_size[1] - image_size[1] * 0.5).astype(int)] # Determine points to use for horizontal scan x_position_list = np.arange(0, object_size[1], 1) for position_x in x_position_list: raster_point_list.append([raster_segments[(2 * row), 0], position_x]) raster_point_list = np.asarray(raster_point_list) # Determine number of points per image points_per_image = np.floor(raster_point_list.shape[0] / np.prod(measurement_count)) measurement_indicies = np.arange(raster_point_list.shape[0]) measurement_indicies = np.floor(measurement_indicies / points_per_image) # If full_object_multi_pass flag is specified, we want to scan the object backwards # and forwards multiple times instead of dividing it up into segments. raster_point_list_segmented = [] for measurement_index in range(np.prod(measurement_count)): if not full_object_multi_pass: raster_point_list_segmented.append(raster_point_list[measurement_indicies == measurement_index, :]) elif full_object_multi_pass < 1: midpoint = int(np.ceil(raster_point_list.shape[0] / 2)) if measurement_index % 2: if measurement_index % 3: raster_point_list_segmented.append(raster_point_list[midpoint:, :]) else: raster_point_list_segmented.append(np.flip(raster_point_list[0:midpoint, :], axis=0)) else: if measurement_index % 4: raster_point_list_segmented.append(np.flip(raster_point_list[midpoint:, :], axis=0)) else: raster_point_list_segmented.append(raster_point_list[0:midpoint, :]) else: if measurement_index % 2: raster_point_list_segmented.append(raster_point_list) else: raster_point_list_segmented.append(np.flip(raster_point_list, axis=0)) # Transpose points if user desires if major_axis == 0: return(np.flip(raster_point_list_segmented, axis=2)) else: return(raster_point_list_segmented) def genCustomRasterPathway(image_size, object_size, corner_fn, measurement_redundancy=1): # very rough function, to be improved later assert (object_size / image_size == [3, 3]).all(), 'only design for 3x3 grid' line_list = [] line = genTwoPointLineBlurposition_list((0, int(image_size[0] / 2)), (image_size[1], int(image_size[0] / 2))) line_list.append(line) line = genTwoPointLineBlurposition_list( (image_size[1], int(image_size[0] / 2)), (2 * image_size[1], int(image_size[0] / 2))) line_list.append(line) line = corner_fn(image_size, offset=(2 * image_size[1], 0)) line_list.append(line) line = corner_fn(image_size, offset=(2 * image_size[1], image_size[0]), orientations=['ud', 'reverse']) line_list.append(line) line = genTwoPointLineBlurposition_list( (2 * image_size[0], image_size[1] + int(image_size[1] / 2)), (image_size[0], image_size[1] + int(image_size[1] / 2))) line_list.append(line) line = corner_fn(image_size, offset=(0, image_size[0]), orientations=['lr']) line_list.append(line) line = corner_fn(image_size, offset=(0, 2 * image_size[0]), orientations=['lr', 'ud', 'reverse']) line_list.append(line) line = genTwoPointLineBlurposition_list( (image_size[1], 2 * image_size[0] + int(image_size[0] / 2)), (2 * image_size[1], 2 * image_size[0] + int(image_size[0] / 2))) line_list.append(line) line = genTwoPointLineBlurposition_list( (2 * image_size[1], 2 * image_size[0] + int(image_size[0] / 2)), (3 * image_size[1], 2 * image_size[0] + int(image_size[0] / 2))) line_list.append(line) point_list_segmented = [] for line in line_list: if measurement_redundancy == 2: middle = int(np.floor((len(line) - 1) / 2)) point_list_segmented.append(np.asarray(line[:middle])) point_list_segmented.append(np.asarray(line[middle:-1])) else: point_list_segmented.append(np.asarray(line[:-1])) # for points in point_list_segmented: # points[np.where(points >= 3*image_size)] = 3*image_size[0]-1 return point_list_segmented def generate_open_corner(image_size, offset=(0, 0), orientations=[]): midside = (int(image_size[0] / 2), int(image_size[1] / 2)) diamond_points = [(0, midside[0]), (int(image_size[1] / 3), int(image_size[0] / 6)), (image_size[1], image_size[0])] diamond_points = flip_pts(diamond_points, image_size, orientations) line_list = [] for i in range(len(diamond_points) - 1): p1 = tuple(p + q for p, q in zip(diamond_points[i], offset)) p2 = tuple(p + q for p, q in zip(diamond_points[i + 1], offset)) line = genTwoPointLineBlurposition_list(p1, p2) line_list.append(line) return np.concatenate(line_list) def generate_diamond_corner(image_size, offset=(0, 0), orientations=[]): midside = (int(image_size[0] / 2), int(image_size[1] / 2)) diamond_points = [(0, midside[0]), (midside[1], int(image_size[0] / 5)), (int(4 * image_size[1] / 5), midside[0]), (midside[1], image_size[0])] diamond_points = flip_pts(diamond_points, image_size, orientations) line_list = [] for i in range(len(diamond_points) - 1): p1 = tuple(p + q for p, q in zip(diamond_points[i], offset)) p2 = tuple(p + q for p, q in zip(diamond_points[i + 1], offset)) line = genTwoPointLineBlurposition_list(p1, p2) line_list.append(line) return np.concatenate(line_list) def genRasterMotionPathway_fallback(object_size, image_size, full_object_multi_pass=False): """Function which generates a list of points which make up a complete raster scan of a given FOV, given a small capture FOV Args: image_size: Capture frame size in (y,x) object_size: Sample size in (y,x), should be larger than image_size full_object_multi_pass: (False) Flag to force kernel generation to scan full object multiple times instead of dividing it into segments Returns: A 2D ndarray where each value is it's index in the input blur_kernel_map """ measurement_count = np.ceil(object_size / image_size).astype(np.int) # two components in x and y assert np.any(measurement_count > 1), "image_size must be smaller than object_size!" print("Image size requires %d x %d images" % (measurement_count[0], measurement_count[1])) raster_segments = np.zeros((measurement_count[0] * 2, 2), dtype=np.int) y_stride = object_size[0] / measurement_count[0] x_stride = object_size[1] / measurement_count[1] minor_stride_side = 'r' raster_point_list = [] for row in np.arange(measurement_count[0]): # Place the vertical upright if minor_stride_side == 'r': raster_segments[(2 * row), :] = [np.ceil(image_size[0] * (row + 0.5)).astype(int), np.ceil(image_size[1] * 0.5).astype(int)] raster_segments[(2 * row) + 1, :] = [np.ceil(image_size[0] * (row + 0.5)).astype(int), np.ceil(object_size[1] - image_size[1] * 0.5).astype(int)] minor_stride_side = 'l' else: raster_segments[(2 * row), :] = [np.ceil(image_size[0] * (row + 0.5)).astype(int), np.ceil(object_size[1] - image_size[1] * 0.5).astype(int)] raster_segments[(2 * row) + 1, :] = [np.ceil(image_size[0] * (row + 0.5) ).astype(int), np.ceil(image_size[1] * 0.5).astype(int)] minor_stride_side = 'r' # Determine movement direction of this row in X if raster_segments[(2 * row), 1] < raster_segments[(2 * row) + 1, 1]: move_direction_x = 1 else: move_direction_x = -1 # always move down one move_direction_y = 1 # Determine points to use for horizontal scan if row == 0: if measurement_count[0] == 1: x_position_list = np.arange(0, object_size[1], move_direction_x) else: x_position_list = np.arange(0, raster_segments[(2 * row) + 1, 1], move_direction_x) elif row == measurement_count[0] - 1: x_position_list = np.arange(raster_segments[(2 * row), 1], object_size[1], move_direction_x) else: x_position_list = np.arange(raster_segments[(2 * row), 1], raster_segments[(2 * row) + 1, 1], move_direction_x) for position_x in x_position_list: raster_point_list.append([raster_segments[(2 * row), 0], position_x]) # Vertical scan if np.ceil(image_size[0] * (row + 1.5)) < object_size[0]: for position_y in np.arange(np.ceil(image_size[0] * (row + 0.5)), np.ceil(image_size[0] * (row + 1.5))).astype(int): raster_point_list.append([position_y.astype(int), raster_segments[(2 * row) + 1, 1]]) raster_point_list =
np.asarray(raster_point_list)
numpy.asarray
# Copyright (c) 2017, Lehrstuhl fuer Angewandte Mechanik, Technische # Universitaet Muenchen. # # Distributed under BSD-3-Clause License. See LICENSE-File for more information # """ Element Module in which the Finite Elements are described on Element level. This Module is arbitrarily extensible. The idea is to use the basis class Element which provides the functionality for an efficient solution of a time integration by only once calling the internal tensor computation and then extracting the tangential stiffness matrix and the internal force vector in one run. Some remarks resulting in the observations of the profiler: Most of the time is spent with python-functions, when they are used. For instance the kron-function in order to build the scattered geometric stiffness matrix or the trace function are very inefficient. They can be done better when using direct functions. If some element things are really time critical, it is recommended to port the heavy computation to FORTRAN. This can be achieved by using the provided f2py routines and reprogram the stuff for the own use. """ __all__ = ['Element', 'Tri3', 'Tri6', 'Quad4', 'Quad8', 'Tet4', 'Tet10', 'Hexa8', 'Hexa20', 'Bar2Dlumped', 'BoundaryElement', 'Tri3Boundary', 'Tri6Boundary', 'Quad4Boundary', 'Quad8Boundary', 'LineLinearBoundary', 'LineQuadraticBoundary', ] import numpy as np from numpy import sqrt # Try to import Fortran routines use_fortran = False try: import amfe.f90_element use_fortran = True except Exception: print('''Python was not able to load the fast fortran element routines.''') #use_fortran = False #print('Explicit no use of fortran routines in the Element routine') def scatter_matrix(Mat, ndim): ''' Scatter the symmetric (geometric stiffness) matrix to all dofs. What is basically done is to perform the np.kron(Mat, eye(ndim)) Parameters ---------- Mat : ndarray Matrix that should be scattered ndim : int number of dimensions of finite element. If it's a 2D element, ndim=2, if 3D, ndim=3 Returns ------- Mat_scattered : ndarray scattered matrix ''' dof_small_row = Mat.shape[0] dof_small_col = Mat.shape[1] Mat_scattered = np.zeros((dof_small_row*ndim, dof_small_col*ndim)) for i in range(dof_small_row): for j in range(dof_small_col): for k in range(ndim): Mat_scattered[ndim*i+k,ndim*j+k] = Mat[i,j] return Mat_scattered def compute_B_matrix(B_tilde, F): ''' Compute the B-matrix used in Total Lagrangian Finite Elements. Parameters ---------- F : ndarray deformation gradient (dx_dX) B_tilde : ndarray Matrix of the spatial derivative of the shape functions: dN_dX Returns ------- B : ndarray B matrix such that {delta_E} = B @ {delta_u^e} Notes ----- When the Voigt notation is used in this Reference, the variables are denoted with curly brackets. ''' no_of_nodes = B_tilde.shape[0] no_of_dims = B_tilde.shape[1] # spatial dofs per node, i.e. 2 for 2D or 3 for 3D b = B_tilde B = np.zeros((no_of_dims*(no_of_dims+1)//2, no_of_nodes*no_of_dims)) F11 = F[0,0] F12 = F[0,1] F21 = F[1,0] F22 = F[1,1] if no_of_dims == 3: F13 = F[0,2] F31 = F[2,0] F23 = F[1,2] F32 = F[2,1] F33 = F[2,2] for i in range(no_of_nodes): if no_of_dims == 2: B[:, i*no_of_dims : (i+1)*no_of_dims] = [ [F11*b[i,0], F21*b[i,0]], [F12*b[i,1], F22*b[i,1]], [F11*b[i,1] + F12*b[i,0], F21*b[i,1] + F22*b[i,0]]] else: B[:, i*no_of_dims : (i+1)*no_of_dims] = [ [F11*b[i,0], F21*b[i,0], F31*b[i,0]], [F12*b[i,1], F22*b[i,1], F32*b[i,1]], [F13*b[i,2], F23*b[i,2], F33*b[i,2]], [F12*b[i,2] + F13*b[i,1], F22*b[i,2] + F23*b[i,1], F32*b[i,2] + F33*b[i,1]], [F13*b[i,0] + F11*b[i,2], F23*b[i,0] + F21*b[i,2], F33*b[i,0] + F31*b[i,2]], [F11*b[i,1] + F12*b[i,0], F21*b[i,1] + F22*b[i,0], F31*b[i,1] + F32*b[i,0]]] return B # Overloading the python functions with Fortran functions, if possible if use_fortran: compute_B_matrix = amfe.f90_element.compute_b_matrix scatter_matrix = amfe.f90_element.scatter_matrix class Element(): ''' Anonymous baseclass for all elements. It contains the methods needed for the computation of the element stuff. Attributes ---------- material : instance of amfe.HyperelasticMaterial Class containing the material behavior. name : str Name for the postprocessing tool to identify the characteristics of the element ''' name = None def __init__(self, material=None): ''' Parameters ---------- material : amfe.HyperelasticMaterial - object Object handling the material ''' self.material = material self.K = None self.f = None self.S = None self.E = None def _compute_tensors(self, X, u, t): ''' Virtual function for the element specific implementation of a tensor computation routine which will be called before _k_int and _f_int will be called. For many computations the tensors need to be computed the same way. ''' pass def _m_int(self, X, u, t=0): ''' Virtual function for the element specific implementation of the mass matrix; ''' pass def k_and_f_int(self, X, u, t=0): ''' Returns the tangential stiffness matrix and the internal nodal force of the Element. Parameters ---------- X : ndarray nodal coordinates given in Voigt notation (i.e. a 1-D-Array of type [x_1, y_1, z_1, x_2, y_2, z_2 etc.]) u : ndarray nodal displacements given in Voigt notation t : float time Returns ------- k_int : ndarray The tangential stiffness matrix (ndarray of dimension (ndim, ndim)) f_int : ndarray The nodal force vector (ndarray of dimension (ndim,)) Examples -------- TODO ''' self._compute_tensors(X, u, t) return self.K, self.f def k_int(self, X, u, t=0): ''' Returns the tangential stiffness matrix of the Element. Parameters ---------- X : ndarray nodal coordinates given in Voigt notation (i.e. a 1-D-Array of type [x_1, y_1, z_1, x_2, y_2, z_2 etc.]) u : ndarray nodal displacements given in Voigt notation t : float time Returns ------- k_int : ndarray The tangential stiffness matrix (numpy.ndarray of type ndim x ndim) ''' self._compute_tensors(X, u, t) return self.K def f_int(self, X, u, t=0): ''' Returns the internal element restoring force f_int Parameters ---------- X : ndarray nodal coordinates given in Voigt notation (i.e. a 1-D-Array of type [x_1, y_1, z_1, x_2, y_2, z_2 etc.]) u : ndarray nodal displacements given in Voigt notation t : float, optional time, default value: 0. Returns ------- f_int : ndarray The nodal force vector (numpy.ndarray of dimension (ndim,)) ''' self._compute_tensors(X, u, t) return self.f def m_and_vec_int(self, X, u, t=0): ''' Returns mass matrix of the Element and zero vector of size X. Parameters ---------- X : ndarray nodal coordinates given in Voigt notation (i.e. a 1-D-Array of type [x_1, y_1, z_1, x_2, y_2, z_2 etc.]) u : ndarray nodal displacements given in Voigt notation t : float, optional time, default value: 0. Returns ------- m_int : ndarray The consistent mass matrix of the element (numpy.ndarray of dimension (ndim,ndim)) vec : ndarray vector (containing zeros) of dimension (ndim,) ''' return self._m_int(X, u, t), np.zeros_like(X) def m_int(self, X, u, t=0): ''' Returns the mass matrix of the element. Parameters ---------- X : ndarray nodal coordinates given in Voigt notation (i.e. a 1-D-Array of type [x_1, y_1, z_1, x_2, y_2, z_2 etc.]) u : ndarray nodal displacements given in Voigt notation t : float, optional time, default value: 0. Returns ------- m_int : ndarray The consistent mass matrix of the element (numpy.ndarray of dimension (ndim,ndim)) ''' return self._m_int(X, u, t) def k_f_S_E_int(self, X, u, t=0): ''' Returns the tangential stiffness matrix, the internal nodal force, the strain and the stress tensor (voigt-notation) of the Element. Parameters ---------- X : ndarray nodal coordinates given in Voigt notation (i.e. a 1-D-Array of type [x_1, y_1, z_1, x_2, y_2, z_2 etc.]) u : ndarray nodal displacements given in Voigt notation t : float time Returns ------- K : ndarray The tangential stiffness matrix (ndarray of dimension (ndim, ndim)) f : ndarray The nodal force vector (ndarray of dimension (ndim,)) S : ndarray The stress tensor (ndarray of dimension (no_of_nodes, 6)) E : ndarray The strain tensor (ndarray of dimension (no_of_nodes, 6)) Examples -------- TODO ''' self._compute_tensors(X, u, t) return self.K, self.f, self.S, self.E class Tri3(Element): ''' Element class for a plane triangle element in Total Lagrangian formulation. The displacements are given in x- and y-coordinates; Notes ----- The Element assumes constant strain and stress over the whole element. Thus the approximation quality is very moderate. References ---------- Basis for this implementation is the Monograph of Ted Belytschko: Nonlinear Finite Elements for Continua and Structures. pp. 201 and 207. ''' plane_stress = True name = 'Tri3' def __init__(self, *args, **kwargs): ''' Parameters ---------- material : class HyperelasticMaterial Material class representing the material ''' super().__init__(*args, **kwargs) self.K = np.zeros((6,6)) self.f = np.zeros(6) self.S = np.zeros((3,6)) self.E = np.zeros((3,6)) def _compute_tensors(self, X, u, t): ''' Compute the tensors B0_tilde, B0, F, E and S at the Gauss Points. Variables --------- B0_tilde: ndarray Die Ableitung der Ansatzfunktionen nach den x- und y-Koordinaten (2x3-Matrix). In den Zeilein stehen die Koordinatenrichtungen, in den Spalten die Ansatzfunktionen B0: ndarray The mapping matrix of delta E = B0 * u^e F: ndarray Deformation gradient (2x2-Matrix) E: ndarray Der Green-Lagrange strain tensor (2x2-Matrix) S: ndarray 2. Piola-Kirchhoff stress tensor, using Kirchhoff material (2x2-Matrix) ''' d = self.material.thickness X1, Y1, X2, Y2, X3, Y3 = X u_mat = u.reshape((-1,2)) det = (X3-X2)*(Y1-Y2) - (X1-X2)*(Y3-Y2) A0 = 0.5*det dN_dX = 1/det*np.array([[Y2-Y3, X3-X2], [Y3-Y1, X1-X3], [Y1-Y2, X2-X1]]) H = u_mat.T @ dN_dX F = H + np.eye(2) E = 1/2*(H + H.T + H.T @ H) S, S_v, C_SE = self.material.S_Sv_and_C_2d(E) B0 = compute_B_matrix(dN_dX, F) K_geo_small = dN_dX @ S @ dN_dX.T * det/2 * d K_geo = scatter_matrix(K_geo_small, 2) K_mat = B0.T @ C_SE @ B0 * det/2 * d self.K = (K_geo + K_mat) self.f = B0.T @ S_v * det/2 * d self.E = np.ones((3,1)) @ np.array([[E[0,0], E[0,1], 0, E[1,1], 0, 0]]) self.S = np.ones((3,1)) @ np.array([[S[0,0], S[0,1], 0, S[1,1], 0, 0]]) return def _m_int(self, X, u, t=0): ''' Compute the mass matrix. Parameters ---------- X : ndarray Position of the nodal coordinates in undeformed configuration using voigt notation X = (X1, Y1, X2, Y2, X3, Y3) u : ndarray Displacement of the element using same voigt notation as for X t : float Time Returns ------- M : ndarray Mass matrix of the given element ''' t = self.material.thickness rho = self.material.rho X1, Y1, X2, Y2, X3, Y3 = X self.A0 = 0.5*((X3-X2)*(Y1-Y2) - (X1-X2)*(Y3-Y2)) self.M = np.array([[2, 0, 1, 0, 1, 0], [0, 2, 0, 1, 0, 1], [1, 0, 2, 0, 1, 0], [0, 1, 0, 2, 0, 1], [1, 0, 1, 0, 2, 0], [0, 1, 0, 1, 0, 2]])*self.A0/12*t*rho return self.M class Tri6(Element): ''' 6 node second order triangle Triangle Element with 6 dofs; 3 dofs at the corner, 3 dofs in the intermediate point of every face. ''' plane_stress = True name = 'Tri6' def __init__(self, *args, **kwargs): super().__init__(*args, **kwargs) self.K = np.zeros((12,12)) self.f = np.zeros(12) self.M_small = np.zeros((6,6)) self.M = np.zeros((12,12)) self.S = np.zeros((6,6)) self.E = np.zeros((6,6)) self.gauss_points2 = ((2/3, 1/6, 1/6, 1/3), (1/6, 2/3, 1/6, 1/3), (1/6, 1/6, 2/3, 1/3)) self.extrapolation_points = np.array([ [5/3, -1/3, -1/3, 2/3, -1/3, 2/3], [-1/3, 5/3, -1/3, 2/3, 2/3, -1/3], [-1/3, -1/3, 5/3, -1/3, 2/3, 2/3]]).T # self.gauss_points3 = ((1/3, 1/3, 1/3, -27/48), # (0.6, 0.2, 0.2, 25/48), # (0.2, 0.6, 0.2, 25/48), # (0.2, 0.2, 0.6, 25/48)) # # alpha1 = 0.0597158717 # beta1 = 0.4701420641 # 1/(np.sqrt(15)-6) # w1 = 0.1323941527 # # alpha2 = 0.7974269853 # # beta2 = 0.1012865073 # 1/(np.sqrt(15)+6) # w2 = 0.1259391805 # # self.gauss_points5 = ((1/3, 1/3, 1/3, 0.225), # (alpha1, beta1, beta1, w1), # (beta1, alpha1, beta1, w1), # (beta1, beta1, alpha1, w1), # (alpha2, beta2, beta2, w2), # (beta2, alpha2, beta2, w2), # (beta2, beta2, alpha2, w2)) self.gauss_points = self.gauss_points2 def _compute_tensors(self, X, u, t): ''' Tensor computation the same way as in the Tri3 element ''' X1, Y1, X2, Y2, X3, Y3, X4, Y4, X5, Y5, X6, Y6 = X u_mat = u.reshape((-1,2)) # X_mat = X.reshape((-1,2)) d = self.material.thickness self.K *= 0 self.f *= 0 self.E *= 0 self.S *= 0 for n_gauss, (L1, L2, L3, w) in enumerate(self.gauss_points): dN_dL = np.array([ [4*L1 - 1, 0, 0], [ 0, 4*L2 - 1, 0], [ 0, 0, 4*L3 - 1], [ 4*L2, 4*L1, 0], [ 0, 4*L3, 4*L2], [ 4*L3, 0, 4*L1]]) # the entries in the jacobian dX_dL Jx1 = 4*L2*X4 + 4*L3*X6 + X1*(4*L1 - 1) Jx2 = 4*L1*X4 + 4*L3*X5 + X2*(4*L2 - 1) Jx3 = 4*L1*X6 + 4*L2*X5 + X3*(4*L3 - 1) Jy1 = 4*L2*Y4 + 4*L3*Y6 + Y1*(4*L1 - 1) Jy2 = 4*L1*Y4 + 4*L3*Y5 + Y2*(4*L2 - 1) Jy3 = 4*L1*Y6 + 4*L2*Y5 + Y3*(4*L3 - 1) det = Jx1*Jy2 - Jx1*Jy3 - Jx2*Jy1 + Jx2*Jy3 + Jx3*Jy1 - Jx3*Jy2 dL_dX = 1/det*np.array([[ Jy2 - Jy3, -Jx2 + Jx3], [-Jy1 + Jy3, Jx1 - Jx3], [ Jy1 - Jy2, -Jx1 + Jx2]]) B0_tilde = dN_dL @ dL_dX H = u_mat.T @ B0_tilde F = H + np.eye(2) E = 1/2*(H + H.T + H.T @ H) S, S_v, C_SE = self.material.S_Sv_and_C_2d(E) B0 = compute_B_matrix(B0_tilde, F) K_geo_small = B0_tilde @ S @ B0_tilde.T * det / 2 * d K_geo = scatter_matrix(K_geo_small, 2) K_mat = B0.T @ C_SE @ B0 * det / 2 * d self.K += (K_geo + K_mat) * w self.f += B0.T @ S_v * det / 2*d*w # extrapolation of gauss element extrapol = self.extrapolation_points[:,n_gauss:n_gauss+1] self.S += extrapol @ np.array([[S[0,0], S[0,1], 0, S[1,1], 0, 0]]) self.E += extrapol @ np.array([[E[0,0], E[0,1], 0, E[1,1], 0, 0]]) return def _m_int(self, X, u, t=0): X1, Y1, X2, Y2, X3, Y3, X4, Y4, X5, Y5, X6, Y6 = X t = self.material.thickness rho = self.material.rho self.M_small *= 0 for L1, L2, L3, w in self.gauss_points: # the entries in the jacobian dX_dL Jx1 = 4*L2*X4 + 4*L3*X6 + X1*(4*L1 - 1) Jx2 = 4*L1*X4 + 4*L3*X5 + X2*(4*L2 - 1) Jx3 = 4*L1*X6 + 4*L2*X5 + X3*(4*L3 - 1) Jy1 = 4*L2*Y4 + 4*L3*Y6 + Y1*(4*L1 - 1) Jy2 = 4*L1*Y4 + 4*L3*Y5 + Y2*(4*L2 - 1) Jy3 = 4*L1*Y6 + 4*L2*Y5 + Y3*(4*L3 - 1) det = Jx1*Jy2 - Jx1*Jy3 - Jx2*Jy1 + Jx2*Jy3 + Jx3*Jy1 - Jx3*Jy2 N = np.array([ [L1*(2*L1 - 1)], [L2*(2*L2 - 1)], [L3*(2*L3 - 1)], [ 4*L1*L2], [ 4*L2*L3], [ 4*L1*L3]]) self.M_small += N.dot(N.T) * det/2 * rho * t * w self.M = scatter_matrix(self.M_small, 2) return self.M class Quad4(Element): ''' Quadrilateral 2D element with bilinear shape functions. .. code:: ^ eta 4 | 3 o_____|_____o | | | | | | --------+----------> | | | xi | | | o_____|_____o 1 | 2 ''' name = 'Quad4' def __init__(self, *args, **kwargs): ''' Definition of material properties and thickness as they are 2D-Elements. ''' super().__init__(*args, **kwargs) self.K = np.zeros((8,8)) self.f = np.zeros(8) self.M_small = np.zeros((4,4)) self.M = np.zeros((8,8)) self.S = np.zeros((4,6)) self.E = np.zeros((4,6)) # Gauss-Point-Handling: g1 = 1/np.sqrt(3) # Tupel for enumerator (xi, eta, weight) self.gauss_points = ((-g1, -g1, 1.), ( g1, -g1, 1.), ( g1, g1, 1.), (-g1, g1, 1.)) self.extrapolation_points = np.array([ [1+np.sqrt(3)/2, -1/2, 1-np.sqrt(3)/2, -1/2], [-1/2, 1+np.sqrt(3)/2, -1/2, 1-np.sqrt(3)/2], [1-np.sqrt(3)/2, -1/2, 1+np.sqrt(3)/2, -1/2], [-1/2, 1-np.sqrt(3)/2, -1/2, 1+np.sqrt(3)/2]]).T def _compute_tensors(self, X, u, t): ''' Compute the tensors. ''' X_mat = X.reshape(-1, 2) u_e = u.reshape(-1, 2) t = self.material.thickness # Empty former values because they are properties and a new calculation # for another element or displacement than before is called self.K *= 0 self.f *= 0 self.S *= 0 self.E *= 0 for n_gauss, (xi, eta, w) in enumerate(self.gauss_points): dN_dxi = np.array([ [ eta/4 - 1/4, xi/4 - 1/4], [-eta/4 + 1/4, -xi/4 - 1/4], [ eta/4 + 1/4, xi/4 + 1/4], [-eta/4 - 1/4, -xi/4 + 1/4]]) dX_dxi = X_mat.T @ dN_dxi det = dX_dxi[0,0]*dX_dxi[1,1] - dX_dxi[1,0]*dX_dxi[0,1] dxi_dX = 1/det * np.array([[ dX_dxi[1,1], -dX_dxi[0,1]], [-dX_dxi[1,0], dX_dxi[0,0]]]) B0_tilde = dN_dxi @ dxi_dX H = u_e.T @ B0_tilde F = H + np.eye(2) E = 1/2*(H + H.T + H.T @ H) S, S_v, C_SE = self.material.S_Sv_and_C_2d(E) B0 = compute_B_matrix(B0_tilde, F) K_geo_small = B0_tilde @ S @ B0_tilde.T * det*t K_geo = scatter_matrix(K_geo_small, 2) K_mat = B0.T @ C_SE @ B0 *det*t self.K += (K_geo + K_mat)*w self.f += B0.T @ S_v*det*t*w # extrapolation of gauss element extrapol = self.extrapolation_points[:,n_gauss:n_gauss+1] self.S += extrapol @ np.array([[S[0,0], S[0,1], 0, S[1,1], 0, 0]]) self.E += extrapol @ np.array([[E[0,0], E[0,1], 0, E[1,1], 0, 0]]) return def _m_int(self, X, u, t=0): X1, Y1, X2, Y2, X3, Y3, X4, Y4 = X self.M_small *= 0 t = self.material.thickness rho = self.material.rho for xi, eta, w in self.gauss_points: det = 1/8*(- X1*Y2*eta + X1*Y2 + X1*Y3*eta - X1*Y3*xi + X1*Y4*xi - X1*Y4 + X2*Y1*eta - X2*Y1 + X2*Y3*xi + X2*Y3 - X2*Y4*eta - X2*Y4*xi - X3*Y1*eta + X3*Y1*xi - X3*Y2*xi - X3*Y2 + X3*Y4*eta + X3*Y4 - X4*Y1*xi + X4*Y1 + X4*Y2*eta + X4*Y2*xi - X4*Y3*eta - X4*Y3) N = np.array([ [(-eta + 1)*(-xi + 1)/4], [ (-eta + 1)*(xi + 1)/4], [ (eta + 1)*(xi + 1)/4], [ (eta + 1)*(-xi + 1)/4]]) self.M_small += N.dot(N.T) * det * rho * t * w self.M = scatter_matrix(self.M_small, 2) return self.M class Quad8(Element): ''' Plane Quadrangle with quadratic shape functions and 8 nodes. 4 nodes are at every corner, 4 nodes on every face. ''' name = 'Quad8' def __init__(self, *args, **kwargs): ''' Definition of material properties and thickness as they are 2D-Elements. ''' super().__init__(*args, **kwargs) self.K = np.zeros((16,16)) self.f = np.zeros(16) self.M_small = np.zeros((8,8)) self.M = np.zeros((16,16)) self.S = np.zeros((8,6)) self.E = np.zeros((8,6)) # Quadrature like ANSYS or ABAQUS: g = np.sqrt(3/5) w = 5/9 w0 = 8/9 self.gauss_points = ((-g, -g, w*w), ( g, -g, w*w ), ( g, g, w*w), (-g, g, w*w), ( 0, -g, w0*w ), ( g, 0, w*w0), ( 0, g, w0*w), (-g, 0, w*w0), ( 0, 0, w0*w0)) # a little bit dirty but correct. Comes from sympy file. self.extrapolation_points = np.array( [[ 5*sqrt(15)/18 + 10/9, 5/18, -5*sqrt(15)/18 + 10/9, 5/18, -5/9 - sqrt(15)/9, -5/9 + sqrt(15)/9, -5/9 + sqrt(15)/9, -5/9 - sqrt(15)/9, 4/9], [5/18, 5*sqrt(15)/18 + 10/9, 5/18, -5*sqrt(15)/18 + 10/9, -5/9 - sqrt(15)/9, -5/9 - sqrt(15)/9, -5/9 + sqrt(15)/9, -5/9 + sqrt(15)/9, 4/9], [-5*sqrt(15)/18 + 10/9, 5/18, 5*sqrt(15)/18 + 10/9, 5/18, -5/9 + sqrt(15)/9, -5/9 - sqrt(15)/9, -5/9 - sqrt(15)/9, -5/9 + sqrt(15)/9, 4/9], [ 5/18, -5*sqrt(15)/18 + 10/9, 5/18, 5*sqrt(15)/18 + 10/9, -5/9 + sqrt(15)/9, -5/9 + sqrt(15)/9, -5/9 - sqrt(15)/9, -5/9 - sqrt(15)/9, 4/9], [ 0, 0, 0, 0, sqrt(15)/6 + 5/6, 0, -sqrt(15)/6 + 5/6, 0, -2/3], [0, 0, 0, 0, 0, sqrt(15)/6 + 5/6, 0, -sqrt(15)/6 + 5/6, -2/3], [ 0, 0, 0, 0, -sqrt(15)/6 + 5/6, 0, sqrt(15)/6 + 5/6, 0, -2/3], [ 0, 0, 0, 0, 0, -sqrt(15)/6 + 5/6, 0, sqrt(15)/6 + 5/6, -2/3]]) def _compute_tensors(self, X, u, t): # X1, Y1, X2, Y2, X3, Y3, X4, Y4, X5, Y5, X6, Y6, X7, Y7, X8, Y8 = X X_mat = X.reshape(-1, 2) u_e = u.reshape(-1, 2) t = self.material.thickness self.K *= 0 self.f *= 0 self.S *= 0 self.E *= 0 for n_gauss, (xi, eta, w) in enumerate(self.gauss_points): # this is now the standard procedure for Total Lagrangian behavior dN_dxi = np.array([ [-(eta - 1)*(eta + 2*xi)/4, -(2*eta + xi)*(xi - 1)/4], [ (eta - 1)*(eta - 2*xi)/4, (2*eta - xi)*(xi + 1)/4], [ (eta + 1)*(eta + 2*xi)/4, (2*eta + xi)*(xi + 1)/4], [-(eta + 1)*(eta - 2*xi)/4, -(2*eta - xi)*(xi - 1)/4], [ xi*(eta - 1), xi**2/2 - 1/2], [ -eta**2/2 + 1/2, -eta*(xi + 1)], [ -xi*(eta + 1), -xi**2/2 + 1/2], [ eta**2/2 - 1/2, eta*(xi - 1)]]) dX_dxi = X_mat.T @ dN_dxi det = dX_dxi[0,0]*dX_dxi[1,1] - dX_dxi[1,0]*dX_dxi[0,1] dxi_dX = 1/det*np.array([[ dX_dxi[1,1], -dX_dxi[0,1]], [-dX_dxi[1,0], dX_dxi[0,0]]]) B0_tilde = dN_dxi @ dxi_dX H = u_e.T @ B0_tilde F = H + np.eye(2) E = 1/2*(H + H.T + H.T @ H) S, S_v, C_SE = self.material.S_Sv_and_C_2d(E) B0 = compute_B_matrix(B0_tilde, F) K_geo_small = B0_tilde @ S @ B0_tilde.T * det*t K_geo = scatter_matrix(K_geo_small, 2) K_mat = B0.T @ C_SE @ B0 * det * t self.K += w*(K_geo + K_mat) self.f += B0.T @ S_v*det*t*w # extrapolation of gauss element extrapol = self.extrapolation_points[:,n_gauss:n_gauss+1] self.S += extrapol @ np.array([[S[0,0], S[0,1], 0, S[1,1], 0, 0]]) self.E += extrapol @ np.array([[E[0,0], E[0,1], 0, E[1,1], 0, 0]]) return def _m_int(self, X, u, t=0): ''' Mass matrix using CAS-System ''' X_mat = X.reshape(-1, 2) t = self.material.thickness rho = self.material.rho self.M_small *= 0 for xi, eta, w in self.gauss_points: N = np.array([ [(-eta + 1)*(-xi + 1)*(-eta - xi - 1)/4], [ (-eta + 1)*(xi + 1)*(-eta + xi - 1)/4], [ (eta + 1)*(xi + 1)*(eta + xi - 1)/4], [ (eta + 1)*(-xi + 1)*(eta - xi - 1)/4], [ (-eta + 1)*(-xi**2 + 1)/2], [ (-eta**2 + 1)*(xi + 1)/2], [ (eta + 1)*(-xi**2 + 1)/2], [ (-eta**2 + 1)*(-xi + 1)/2]]) dN_dxi = np.array([ [-(eta - 1)*(eta + 2*xi)/4, -(2*eta + xi)*(xi - 1)/4], [ (eta - 1)*(eta - 2*xi)/4, (2*eta - xi)*(xi + 1)/4], [ (eta + 1)*(eta + 2*xi)/4, (2*eta + xi)*(xi + 1)/4], [-(eta + 1)*(eta - 2*xi)/4, -(2*eta - xi)*(xi - 1)/4], [ xi*(eta - 1), xi**2/2 - 1/2], [ -eta**2/2 + 1/2, -eta*(xi + 1)], [ -xi*(eta + 1), -xi**2/2 + 1/2], [ eta**2/2 - 1/2, eta*(xi - 1)]]) dX_dxi = X_mat.T @ dN_dxi det = dX_dxi[0,0]*dX_dxi[1,1] - dX_dxi[1,0]*dX_dxi[0,1] self.M_small += N @ N.T * det * rho * t * w self.M = scatter_matrix(self.M_small, 2) return self.M class Tet4(Element): ''' Tetraeder-Element with 4 nodes ''' name = 'Tet4' def __init__(self, *args, **kwargs): super().__init__(*args, **kwargs) self.K = np.zeros((12,12)) self.f = np.zeros(12) self.M = np.zeros((12,12)) self.S = np.zeros((4,6)) self.E = np.zeros((4,6)) def _compute_tensors(self, X, u, t): X1, Y1, Z1, X2, Y2, Z2, X3, Y3, Z3, X4, Y4, Z4 = X u_mat = u.reshape(-1, 3) X_mat = X.reshape(-1, 3) det = -X1*Y2*Z3 + X1*Y2*Z4 + X1*Y3*Z2 - X1*Y3*Z4 - X1*Y4*Z2 + X1*Y4*Z3 \ + X2*Y1*Z3 - X2*Y1*Z4 - X2*Y3*Z1 + X2*Y3*Z4 + X2*Y4*Z1 - X2*Y4*Z3 \ - X3*Y1*Z2 + X3*Y1*Z4 + X3*Y2*Z1 - X3*Y2*Z4 - X3*Y4*Z1 + X3*Y4*Z2 \ + X4*Y1*Z2 - X4*Y1*Z3 - X4*Y2*Z1 + X4*Y2*Z3 + X4*Y3*Z1 - X4*Y3*Z2 B0_tilde = 1/det*np.array([ [-Y2*Z3 + Y2*Z4 + Y3*Z2 - Y3*Z4 - Y4*Z2 + Y4*Z3, X2*Z3 - X2*Z4 - X3*Z2 + X3*Z4 + X4*Z2 - X4*Z3, -X2*Y3 + X2*Y4 + X3*Y2 - X3*Y4 - X4*Y2 + X4*Y3], [ Y1*Z3 - Y1*Z4 - Y3*Z1 + Y3*Z4 + Y4*Z1 - Y4*Z3, -X1*Z3 + X1*Z4 + X3*Z1 - X3*Z4 - X4*Z1 + X4*Z3, X1*Y3 - X1*Y4 - X3*Y1 + X3*Y4 + X4*Y1 - X4*Y3], [-Y1*Z2 + Y1*Z4 + Y2*Z1 - Y2*Z4 - Y4*Z1 + Y4*Z2, X1*Z2 - X1*Z4 - X2*Z1 + X2*Z4 + X4*Z1 - X4*Z2, -X1*Y2 + X1*Y4 + X2*Y1 - X2*Y4 - X4*Y1 + X4*Y2], [ Y1*Z2 - Y1*Z3 - Y2*Z1 + Y2*Z3 + Y3*Z1 - Y3*Z2, -X1*Z2 + X1*Z3 + X2*Z1 - X2*Z3 - X3*Z1 + X3*Z2, X1*Y2 - X1*Y3 - X2*Y1 + X2*Y3 + X3*Y1 - X3*Y2]]) H = u_mat.T @ B0_tilde F = H + np.eye(3) E = 1/2*(H + H.T + H.T @ H) S, S_v, C_SE = self.material.S_Sv_and_C(E) B0 = compute_B_matrix(B0_tilde, F) K_geo_small = B0_tilde @ S @ B0_tilde.T * det/6 K_geo = scatter_matrix(K_geo_small, 3) K_mat = B0.T @ C_SE @ B0 * det/6 self.K = K_geo + K_mat self.f = B0.T @ S_v*det/6 self.E = np.ones((4,1)) @ np.array([[E[0,0], E[0,1], E[0,2], E[1,1], E[1,2], E[2,2]]]) self.S = np.ones((4,1)) @ np.array([[S[0,0], S[0,1], S[0,2], S[1,1], S[1,2], S[2,2]]]) def _m_int(self, X, u, t=0): ''' Mass matrix using CAS-System ''' rho = self.material.rho X1, Y1, Z1, X2, Y2, Z2, X3, Y3, Z3, X4, Y4, Z4 = X det = X1*Y2*Z3 - X1*Y2*Z4 - X1*Y3*Z2 + X1*Y3*Z4 + X1*Y4*Z2 - X1*Y4*Z3 \ - X2*Y1*Z3 + X2*Y1*Z4 + X2*Y3*Z1 - X2*Y3*Z4 - X2*Y4*Z1 + X2*Y4*Z3 \ + X3*Y1*Z2 - X3*Y1*Z4 - X3*Y2*Z1 + X3*Y2*Z4 + X3*Y4*Z1 - X3*Y4*Z2 \ - X4*Y1*Z2 + X4*Y1*Z3 + X4*Y2*Z1 - X4*Y2*Z3 - X4*Y3*Z1 + X4*Y3*Z2 # same thing as above - it's not clear yet how the node numbering is done. det *= -1 V = det/6 self.M = V / 20 * rho * np.array([ [ 2., 0., 0., 1., 0., 0., 1., 0., 0., 1., 0., 0.], [ 0., 2., 0., 0., 1., 0., 0., 1., 0., 0., 1., 0.], [ 0., 0., 2., 0., 0., 1., 0., 0., 1., 0., 0., 1.], [ 1., 0., 0., 2., 0., 0., 1., 0., 0., 1., 0., 0.], [ 0., 1., 0., 0., 2., 0., 0., 1., 0., 0., 1., 0.], [ 0., 0., 1., 0., 0., 2., 0., 0., 1., 0., 0., 1.], [ 1., 0., 0., 1., 0., 0., 2., 0., 0., 1., 0., 0.], [ 0., 1., 0., 0., 1., 0., 0., 2., 0., 0., 1., 0.], [ 0., 0., 1., 0., 0., 1., 0., 0., 2., 0., 0., 1.], [ 1., 0., 0., 1., 0., 0., 1., 0., 0., 2., 0., 0.], [ 0., 1., 0., 0., 1., 0., 0., 1., 0., 0., 2., 0.], [ 0., 0., 1., 0., 0., 1., 0., 0., 1., 0., 0., 2.]]) return self.M class Tet10(Element): r''' Tet10 solid element; Node numbering is done like in ParaView and in [1]_ The node numbering is as follows: .. code:: 3 ,/|`\ ,/ | `\ ,8 '. `7 ,/ 9 `\ ,/ | `\ 1--------4--'.--------0 `\. | ,/ `\. | ,6 `5. '. ,/ `\. |/ `2 References ---------- .. [1] <NAME>: Advanced Finite Element Methods (ASEN 6367), Spring 2013. `Online Source`__ __ http://www.colorado.edu/engineering/CAS/courses.d/AFEM.d/AFEM.Ch10.d/ AFEM.Ch10.index.html ''' name = 'Tet10' def __init__(self, *args, **kwargs): ''' ''' super().__init__(*args, **kwargs) self.K = np.zeros((30,30)) self.f = np.zeros(30) self.M = np.zeros((30,30)) self.S = np.zeros((10,6)) self.E = np.zeros((10,6)) a = (5 - np.sqrt(5)) / 20 b = (5 + 3*np.sqrt(5)) / 20 w = 1/4 gauss_points_4 = ((b,a,a,a,w), (a,b,a,a,w), (a,a,b,a,w), (a,a,a,b,w),) self.gauss_points = gauss_points_4 c1 = 1/4 + 3*sqrt(5)/4 # close corner node c2 = -sqrt(5)/4 + 1/4 # far corner node m1 = 1/4 + sqrt(5)/4 # close mid-node m2 = -sqrt(5)/4 + 1/4 # far mid node self.extrapolation_points = np.array( [[c1, c2, c2, c2, m1, m2, m1, m1, m2, m2], [c2, c1, c2, c2, m1, m1, m2, m2, m1, m2], [c2, c2, c1, c2, m2, m1, m1, m2, m2, m1], [c2, c2, c2, c1, m2, m2, m2, m1, m1, m1]]).T def _compute_tensors(self, X, u, t): X1, Y1, Z1, \ X2, Y2, Z2, \ X3, Y3, Z3, \ X4, Y4, Z4, \ X5, Y5, Z5, \ X6, Y6, Z6, \ X7, Y7, Z7, \ X8, Y8, Z8, \ X9, Y9, Z9, \ X10, Y10, Z10 = X u_mat = u.reshape((10,3)) self.K *= 0 self.f *= 0 self.S *= 0 self.E *= 0 for n_gauss, (L1, L2, L3, L4, w) in enumerate(self.gauss_points): Jx1 = 4*L2*X5 + 4*L3*X7 + 4*L4*X8 + X1*(4*L1 - 1) Jx2 = 4*L1*X5 + 4*L3*X6 + 4*L4*X9 + X2*(4*L2 - 1) Jx3 = 4*L1*X7 + 4*L2*X6 + 4*L4*X10 + X3*(4*L3 - 1) Jx4 = 4*L1*X8 + 4*L2*X9 + 4*L3*X10 + X4*(4*L4 - 1) Jy1 = 4*L2*Y5 + 4*L3*Y7 + 4*L4*Y8 + Y1*(4*L1 - 1) Jy2 = 4*L1*Y5 + 4*L3*Y6 + 4*L4*Y9 + Y2*(4*L2 - 1) Jy3 = 4*L1*Y7 + 4*L2*Y6 + 4*L4*Y10 + Y3*(4*L3 - 1) Jy4 = 4*L1*Y8 + 4*L2*Y9 + 4*L3*Y10 + Y4*(4*L4 - 1) Jz1 = 4*L2*Z5 + 4*L3*Z7 + 4*L4*Z8 + Z1*(4*L1 - 1) Jz2 = 4*L1*Z5 + 4*L3*Z6 + 4*L4*Z9 + Z2*(4*L2 - 1) Jz3 = 4*L1*Z7 + 4*L2*Z6 + 4*L4*Z10 + Z3*(4*L3 - 1) Jz4 = 4*L1*Z8 + 4*L2*Z9 + 4*L3*Z10 + Z4*(4*L4 - 1) det = -Jx1*Jy2*Jz3 + Jx1*Jy2*Jz4 + Jx1*Jy3*Jz2 - Jx1*Jy3*Jz4 \ - Jx1*Jy4*Jz2 + Jx1*Jy4*Jz3 + Jx2*Jy1*Jz3 - Jx2*Jy1*Jz4 \ - Jx2*Jy3*Jz1 + Jx2*Jy3*Jz4 + Jx2*Jy4*Jz1 - Jx2*Jy4*Jz3 \ - Jx3*Jy1*Jz2 + Jx3*Jy1*Jz4 + Jx3*Jy2*Jz1 - Jx3*Jy2*Jz4 \ - Jx3*Jy4*Jz1 + Jx3*Jy4*Jz2 + Jx4*Jy1*Jz2 - Jx4*Jy1*Jz3 \ - Jx4*Jy2*Jz1 + Jx4*Jy2*Jz3 + Jx4*Jy3*Jz1 - Jx4*Jy3*Jz2 a1 = -Jy2*Jz3 + Jy2*Jz4 + Jy3*Jz2 - Jy3*Jz4 - Jy4*Jz2 + Jy4*Jz3 a2 = Jy1*Jz3 - Jy1*Jz4 - Jy3*Jz1 + Jy3*Jz4 + Jy4*Jz1 - Jy4*Jz3 a3 = -Jy1*Jz2 + Jy1*Jz4 + Jy2*Jz1 - Jy2*Jz4 - Jy4*Jz1 + Jy4*Jz2 a4 = Jy1*Jz2 - Jy1*Jz3 - Jy2*Jz1 + Jy2*Jz3 + Jy3*Jz1 - Jy3*Jz2 b1 = Jx2*Jz3 - Jx2*Jz4 - Jx3*Jz2 + Jx3*Jz4 + Jx4*Jz2 - Jx4*Jz3 b2 = -Jx1*Jz3 + Jx1*Jz4 + Jx3*Jz1 - Jx3*Jz4 - Jx4*Jz1 + Jx4*Jz3 b3 = Jx1*Jz2 - Jx1*Jz4 - Jx2*Jz1 + Jx2*Jz4 + Jx4*Jz1 - Jx4*Jz2 b4 = -Jx1*Jz2 + Jx1*Jz3 + Jx2*Jz1 - Jx2*Jz3 - Jx3*Jz1 + Jx3*Jz2 c1 = -Jx2*Jy3 + Jx2*Jy4 + Jx3*Jy2 - Jx3*Jy4 - Jx4*Jy2 + Jx4*Jy3 c2 = Jx1*Jy3 - Jx1*Jy4 - Jx3*Jy1 + Jx3*Jy4 + Jx4*Jy1 - Jx4*Jy3 c3 = -Jx1*Jy2 + Jx1*Jy4 + Jx2*Jy1 - Jx2*Jy4 - Jx4*Jy1 + Jx4*Jy2 c4 = Jx1*Jy2 - Jx1*Jy3 - Jx2*Jy1 + Jx2*Jy3 + Jx3*Jy1 - Jx3*Jy2 B0_tilde = 1/det*np.array([ [ a1*(4*L1 - 1), b1*(4*L1 - 1), c1*(4*L1 - 1)], [ a2*(4*L2 - 1), b2*(4*L2 - 1), c2*(4*L2 - 1)], [ a3*(4*L3 - 1), b3*(4*L3 - 1), c3*(4*L3 - 1)], [ a4*(4*L4 - 1), b4*(4*L4 - 1), c4*(4*L4 - 1)], [4*L1*a2 + 4*L2*a1, 4*L1*b2 + 4*L2*b1, 4*L1*c2 + 4*L2*c1], [4*L2*a3 + 4*L3*a2, 4*L2*b3 + 4*L3*b2, 4*L2*c3 + 4*L3*c2], [4*L1*a3 + 4*L3*a1, 4*L1*b3 + 4*L3*b1, 4*L1*c3 + 4*L3*c1], [4*L1*a4 + 4*L4*a1, 4*L1*b4 + 4*L4*b1, 4*L1*c4 + 4*L4*c1], [4*L2*a4 + 4*L4*a2, 4*L2*b4 + 4*L4*b2, 4*L2*c4 + 4*L4*c2], [4*L3*a4 + 4*L4*a3, 4*L3*b4 + 4*L4*b3, 4*L3*c4 + 4*L4*c3]]) H = u_mat.T @ B0_tilde F = H + np.eye(3) E = 1/2*(H + H.T + H.T @ H) S, S_v, C_SE = self.material.S_Sv_and_C(E) B0 = compute_B_matrix(B0_tilde, F) K_geo_small = B0_tilde @ S @ B0_tilde.T * det/6 K_geo = scatter_matrix(K_geo_small, 3) K_mat = B0.T @ C_SE @ B0 * det/6 self.K += (K_geo + K_mat) * w self.f += B0.T @ S_v * det/6 * w # extrapolation of gauss element extrapol = self.extrapolation_points[:,n_gauss:n_gauss+1] self.S += extrapol @ np.array([[S[0,0], S[0,1], S[0,2], S[1,1], S[1,2], S[2,2]]]) self.E += extrapol @ np.array([[E[0,0], E[0,1], E[0,2], E[1,1], E[1,2], E[2,2]]]) return def _m_int(self, X, u, t=0): ''' Mass matrix using CAS-System ''' X1, Y1, Z1, \ X2, Y2, Z2, \ X3, Y3, Z3, \ X4, Y4, Z4, \ X5, Y5, Z5, \ X6, Y6, Z6, \ X7, Y7, Z7, \ X8, Y8, Z8, \ X9, Y9, Z9, \ X10, Y10, Z10 = X X_mat = X.reshape((-1,3)) self.M *= 0 rho = self.material.rho for L1, L2, L3, L4, w in self.gauss_points: Jx1 = 4*L2*X5 + 4*L3*X7 + 4*L4*X8 + X1*(4*L1 - 1) Jx2 = 4*L1*X5 + 4*L3*X6 + 4*L4*X9 + X2*(4*L2 - 1) Jx3 = 4*L1*X7 + 4*L2*X6 + 4*L4*X10 + X3*(4*L3 - 1) Jx4 = 4*L1*X8 + 4*L2*X9 + 4*L3*X10 + X4*(4*L4 - 1) Jy1 = 4*L2*Y5 + 4*L3*Y7 + 4*L4*Y8 + Y1*(4*L1 - 1) Jy2 = 4*L1*Y5 + 4*L3*Y6 + 4*L4*Y9 + Y2*(4*L2 - 1) Jy3 = 4*L1*Y7 + 4*L2*Y6 + 4*L4*Y10 + Y3*(4*L3 - 1) Jy4 = 4*L1*Y8 + 4*L2*Y9 + 4*L3*Y10 + Y4*(4*L4 - 1) Jz1 = 4*L2*Z5 + 4*L3*Z7 + 4*L4*Z8 + Z1*(4*L1 - 1) Jz2 = 4*L1*Z5 + 4*L3*Z6 + 4*L4*Z9 + Z2*(4*L2 - 1) Jz3 = 4*L1*Z7 + 4*L2*Z6 + 4*L4*Z10 + Z3*(4*L3 - 1) Jz4 = 4*L1*Z8 + 4*L2*Z9 + 4*L3*Z10 + Z4*(4*L4 - 1) det = -Jx1*Jy2*Jz3 + Jx1*Jy2*Jz4 + Jx1*Jy3*Jz2 - Jx1*Jy3*Jz4 \ - Jx1*Jy4*Jz2 + Jx1*Jy4*Jz3 + Jx2*Jy1*Jz3 - Jx2*Jy1*Jz4 \ - Jx2*Jy3*Jz1 + Jx2*Jy3*Jz4 + Jx2*Jy4*Jz1 - Jx2*Jy4*Jz3 \ - Jx3*Jy1*Jz2 + Jx3*Jy1*Jz4 + Jx3*Jy2*Jz1 - Jx3*Jy2*Jz4 \ - Jx3*Jy4*Jz1 + Jx3*Jy4*Jz2 + Jx4*Jy1*Jz2 - Jx4*Jy1*Jz3 \ - Jx4*Jy2*Jz1 + Jx4*Jy2*Jz3 + Jx4*Jy3*Jz1 - Jx4*Jy3*Jz2 N = np.array([ [L1*(2*L1 - 1)], [L2*(2*L2 - 1)], [L3*(2*L3 - 1)], [L4*(2*L4 - 1)], [ 4*L1*L2], [ 4*L2*L3], [ 4*L1*L3], [ 4*L1*L4], [ 4*L2*L4], [ 4*L3*L4]]) M_small = N.dot(N.T) * det/6 * rho * w self.M += scatter_matrix(M_small, 3) return self.M class Hexa8(Element): ''' Eight point Hexahedron element. .. code:: eta 3----------2 |\ ^ |\ | \ | | \ | \ | | \ | 7------+---6 | | +-- |-- | -> xi 0---+---\--1 | \ | \ \ | \ | \ \ | \| zeta \| 4----------5 ''' name = 'Hexa8' def __init__(self, *args, **kwargs): ''' ''' super().__init__(*args, **kwargs) self.K = np.zeros((24,24)) self.f = np.zeros(24) self.M = np.zeros((24,24)) self.S = np.zeros((8,6)) self.E = np.zeros((8,6)) a = np.sqrt(1/3) self.gauss_points = ((-a, a, a, 1), ( a, a, a, 1), (-a, -a, a, 1), ( a, -a, a, 1), (-a, a, -a, 1), ( a, a, -a, 1), (-a, -a, -a, 1), ( a, -a, -a, 1),) b = (-np.sqrt(3) + 1)**2*(np.sqrt(3) + 1)/8 c = (-np.sqrt(3) + 1)**3/8 d = (np.sqrt(3) + 1)**3/8 e = (np.sqrt(3) + 1)**2*(-np.sqrt(3) + 1)/8 self.extrapolation_points = np.array([[b, c, e, b, e, b, d, e], [c, b, b, e, b, e, e, d], [b, e, c, b, e, d, b, e], [e, b, b, c, d, e, e, b], [e, b, d, e, b, c, e, b], [b, e, e, d, c, b, b, e], [e, d, b, e, b, e, c, b], [d, e, e, b, e, b, b, c]]) def _compute_tensors(self, X, u, t): X_mat = X.reshape(8, 3) u_mat = u.reshape(8, 3) self.K *= 0 self.f *= 0 self.S *= 0 self.E *= 0 for n_gauss, (xi, eta, zeta, w) in enumerate(self.gauss_points): dN_dxi = 1/8*np.array([ [-(-eta+1)*(-zeta+1), -(-xi+1)*(-zeta+1), -(-eta+1)*(-xi+1)], [ (-eta+1)*(-zeta+1), -(xi+1)*(-zeta+1), -(-eta+1)*(xi+1)], [ (eta+1)*(-zeta+1), (xi+1)*(-zeta+1), -(eta+1)*(xi+1)], [ -(eta+1)*(-zeta+1), (-xi+1)*(-zeta+1), -(eta+1)*(-xi+1)], [ -(-eta+1)*(zeta+1), -(-xi+1)*(zeta+1), (-eta+1)*(-xi+1)], [ (-eta+1)*(zeta+1), -(xi+1)*(zeta+1), (-eta+1)*(xi+1)], [ (eta+1)*(zeta+1), (xi+1)*(zeta+1), (eta+1)*(xi+1)], [ -(eta+1)*(zeta+1), (-xi+1)*(zeta+1), (eta+1)*(-xi+1)]]) dX_dxi = X_mat.T @ dN_dxi dxi_dX = np.linalg.inv(dX_dxi) det = np.linalg.det(dX_dxi) B0_tilde = dN_dxi @ dxi_dX H = u_mat.T @ B0_tilde F = H + np.eye(3) E = 1/2*(H + H.T + H.T @ H) S, S_v, C_SE = self.material.S_Sv_and_C(E) B0 = compute_B_matrix(B0_tilde, F) K_geo_small = B0_tilde @ S @ B0_tilde.T * det K_geo = scatter_matrix(K_geo_small, 3) K_mat = B0.T @ C_SE @ B0 * det self.K += (K_geo + K_mat) * w self.f += B0.T @ S_v * det * w # extrapolation of gauss element extrapol = self.extrapolation_points[:,n_gauss:n_gauss+1] self.S += extrapol @ np.array([[S[0,0], S[0,1], S[0,2], S[1,1], S[1,2], S[2,2]]]) self.E += extrapol @ np.array([[E[0,0], E[0,1], E[0,2], E[1,1], E[1,2], E[2,2]]]) return def _m_int(self, X, u, t=0): X_mat = X.reshape(8, 3) self.M *= 0 rho = self.material.rho for n_gauss, (xi, eta, zeta, w) in enumerate(self.gauss_points): N = np.array([ [(-eta + 1)*(-xi + 1)*(-zeta + 1)/8], [ (-eta + 1)*(xi + 1)*(-zeta + 1)/8], [ (eta + 1)*(xi + 1)*(-zeta + 1)/8], [ (eta + 1)*(-xi + 1)*(-zeta + 1)/8], [ (-eta + 1)*(-xi + 1)*(zeta + 1)/8], [ (-eta + 1)*(xi + 1)*(zeta + 1)/8], [ (eta + 1)*(xi + 1)*(zeta + 1)/8], [ (eta + 1)*(-xi + 1)*(zeta + 1)/8]]) dN_dxi = 1/8*np.array([ [-(-eta+1)*(-zeta+1), -(-xi+1)*(-zeta+1), -(-eta+1)*(-xi+1)], [ (-eta+1)*(-zeta+1), -(xi+1)*(-zeta+1), -(-eta+1)*(xi+1)], [ (eta+1)*(-zeta+1), (xi+1)*(-zeta+1), -(eta+1)*(xi+1)], [ -(eta+1)*(-zeta+1), (-xi+1)*(-zeta+1), -(eta+1)*(-xi+1)], [ -(-eta+1)*(zeta+1), -(-xi+1)*(zeta+1), (-eta+1)*(-xi+1)], [ (-eta+1)*(zeta+1), -(xi+1)*(zeta+1), (-eta+1)*(xi+1)], [ (eta+1)*(zeta+1), (xi+1)*(zeta+1), (eta+1)*(xi+1)], [ -(eta+1)*(zeta+1), (-xi+1)*(zeta+1), (eta+1)*(-xi+1)]]) dX_dxi = X_mat.T @ dN_dxi det = np.linalg.det(dX_dxi) M_small = N @ N.T * det * rho * w self.M += scatter_matrix(M_small, 3) return self.M class Hexa20(Element): ''' 20-node brick element. .. code:: # # v #3----------2 3----10----2 3----13----2 #|\ ^ |\ |\ |\ |\ |\ #| \ | | \ | 19 | 18 |15 24 | 14 #| \ | | \ 11 \ 9 \ 9 \ 20 11 \ #| 7------+---6 | 7----14+---6 | 7----19+---6 #| | +-- |-- | -> u | | | | |22 | 26 | 23| #0---+---\--1 | 0---+-8----1 | 0---+-8----1 | # \ | \ \ | \ 15 \ 13 \ 17 25 \ 18 # \ | \ \ | 16 | 17| 10 | 21 12| # \| w \| \| \| \| \| # 4----------5 4----12----5 4----16----5 ''' name = 'Hexa20' def __init__(self, *args, **kwargs): ''' ''' super().__init__(*args, **kwargs) self.K = np.zeros((60,60)) self.f = np.zeros(60) self.M = np.zeros((60,60)) self.S = np.zeros((20,6)) self.E = np.zeros((20,6)) a = np.sqrt(3/5) wa = 5/9 w0 = 8/9 self.gauss_points = ((-a, -a, -a, wa*wa*wa), ( 0, -a, -a, w0*wa*wa), ( a, -a, -a, wa*wa*wa), (-a, 0, -a, wa*w0*wa), ( 0, 0, -a, w0*w0*wa), ( a, 0, -a, wa*w0*wa), (-a, a, -a, wa*wa*wa), ( 0, a, -a, w0*wa*wa), ( a, a, -a, wa*wa*wa), (-a, -a, 0, wa*wa*w0), ( 0, -a, 0, w0*wa*w0), ( a, -a, 0, wa*wa*w0), (-a, 0, 0, wa*w0*w0), ( 0, 0, 0, w0*w0*w0), ( a, 0, 0, wa*w0*w0), (-a, a, 0, wa*wa*w0), ( 0, a, 0, w0*wa*w0), ( a, a, 0, wa*wa*w0), (-a, -a, a, wa*wa*wa), ( 0, -a, a, w0*wa*wa), ( a, -a, a, wa*wa*wa), (-a, 0, a, wa*w0*wa), ( 0, 0, a, w0*w0*wa), ( a, 0, a, wa*w0*wa), (-a, a, a, wa*wa*wa), ( 0, a, a, w0*wa*wa), ( a, a, a, wa*wa*wa),) b = 13*
np.sqrt(15)
numpy.sqrt
from unittest import TestCase from unittest.mock import patch import numpy as np from pytest import raises from aspire import __version__ from aspire.utils import get_full_version, powerset, utest_tolerance from aspire.utils.misc import gaussian_1d, gaussian_2d, gaussian_3d class UtilsTestCase(TestCase): def testGetFullVersion(self): """Test typical version string response is coherent with package.""" self.assertTrue(get_full_version().startswith(__version__)) @patch("os.path.isdir") def testGetFullVersionPath(self, d_mock): """Test not isdir case of get_full_version.""" d_mock.return_value = False self.assertTrue(get_full_version() == __version__) @patch("subprocess.check_output") def testGetFullVersionSrc(self, p_mock): """Test subprocess exception case of get_full_version.""" p_mock.side_effect = FileNotFoundError self.assertTrue(get_full_version() == __version__ + ".src") @patch("subprocess.check_output") def testGetFullVersionUnexpected(self, p_mock): """Test unexpected exception case of get_full_version.""" p_mock.side_effect = RuntimeError self.assertTrue(get_full_version() == __version__ + ".x") def testPowerset(self): ref = sorted([(), (1,), (2,), (3,), (1, 2), (1, 3), (2, 3), (1, 2, 3)]) s = range(1, 4) self.assertTrue(sorted(list(powerset(s))) == ref) def testGetTestTol(self): self.assertEqual(1e-8, utest_tolerance(np.float64)) self.assertEqual(1e-5, utest_tolerance(np.float32)) with raises(TypeError): utest_tolerance(int) def testGaussian2d(self): L = 100 mu_x, mu_y = 7, -3 s_x, s_y = 5, 6 g = gaussian_2d(L, x0=mu_x, y0=mu_y, sigma_x=s_x, sigma_y=s_y) # The normalized sum across an axis should correspond to a 1d gaussian with appropriate mu, sigma, peak. g_x = np.sum(g, axis=1) /
np.sum(g)
numpy.sum
""" """ import datetime import os # import sys import logging import numpy as np import scipy as sp import scipy.optimize # noqa import tqdm import h5py import zcode.inout as zio import zcode.math as zmath from . import spectra, radiation # , utils from . import PATH_DATA, MASS_EXTR, FEDD_EXTR, RADS_EXTR from . constants import MSOL, MELC, MPRT, SPLC, K_BLTZ, H_PLNK NUM = 10 np.seterr(divide='ignore', invalid='ignore', over='raise') # MASS_EXTR = [1e6, 5e10] # FEDD_EXTR = [1e-5, 1e-1] # RADS_EXTR = [3.0, 1e5] GRID_NAMES = ['mass', 'fedd', 'rmin', 'rmax'] ALPHA_VISC = 0.1 BETA_GP = 0.5 FRAC_ADV = 0.5 GAMMA_SH = (32 - 24*BETA_GP - 3*BETA_GP**2) / (24 - 21*BETA_GP) EPS = (5/3 - GAMMA_SH) / (GAMMA_SH - 1.0) EPS_PRIME = EPS / FRAC_ADV DELTA = MELC/MPRT GAE = np.sqrt(1.0 + 18.0 * np.square(ALPHA_VISC/(5.0 + 2*EPS_PRIME))) - 1.0 C1 = GAE * (5 + 2*EPS_PRIME) / (3 * np.square(ALPHA_VISC)) # C2 = np.sqrt(2 * EPS_PRIME * C1 / 3) C3 = 2 * C1 / 3 MEC2 = MELC * SPLC**2 S1 = 1.42e9 * np.sqrt(1 - BETA_GP) * np.sqrt(C3 / C1 / ALPHA_VISC) S3 = 1.05e-24 KB_OVER_MEC2 = K_BLTZ / MEC2 META = dict(ALPHA_VISC=ALPHA_VISC, BETA_GP=BETA_GP, FRAC_ADV=FRAC_ADV) def main(num=None, recreate=True): if num is None: num = NUM fname = grid_fname(num) exists = os.path.exists(fname) logging.warning("Grid for num={} exists: {} ({})".format(num, exists, fname)) logging.info("recreate: {}".format(recreate)) if not exists or recreate: grid, grid_names, grid_temps, grid_valid = get_temp_grid(num) save_grid(fname, grid, grid_names, grid_temps, grid_valid) return def get_interp(num=None): if num is None: num = NUM fname = grid_fname(num) grid, grid_names, grid_temps, grid_valid = load_grid(fname=fname) grid_temps[~grid_valid] = np.mean(grid_temps[grid_valid]) # mesh = np.meshgrid(*grid) # mesh = np.log10(mesh) mesh = [np.log10(gg) for gg in grid] grid_temps = np.log10(grid_temps) interp_ll = sp.interpolate.RegularGridInterpolator(mesh, grid_temps) def interp(xx): try: res = 10**interp_ll(np.log10(xx)) except ValueError: logging.error("ValueError for argument: '{}'".format(xx)) logging.error("ValueError for argument: log: '{}'".format(np.log10(xx))) for gg in interp_ll.grid: logging.error("\t{}".format(zmath.minmax(gg))) raise return res return interp def grid_fname(num): fname = "temp_grid_n{}.hdf5".format(num) fname = os.path.join(PATH_DATA, fname) return fname def save_grid(fname, grid, grid_names, grid_temps, grid_valid): fname = os.path.abspath(fname) with h5py.File(fname, 'w') as out: group = out.create_group('grid') for nn, vv in zip(grid_names, grid): group.create_dataset(nn, data=vv) group = out.create_group('parameters') for nn, vv in META.items(): group.create_dataset(nn, data=vv) out.create_dataset('temps', data=grid_temps) out.create_dataset('valid', data=grid_valid) logging.info("Saved to '{}' size '{}'".format(fname, zio.get_file_size(fname))) return def load_grid(*args, num=None, fname=None): if len(args): raise ValueError("Only passed kwargs to `load_grid()`!") if fname is None: if num is None: num = NUM fname = grid_fname(num) fname = os.path.abspath(fname) if not os.path.exists(fname): raise ValueError("fname '{}' does not exist!".format(fname)) with h5py.File(fname, 'r') as h5: grid_group = h5['grid'] # grid_names = list(grid_group.keys()) grid_names = [] grid = [] for nn in GRID_NAMES: grid.append(grid_group[nn][:]) grid_names.append(nn) grid_temps = h5['temps'][:] grid_valid = h5['valid'][:] return grid, grid_names, grid_temps, grid_valid def get_temp_grid(num, fix=True): grid_extr = [np.array(MASS_EXTR)*MSOL, FEDD_EXTR, RADS_EXTR, RADS_EXTR] grid_names = ['mass', 'fedd', 'rmin', 'rmax'] grid = [np.logspace(*np.log10(extr), num) for extr in grid_extr] shape = [num for ii in range(len(grid))] tot = np.product(shape) grid_temps = np.zeros(shape) grid_valid = np.ones(shape, dtype=bool) cnt = 0 beg = datetime.datetime.now() for idx in tqdm.tqdm(np.ndindex(*shape), total=tot): # print(idx) vals = [gg[ii] for gg, ii in zip(grid, idx)] if vals[2] >= vals[3]: grid_valid[idx] = False continue tt = solve_adaf_temp(*vals) if tt is not None: grid_temps[idx] = tt cnt += 1 end = datetime.datetime.now() dur = (end - beg) dur_per = dur.total_seconds()/cnt bads_nan = np.isnan(grid_temps) grid_temps = np.nan_to_num(grid_temps) bads = grid_valid & np.isclose(grid_temps, 0.0) logging.warning("Success on : {}".format(zmath.frac_str(grid_temps[grid_valid] > 0.0))) logging.warning("nan values: {}".format(zmath.frac_str(bads_nan))) logging.warning("Bad values: {}".format(zmath.frac_str(bads))) logging.warning("Done after {}, per iteration: {}".format(str(dur), dur_per)) if fix: grid_temps = interp_bad_grid_vals(grid, grid_temps, grid_valid) return grid, grid_names, grid_temps, grid_valid def solve_adaf_temp(mass, fedd, rmin, rmax, debug=False): msol = mass / MSOL lvl = logging.WARNING def heat_cool(temp): """Calculate heating and cooling rates for disk as a whole. """ nonlocal mass, fedd, rmin, rmax, msol alpha = ALPHA_VISC beta = BETA_GP eps_prime = EPS_PRIME delta = DELTA rmin = rmin rmax = rmax theta_e = KB_OVER_MEC2 * temp xm = spectra.xm_from_te(temp, msol, fedd) tau_es = 23.87 * fedd * (0.3 / alpha) * (0.5 / C1) * np.sqrt(3/rmin) mean_amp_a = 1.0 + 4.0 * theta_e + 16*np.square(theta_e) alpha_crit = - np.log(tau_es) / np.log(mean_amp_a) s2 = 1.19e-13 * xm # Viscous Heating # --------------- _ge = radiation._heat_func_g(theta_e) q1 = 1.2e38 * _ge * C3 * beta * msol * np.square(fedd) / np.square(alpha*C1) / rmin q2 = delta * 9.39e38 * eps_prime * C3 * msol * fedd / rmin heat_elc = q1 + q2 # Synchrotron # ----------- # Eq. 24 [Hz] f_p = S1 * s2 * np.sqrt(fedd/msol) * np.square(temp) * np.power(rmin, -1.25) lum_synch_peak = np.power(S1 * s2, 3) * S3 * np.power(rmin, -1.75) * np.sqrt(msol) lum_synch_peak *= np.power(fedd, 1.5) * np.power(temp, 7) / f_p # Eq. 26 power_synch = 5.3e35 * np.power(xm/1000, 3) * np.power(alpha/0.3, -1.5) power_synch *= np.power((1 - beta)/0.5, 1.5) * np.power(C1/0.5, -1.5) # Bremsstrahlung # -------------- # Eq. 29 power_brems = 4.78e34 * np.log(rmax/rmin) / np.square(alpha * C1) power_brems *= radiation._brems_fit_func_f(theta_e) * fedd * msol # Compton # ------- power_compt = lum_synch_peak * f_p / (1 - alpha_crit) power_compt *= (np.power(6.2e7 * (temp/1e9) / (f_p/1e12), 1 - alpha_crit) - 1.0) return heat_elc, power_synch, power_brems, power_compt def _func(logt): tt = np.power(10.0, logt) qv, qs, qb, qc = heat_cool(tt) rv = qv - (qs + qb + qc) return rv start_temps = [1e11, 1e10, 1e12, 1e9, 1e8] success = False for ii, t0 in enumerate(start_temps): try: logt = sp.optimize.newton(_func, np.log10(t0), tol=1e-4, maxiter=100) temp_e = np.power(10.0, logt) except (RuntimeError, FloatingPointError) as err: if debug: logging.warn("Trial '{}' (t={:.1e}) optimization failed: {}".format( ii, t0, str(err))) else: success = True break if success: # logging.log(lvl, "Success with `t0`={:.2e} ==> t={:.2e}".format(t0, temp_e)) pass else: err = ("Unable to find electron temperature!" "\nIf the eddington factor is larger than 1e-2, " "this may be expected!") if debug: logging.log(lvl, "FAILED to find electron temperature!") logging.log(lvl, "m = {:.2e}, f = {:.2e}".format(msol, fedd)) logging.log(lvl, err) # raise RuntimeError(err) return None qv, qs, qb, qc = heat_cool(temp_e) heat = qv cool = qs + qb + qc diff = np.fabs(heat - cool) / heat if diff < 1e-2: if debug: logging.log(lvl, "Heating vs. cooling frac-diff: {:.2e}".format(diff)) else: if debug: err = "Electron temperature seems inconsistent (Te = {:.2e})!".format(temp_e) err += "\n\tm: {:.2e}, f: {:.2e}".format(msol, fedd) err += "\n\tHeating: {:.2e}, Cooling: {:.2e}, diff: {:.4e}".format(heat, cool, diff) err += "\n\tThis may mean there is an input error (e.g. mdot may be too large... or small?)." logging.log(lvl, err) return None return temp_e def interp_bad_grid_vals(grid, grid_temps, grid_valid): grid_temps = np.copy(grid_temps) bads = grid_valid & np.isclose(grid_temps, 0.0) shape = [len(gg) for gg in grid] logging.warning("Fixing bad values: {}".format(zmath.frac_str(bads))) neighbors = [] good_neighbors = [] bads_inds = np.array(np.where(bads)).T for bad in tqdm.tqdm(bads_inds): nbs = [] # print(bad) cnt = 0 for dim in range(4): for side in [-1, +1]: test = [bb for bb in bad] test[dim] += side if test[dim] < 0 or test[dim] >= shape[dim]: continue test = tuple(test) # print("\t", test) # print("\t", temps[test]) nbs.append(test) if grid_temps[test] > 0.0: cnt += 1 neighbors.append(nbs) good_neighbors.append(cnt) num_nbs = [len(nbs) for nbs in neighbors] logging.warning("All neighbors: {}".format(zmath.stats_str(num_nbs))) logging.warning("Good neighbors: {}".format(zmath.stats_str(good_neighbors))) goods = np.zeros(len(neighbors)) MAX_TRIES = 10 still_bad = list(np.argsort(good_neighbors)[::-1]) tries = 0 while len(still_bad) > 0 and tries < MAX_TRIES: keep_bad = [] for kk, ii in enumerate(still_bad): values = np.zeros(num_nbs[ii]) for jj, nbr in enumerate(neighbors[ii]): values[jj] = grid_temps[nbr] cnt = np.count_nonzero(values) if cnt == 0: keep_bad.append(kk) continue new = np.sum(np.log10(values[values > 0])) / cnt loc = tuple(bads_inds[ii]) # print("\t", loc, new, cnt) grid_temps[loc] = 10**new goods[ii] = cnt still_bad = [still_bad[kk] for kk in keep_bad] num_still = len(still_bad) logging.warning("Try: {}, still_bad: {}".format(tries, num_still)) if (tries+1 >= MAX_TRIES) and (num_still > 0): logging.error("After {} tries, still {} bad!!".format(tries, num_still)) tries += 1 logging.warning("Filled neighbors: {}".format(zmath.stats_str(goods))) logging.warning("Full temps array: {}".format(zmath.stats_str(grid_temps[grid_valid]))) return grid_temps def plot_grid(grid, grid_names, temps, valid, interp=None): import matplotlib.pyplot as plt import zcode.plot as zplot extr = zmath.minmax(temps, filter='>') smap = zplot.colormap(extr, 'viridis') # bads = valid & np.isclose(temps, 0.0) num = len(grid) fig, axes = plt.subplots(figsize=[14, 14], nrows=num, ncols=num) plt.subplots_adjust(hspace=0.4, wspace=0.4) def_idx = [-4, -4, 4, -4] for (ii, jj), ax in np.ndenumerate(axes): if ii < jj: ax.set_visible(False) continue ax.set(xscale='log', yscale='log') xx = grid[jj] if ii == jj: # print(grid_names[ii], zmath.minmax(grid[ii], filter='>')) # idx = list(range(num)) # idx.pop(ii) # idx = tuple(idx) # vals = np.mean(temps, axis=idx) idx = [slice(None) if aa == ii else def_idx[aa] for aa in range(num)] vals = temps[tuple(idx)] ax.plot(xx, vals, 'k-') if interp is not None: num_test = 10 test = [np.ones(num_test)*grid[aa][def_idx[aa]] for aa in range(num)] test[ii] = zmath.spacing(grid[ii], 'log', num_test) test_vals = [interp(tt) for tt in np.array(test).T] ax.plot(test[ii], test_vals, 'r--') # bad_vals = np.count_nonzero(bads, axis=idx) # tw = ax.twinx() # tw.plot(xx, bad_vals, 'r--') else: # print(ii, jj) # print("\t", ii, grid_names[ii], zmath.minmax(grid[ii], filter='>')) # print("\t", jj, grid_names[jj], zmath.minmax(grid[jj], filter='>')) # idx = [0, 1, 2, 3] # idx.pop(np.max([ii, jj])) # idx.pop(np.min([ii, jj])) # vals = np.mean(temps, axis=tuple(idx)) # idx = [slice(None) if aa in [ii, jj] else num//2 for aa in range(num)] idx = [slice(None) if aa in [ii, jj] else def_idx[aa] for aa in range(num)] vals = temps[tuple(idx)] if len(vals) == 0: continue yy = grid[ii] xx, yy = np.meshgrid(xx, yy, indexing='ij') ax.pcolor(xx, yy, vals, cmap=smap.cmap, norm=smap.norm) if np.count_nonzero(vals > 0.0) == 0: continue tit = "{:.1e}, {:.1e}".format(*zmath.minmax(vals, filter='>')) ax.set_title(tit, size=10) # bad_vals = np.count_nonzero(bads, axis=tuple(idx)) # idx = (bad_vals > 0.0) # aa = xx[idx] # bb = yy[idx] # cc = bad_vals[idx] # ax.scatter(aa, bb, s=2*cc**2, color='0.5', alpha=0.5) # ax.scatter(aa, bb, s=cc**2, color='r') if interp is not None: for kk in range(10): idx = (vals > 0.0) x0 = 10**np.random.uniform(*zmath.minmax(np.log10(xx[idx]))) y0 = 10**np.random.uniform(*zmath.minmax(np.log10(yy[idx]))) # y0 = np.random.choice(yy[idx]) temp = [grid[ll][def_idx[ll]] for ll in range(num)] temp[ii] = y0 temp[jj] = x0 if temp[2] >= temp[3]: temp[2] = 3.1 iv = interp(temp) if not np.isfinite(iv) or np.isclose(iv, 0.0): print("\nBAD") print(temp) print(iv) for kk in range(num): if def_idx[kk] == 0: temp[kk] = temp[kk] * 1.11 elif def_idx[kk] == -1: temp[kk] = 0.99 * temp[kk] iv = interp(temp) print("\t", temp) print("\t", iv) cc = smap.to_rgba(iv) ss = 20 ax.scatter(temp[jj], temp[ii], color='0.5', s=2*ss) ax.scatter(temp[jj], temp[ii], color=cc, s=ss) if ii == num-1: ax.set_xlabel(grid_names[jj]) if jj == 0 and ii != 0: ax.set_ylabel(grid_names[ii]) return fig class Fast_Mahadevan96: def __init__(self, mass, fedd, rmin, rmax, temp_e=None, interp=None): """ """ self.mass = mass # Mass in units of solar=masses self.msol = mass/MSOL self.fedd = fedd self.rmin = rmin self.rmax = rmax if temp_e is None: if interp is None: interp = get_interp() temp_e = interp([mass, fedd, rmin, rmax]) self.temp_e = temp_e xm_e = spectra.xm_from_te(temp_e, self.msol, fedd) self.s2 = 1.19e-13 * xm_e theta_e = radiation.dimensionless_temperature_theta(temp_e, MELC) # Eq. 31 tau_es = 23.87 * fedd * (0.3 / ALPHA_VISC) * (0.5 / C1) * np.sqrt(3/rmin) # Eq. 32 mean_amp_a = 1.0 + 4.0 * theta_e + 16*np.square(theta_e) # Eq. 34 self.alpha_crit = - np.log(tau_es) / np.log(mean_amp_a) return def spectrum(self, freqs): synch = self._calc_spectrum_synch(freqs) brems = self._calc_spectrum_brems(freqs) compt = self._calc_spectrum_compt(freqs) spectrum = synch + brems + compt return spectrum def _calc_spectrum_synch(self, freqs): """Mahadevan 1996 - Eq. 25 Cutoff above peak frequency (i.e. ignore exponential portion). Ignore low-frequency transition to steeper (22/13 slope) from rmax. """ msol = self.msol fedd = self.fedd scalar = np.isscalar(freqs) freqs = np.atleast_1d(freqs) lnu = S3 * np.power(S1*self.s2, 1.6) lnu *= np.power(msol, 1.2) * np.power(fedd, 0.8) lnu *= np.power(self.temp_e, 4.2) * np.power(freqs, 0.4) nu_p = self._freq_synch_peak(self.temp_e, msol, fedd) lnu[freqs > nu_p] = 0.0 if scalar: lnu = np.squeeze(lnu) return lnu def _calc_spectrum_brems(self, freqs): """Mahadevan 1996 - Eq. 30 """ msol = self.msol fedd = self.fedd temp = self.temp_e const = 2.29e24 # erg/s/Hz scalar = np.isscalar(freqs) freqs = np.atleast_1d(freqs) t1 = np.log(self.rmax/self.rmin) / np.square(ALPHA_VISC * C1) t2 = np.exp(-H_PLNK*freqs / (K_BLTZ * temp)) * msol * np.square(fedd) / temp fe = radiation._brems_fit_func_f(temp) lbrems = const * t1 * fe * t2 if scalar: lbrems = np.squeeze(lbrems) return lbrems def _calc_spectrum_compt(self, freqs): """Compton Scattering spectrum from upscattering of Synchrotron photons. Mahadevan 1996 - Eq. 38 """ fedd = self.fedd temp = self.temp_e scalar = np.isscalar(freqs) freqs =
np.atleast_1d(freqs)
numpy.atleast_1d
import json import os import time import warnings from abc import ABC import numpy as np import tensorflow.keras as tfk from astroNN.config import MULTIPROCESS_FLAG from astroNN.config import _astroNN_MODEL_NAME from astroNN.datasets import H5Loader from astroNN.models.base_master_nn import NeuralNetMaster from astroNN.nn.callbacks import VirutalCSVLogger from astroNN.nn.layers import FastMCInference from astroNN.nn.losses import mean_absolute_error, mean_error, mean_squared_error from astroNN.nn.metrics import categorical_accuracy, binary_accuracy from astroNN.nn.numpy import sigmoid from astroNN.nn.utilities import Normalizer from astroNN.nn.utilities.generator import GeneratorMaster from astroNN.shared.custom_warnings import deprecated from astroNN.shared.nn_tools import gpu_availability from astroNN.shared.dict_tools import dict_np_to_dict_list, list_to_dict from astroNN.nn.losses import bayesian_binary_crossentropy_wrapper, bayesian_binary_crossentropy_var_wrapper from astroNN.nn.losses import bayesian_categorical_crossentropy_wrapper, bayesian_categorical_crossentropy_var_wrapper from astroNN.nn.losses import mse_lin_wrapper, mse_var_wrapper from sklearn.model_selection import train_test_split import tensorflow as tf from tensorflow.python.keras.engine import data_adapter regularizers = tfk.regularizers ReduceLROnPlateau = tfk.callbacks.ReduceLROnPlateau Adam = tfk.optimizers.Adam class BayesianCNNDataGenerator(GeneratorMaster): """ To generate data to NN :param batch_size: batch size :type batch_size: int :param shuffle: Whether to shuffle batches or not :type shuffle: bool :param data: List of data to NN :type data: list :param manual_reset: Whether need to reset the generator manually, usually it is handled by tensorflow :type manual_reset: bool :History: | 2017-Dec-02 - Written - <NAME> (University of Toronto) | 2019-Feb-17 - Updated - <NAME> (University of Toronto) """ def __init__(self, batch_size, shuffle, steps_per_epoch, data, manual_reset=False): super().__init__(batch_size=batch_size, shuffle=shuffle, steps_per_epoch=steps_per_epoch, data=data, manual_reset=manual_reset) self.inputs = self.data[0] self.labels = self.data[1] # initial idx self.idx_list = self._get_exploration_order(range(self.inputs['input'].shape[0])) def _data_generation(self, inputs, labels, idx_list_temp): x = self.input_d_checking(inputs, idx_list_temp) x.update({"labels_err": np.squeeze(x["labels_err"])}) y = {} for name in labels.keys(): y.update({name: labels[name][idx_list_temp]}) return x, y def __getitem__(self, index): x, y = self._data_generation(self.inputs, self.labels, self.idx_list[index * self.batch_size: (index + 1) * self.batch_size]) return x, y def on_epoch_end(self): # shuffle the list when epoch ends for the next epoch self.idx_list = self._get_exploration_order(range(self.inputs['input'].shape[0])) class BayesianCNNPredDataGenerator(GeneratorMaster): """ To generate data to NN for prediction :param batch_size: batch size :type batch_size: int :param shuffle: Whether to shuffle batches or not :type shuffle: bool :param data: List of data to NN :type data: list :param manual_reset: Whether need to reset the generator manually, usually it is handled by tensorflow :type manual_reset: bool :History: | 2017-Dec-02 - Written - <NAME> (University of Toronto) | 2019-Feb-17 - Updated - <NAME> (University of Toronto) """ def __init__(self, batch_size, shuffle, steps_per_epoch, data, manual_reset=False): super().__init__(batch_size=batch_size, shuffle=shuffle, steps_per_epoch=steps_per_epoch, data=data, manual_reset=manual_reset) self.inputs = self.data[0] # initial idx self.idx_list = self._get_exploration_order(range(self.inputs[list(self.inputs.keys())[0]].shape[0])) self.current_idx = 0 def _data_generation(self, inputs, idx_list_temp): # Generate data x = self.input_d_checking(inputs, idx_list_temp) return x def __getitem__(self, index): x = self._data_generation(self.inputs, self.idx_list[index * self.batch_size: (index + 1) * self.batch_size]) return x def on_epoch_end(self): # shuffle the list when epoch ends for the next epoch self.idx_list = self._get_exploration_order(range(self.inputs[list(self.inputs.keys())[0]].shape[0])) class BayesianCNNBase(NeuralNetMaster, ABC): """ Top-level class for a Bayesian convolutional neural network :History: 2018-Jan-06 - Written - <NAME> (University of Toronto) """ def __init__(self): super().__init__() self.name = 'Bayesian Convolutional Neural Network' self._model_type = 'BCNN' self.initializer = None self.activation = None self._last_layer_activation = None self.num_filters = None self.filter_len = None self.pool_length = None self.num_hidden = None self.reduce_lr_epsilon = None self.reduce_lr_min = None self.reduce_lr_patience = None self.l1 = None self.l2 = None self.maxnorm = None self.inv_model_precision = None # inverse model precision self.dropout_rate = 0.2 self.length_scale = 3 # prior length scale self.mc_num = 100 # increased to 100 due to high performance VI on GPU implemented on 14 April 2018 (Henry) self.val_size = 0.1 self.disable_dropout = False self.output_loss = None self.variance_loss = None self.input_norm_mode = 1 self.labels_norm_mode = 2 self.keras_model_predict = None def pre_training_checklist_child(self, input_data, labels): input_data, labels = self.pre_training_checklist_master(input_data, labels) # check if exists (existing means the model has already been trained (e.g. fine-tuning), so we do not need calculate mean/std again) if self.input_normalizer is None: self.input_normalizer = Normalizer(mode=self.input_norm_mode) self.labels_normalizer = Normalizer(mode=self.labels_norm_mode) norm_data = self.input_normalizer.normalize(input_data) self.input_mean, self.input_std = self.input_normalizer.mean_labels, self.input_normalizer.std_labels norm_labels = self.labels_normalizer.normalize(labels) self.labels_mean, self.labels_std = self.labels_normalizer.mean_labels, self.labels_normalizer.std_labels else: norm_data = self.input_normalizer.normalize(input_data, calc=False) norm_labels = self.labels_normalizer.normalize(labels, calc=False) # No need to care about Magic number as loss function looks for magic num in y_true only norm_data.update({"input_err": (input_data['input_err'] / self.input_std['input']), "labels_err": input_data['labels_err'] / self.labels_std['output']}) norm_labels.update({"variance_output": norm_labels['output']}) if self.keras_model is None: # only compile if there is no keras_model, e.g. fine-tuning does not required self.compile() self.train_idx, self.val_idx = train_test_split(np.arange(self.num_train + self.val_num), test_size=self.val_size) norm_data_training = {} norm_data_val = {} norm_labels_training = {} norm_labels_val = {} for name in norm_data.keys(): norm_data_training.update({name: norm_data[name][self.train_idx]}) norm_data_val.update({name: norm_data[name][self.val_idx]}) for name in norm_labels.keys(): norm_labels_training.update({name: norm_labels[name][self.train_idx]}) norm_labels_val.update({name: norm_labels[name][self.val_idx]}) self.inv_model_precision = (2 * self.num_train * self.l2) / (self.length_scale ** 2 * (1 - self.dropout_rate)) self.training_generator = BayesianCNNDataGenerator(batch_size=self.batch_size, shuffle=True, steps_per_epoch=self.num_train // self.batch_size, data=[norm_data_training, norm_labels_training], manual_reset=False) val_batchsize = self.batch_size if len(self.val_idx) > self.batch_size else len(self.val_idx) self.validation_generator = BayesianCNNDataGenerator(batch_size=val_batchsize, shuffle=False, steps_per_epoch=max(self.val_num // self.batch_size, 1), data=[norm_data_val, norm_labels_val], manual_reset=True) return norm_data, norm_labels def compile(self, optimizer=None, loss=None, metrics=None, weighted_metrics=None, loss_weights=None, sample_weight_mode=None): if optimizer is not None: self.optimizer = optimizer elif self.optimizer is None or self.optimizer == 'adam': self.optimizer = Adam(lr=self.lr, beta_1=self.beta_1, beta_2=self.beta_2, epsilon=self.optimizer_epsilon, decay=0.0) if metrics is not None: self.metrics = metrics if self.task == 'regression': if self._last_layer_activation is None: self._last_layer_activation = 'linear' elif self.task == 'classification': if self._last_layer_activation is None: self._last_layer_activation = 'softmax' elif self.task == 'binary_classification': if self._last_layer_activation is None: self._last_layer_activation = 'sigmoid' else: raise RuntimeError('Only "regression", "classification" and "binary_classification" are supported') self.keras_model, self.keras_model_predict, self.output_loss, self.variance_loss = self.model() # all mse losss as dummy lose if self.task == 'regression': self.metrics = [mean_absolute_error, mean_error] if not self.metrics else self.metrics self.keras_model.compile(loss={'output': mean_squared_error, 'variance_output': mean_squared_error}, optimizer=self.optimizer, metrics={'output': self.metrics}, weighted_metrics=weighted_metrics, loss_weights={'output': .5, 'variance_output': .5} if not loss_weights else loss_weights, sample_weight_mode=sample_weight_mode) elif self.task == 'classification': self.metrics = [categorical_accuracy] if not self.metrics else self.metrics self.keras_model.compile(loss={'output': mean_squared_error, 'variance_output': mean_squared_error}, optimizer=self.optimizer, metrics={'output': self.metrics}, weighted_metrics=weighted_metrics, loss_weights={'output': .5, 'variance_output': .5} if not loss_weights else loss_weights, sample_weight_mode=sample_weight_mode) elif self.task == 'binary_classification': self.metrics = [binary_accuracy] if not self.metrics else self.metrics self.keras_model.compile(loss={'output': mean_squared_error, 'variance_output': mean_squared_error}, optimizer=self.optimizer, metrics={'output': self.metrics}, weighted_metrics=weighted_metrics, loss_weights={'output': .5, 'variance_output': .5} if not loss_weights else loss_weights, sample_weight_mode=sample_weight_mode) # inject custom training step if needed try: self.custom_train_step() except NotImplementedError: pass except TypeError: self.keras_model.train_step = self.custom_train_step return None def custom_train_step(self, data): """ Custom training logic :param data: :return: """ data = data_adapter.expand_1d(data) x, y, sample_weight = data_adapter.unpack_x_y_sample_weight(data) with tf.python.eager.backprop.GradientTape() as tape: y_pred = self.keras_model(x, training=True) loss = self.keras_model.compiled_loss(y, y_pred, sample_weight, regularization_losses=self.keras_model.losses) if self.task == 'regression': variance_loss = mse_var_wrapper(y_pred[0], x['labels_err']) output_loss = mse_lin_wrapper(y_pred[1], x['labels_err']) elif self.task == 'classification': output_loss = bayesian_categorical_crossentropy_wrapper(y_pred[1]) variance_loss = bayesian_categorical_crossentropy_var_wrapper(y_pred[0]) elif self.task == 'binary_classification': output_loss = bayesian_binary_crossentropy_wrapper(y_pred[1]) variance_loss = bayesian_binary_crossentropy_var_wrapper(y_pred[0]) else: raise RuntimeError('Only "regression", "classification" and "binary_classification" are supported') loss = output_loss(y['output'], y_pred[0]) + variance_loss(y['variance_output'], y_pred[1]) # apply gradient here tf.python.keras.engine.training._minimize(self.keras_model.distribute_strategy, tape, self.keras_model.optimizer, loss, self.keras_model.trainable_variables) self.keras_model.compiled_metrics.update_state(y, y_pred, sample_weight) return {m.name: m.result() for m in self.keras_model.metrics} def train(self, input_data, labels, inputs_err=None, labels_err=None): """ Train a Bayesian neural network :param input_data: Data to be trained with neural network :type input_data: ndarray :param labels: Labels to be trained with neural network :type labels: ndarray :param inputs_err: Error for input_data (if any), same shape with input_data. :type inputs_err: Union([NoneType, ndarray]) :param labels_err: Labels error (if any) :type labels_err: Union([NoneType, ndarray]) :return: None :rtype: NoneType :History: | 2018-Jan-06 - Written - <NAME> (University of Toronto) | 2018-Apr-12 - Updated - <NAME> (University of Toronto) """ if inputs_err is None: inputs_err = np.zeros_like(input_data) if labels_err is None: labels_err = np.zeros_like(labels) # TODO: allow named inputs too?? input_data = {"input": input_data, "input_err": inputs_err, "labels_err": labels_err} labels = {"output": labels, "variance_output": labels} # Call the checklist to create astroNN folder and save parameters input_data, labels = self.pre_training_checklist_child(input_data, labels) reduce_lr = ReduceLROnPlateau(monitor='val_output_loss', factor=0.5, min_delta=self.reduce_lr_epsilon, patience=self.reduce_lr_patience, min_lr=self.reduce_lr_min, mode='min', verbose=2) self.virtual_cvslogger = VirutalCSVLogger() self.__callbacks = [reduce_lr, self.virtual_cvslogger] # default must have unchangeable callbacks if self.callbacks is not None: if isinstance(self.callbacks, list): self.__callbacks.extend(self.callbacks) else: self.__callbacks.append(self.callbacks) start_time = time.time() self.history = self.keras_model.fit(self.training_generator, validation_data=self.validation_generator, epochs=self.max_epochs, verbose=self.verbose, workers=os.cpu_count(), callbacks=self.__callbacks, use_multiprocessing=MULTIPROCESS_FLAG) print(f'Completed Training, {(time.time() - start_time):.{2}f}s in total') if self.autosave is True: # Call the post training checklist to save parameters self.save() return None def train_on_batch(self, input_data, labels, inputs_err=None, labels_err=None): """ Train a Bayesian neural network by running a single gradient update on all of your data, suitable for fine-tuning :param input_data: Data to be trained with neural network :type input_data: ndarray :param labels: Labels to be trained with neural network :type labels: ndarray :param inputs_err: Error for input_data (if any), same shape with input_data. :type inputs_err: Union([NoneType, ndarray]) :param labels_err: Labels error (if any) :type labels_err: Union([NoneType, ndarray]) :return: None :rtype: NoneType :History: | 2018-Aug-25 - Written - <NAME> (University of Toronto) """ self.has_model_check() if inputs_err is None: inputs_err = np.zeros_like(input_data) if labels_err is None: labels_err = np.zeros_like(labels) input_data = {"input": input_data, "input_err": inputs_err, "labels_err": labels_err} labels = {"output": labels, "variance_output": labels} # check if exists (existing means the model has already been trained (e.g. fine-tuning), so we do not need calculate mean/std again) if self.input_normalizer is None: self.input_normalizer = Normalizer(mode=self.input_norm_mode) self.labels_normalizer = Normalizer(mode=self.labels_norm_mode) norm_data = self.input_normalizer.normalize(input_data) self.input_mean, self.input_std = self.input_normalizer.mean_labels, self.input_normalizer.std_labels norm_labels = self.labels_normalizer.normalize(labels) self.labels_mean, self.labels_std = self.labels_normalizer.mean_labels, self.labels_normalizer.std_labels else: norm_data = self.input_normalizer.normalize(input_data, calc=False) norm_labels = self.labels_normalizer.normalize(labels, calc=False) # No need to care about Magic number as loss function looks for magic num in y_true only norm_data.update({"input_err": (input_data['input_err'] / self.input_std['input']), "labels_err": input_data['labels_err'] / self.labels_std['output']}) norm_labels.update({"variance_output": norm_labels['output']}) start_time = time.time() fit_generator = BayesianCNNDataGenerator(batch_size=input_data['input'].shape[0], shuffle=False, steps_per_epoch=1, data=[norm_data, norm_labels]) score = self.keras_model.fit(fit_generator, epochs=1, verbose=self.verbose, workers=os.cpu_count(), use_multiprocessing=MULTIPROCESS_FLAG) print(f'Completed Training on Batch, {(time.time() - start_time):.{2}f}s in total') return None def post_training_checklist_child(self): self.keras_model.save(self.fullfilepath + _astroNN_MODEL_NAME) print(_astroNN_MODEL_NAME + f' saved to {(self.fullfilepath + _astroNN_MODEL_NAME)}') self.hyper_txt.write(f"Dropout Rate: {self.dropout_rate} \n") self.hyper_txt.flush() self.hyper_txt.close() data = {'id': self.__class__.__name__ if self._model_identifier is None else self._model_identifier, 'pool_length': self.pool_length, 'filterlen': self.filter_len, 'filternum': self.num_filters, 'hidden': self.num_hidden, 'input': self._input_shape, 'labels': self._labels_shape, 'task': self.task, 'last_layer_activation': self._last_layer_activation, 'activation': self.activation, 'input_mean': dict_np_to_dict_list(self.input_mean), 'inv_tau': self.inv_model_precision, 'length_scale': self.length_scale, 'labels_mean': dict_np_to_dict_list(self.labels_mean), 'input_std': dict_np_to_dict_list(self.input_std), 'labels_std': dict_np_to_dict_list(self.labels_std), 'valsize': self.val_size, 'targetname': self.targetname, 'dropout_rate': self.dropout_rate, 'l1': self.l1, 'l2': self.l2, 'maxnorm': self.maxnorm, 'input_norm_mode': self.input_normalizer.normalization_mode, 'labels_norm_mode': self.labels_normalizer.normalization_mode, 'input_names': self.input_names, 'output_names': self.output_names, 'batch_size': self.batch_size} with open(self.fullfilepath + '/astroNN_model_parameter.json', 'w') as f: json.dump(data, f, indent=4, sort_keys=True) def test(self, input_data, inputs_err=None): """ Test model, High performance version designed for fast variational inference on GPU :param input_data: Data to be inferred with neural network :type input_data: ndarray :param inputs_err: Error for input_data, same shape with input_data. :type inputs_err: Union([NoneType, ndarray]) :return: prediction and prediction uncertainty :History: | 2018-Jan-06 - Written - <NAME> (University of Toronto) | 2018-Apr-12 - Updated - <NAME> (University of Toronto) """ self.has_model_check() if gpu_availability() is False and self.mc_num > 25: warnings.warn(f'You are using CPU version Tensorflow, doing {self.mc_num} times Monte Carlo Inference can ' f'potentially be very slow! \n ' f'A possible fix is to decrease the mc_num parameter of the model to do less MC Inference \n' f'This is just a warning, and will not shown if mc_num < 25 on CPU') if self.mc_num < 2: raise AttributeError("mc_num cannot be smaller than 2") # if no error array then just zeros if inputs_err is None: inputs_err =
np.zeros_like(input_data)
numpy.zeros_like
# This module has been generated automatically from space group information # obtained from the Computational Crystallography Toolbox # """ Space groups This module contains a list of all the 230 space groups that can occur in a crystal. The variable space_groups contains a dictionary that maps space group numbers and space group names to the corresponding space group objects. .. moduleauthor:: <NAME> <<EMAIL>> """ #----------------------------------------------------------------------------- # Copyright (C) 2013 The Mosaic Development Team # # Distributed under the terms of the BSD License. The full license is in # the file LICENSE.txt, distributed as part of this software. #----------------------------------------------------------------------------- import numpy as N class SpaceGroup(object): """ Space group All possible space group objects are created in this module. Other modules should access these objects through the dictionary space_groups rather than create their own space group objects. """ def __init__(self, number, symbol, transformations): """ :param number: the number assigned to the space group by international convention :type number: int :param symbol: the Hermann-Mauguin space-group symbol as used in PDB and mmCIF files :type symbol: str :param transformations: a list of space group transformations, each consisting of a tuple of three integer arrays (rot, tn, td), where rot is the rotation matrix and tn/td are the numerator and denominator of the translation vector. The transformations are defined in fractional coordinates. :type transformations: list """ self.number = number self.symbol = symbol self.transformations = transformations self.transposed_rotations = N.array([N.transpose(t[0]) for t in transformations]) self.phase_factors = N.exp(N.array([(-2j*N.pi*t[1])/t[2] for t in transformations])) def __repr__(self): return "SpaceGroup(%d, %s)" % (self.number, repr(self.symbol)) def __len__(self): """ :return: the number of space group transformations :rtype: int """ return len(self.transformations) def symmetryEquivalentMillerIndices(self, hkl): """ :param hkl: a set of Miller indices :type hkl: Scientific.N.array_type :return: a tuple (miller_indices, phase_factor) of two arrays of length equal to the number of space group transformations. miller_indices contains the Miller indices of each reflection equivalent by symmetry to the reflection hkl (including hkl itself as the first element). phase_factor contains the phase factors that must be applied to the structure factor of reflection hkl to obtain the structure factor of the symmetry equivalent reflection. :rtype: tuple """ hkls = N.dot(self.transposed_rotations, hkl) p = N.multiply.reduce(self.phase_factors**hkl, -1) return hkls, p space_groups = {} transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(1, 'P 1', transformations) space_groups[1] = sg space_groups['P 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(2, 'P -1', transformations) space_groups[2] = sg space_groups['P -1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(3, 'P 1 2 1', transformations) space_groups[3] = sg space_groups['P 1 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(4, 'P 1 21 1', transformations) space_groups[4] = sg space_groups['P 1 21 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(5, 'C 1 2 1', transformations) space_groups[5] = sg space_groups['C 1 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(6, 'P 1 m 1', transformations) space_groups[6] = sg space_groups['P 1 m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(7, 'P 1 c 1', transformations) space_groups[7] = sg space_groups['P 1 c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(8, 'C 1 m 1', transformations) space_groups[8] = sg space_groups['C 1 m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(9, 'C 1 c 1', transformations) space_groups[9] = sg space_groups['C 1 c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(10, 'P 1 2/m 1', transformations) space_groups[10] = sg space_groups['P 1 2/m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(11, 'P 1 21/m 1', transformations) space_groups[11] = sg space_groups['P 1 21/m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(12, 'C 1 2/m 1', transformations) space_groups[12] = sg space_groups['C 1 2/m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(13, 'P 1 2/c 1', transformations) space_groups[13] = sg space_groups['P 1 2/c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(14, 'P 1 21/c 1', transformations) space_groups[14] = sg space_groups['P 1 21/c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(15, 'C 1 2/c 1', transformations) space_groups[15] = sg space_groups['C 1 2/c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(16, 'P 2 2 2', transformations) space_groups[16] = sg space_groups['P 2 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(17, 'P 2 2 21', transformations) space_groups[17] = sg space_groups['P 2 2 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(18, 'P 21 21 2', transformations) space_groups[18] = sg space_groups['P 21 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(19, 'P 21 21 21', transformations) space_groups[19] = sg space_groups['P 21 21 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(20, 'C 2 2 21', transformations) space_groups[20] = sg space_groups['C 2 2 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(21, 'C 2 2 2', transformations) space_groups[21] = sg space_groups['C 2 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(22, 'F 2 2 2', transformations) space_groups[22] = sg space_groups['F 2 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(23, 'I 2 2 2', transformations) space_groups[23] = sg space_groups['I 2 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(24, 'I 21 21 21', transformations) space_groups[24] = sg space_groups['I 21 21 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(25, 'P m m 2', transformations) space_groups[25] = sg space_groups['P m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(26, 'P m c 21', transformations) space_groups[26] = sg space_groups['P m c 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(27, 'P c c 2', transformations) space_groups[27] = sg space_groups['P c c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(28, 'P m a 2', transformations) space_groups[28] = sg space_groups['P m a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(29, 'P c a 21', transformations) space_groups[29] = sg space_groups['P c a 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(30, 'P n c 2', transformations) space_groups[30] = sg space_groups['P n c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(31, 'P m n 21', transformations) space_groups[31] = sg space_groups['P m n 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(32, 'P b a 2', transformations) space_groups[32] = sg space_groups['P b a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(33, 'P n a 21', transformations) space_groups[33] = sg space_groups['P n a 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(34, 'P n n 2', transformations) space_groups[34] = sg space_groups['P n n 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(35, 'C m m 2', transformations) space_groups[35] = sg space_groups['C m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(36, 'C m c 21', transformations) space_groups[36] = sg space_groups['C m c 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(37, 'C c c 2', transformations) space_groups[37] = sg space_groups['C c c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(38, 'A m m 2', transformations) space_groups[38] = sg space_groups['A m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(39, 'A b m 2', transformations) space_groups[39] = sg space_groups['A b m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(40, 'A m a 2', transformations) space_groups[40] = sg space_groups['A m a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(41, 'A b a 2', transformations) space_groups[41] = sg space_groups['A b a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(42, 'F m m 2', transformations) space_groups[42] = sg space_groups['F m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(43, 'F d d 2', transformations) space_groups[43] = sg space_groups['F d d 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(44, 'I m m 2', transformations) space_groups[44] = sg space_groups['I m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(45, 'I b a 2', transformations) space_groups[45] = sg space_groups['I b a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(46, 'I m a 2', transformations) space_groups[46] = sg space_groups['I m a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(47, 'P m m m', transformations) space_groups[47] = sg space_groups['P m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(48, 'P n n n :2', transformations) space_groups[48] = sg space_groups['P n n n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(49, 'P c c m', transformations) space_groups[49] = sg space_groups['P c c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(50, 'P b a n :2', transformations) space_groups[50] = sg space_groups['P b a n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(51, 'P m m a', transformations) space_groups[51] = sg space_groups['P m m a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(52, 'P n n a', transformations) space_groups[52] = sg space_groups['P n n a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(53, 'P m n a', transformations) space_groups[53] = sg space_groups['P m n a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(54, 'P c c a', transformations) space_groups[54] = sg space_groups['P c c a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(55, 'P b a m', transformations) space_groups[55] = sg space_groups['P b a m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(56, 'P c c n', transformations) space_groups[56] = sg space_groups['P c c n'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(57, 'P b c m', transformations) space_groups[57] = sg space_groups['P b c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(58, 'P n n m', transformations) space_groups[58] = sg space_groups['P n n m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(59, 'P m m n :2', transformations) space_groups[59] = sg space_groups['P m m n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(60, 'P b c n', transformations) space_groups[60] = sg space_groups['P b c n'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(61, 'P b c a', transformations) space_groups[61] = sg space_groups['P b c a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(62, 'P n m a', transformations) space_groups[62] = sg space_groups['P n m a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(63, 'C m c m', transformations) space_groups[63] = sg space_groups['C m c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(64, 'C m c a', transformations) space_groups[64] = sg space_groups['C m c a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(65, 'C m m m', transformations) space_groups[65] = sg space_groups['C m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(66, 'C c c m', transformations) space_groups[66] = sg space_groups['C c c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(67, 'C m m a', transformations) space_groups[67] = sg space_groups['C m m a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(68, 'C c c a :2', transformations) space_groups[68] = sg space_groups['C c c a :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(69, 'F m m m', transformations) space_groups[69] = sg space_groups['F m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,3,3]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,0,3]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(70, 'F d d d :2', transformations) space_groups[70] = sg space_groups['F d d d :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(71, 'I m m m', transformations) space_groups[71] = sg space_groups['I m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(72, 'I b a m', transformations) space_groups[72] = sg space_groups['I b a m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(73, 'I b c a', transformations) space_groups[73] = sg space_groups['I b c a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(74, 'I m m a', transformations) space_groups[74] = sg space_groups['I m m a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(75, 'P 4', transformations) space_groups[75] = sg space_groups['P 4'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(76, 'P 41', transformations) space_groups[76] = sg space_groups['P 41'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(77, 'P 42', transformations) space_groups[77] = sg space_groups['P 42'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(78, 'P 43', transformations) space_groups[78] = sg space_groups['P 43'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(79, 'I 4', transformations) space_groups[79] = sg space_groups['I 4'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(80, 'I 41', transformations) space_groups[80] = sg space_groups['I 41'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(81, 'P -4', transformations) space_groups[81] = sg space_groups['P -4'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(82, 'I -4', transformations) space_groups[82] = sg space_groups['I -4'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(83, 'P 4/m', transformations) space_groups[83] = sg space_groups['P 4/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(84, 'P 42/m', transformations) space_groups[84] = sg space_groups['P 42/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(85, 'P 4/n :2', transformations) space_groups[85] = sg space_groups['P 4/n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(86, 'P 42/n :2', transformations) space_groups[86] = sg space_groups['P 42/n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(87, 'I 4/m', transformations) space_groups[87] = sg space_groups['I 4/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-3,-3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,5,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(88, 'I 41/a :2', transformations) space_groups[88] = sg space_groups['I 41/a :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(89, 'P 4 2 2', transformations) space_groups[89] = sg space_groups['P 4 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(90, 'P 4 21 2', transformations) space_groups[90] = sg space_groups['P 4 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(91, 'P 41 2 2', transformations) space_groups[91] = sg space_groups['P 41 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(92, 'P 41 21 2', transformations) space_groups[92] = sg space_groups['P 41 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(93, 'P 42 2 2', transformations) space_groups[93] = sg space_groups['P 42 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(94, 'P 42 21 2', transformations) space_groups[94] = sg space_groups['P 42 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(95, 'P 43 2 2', transformations) space_groups[95] = sg space_groups['P 43 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(96, 'P 43 21 2', transformations) space_groups[96] = sg space_groups['P 43 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(97, 'I 4 2 2', transformations) space_groups[97] = sg space_groups['I 4 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(98, 'I 41 2 2', transformations) space_groups[98] = sg space_groups['I 41 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(99, 'P 4 m m', transformations) space_groups[99] = sg space_groups['P 4 m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(100, 'P 4 b m', transformations) space_groups[100] = sg space_groups['P 4 b m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(101, 'P 42 c m', transformations) space_groups[101] = sg space_groups['P 42 c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(102, 'P 42 n m', transformations) space_groups[102] = sg space_groups['P 42 n m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(103, 'P 4 c c', transformations) space_groups[103] = sg space_groups['P 4 c c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(104, 'P 4 n c', transformations) space_groups[104] = sg space_groups['P 4 n c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(105, 'P 42 m c', transformations) space_groups[105] = sg space_groups['P 42 m c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(106, 'P 42 b c', transformations) space_groups[106] = sg space_groups['P 42 b c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(107, 'I 4 m m', transformations) space_groups[107] = sg space_groups['I 4 m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(108, 'I 4 c m', transformations) space_groups[108] = sg space_groups['I 4 c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(109, 'I 41 m d', transformations) space_groups[109] = sg space_groups['I 41 m d'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(110, 'I 41 c d', transformations) space_groups[110] = sg space_groups['I 41 c d'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(111, 'P -4 2 m', transformations) space_groups[111] = sg space_groups['P -4 2 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(112, 'P -4 2 c', transformations) space_groups[112] = sg space_groups['P -4 2 c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(113, 'P -4 21 m', transformations) space_groups[113] = sg space_groups['P -4 21 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(114, 'P -4 21 c', transformations) space_groups[114] = sg space_groups['P -4 21 c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(115, 'P -4 m 2', transformations) space_groups[115] = sg space_groups['P -4 m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(116, 'P -4 c 2', transformations) space_groups[116] = sg space_groups['P -4 c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(117, 'P -4 b 2', transformations) space_groups[117] = sg space_groups['P -4 b 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(118, 'P -4 n 2', transformations) space_groups[118] = sg space_groups['P -4 n 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(119, 'I -4 m 2', transformations) space_groups[119] = sg space_groups['I -4 m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(120, 'I -4 c 2', transformations) space_groups[120] = sg space_groups['I -4 c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(121, 'I -4 2 m', transformations) space_groups[121] = sg space_groups['I -4 2 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(122, 'I -4 2 d', transformations) space_groups[122] = sg space_groups['I -4 2 d'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(123, 'P 4/m m m', transformations) space_groups[123] = sg space_groups['P 4/m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(124, 'P 4/m c c', transformations) space_groups[124] = sg space_groups['P 4/m c c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(125, 'P 4/n b m :2', transformations) space_groups[125] = sg space_groups['P 4/n b m :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(126, 'P 4/n n c :2', transformations) space_groups[126] = sg space_groups['P 4/n n c :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(127, 'P 4/m b m', transformations) space_groups[127] = sg space_groups['P 4/m b m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(128, 'P 4/m n c', transformations) space_groups[128] = sg space_groups['P 4/m n c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(129, 'P 4/n m m :2', transformations) space_groups[129] = sg space_groups['P 4/n m m :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(130, 'P 4/n c c :2', transformations) space_groups[130] = sg space_groups['P 4/n c c :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(131, 'P 42/m m c', transformations) space_groups[131] = sg space_groups['P 42/m m c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(132, 'P 42/m c m', transformations) space_groups[132] = sg space_groups['P 42/m c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(133, 'P 42/n b c :2', transformations) space_groups[133] = sg space_groups['P 42/n b c :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(134, 'P 42/n n m :2', transformations) space_groups[134] = sg space_groups['P 42/n n m :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(135, 'P 42/m b c', transformations) space_groups[135] = sg space_groups['P 42/m b c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(136, 'P 42/m n m', transformations) space_groups[136] = sg space_groups['P 42/m n m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(137, 'P 42/n m c :2', transformations) space_groups[137] = sg space_groups['P 42/n m c :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(138, 'P 42/n c m :2', transformations) space_groups[138] = sg space_groups['P 42/n c m :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(139, 'I 4/m m m', transformations) space_groups[139] = sg space_groups['I 4/m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(140, 'I 4/m c m', transformations) space_groups[140] = sg space_groups['I 4/m c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-3,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-3,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(141, 'I 41/a m d :2', transformations) space_groups[141] = sg space_groups['I 41/a m d :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-3,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-3,-3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,5,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,-1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(142, 'I 41/a c d :2', transformations) space_groups[142] = sg space_groups['I 41/a c d :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(143, 'P 3', transformations) space_groups[143] = sg space_groups['P 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(144, 'P 31', transformations) space_groups[144] = sg space_groups['P 31'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(145, 'P 32', transformations) space_groups[145] = sg space_groups['P 32'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(146, 'R 3 :H', transformations) space_groups[146] = sg space_groups['R 3 :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(147, 'P -3', transformations) space_groups[147] = sg space_groups['P -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(148, 'R -3 :H', transformations) space_groups[148] = sg space_groups['R -3 :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(149, 'P 3 1 2', transformations) space_groups[149] = sg space_groups['P 3 1 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(150, 'P 3 2 1', transformations) space_groups[150] = sg space_groups['P 3 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(151, 'P 31 1 2', transformations) space_groups[151] = sg space_groups['P 31 1 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(152, 'P 31 2 1', transformations) space_groups[152] = sg space_groups['P 31 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(153, 'P 32 1 2', transformations) space_groups[153] = sg space_groups['P 32 1 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(154, 'P 32 2 1', transformations) space_groups[154] = sg space_groups['P 32 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(155, 'R 3 2 :H', transformations) space_groups[155] = sg space_groups['R 3 2 :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(156, 'P 3 m 1', transformations) space_groups[156] = sg space_groups['P 3 m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(157, 'P 3 1 m', transformations) space_groups[157] = sg space_groups['P 3 1 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(158, 'P 3 c 1', transformations) space_groups[158] = sg space_groups['P 3 c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(159, 'P 3 1 c', transformations) space_groups[159] = sg space_groups['P 3 1 c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(160, 'R 3 m :H', transformations) space_groups[160] = sg space_groups['R 3 m :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(161, 'R 3 c :H', transformations) space_groups[161] = sg space_groups['R 3 c :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(162, 'P -3 1 m', transformations) space_groups[162] = sg space_groups['P -3 1 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(163, 'P -3 1 c', transformations) space_groups[163] = sg space_groups['P -3 1 c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(164, 'P -3 m 1', transformations) space_groups[164] = sg space_groups['P -3 m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(165, 'P -3 c 1', transformations) space_groups[165] = sg space_groups['P -3 c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(166, 'R -3 m :H', transformations) space_groups[166] = sg space_groups['R -3 m :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,-1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,-1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,-1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(167, 'R -3 c :H', transformations) space_groups[167] = sg space_groups['R -3 c :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(168, 'P 6', transformations) space_groups[168] = sg space_groups['P 6'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(169, 'P 61', transformations) space_groups[169] = sg space_groups['P 61'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(170, 'P 65', transformations) space_groups[170] = sg space_groups['P 65'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(171, 'P 62', transformations) space_groups[171] = sg space_groups['P 62'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(172, 'P 64', transformations) space_groups[172] = sg space_groups['P 64'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(173, 'P 63', transformations) space_groups[173] = sg space_groups['P 63'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(174, 'P -6', transformations) space_groups[174] = sg space_groups['P -6'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(175, 'P 6/m', transformations) space_groups[175] = sg space_groups['P 6/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(176, 'P 63/m', transformations) space_groups[176] = sg space_groups['P 63/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(177, 'P 6 2 2', transformations) space_groups[177] = sg space_groups['P 6 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(178, 'P 61 2 2', transformations) space_groups[178] = sg space_groups['P 61 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(179, 'P 65 2 2', transformations) space_groups[179] = sg space_groups['P 65 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(180, 'P 62 2 2', transformations) space_groups[180] = sg space_groups['P 62 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(181, 'P 64 2 2', transformations) space_groups[181] = sg space_groups['P 64 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(182, 'P 63 2 2', transformations) space_groups[182] = sg space_groups['P 63 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(183, 'P 6 m m', transformations) space_groups[183] = sg space_groups['P 6 m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(184, 'P 6 c c', transformations) space_groups[184] = sg space_groups['P 6 c c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(185, 'P 63 c m', transformations) space_groups[185] = sg space_groups['P 63 c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(186, 'P 63 m c', transformations) space_groups[186] = sg space_groups['P 63 m c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(187, 'P -6 m 2', transformations) space_groups[187] = sg space_groups['P -6 m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(188, 'P -6 c 2', transformations) space_groups[188] = sg space_groups['P -6 c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(189, 'P -6 2 m', transformations) space_groups[189] = sg space_groups['P -6 2 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(190, 'P -6 2 c', transformations) space_groups[190] = sg space_groups['P -6 2 c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(191, 'P 6/m m m', transformations) space_groups[191] = sg space_groups['P 6/m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(192, 'P 6/m c c', transformations) space_groups[192] = sg space_groups['P 6/m c c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(193, 'P 63/m c m', transformations) space_groups[193] = sg space_groups['P 63/m c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(194, 'P 63/m m c', transformations) space_groups[194] = sg space_groups['P 63/m m c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(195, 'P 2 3', transformations) space_groups[195] = sg space_groups['P 2 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(196, 'F 2 3', transformations) space_groups[196] = sg space_groups['F 2 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(197, 'I 2 3', transformations) space_groups[197] = sg space_groups['I 2 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(198, 'P 21 3', transformations) space_groups[198] = sg space_groups['P 21 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(199, 'I 21 3', transformations) space_groups[199] = sg space_groups['I 21 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(200, 'P m -3', transformations) space_groups[200] = sg space_groups['P m -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(201, 'P n -3 :2', transformations) space_groups[201] = sg space_groups['P n -3 :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(202, 'F m -3', transformations) space_groups[202] = sg space_groups['F m -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,3,3]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,3,3]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,3,3]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,0,3]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,0,3]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,0,3]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(203, 'F d -3 :2', transformations) space_groups[203] = sg space_groups['F d -3 :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(204, 'I m -3', transformations) space_groups[204] = sg space_groups['I m -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(205, 'P a -3', transformations) space_groups[205] = sg space_groups['P a -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(206, 'I a -3', transformations) space_groups[206] = sg space_groups['I a -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(207, 'P 4 3 2', transformations) space_groups[207] = sg space_groups['P 4 3 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(208, 'P 42 3 2', transformations) space_groups[208] = sg space_groups['P 42 3 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(209, 'F 4 3 2', transformations) space_groups[209] = sg space_groups['F 4 3 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(210, 'F 41 3 2', transformations) space_groups[210] = sg space_groups['F 41 3 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(211, 'I 4 3 2', transformations) space_groups[211] = sg space_groups['I 4 3 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(212, 'P 43 3 2', transformations) space_groups[212] = sg space_groups['P 43 3 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(213, 'P 41 3 2', transformations) space_groups[213] = sg space_groups['P 41 3 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,5,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,5,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,5,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(214, 'I 41 3 2', transformations) space_groups[214] = sg space_groups['I 41 3 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(215, 'P -4 3 m', transformations) space_groups[215] = sg space_groups['P -4 3 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(216, 'F -4 3 m', transformations) space_groups[216] = sg space_groups['F -4 3 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(217, 'I -4 3 m', transformations) space_groups[217] = sg space_groups['I -4 3 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(218, 'P -4 3 n', transformations) space_groups[218] = sg space_groups['P -4 3 n'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num =
N.array([0,0,0])
numpy.array
import re import numpy as np def part1(): move_forward = lambda num, ship: (ship + [ [num * np.cos(np.radians(ship[2,0]))], [num * np.sin(np.radians(ship[2,0]))], [0] ],) instruction_map = { 'N': lambda num, ship: (ship + [[0], [num],[0]],), 'S': lambda num, ship: (ship + [[0],[-num],[0]],), 'E': lambda num, ship: (ship + [[num], [0],[0]],), 'W': lambda num, ship: (ship + [[-num],[0],[0]],), 'L': lambda num, ship: (ship + [[0],[0],[num]],), 'R': lambda num, ship: (ship + [[0],[0],[-num]],), 'F': move_forward } ship = np.zeros((3,1)) ship, = navigate_ship(instruction_map, [ship]) return
np.abs(ship[:2])
numpy.abs
#!/usr/bin/env python # coding: utf-8 # In[1]: get_ipython().run_line_magic("matplotlib", "inline") import cv2, matplotlib import numpy as np from skimage.morphology import ( skeletonize, skeletonize_3d, medial_axis, thin, local_minima, local_maxima, ) from scipy.ndimage import distance_transform_edt from math import sqrt import matplotlib.pyplot as plt from os.path import expanduser, splitext from os import scandir, makedirs # import random import csv from tqdm import tnrange, tqdm_notebook from pathlib import Path debug = True # plot every steps # In[2]: def read_from_csv(filepath): if Path(filepath).is_file(): with open(filepath, "r", newline="", encoding="utf-8-sig") as csvfile: listreader = csv.reader(csvfile) columns = next(listreader) readlist = list(listreader) else: columns = [] readlist = [] return columns, readlist def read_bgr_from_image_unicode(path): """workaround for non-ascii filenames""" stream = open(path, "rb") bytes_ = bytearray(stream.read()) numpyarray = np.asarray(bytes_, dtype=np.uint8) bgr = cv2.imdecode(numpyarray, cv2.IMREAD_UNCHANGED) return bgr def save_bgr_to_image_unicode(bgr, path, ext_to=".png"): """workaround for non-ascii filenames""" _, numpyarray = cv2.imencode(ext_to, bgr) with open(path, "wb") as file: file.write(numpyarray) # # unit mask # In[3]: def color_dict_mask( img_dict={ "Lab": np.zeros((1, 1, 3), dtype="uint8"), "HSV": np.zeros((1, 1, 3), dtype="uint8"), }, colors={ "colorname": { "Lab": ([0, 0, 0], [255, 255, 255]), "HSV": ([0, 0, 0], [255, 255, 255]), } }, ): # get masks matching any of the colors matching all descriptions mask = np.zeros_like(list(img_dict.values())[0][:, :, 0]) for color_dict in colors.values(): mask_color = np.ones_like(mask) * 255 for colorspace, limits in color_dict.items(): mask_colorspace = cv2.inRange( img_dict[colorspace], np.array(limits[0]), np.array(limits[1]) ) mask_color = cv2.bitwise_and(mask_color, mask_colorspace) mask = cv2.bitwise_or(mask, mask_color) return mask def get_color_mask( blur={ "Lab": np.zeros((1, 1, 3), dtype="uint8"), "HSV": np.zeros((1, 1, 3), dtype="uint8"), }, colors={ "colorname": { "Lab": ([0, 0, 0], [255, 255, 255]), "HSV": ([0, 0, 0], [255, 255, 255]), } }, ): # lab = cv2.cvtColor(bgr, cv2.COLOR_BGR2Lab) # blur = {} # blur["Lab"] = cv2.bilateralFilter(lab, 15, 25, 150) # blur["BGR"] = cv2.cvtColor(blur["Lab"], cv2.COLOR_Lab2BGR) # blur["HSV"] = cv2.cvtColor(blur["BGR"], cv2.COLOR_BGR2HSV) # get masks matching any of the colors matching all descriptions mask = color_dict_mask(blur, colors) # fill holes and remove noise contours, hierarchy = cv2.findContours(mask, cv2.RETR_TREE, cv2.CHAIN_APPROX_NONE) holes = [contours[i] for i in range(len(contours)) if hierarchy[0][i][3] >= 0] cv2.drawContours(mask, holes, -1, 255, -1) kernel_5c = np.array( [ [0, 1, 1, 1, 0], [1, 1, 1, 1, 1], [1, 1, 1, 1, 1], [1, 1, 1, 1, 1], [0, 1, 1, 1, 0], ], dtype=np.uint8, ) kernel_9c = np.zeros((9, 9), np.uint8) cv2.circle(kernel_9c, (4, 4), 4, 1, -1) kernel_15c = np.zeros((15, 15), np.uint8) cv2.circle(kernel_15c, (7, 7), 7, 1, -1) # mask = cv2.erode(mask, kernel_5c, iterations=1) smallbits = [ contours[i] for i in range(len(contours)) if hierarchy[0][i][3] == -1 and cv2.contourArea(contours[i]) <= 100 ] cv2.drawContours(mask, smallbits, -1, 0, -1) # removing imperfections contours, _ = cv2.findContours(mask, cv2.RETR_EXTERNAL, cv2.CHAIN_APPROX_NONE) for c in contours: if cv2.contourArea(c) >= 100: mask_single_c = np.zeros_like(mask) cv2.drawContours(mask_single_c, c, -1, 255, -1) mask_single_c = cv2.morphologyEx( mask_single_c, cv2.MORPH_CLOSE, kernel_9c, iterations=1 ) mask |= mask_single_c return mask def get_marked_contours(contours, marker_mask, min_marked_area): marked_contours = [] for c in contours: mask_single_c = np.zeros_like(marker_mask) cv2.drawContours(mask_single_c, [c], -1, 255, -1) c_area = cv2.countNonZero(mask_single_c) marked_area = cv2.countNonZero(mask_single_c & marker_mask) if marked_area >= min_marked_area: marked_contours.append(c) return marked_contours def get_marked_mask(boundary_mask, marker_mask, min_marked_area): contours, hierarchy = cv2.findContours( boundary_mask, cv2.RETR_TREE, cv2.CHAIN_APPROX_NONE ) marked_contours = get_marked_contours(contours, marker_mask, min_marked_area) marked_mask = np.zeros_like(boundary_mask) if marked_contours: cv2.drawContours(marked_mask, marked_contours, -1, 255, -1) return marked_mask def get_wall_mask(bgr=np.zeros((1, 1, 3), dtype="uint8")): kernel_3 = np.ones((3, 3), np.uint8) kernel_5c = np.array( [ [0, 1, 1, 1, 0], [1, 1, 1, 1, 1], [1, 1, 1, 1, 1], [1, 1, 1, 1, 1], [0, 1, 1, 1, 0], ], dtype=np.uint8, ) # get mask based on color and shape redimg = bgr[:, :, 2] _, threshold_img_inv = cv2.threshold(redimg, 140, 255, cv2.THRESH_BINARY_INV) # plt.imshow(threshold_img_inv) threshold_blur = cv2.medianBlur(threshold_img_inv, 5) # plt.imshow(threshold_blur) erosion = cv2.erode(threshold_blur, kernel_3) opening = cv2.morphologyEx(threshold_blur, cv2.MORPH_OPEN, kernel_3) # dilation = cv2.dilate(opening, kernel_3) # plt.imshow(opening) mask = cv2.bitwise_and(threshold_img_inv, opening) # plt.figure() # plt.imshow(mask) kernel = kernel_5c ret, markers = cv2.connectedComponents(mask) # plt.figure() # plt.imshow(markers) wall_mask =
np.zeros_like(mask)
numpy.zeros_like
import pickle import numpy as np import pytest import torch from torch import nn from garage.envs import GymEnv from garage.torch.policies import DeterministicMLPPolicy # yapf: Disable from tests.fixtures.envs.dummy import DummyBoxEnv, DummyDictEnv # yapf: Enable class TestDeterministicMLPPolicies: # yapf: disable @pytest.mark.parametrize('hidden_sizes', [ (1, ), (2, ), (3, ), (1, 1), (2, 2)]) # yapf: enable def test_get_action(self, hidden_sizes): env_spec = GymEnv(DummyBoxEnv()) obs_dim = env_spec.observation_space.flat_dim act_dim = env_spec.action_space.flat_dim obs = torch.ones([1, obs_dim], dtype=torch.float32) obs_np = np.ones([1, obs_dim], dtype=np.float32) policy = DeterministicMLPPolicy(env_spec=env_spec, hidden_nonlinearity=None, hidden_sizes=hidden_sizes, hidden_w_init=nn.init.ones_, output_w_init=nn.init.ones_) expected_output = np.full([1, act_dim], fill_value=obs_dim *
np.prod(hidden_sizes)
numpy.prod
import numpy as np from datetime import datetime cnn_layer_types = ["CONV", "MAXPOOL"] # ( layer type , x_length , y_length , zero_padding, no of mask ) zero_padding and no of mask not applicable for MAXPOOL cnn_layer_info = [] ndelst = inpt_dim = [] # contains the node numbers in FC layer mask_depth = [] # contains the mask depths of each layer epoch_itr = optLyr = hydLyr = 0 lrn_rate = nrm_fac = 0.0 read_wt = 0 instructions_file = "instructions.txt" data_input_file = "data_input_train.txt" data_output_file = "data_output_train.txt" weight_file = "" f_ins = open(instructions_file, "r") lns = f_ins.readlines() # reading the instructions from the instruction files try: lrn_rate = float(lns[0].strip(' \n')) # first line should be learning rate epoch_itr = int(lns[1].strip(' \n')) # second line should contain no of iterations inpt_dim = lns[2].strip(' \n').split(' ') # third line should contain the input matrix dimensions inpt_dim = [int(inpt_dim[i]) for i in range(len(inpt_dim))] if (len(inpt_dim) == 3): mask_depth.append(inpt_dim[2]) else: mask_depth.append(1) optLyr = int(lns[3].strip(' \n')) # fourth line should contain no of nodes in output layer nrm_fac = float(lns[4].strip(' \n')) # fifth line should contain normalization factor hydLyr = int(lns[5].strip(' \n')) # sixth line should contain no of hidden layer ndelst.extend( [int(x) for x in lns[6].strip(' \n').split(' ')]) # seventh line should contain no of nodes in hidden layer ndelst.append(optLyr) read_wt_ln = lns[7].strip(' \n') if (int(read_wt_ln[0]) == 1): weight_file = (read_wt_ln.split(' '))[1] read_wt = 1 for i in range(8, len(lns)): # From eighth line the convolutions and pooling instructions are given intgs = lns[i].strip(' \n').split(' ') operate = cnn_layer_types.index(intgs[0]) if (operate == 0): # check for convolution or pooling cnn_layer_info.append((operate, int(intgs[1]), int(intgs[2]), int(intgs[3]), int(intgs[4]))) mask_depth.append(int(intgs[4])) else: cnn_layer_info.append((operate, int(intgs[1]), int(intgs[2]))) mask_depth.append(mask_depth[-1]) except: print("Wrong Instruction list .. Exitting code") exit(1) f_ins.close() # checking whether convolution operations are correct or not def check_input(): row, col = inpt_dim[0], inpt_dim[1] for i in range(len(cnn_layer_info)): pad = 0 # the pad applied if (cnn_layer_info[i][0] == 0): pad = cnn_layer_info[i][3] row = row - cnn_layer_info[i][1] + 2 * pad + 1 col = col - cnn_layer_info[i][2] + 2 * pad + 1 return row, col row, col = check_input() if (row <= 0 or col <= 0): # row and column should be positive to be valid print("Invalid Convolution and pooling layers .. Exitting code") exit(1) inpLyr = row * col * mask_depth[-1] # no of input nodes for the fully connected layer ndelst.insert(0, inpLyr) # printing the layer informations print(" Learn Rate = " + str(lrn_rate)) print(" No of epoch iterations = " + str(epoch_itr)) print(" No of input layer node = " + str(inpLyr)) print(" No of output layer node = " + str(optLyr)) print(" No of normalization = " + str(nrm_fac)) for i in range(len(cnn_layer_info)): pad = 0 no_mask = None if (cnn_layer_info[i][0] == 0): pad = cnn_layer_info[i][3] no_mask = cnn_layer_info[i][4] print(" " + cnn_layer_types[cnn_layer_info[i][0]] + " " + str(cnn_layer_info[i][1]) + "X" + str( cnn_layer_info[i][2]) + " pad " + str(pad) + " no of masks " + str(no_mask)) print(" No of Hidden layers = " + str(hydLyr)) print(" No of nodes in the hidden layers = ", end="") for i in range(1, len(ndelst) - 1): print(str(ndelst[i]), end=" ") print("") train_input = [] train_input_data = [] train_output = [] no_of_input_data = 0 # accepting input in the specified format and also the output f_in = open(data_input_file, "r") f_out = open(data_output_file, "r") for lns in f_in: intgs = [(float(x)) for x in lns.strip(' \n').split()] if (len(intgs) == 0): train_input.append(np.array(train_input_data)) train_input_data = [] no_of_input_data += 1 continue train_input_data.append(np.multiply(1.0 / nrm_fac, intgs)) f_in.close() for lns in f_out: intgs = [float(x) for x in lns.split()] train_output.append(intgs) f_out.close() def make_conv_mask(dep, row, col): # creating the mask for the convolution return np.random.rand(dep, row, col) - .5 * np.ones(shape=(dep, row, col), dtype=float) def make_max_pool(dep, row, col): # creating a dummy mask of same shape -- no use return np.zeros(shape=(dep, row, col), dtype=float) # for max pool, the positions of the maximum wrt to the weight mask is stored def create_masks(): # returning the masks for the convolution cnn_masks = [] # contains all the corelation masks for each layer func_dict = {0: make_conv_mask, 1: make_max_pool} # the functions acc to masks for i in range(len(cnn_layer_info)): lyr_cnn_msk = [] # contains the mask for each layers if (cnn_layer_info[i][0] != 1): # create masks for CONV Pool for k in range(mask_depth[i + 1]): # creating specified no of masks in each layer lyr_cnn_msk.append( func_dict[cnn_layer_info[i][0]](mask_depth[i], cnn_layer_info[i][1], cnn_layer_info[i][2])) else: lyr_cnn_msk.append( func_dict[cnn_layer_info[i][0]](mask_depth[i], cnn_layer_info[i][1], cnn_layer_info[i][2])) cnn_masks.append(lyr_cnn_msk) return cnn_masks #read weights and masks from a file def read_masks_wts(): f_wt = open(weight_file, "r") lns = f_wt.readlines() c = 0 wtmtx = [] # the array of the corresponding weight matrices masks_list = [] # the convolution masks for i in range(len(cnn_layer_info)): if( cnn_layer_info[i][0] == 0 ): masks_list_lyr = [] for j in range(cnn_layer_info[i][-1]): masks = np.zeros(shape=(mask_depth[i],cnn_layer_info[i][1],cnn_layer_info[i][2]), dtype=float) for row in range(len(masks[0])): row_ln = [x for x in lns[c].strip(' \n').split('\t')] c+=1 for dep in range(len(masks)): mtx_row = [(float(x)) for x in row_ln[dep].strip(' \n').split(' ')] for col in range(len(masks[0][0])): masks[dep][row][col] = mtx_row[col] masks_list_lyr.append(masks) c+=1 c+=1 else: masks_list_lyr = [] masks = np.zeros(shape=(mask_depth[i], cnn_layer_info[i][1], cnn_layer_info[i][2]), dtype=float) c = c + 3 + len(masks) masks_list_lyr.append(masks) masks_list.append(masks_list_lyr) c+=1 for i in range(hydLyr + 1): wt = [] # the weights for j in range(0, ndelst[i + 1]): intgs = [(float(x)) for x in lns[c].split()] wt.append(np.array(intgs)) c += 1 wtmtx.append(np.array(wt)) c += 2 f_wt.close() return wtmtx, masks_list # creates the initial weights for the FC layer def create_initial_wts(): wtmtx = [] # initial weight matrix list for i in range(1, len(ndelst), 1): # creating zero-centered weights wtmtx.append( np.random.rand(ndelst[i], ndelst[i - 1]) - .5 * np.ones(shape=(ndelst[i], ndelst[i - 1]), dtype=float)) return wtmtx # used for adding zero pad as necessary def add_padding(inpt, p): opt_arr = np.zeros((len(inpt), len(inpt[0]) + 2 * p, len(inpt[0][0]) + 2 * p), dtype=float) opt_arr[:, p:len(inpt[0]) + p, p:len(inpt[0][0]) + p] = inpt return opt_arr # used for removing the pad def remove_pad(inpt, p): return inpt[:, p:len(inpt[0]) - p, p:len(inpt[0][0]) - p] def sigmoid(z): # sigmoid function return 1 / (1 + np.exp(-z)) def sigmoidPrime(z): # gradient of sigmoid function return np.exp(-z) / ((1 + np.exp(-z)) ** 2) # used for applying convolution for CONV layers def convolute(mask, inpt, opt_dep): row = len(inpt[0]) - len(mask[0][0]) + 1 col = len(inpt[0][0]) - len(mask[0][0][0]) + 1 result = np.zeros(shape=(opt_dep, row, col), dtype=float) for k in range(opt_dep): for i in range(row): for j in range(col): result[k][i][j] = np.sum( np.multiply(mask[k], inpt[:, i:(i + len(mask[0][0])), j:j + len(mask[0][0][0])])) return result # used for applying MAX Pool layers def convolute_max_pool(mask, inpt, dep): row = len(inpt[0]) - len(mask[0]) + 1 col = len(inpt[0][0]) - len(mask[0][0]) + 1 # print("row "+str(row)) # print("col " + str(col)) max_pos = np.zeros(shape=(dep, row, col), dtype=float) result = np.zeros(shape=(dep, row, col), dtype=float) for k in range(dep): for i in range(row): for j in range(col): a = inpt[k, i:i + len(mask[0]), j:j + len(mask[0][0])] pos = np.unravel_index(np.argmax(a, axis=None), a.shape) max_pos[k][i][j] = 2 * pos[0] + pos[1] # stores the 2D position where maximum occurs result[k][i][j] = np.amax(a) return max_pos, result # performs the forward pass of the CONV and MAXPOOL layers def forword_cnn(inpt, cnn_masks): inpt_list = [] for i in range(len(cnn_layer_info)): if (cnn_layer_info[i][0] == 1): # special treatment for MAXPOOL layers # print(str(len(inpt[0])) + " in forward_cnn1") inpt_list.append(inpt) cnn_masks[i][0] = make_max_pool(mask_depth[i], cnn_layer_info[i][1], cnn_layer_info[i][2]) cnn_masks[i][0], inpt = convolute_max_pool(cnn_masks[i][0], inpt, mask_depth[i]) # print(str(len(inpt[0])) + " in forward_cnn2") else: if (cnn_layer_info[i][0] == 0): # adding padding for CONV layers inpt = add_padding(inpt, cnn_layer_info[i][-2]) inpt_list.append(inpt) inpt = convolute(cnn_masks[i], inpt, mask_depth[i + 1]) inpt_list.append(inpt) return inpt_list, cnn_masks # performs the forward pass of the FC layer def forward_pass(wtmtx, lyrs): lyrs_list = [] # the layers contained in a list lyrs_list_no_sgm = [] # the layers before the sigmoid is applied lyrs_list.append(lyrs) lyrs_list_no_sgm.append(lyrs) for i in range(0, len(ndelst) - 1): lyrs_list_no_sgm.append(np.matmul(wtmtx[i], lyrs)) lyrs = sigmoid(lyrs_list_no_sgm[-1]) lyrs_list.append(lyrs) return lyrs_list, lyrs_list_no_sgm # calculating mask gradient for CONV def calc_mask_grad(mask, opt_lyr_grad, inpt_lyr): mask_grad = np.zeros(shape=(len(mask), len(mask[0]), len(mask[0][0])), dtype=float) for k in range(len(inpt_lyr)): # calculating mask gradient layer-wise grad_2d = np.zeros(shape=(len(mask[0]), len(mask[0][0])), dtype=float) for i in range(len(mask[0])): for j in range(len(mask[0][0])): grad_2d[i][j] = np.sum( np.multiply(opt_lyr_grad, inpt_lyr[k, i:i + len(opt_lyr_grad), j:j + len(opt_lyr_grad[0])])) mask_grad[k, :, :] = grad_2d return mask_grad # calculating layer gradients at each position for CONV def jugar_grad(mask, opt_grad, i1, j1): res = 0.0 for i in range(i1, i1 - len(mask), -1): for j in range(j1, j1 - len(mask[0]), -1): try: # for exitting index greater than highest length if (i < 0 or j < 0): # for exitting negative indices continue res += opt_grad[i][j] * mask[i1 - i][j1 - j] except: pass return res # calculating layer gradients for CONV def cnn_lyr_grad(mask_list, opt_lyr_grad, inpt_lyr): inpt_lyr_grad = np.zeros(shape=(len(inpt_lyr), len(inpt_lyr[0]), len(inpt_lyr[0][0])), dtype=float) for k in range(len(mask_list)): mask = mask_list[k] opt_grad = opt_lyr_grad[k] for k1 in range(len(inpt_lyr)): for i1 in range(len(inpt_lyr[0])): for j1 in range(len(inpt_lyr[0][0])): inpt_lyr_grad[k1][i1][j1] += jugar_grad(mask[k1], opt_grad, i1, j1) return inpt_lyr_grad # calculating layer gradients for MAX_POOL def jugar_grad_max_pool(pos_mask, opt_grad, i1, j1, row_mask, col_mask): res = 0.0 for i in range(i1, i1 - row_mask, -1): for j in range(j1, j1 - col_mask, -1): try: # for exitting index greater than highest length if (i < 0 or j < 0): # for exitting negative indices continue mask = np.zeros(shape=(row_mask, col_mask), dtype=float) rw = int(pos_mask[i1 - i][j1 - j] / col_mask) cl = int(pos_mask[i1 - i][j1 - j]) - int(pos_mask[i1 - i][j1 - j] / col_mask) mask[rw][cl] = 1.0 res += opt_grad[i][j] * mask[i1 - i][j1 - j] except: pass return res # calculating layer gradients for MAX_POOL def cnn_lyr_grad_max_pool(pos_mask_list, opt_lyr_grad, inpt_lyr): inpt_lyr_grad = np.zeros(shape=(len(inpt_lyr), len(inpt_lyr[0]), len(inpt_lyr[0][0])), dtype=float) row_mask = len(inpt_lyr[0]) - len(opt_lyr_grad[0]) + 1 col_mask = len(inpt_lyr[0][0]) - len(opt_lyr_grad[0][0]) + 1 for k1 in range(len(inpt_lyr)): pos_mask = pos_mask_list[k1] opt_grad = opt_lyr_grad[k1] for i1 in range(len(inpt_lyr[0])): for j1 in range(len(inpt_lyr[0][0])): inpt_lyr_grad[k1][i1][j1] = jugar_grad_max_pool(pos_mask, opt_grad, i1, j1, row_mask, col_mask) return inpt_lyr_grad # calculates the backward pass of the CONV and MAXPOOL layers def backward_cnn(inpt_list, cnn_masks, last_lyr_grad): mask_grad_list = [] layer_grad_list = [] layer_grad_list.append(last_lyr_grad) for i in range(1, len(cnn_masks) + 1): if (cnn_layer_info[-1 * i][0] == 0): mask_grad_lyr = [] for j in range(len(cnn_masks[-1 * i])): mask_grad_lyr.append( calc_mask_grad(cnn_masks[-1 * i][j], layer_grad_list[-1][j], inpt_list[-1 * i - 1])) mask_grad_list.append(mask_grad_lyr) lyr_grad = cnn_lyr_grad(cnn_masks[-1 * i], layer_grad_list[-1], inpt_list[-1 * i - 1]) layer_grad_list.append(remove_pad(lyr_grad, cnn_layer_info[-1 * i][-2])) inpt_list[-1 * i - 1] = remove_pad(inpt_list[-1 * i - 1], cnn_layer_info[-1 * i][-2]) elif (cnn_layer_info[-1 * i][0] == 1): layer_grad_list.append( cnn_lyr_grad_max_pool(cnn_masks[-1 * i][0], layer_grad_list[-1], inpt_list[-1 * i - 1])) mask_grad_list.append(cnn_masks[-1 * i]) # adding dummy gradients to maintain indices mask_grad_list = mask_grad_list[::-1] layer_grad_list = layer_grad_list[::-1] return mask_grad_list, layer_grad_list # performs the cost function of the entire network def cost_func(final_lyr, label): for i in range(len(final_lyr)): final_lyr[i] = final_lyr[i] - label[i] # difference between the required labels err = np.linalg.norm(final_lyr) ** 2 # taking the squares return final_lyr, err # performs the backpropagation of the FC layer def backprop(wtmtx, lyrs, lyrs_list_no_sgm): lyr_grad = [] # gradient for the corresponding layers wt_grad = [] # gradient for the weight matrices opt_lyr = np.multiply(2, lyrs[-1]) # gradient from the error function x = sigmoidPrime(np.array(lyrs_list_no_sgm[-1])) # gradient while passing the sigmoid layer opt_lyr =
np.multiply(opt_lyr, x)
numpy.multiply
import scipy import numpy as np import torch """ FUNCTION FOR THE CANONICAL BETA DISTRIBUTION """ def compute_constraint(alpha, beta, x): """ Computes the differential of the likelihood w.r.t. alpha (i.e. a). Used for computed saturated parameters. Input: - alpha: float Parameter a (or $\alpha$) - beta: float Parameter b (or $\beta$) - x: float Data value """ return scipy.special.digamma(alpha) - scipy.special.digamma(alpha + beta) -
np.log(x)
numpy.log
"""program "add_TMT_intensities.py" Adds TMT intensities to PAW protein results files. Written by <NAME>, OHSU, Sept. 2017. The MIT License (MIT) Copyright (c) 2017 <NAME> and OHSU Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. Direct questions to: Technology & Research Collaborations, Oregon Health & Science University, Ph: 503-494-8200, FAX: 503-494-4729, Email: <EMAIL>. """ # To Do Thoughts: """Read each filtered TXT file into pandas table for each column of intensities save as a series or list """ # Requires Python 3.6 or greater and uses numpy. import os import sys import re from pandas import Series, DataFrame import numpy as np import PAW_lib # globals and constants # SPS MS3 zero replacement values MS3_INTENSITY = 500.0 # MS3: individual PSM test of minimum trimmed average reporter ion intensity MS3_MISSING = 150.0 # MS3: replacement for zero total intensities only at the summed protein level # MS2 reporter ion zero replacement values MS2_INTENSITY = 1500.0 # MS2: individual PSM test of minimum trimmed average reporter ion intensity MS2_MISSING = 250.0 # MS2: replacement for zero total intensities only at the summed protein level # version VERSION = 'v1.0.1' # output labels for different TMT sets TMT6 = ['TotInt_126', 'TotInt_127', 'TotInt_128', 'TotInt_129', 'TotInt_130N', 'TotInt_131'] TMT10 = ['TotInt_126C', 'TotInt_127N', 'TotInt_127C', 'TotInt_128N', 'TotInt_128C', 'TotInt_129N', 'TotInt_129C', 'TotInt_130N', 'TotInt_130C', 'TotInt_131N'] TMT11 = ['TotInt_126C', 'TotInt_127N', 'TotInt_127C', 'TotInt_128N', 'TotInt_128C', 'TotInt_129N', 'TotInt_129C', 'TotInt_130N', 'TotInt_130C', 'TotInt_131N', 'TotInt_131C'] TMT16 = ['TotInt_126C', 'TotInt_127N', 'TotInt_127C', 'TotInt_128N', 'TotInt_128C', 'TotInt_129N', 'TotInt_129C', 'TotInt_130N', 'TotInt_130C', 'TotInt_131N', 'TotInt_131C', 'TotInt_132N', 'TotInt_132C', 'TotInt_133N', 'TotInt_133C', 'TotInt_134N'] def base_peptide_sequence(sequence, mask=False): """Returns the peptide amino acid residues from SEQUEST peptide strings """ # remove bounding residues (SEQUEST/Comet format: A.BCD.E) prefix, peptide, suffix = split_peptide(sequence) # remove the 2017 Comet style mod strings peptide = re.sub(r'\[[-+]?[0-9]*(.)?[0-9]*\]', '', peptide) # remove modification symbols: '*', '#', '@', '^', '~', '$', '%', '!', '+', 'n', 'c', '[', ']', "(', ')', '{', '}' peptide = re.sub(r'[*#@^~$%!+nc\[\]\{\}\(\)]', '', peptide) # mask I/L if needed: if mask: return re.sub(r'[IL]', 'j', peptide) else: return peptide def split_peptide(sequence): """Splits peptide assuming that there might be single preceeding and following residues with periods.""" if re.match(r'[-A-Z]\..+\.[-A-Z]', sequence): return sequence[0], sequence[2:-2], sequence[-1] else: if min(sequence.count('['), sequence.count(']')) != sequence.count('.'): print(' WARNING: possible malformed peptide string:', sequence) return '', sequence, '' class PAWTable(object): """General container for PAW tabular results files. Assumes that table may have information before (prefix) and after (suffix) the table. Assumes that there is one header row with some unique start string. The number of table columns is assumed to be the number of tab-delimited elements in the header row. The table can have a ragged last column. Any optional lines after the table rows are assumed to be shorter than the table lines. """ def __init__(self, file_path, header_test_str): self.prefix = [] # any lines in file before header line self.headers = [] # the table header line self.col_map = {} # maps header to column number self.num_cols = 0 # number of elements in header line self.table = [] # the actual table lines (not parsed) self.num_rows = 0 # the number of lines in the table self.suffix = [] # any (optional) lines after the table # read in the file (strip out any Excel CSV stuff) try: contents = open(file_path, 'rt').readlines() for i, line in enumerate(contents): items = [x.strip() if x.strip() else ' ' for x in line.split('\t')] contents[i] = '\t'.join(items) except: print('...Could not read in file:', file_path) raise # find the header line start, end = 0, 0 for i, line in enumerate(contents): if line.startswith(header_test_str): start = i + 1 self.headers = line.split('\t') self.col_map = {v: i for i, v in enumerate(self.headers)} self.num_cols = len(self.col_map) self.prefix = contents[:i] break # assume any rows after main table have fewer columns than header for i, line in enumerate(contents): if i < start: continue if len(line.split('\t')) < (self.num_cols - 1): # allows for a ragged last column end = i break # if table had no extra rows then end=0 if end == 0: self.table = contents[start:] else: self.table = contents[start:end] self.suffix = contents[end:] # add table length self.num_rows = len(self.table) return class PAWPeptideSummary(PAWTable): """Container for PAW peptide summary files. Has methods to make sets of peptides keyed by protein group number and return a set of peptides given a group number. """ def __init__(self, file_path, header_test_str, write): """See PAWTable class for more details on attributes.""" PAWTable.__init__(self, file_path, header_test_str) self.write = write self.peptide_file = file_path self.peptide_sets_dict = {} self.make_peptide_sets_dict() def make_peptide_sets_dict(self): """Makes dictionary of peptide sequence sets keyed by protein group number. Need to have peptide sequence keys match peptide table rows, i.e. separated by charge.""" for line in self.table: items = line.split('\t') key = int(items[self.col_map['ProtGroup']]) value = items[self.col_map['Sequence']].split('.')[1] + '_' + items[self.col_map['Z']] if key in self.peptide_sets_dict: self.peptide_sets_dict[key].add(value) else: self.peptide_sets_dict[key] = set([value]) for obj in self.write: print('length peptide_sets_dict is:', len(self.peptide_sets_dict), file=obj) def get_peptide_set(self, group_number): """Returns peptide set give a protein group number.""" return self.peptide_sets_dict[group_number] class PeptideSummaryRow(object): """Make a container for original line and TMT intensities summed to the peptide level.""" def __init__(self, line, col_map): self.original_line = line self.col_map = col_map self.intensities = None self.new_line = None # make the peptide sequence key items = line.split('\t') self.seq_key = items[col_map['Sequence']].split('.')[1] + '_' + items[col_map['Z']] def load_intensities(self, psm_lists_dict_list, tmt_intensity_dict, number_channels): """Get key information from line and fetch TMT intensities for each PSM. We need col_map to parse line, we need the psm_list_dict to get psm lists for each peptide sequence, we need the TMT intensity dictionary keyed by psm. Computes and adds the summed intensities. """ if len(self.original_line.split('\t')) == (len(self.col_map) - 1): self.original_line += '\t' self.new_line = self.original_line for psm_lists_dict in psm_lists_dict_list: int_list = [] used_psm_count = 0 # loop over all psms in the psm list and collect intensities try: for psm in psm_lists_dict[self.seq_key]: int_list.append(tmt_intensity_dict[psm]) if sum(tmt_intensity_dict[psm]) > 0.0: used_psm_count += 1 except KeyError: pass # make 2D array of reporter ion intensities and sum over psms if len(int_list) > 1: int_array =
np.array(int_list)
numpy.array
import numpy as np import matplotlib matplotlib.use('Agg') import matplotlib.pyplot as plt from sklearn.metrics import mean_squared_error from playground.neural_net.layers.dense import Dense from playground.neural_net.nn_model.forward_propagation import propagate_forward from playground.neural_net.nn_model.backward_propagation import propagate_backward import playground.neural_net.optimizers.adam as adam import playground.neural_net.optimizers.rms_prop as rms_prop from playground.neural_net.utils.mini_batch import * import playground.neural_net.optimizers.gd_with_momentum as gd_with_momentum import playground.neural_net.optimizers.gradient_descent as gradient_descent from playground.neural_net.loss.cost import compute_cost class Model: def __init__(self): self.layers = [] self.activations = {} self.parameters = {} self.optimizer = None self.learning_rate = 0.0 self.X = None self.y = None self.cost = [] self.v = None self.s = None self.mini_batch = None self.train_acc = 0.0 self.test_acc = 0.0 self.mse = 0.0 self.problem_type = None def init_parameters(self): for l in range(1, len(self.layers)): if(self.layers[l].activation == 'relu'): self.parameters['W' + str(l)] = np.random.randn(self.layers[l].units, self.layers[l-1].units) * np.sqrt(2 / self.layers[l - 1].units) else: self.parameters['W' + str(l)] = np.random.randn(self.layers[l].units, self.layers[l-1].units) * np.sqrt(1 / self.layers[l - 1].units) self.parameters['b' + str(l)] = np.zeros((self.layers[l].units, 1)) self.activations['Activation' + str(l)] = self.layers[l].activation def add(self, units, activation): layer = Dense(units, activation) self.layers.append(layer) def compile(self, opt, lr): self.optimizer = opt self.init_parameters() if(opt == 'Adam'): self.v, self.s = adam.initialize_parameters(self.parameters) elif(opt == 'GD_momentum'): self.v = gd_with_momentum.initialize_parameters(self.parameters) elif(opt == 'RMSProp'): self.s = rms_prop.initialize_parameters(self.parameters) self.learning_rate = lr def fit(self, X, Y, epochs, regularization_type, regularization_rate, mini_batch_size): self.X = np.array(X).T self.Y = np.array(Y).T self.mini_batch = create_mini_batches(self.X, self.Y, mini_batch_size) costs = [] t = 0 for i in range(0, epochs): for batch in self.mini_batch: AL, caches = propagate_forward(batch[0], self.parameters, self.activations, self.learning_rate) cost = compute_cost(AL, batch[1], self.parameters,regularization_type, regularization_rate) costs.append(cost) grads = propagate_backward(AL, batch[1], caches, regularization_type, regularization_rate, self.activations, self.learning_rate) if(self.optimizer == 'Adam'): t = t + 1 self.parameters, self.v, self.s = adam.update_parameters(self.parameters, grads, self.v, self.s, t, self.learning_rate) elif(self.optimizer == 'GD' or self.optimizer == 'Sgd'): self.parameters = gradient_descent.update_parameters(self.parameters, grads, self.learning_rate) elif(self.optimizer == 'GD_momentum'): self.parameters, self.v = gd_with_momentum.update_parameters(self.parameters, grads, self.v, 0.9, self.learning_rate) elif(self.optimizer=='RMSProp'): self.parameters, self.s = rms_prop.update_parameters(self.parameters, grads, self.s, self.learning_rate) # if i % 100 == 0: # print ("Cost after iteration %i: %f" %(i, cost)) plt.plot(
np.squeeze(costs)
numpy.squeeze
import torch from enum import Enum from sklearn.metrics import mean_squared_error from torch import nn from torch.nn.modules.loss import _Loss import numpy as np from datasets.radar_dataset import DataContent from run_scripts import print_, device class DeltaSNR(_Loss): def __init__(self, size_average=None, reduce=None, reduction='elementwise_mean'): super(DeltaSNR, self).__init__(size_average, reduce, reduction) self.data_content = DataContent.COMPLEX_PACKET_RD # extend to others?! def forward(self, output_re_im, target_re_im, object_mask, noise_mask): object_mask = object_mask.to(device) noise_mask = noise_mask.to(device) sinr_delta_mean = 0 num_packets = target_re_im.shape[0] if self.data_content is DataContent.COMPLEX_PACKET_RD: for p in range(num_packets): output_re_im_packet = output_re_im[p] target_re_im_packet = target_re_im[p] sinr_output = sinr_from_re_im_format(output_re_im_packet, object_mask, noise_mask) sinr_target = sinr_from_re_im_format(target_re_im_packet, object_mask, noise_mask) sinr_delta_mean += torch.abs(sinr_target - sinr_output) else: print_('WARNING: Not implemented yet.') assert False sinr_delta_mean /= num_packets return sinr_delta_mean class SINRLoss(_Loss): def __init__(self, size_average=None, reduce=None, reduction='elementwise_mean'): super(SINRLoss, self).__init__(size_average, reduce, reduction) self.data_content = DataContent.COMPLEX_PACKET_RD # extend to others?! def forward(self, output_re_im, target_re_im, object_mask, noise_mask): object_mask = object_mask.to(device) noise_mask = noise_mask.to(device) neg_sinr_mean = 0 num_packets = target_re_im.shape[0] if self.data_content is DataContent.COMPLEX_PACKET_RD: for p in range(num_packets): output_re_im_packet = output_re_im[p] neg_sinr_mean -= sinr_from_re_im_format(output_re_im_packet, object_mask, noise_mask) else: print_('WARNING: Not implemented yet.') assert False neg_sinr_mean /= num_packets return neg_sinr_mean class MSEWeightedMagPhase(_Loss): def __init__(self, size_average=None, reduce=None, reduction='elementwise_mean'): super(MSEWeightedMagPhase, self).__init__(size_average, reduce, reduction) self.data_content = DataContent.COMPLEX_PACKET_RD # extend to others?! self.mse = nn.MSELoss() self.w_mag = 0.0 self.w_phase = 0.0 self.w_re_im = 1.0 self.epoch = 0 def forward(self, output_re_im, target_re_im, object_mask, noise_mask): object_mask = object_mask.to(device) loss = 0 num_packets = target_re_im.shape[0] num_re = int(target_re_im.shape[2] / 2) if self.data_content is DataContent.COMPLEX_PACKET_RD: for p in range(num_packets): output_re_im_packet = output_re_im[p] target_re_im_packet = target_re_im[p] output_re_packet = output_re_im_packet[:, :num_re] output_im_packet = output_re_im_packet[:, num_re:] target_re_packet = target_re_im_packet[:, :num_re] target_im_packet = target_re_im_packet[:, num_re:] output_peaks_re = torch.masked_select(output_re_packet, object_mask) output_peaks_im = torch.masked_select(output_im_packet, object_mask) target_peaks_re = torch.masked_select(target_re_packet, object_mask) target_peaks_im = torch.masked_select(target_im_packet, object_mask) phase_target = torch.atan(target_peaks_im / target_peaks_re) phase_output = torch.atan(output_peaks_im / output_peaks_re) target_max_mag = torch.sqrt(target_re_packet ** 2 + target_im_packet ** 2).view(-1).max() target_re_packet_log_mag = target_re_packet / target_max_mag target_im_packet_log_mag = target_im_packet / target_max_mag target_log_mag = 10 * torch.log10(torch.sqrt(target_re_packet_log_mag ** 2 + target_im_packet_log_mag ** 2)) target_log_mag = torch.masked_select(target_log_mag, object_mask) output_max_mag = torch.sqrt(output_re_packet ** 2 + output_im_packet ** 2).view(-1).max() output_re_packet_log_mag = output_re_packet / output_max_mag output_im_packet_log_mag = output_im_packet / output_max_mag output_log_mag = 10 * torch.log10(torch.sqrt(output_re_packet_log_mag ** 2 + output_im_packet_log_mag ** 2)) output_log_mag = torch.masked_select(output_log_mag, object_mask) loss += self.w_re_im * self.mse(output_re_im, target_re_im) +\ self.w_mag * self.mse(output_log_mag, target_log_mag) +\ self.w_phase * self.mse(phase_output, phase_target) else: print_('WARNING: Not implemented yet.') assert False loss /= num_packets return loss def next_epoch(self): pass self.epoch += 1 if self.epoch % 10 == 0 and self.w_re_im > 0.4: self.w_re_im -= 0.1 self.w_mag = (1 - self.w_re_im) / 2 self.w_phase = (1 - self.w_re_im) / 2 class MSE(_Loss): def __init__(self, size_average=None, reduce=None, reduction='elementwise_mean'): super(MSE, self).__init__(size_average, reduce, reduction) self.mse = nn.MSELoss() def forward(self, output_re_im, target_re_im, object_mask, noise_mask): return self.mse.forward(output_re_im, target_re_im) class ObjectiveFunction(Enum): DELTA_SNR = DeltaSNR() MSE = MSE() MSE_MAG_PHASE_WEIGHTED = MSEWeightedMagPhase() SINR = SINRLoss() def __call__(self, *args): return self.value(*args) @staticmethod def loss_to_running_loss(batch_loss, batch_size): return batch_loss * batch_size @staticmethod def loss_from_running_loss(running_loss, sample_size): return running_loss / sample_size @staticmethod def from_name(value): if value == ObjectiveFunction.DELTA_SNR.name: return ObjectiveFunction.DELTA_SNR elif value == ObjectiveFunction.MSE.name: return ObjectiveFunction.MSE elif value == ObjectiveFunction.MSE_MAG_PHASE_WEIGHTED.name: return ObjectiveFunction.MSE_MAG_PHASE_WEIGHTED elif value == ObjectiveFunction.SINR.name: return ObjectiveFunction.SINR else: return None @staticmethod def objective_func_name(func): try: if func.name in ObjectiveFunction.__members__: return func.name else: return 'None' except AttributeError: return 'None' def sinr_log_mag(log_mag_rd_target, log_mag_rd_test, object_mask, noise_mask): return np.average(log_mag_rd_test[object_mask]) - np.average(log_mag_rd_test[noise_mask]) def sinr(rd_target, rd_test, object_mask, noise_mask): rd_test_mag = np.abs(rd_test)**2 obj_values = rd_test_mag[object_mask] obj_magnitude = np.average(obj_values) noise_values = rd_test_mag[noise_mask] noise_magnitude = np.average(noise_values) return 10 * np.log10(obj_magnitude / noise_magnitude) def sinr_1d(cr_target, cr_test, object_mask, noise_mask): cr_test_mag = np.abs(cr_test)**2 obj_values = cr_test_mag[object_mask] obj_magnitude = np.average(obj_values) noise_values = cr_test_mag[noise_mask] noise_magnitude = np.average(noise_values) return 10 *
np.log10(obj_magnitude / noise_magnitude)
numpy.log10
# -*- coding: utf-8 -*- """ Created on Wed Jul 31 20:05:57 2019 @author: rulix """ import os import logging os.environ['CUDA_VISIBLE_DEVICES'] = '1' os.environ['TF_CPP_MIN_LOG_LEVEL'] = '2' logging.basicConfig( format='%(asctime)-15s %(levelname)s: %(message)s', datefmt='%m/%d/%Y %H:%M:%S', level=logging.INFO) import matplotlib.pyplot as plt import numpy as np import tensorflow as tf from sklearn.cluster import KMeans import sklearn trn_dir = '../data_small/trn/' val_dir = '../data_small/val/' tst_dir = '../data_small/tst/' def metric(y_true, y_pred): kc = sklearn.metrics.cohen_kappa_score(y_true, y_pred) oa = sklearn.metrics.accuracy_score(y_true, y_pred) return oa, kc def LoadNpy(filename=None): npy = np.load(file=filename) image_t1 = npy['image_t1'] image_t1 = image_t1.astype(np.float32)/np.max(image_t1)#-0.5 image_t2 = npy['image_t2'] image_t2 = image_t2.astype(np.float32)/np.max(image_t2)#-0.5 label_t1 = npy['label_t1'] - 1 label_t2 = npy['label_t2'] - 1 return image_t1, image_t2, label_t1, label_t2 def kernel_hik(data_1, data_2): kernel = np.zeros((data_1.shape[0], data_2.shape[0])) for d in range(data_1.shape[1]): column_1 = data_1[:, d].reshape(-1, 1) column_2 = data_2[:, d].reshape(-1, 1) kernel += np.minimum(column_1, column_2.T) return kernel def extract_patch(image=None, ksize=[1,10,10,1], stride=[1,5,5,1]): tf.reset_default_graph() step = 1000 shape = list(np.shape(image)) dim1 = int(shape[1]/stride[1]) dim2 = int(shape[2]/stride[2]) image_patch = np.zeros(shape=(shape[0], dim1, dim2, ksize[1]*ksize[2]*3)) shape[0] = None inputs = tf.placeholder(tf.float32, shape=shape) batch = tf.extract_image_patches(images=inputs, ksizes=ksize, strides=stride, rates=[1,1,1,1], padding='VALID') sess = tf.Session() for k1 in range(0, image_patch.shape[0], step): ub = np.min((image_patch.shape[0],k1+step)) image_patch[k1:ub,:] = sess.run(batch, feed_dict={inputs:image[k1:ub,:]}) sess.close() return image_patch def to_histogram(data, dim=1000): hist_feature = np.zeros((data.shape[0],dim)) for k1 in range(data.shape[0]): vector = data[k1,:] unique_data, counts = np.unique(vector, return_counts=True) hist_feature[k1,unique_data] = counts return hist_feature def extract_feature(file_list, ksize = 10, stride = 10): patch_t1 = None label_t1 = None patch_t2 = None label_t2 = None for file in file_list: image_t1, image_t2, temp_label_t1, temp_label_t2 = LoadNpy(file) temp_patch_t1 = extract_patch(image=image_t1, ksize=[1,ksize,ksize,1], stride=[1,stride,stride,1]) temp_patch_t2 = extract_patch(image=image_t2, ksize=[1,ksize,ksize,1], stride=[1,stride,stride,1]) if patch_t1 is None: patch_t1 = temp_patch_t1 label_t1 = temp_label_t1 patch_t2 = temp_patch_t2 label_t2 = temp_label_t2 else: patch_t1 = np.concatenate((patch_t1,temp_patch_t1),axis=0) label_t1 = np.concatenate((label_t1,temp_label_t1),axis=0) patch_t2 = np.concatenate((patch_t2,temp_patch_t2),axis=0) label_t2 = np.concatenate((label_t2,temp_label_t2),axis=0) patch_t1 = np.reshape(patch_t1, [-1, ksize*stride, 3]) patch_t2 = np.reshape(patch_t2, [-1, ksize*stride, 3]) mean_t1 = np.mean(patch_t1, axis=1) mean_t2 = np.mean(patch_t2, axis=1) std_t1 =
np.std(patch_t1, axis=1)
numpy.std
from __future__ import absolute_import from __future__ import division from __future__ import print_function import math import numpy as np import tensorflow as tf from pysc2.lib import actions from pysc2.lib import features from math import fabs as abs from agents.network import build_net import utils as U _PLAYER_FRIENDLY = 1 _PLAYER_NEUTRAL = 3 # beacon/minerals _PLAYER_HOSTILE = 4 _NO_OP = actions.FUNCTIONS.no_op.id _MOVE_SCREEN = actions.FUNCTIONS.Move_screen.id _ATTACK_SCREEN = actions.FUNCTIONS.Attack_screen.id _SELECT_ARMY = actions.FUNCTIONS.select_army.id _PLAYER_RELATIVE = features.SCREEN_FEATURES.player_relative.index _NOT_QUEUED = [0] _SELECT_ALL = [0] up_left = 0 up = 1 up_right = 2 left = 3 right = 4 left_down = 5 down = 6 right_down = 7 NO_OP = 8 DEBUG = False def filter_enemy_hp(hp_map, normal_map, enemy_id): filtered_map = np.zeros(hp_map.shape) for i in range(hp_map.shape[0]): for j in range(hp_map.shape[-1]): if normal_map[i][j] == enemy_id: filtered_map[i][j] = hp_map[i][j] return filtered_map def turn_hp_into_vector(map, self_x, self_y): row = map.shape[0] col = map.shape[1] self_x = int(self_x) self_y = int(self_y) vec1 = map[0:self_x, 0:self_y] vec2 = map[0:self_x, self_y:] vec3 = map[self_x:, 0:self_y] vec4 = map[self_x:, self_y:] hp1 = np.sum(vec1) hp2 = np.sum(vec2) hp3 = np.sum(vec3) hp4 = np.sum(vec4) res = np.zeros(4) res[0] = hp1 res[1] = hp2 res[2] = hp3 res[3] = hp4 return res def calulate_phase_simple(self_x, self_y, enemy_x, enemy_y): vector = np.zeros(8) phase_dim = -1 delta_x = float(enemy_x - self_x) delta_y = float(enemy_y - self_y) if math.fabs(delta_x) < 0.01 and delta_y <= 0: phase_dim = 6 elif math.fabs(delta_x) < 0.01 and delta_y > 0: phase_dim = 2 else: if delta_x >= 0 and delta_y >= 0 and abs(delta_x) > abs(delta_y): phase_dim = 0 elif delta_x >= 0 and delta_y >= 0 and abs(delta_x) <= abs(delta_y): phase_dim = 1 elif delta_x <= 0 and delta_y >= 0 and abs(delta_x) > abs(delta_y): phase_dim = 2 elif delta_x <= 0 and delta_y >= 0 and abs(delta_x) <= abs(delta_y): phase_dim = 3 elif delta_x <= 0 and delta_y <= 0 and abs(delta_x) > abs(delta_y): phase_dim = 4 elif delta_x <= 0 and delta_y <= 0 and abs(delta_x) <= abs(delta_y): phase_dim = 5 elif delta_x >= 0 and delta_y <= 0 and abs(delta_x) > abs(delta_y): phase_dim = 6 elif delta_x >= 0 and delta_y <= 0 and abs(delta_x) <= abs(delta_y): phase_dim = 7 if phase_dim == -1: print('calulate_phase_simple maybe wrong') return vector else: vector[phase_dim] = 1 return vector def calulate_distance_in_phase_simple(self_x, self_y, enemy_x, enemy_y): vector = np.zeros(8) phase_dim = -1 delta_x = float(enemy_x - self_x) delta_y = float(enemy_y - self_y) distance = math.sqrt(delta_y ** 2 + delta_x ** 2) if delta_x >= 0 and delta_y >= 0 and delta_x > delta_y: phase_dim = 0 elif delta_x >= 0 and delta_y >= 0 and delta_x <= delta_y: phase_dim = 1 elif delta_x <= 0 and delta_y >= 0 and abs(delta_x) > abs(delta_y): phase_dim = 2 elif delta_x <= 0 and delta_y >= 0 and abs(delta_x) <= abs(delta_y): phase_dim = 3 elif delta_x <= 0 and delta_y <= 0 and abs(delta_x) > abs(delta_y): phase_dim = 4 elif delta_x <= 0 and delta_y <= 0 and abs(delta_x) <= abs(delta_y): phase_dim = 5 elif delta_x >= 0 and delta_y <= 0 and abs(delta_x) > abs(delta_y): phase_dim = 6 elif delta_x >= 0 and delta_y <= 0 and abs(delta_x) <= abs(delta_y): phase_dim = 7 if phase_dim == -1: print('maybe wrong in calulate_distance_in_phase_simple') return vector else: vector[phase_dim] = distance return vector def calulate_phase(self_x, self_y, enemy_x, enemy_y): vector = np.zeros(8) phase_dim = -1 delta_x = float(enemy_x - self_x) delta_y = float(enemy_y - self_y) if math.fabs(delta_x) < 0.01 and delta_y <= 0: phase_dim = 6 elif math.fabs(delta_x) < 0.01 and delta_y > 0: phase_dim = 2 else: tan = delta_y / delta_x theta = math.atan(tan) if theta < 0: theta += math.pi if 0 <= theta < (math.pi / 6) or (math.pi * 11 / 6) <= theta < math.pi * 2: phase_dim = 0 elif (math.pi / 6) <= theta < (math.pi / 3): phase_dim = 1 elif (math.pi / 3) <= theta < (math.pi / 3 + math.pi / 6): phase_dim = 2 elif (math.pi / 3 + math.pi / 6) <= theta < (math.pi / 3 + math.pi / 3): phase_dim = 3 elif (math.pi * 2 / 3) <= theta < (math.pi * 2 / 3 + math.pi / 6): phase_dim = 4 elif (math.pi * 2 / 3 + math.pi / 6) <= theta < (math.pi * 2 / 3 + math.pi / 3): phase_dim = 5 elif (math.pi * 2 / 3 + math.pi / 3) <= theta < (math.pi * 2 / 3 + math.pi / 3 + math.pi / 6): phase_dim = 6 elif (math.pi * 4 / 3) <= theta <= (math.pi * 4 / 3 + math.pi / 6): phase_dim = 7 if phase_dim == -1: return vector else: vector[phase_dim] = 1 return vector def calulate_distance_in_phase(self_x, self_y, enemy_x, enemy_y): vector = np.zeros(8) phase_dim = -1 delta_x = float(enemy_x - self_x) delta_y = float(enemy_y - self_y) distance = math.sqrt(delta_x ** 2 + delta_y ** 2) if math.fabs(delta_x) < 0.01 and delta_y < 0: phase_dim = 6 elif math.fabs(delta_x) < 0.01 and delta_y > 0: phase_dim = 2 else: tan = delta_y / delta_x theta = math.atan(tan) if theta < 0: theta += math.pi if 0 <= theta < (math.pi / 6) or (math.pi * 11 / 6) <= theta < math.pi * 2: phase_dim = 0 elif (math.pi / 6) <= theta < (math.pi / 3): phase_dim = 1 elif (math.pi / 3) <= theta < (math.pi / 3 + math.pi / 6): phase_dim = 2 elif (math.pi / 3 + math.pi / 6) <= theta < (math.pi / 3 + math.pi / 3): phase_dim = 3 elif (math.pi * 2 / 3) <= theta < (math.pi * 2 / 3 + math.pi / 6): phase_dim = 4 elif (math.pi * 2 / 3 + math.pi / 6) <= theta < (math.pi * 2 / 3 + math.pi / 3): phase_dim = 5 elif (math.pi * 2 / 3 + math.pi / 3) <= theta < (math.pi * 2 / 3 + math.pi / 3 + math.pi / 6): phase_dim = 6 elif (math.pi * 4 / 3) <= theta <= (math.pi * 4 / 3 + math.pi / 6): phase_dim = 7 if phase_dim == -1: return vector else: vector[phase_dim] = distance return vector def calulate_enemy_num_distribution(self_x, self_y, enemy_x_list, enemy_y_list): total_vector = np.zeros(8) for index, one in enumerate(enemy_x_list): vec_tmp = calulate_phase_simple(self_x, self_y, one, enemy_y_list[index]) total_vector += vec_tmp return total_vector def calulate_enemy_distance_distribution(self_x, self_y, enemy_x_list, enemy_y_list): total_vector = list() for index, one in enumerate(enemy_x_list): vec_tmp = calulate_distance_in_phase_simple(self_x, self_y, one, enemy_y_list[index]) total_vector.append((vec_tmp, np.linalg.norm(vec_tmp))) total_vector = sorted(total_vector, key=lambda x: x[1]) return total_vector[0][0] def get_group_x_y(player_selected): selected_y, selected_x = (player_selected == _PLAYER_FRIENDLY).nonzero() if len(selected_x) == 0 or len(selected_y) == 0: return -1, -1 mean_x =
np.mean(selected_x)
numpy.mean
import argparse import csv from collections import defaultdict from get_schema import build_schema, build_schema_from_desc, build_schema_from_str_table import tensorflow as tf from tensorflow import keras import json from keras.models import Sequential from keras.layers import Dense import multiprocessing as mp # import stanfordnlp import stanza import yake import pickle as p import random from sklearn.svm import SVR, SVC from sklearn.pipeline import make_pipeline from sklearn.preprocessing import StandardScaler from sklearn.metrics import mean_squared_error, f1_score, precision_score, recall_score, confusion_matrix import sys import numpy as np glove_vector_dict = None total_glove = 0 unk_glove = 0 binary_threshold = 3.0 ds_count = 40000 # build pipelines nlp_pipeline = stanza.Pipeline('en') kw_extractor = yake.KeywordExtractor(n=2) class QuestionData: def __init__(self, hit_id): self.hit_id = hit_id self.title = None self.category = None self.question = None self.question_schema = None self.desc_schema = None self.metadata_schema = None self.missing_info_scores = [] self.usefulness_scores = [] def add_annotations(self, missing_info_score, usefulness_score): self.missing_info_scores.append(missing_info_score) self.usefulness_scores.append(usefulness_score) def add_question_details(self, title, category, question, question_schema, desc_schema, metadata_schema): self.title = title self.category = category self.question = question self.question_schema = question_schema self.desc_schema = desc_schema self.metadata_schema = metadata_schema def svr_model(X_train, y_train, X_test, y_test): regr = make_pipeline(StandardScaler(), SVR(C=1.0, epsilon=0.3)) regr.fit(X_train, y_train) y_test_bar = regr.predict(X_test) print(mean_squared_error(y_test, y_test_bar)) return y_test_bar print('True\tPredicted') for i in range(100): print('%.6f\t%.6f' % (y_test[i], y_test_bar[i])) def svc_model(X_train, y_train, X_test, y_test, ds_X_test, ds_y_test, full_amazon_feature_set): # clf = make_pipeline(StandardScaler(), SVC(class_weight={0: 2, 1: 1})) clf = make_pipeline(StandardScaler(), SVC(probability=True)) clf.fit(X_train, y_train) y_test_bar = clf.predict(X_test) print('F1: %.3f' % f1_score(y_test, y_test_bar)) print('Precision: %.3f' % precision_score(y_test, y_test_bar)) print('Recall: %.3f' % recall_score(y_test, y_test_bar)) print('Confusion Matrix') print(confusion_matrix(y_test, y_test_bar)) print('DS test set scores') # for item in ds_X_test: # try: # clf.predict([item]) # except: # import pdb; pdb.set_trace() ds_y_test_bar = clf.predict(ds_X_test) print('F1: %.3f' % f1_score(ds_y_test, ds_y_test_bar)) print('Precision: %.3f' % precision_score(ds_y_test, ds_y_test_bar)) print('Recall: %.3f' % recall_score(ds_y_test, ds_y_test_bar)) print('Confusion Matrix') print(confusion_matrix(ds_y_test, ds_y_test_bar)) p.dump(clf, open('question_ranker_ds.svc_model.p', 'wb')) print('Saved classifier') full_amazon_pred_binary_labels = clf.predict(full_amazon_feature_set) print('Done predicting binary labels') N = len(full_amazon_feature_set) num_cpus = mp.cpu_count() print('No. of cpus %d' % num_cpus) batch_size = 1000 pool = mp.Pool(num_cpus) pred_probs = [] for i in range(int(N/batch_size)+1): pred_probs += list(pool.apply(clf_predict, args=(clf, full_amazon_feature_set[i*batch_size:(i+1)*batch_size]))) print('Done predicting probabilities') full_amazon_pred_real_labels = [] for i in range(len(full_amazon_pred_binary_labels)): if full_amazon_pred_binary_labels[i] == 0: real_label = min(pred_probs[i]) elif full_amazon_pred_binary_labels[i] == 1: real_label = max(pred_probs[i]) else: assert(False) full_amazon_pred_real_labels.append(real_label) print('Done predicting real labels') return full_amazon_pred_binary_labels, full_amazon_pred_real_labels def feedfoward_regr_model(X_train, y_train, X_test, y_test): model = Sequential() model.add(Dense(100, input_dim=len(X_train[0]), activation='relu')) model.add(Dense(50, activation='relu')) model.add(Dense(1, activation='linear')) # compile the keras model model.compile(loss='mse', optimizer='adam', metrics=['mse','mae']) # fit the keras model on the dataset model.fit(np.array(X_train), np.array(y_train), epochs=10, batch_size=100) # evaluate the keras model results = model.evaluate(np.array(X_test), np.array(y_test)) print("test loss, test acc:", results) y_test_bar = model.predict(np.array(X_test)) print(mean_squared_error(y_test, y_test_bar)) return y_test_bar print('True\tPredicted') for i in range(100): print('%.6f\t%.6f' % (y_test[i], y_test_bar[i])) def feedfoward_clf_model(X_train, y_train, X_test, y_test): model = Sequential() model.add(Dense(100, input_dim=len(X_train[0]), activation='relu')) model.add(Dense(50, activation='relu')) model.add(Dense(1, activation='softmax')) # compile the keras model model.compile(loss='binary_crossentropy', optimizer='adam', metrics=['accuracy']) # fit the keras model on the dataset model.fit(np.array(X_train), np.array(y_train), epochs=50, batch_size=200) # evaluate the keras model results = model.evaluate(np.array(X_test), np.array(y_test)) print("test loss, test acc:", results) y_test_bar = model.predict(np.array(X_test)) print('F1: %.3f' % f1_score(y_test, y_test_bar)) print('Precision: %.3f' % precision_score(y_test, y_test_bar)) print('Recall: %.3f' % recall_score(y_test, y_test_bar)) print('Confusion Matrix') print(confusion_matrix(y_test, y_test_bar)) return y_test_bar def get_glove_vector(word): global total_glove, unk_glove word = word.lower() total_glove += 1 if word in glove_vector_dict: return glove_vector_dict[word] # print(word) # import pdb; pdb.set_trace() unk_glove += 1 return glove_vector_dict['unk'] def load_glove_vectors(vectors_file): vector_dict = {} for line in open(vectors_file, 'r', encoding="utf-8").readlines(): word, vector_str = line.split(' ', 1) vector = [float(v) for v in vector_str.split(' ')] vector_dict[word] = vector return vector_dict def get_asin(amazon_schema, title, category): for asin in amazon_schema: if amazon_schema[asin]['title'].replace('&amp;', '&') == title: return asin print('Failed to find asin for title: %s' % (title)) def read_mturk_data(mturk_annotations_file): all_questions_data = defaultdict(QuestionData) with open(mturk_annotations_file) as csv_results_file: csv_reader = csv.DictReader(csv_results_file) for row in csv_reader: hit_id = row['HITId'] if hit_id not in all_questions_data: title = row['Input.title'] category = row['Input.category'] description = row['Input.description'] desc_schema = build_schema_from_desc(description, kw_extractor) metadata = row['Input.metadata'] metadata_schema = build_schema_from_str_table(metadata) question = row['Input.question'] question_schema = build_schema(question.lower(), nlp_pipeline, kw_extractor) question_data = QuestionData(hit_id) question_data.add_question_details(title, category, question, question_schema, desc_schema, metadata_schema) all_questions_data[hit_id] = question_data for i in range(1, 6): if row['Answer.missing_info_%d.%d' %(i, i)] == 'true': missing_info_score = i for i in range(6): if row['Answer.usefulness_%d.%d' % (i, i)] == 'true': usefulness_score = i all_questions_data[hit_id].add_annotations(missing_info_score, usefulness_score) p.dump(all_questions_data, open('all_questions_data.p', 'wb')) def main(args): # if args.mturk_annotations_file: # read_mturk_data(args.mturk_annotations_file) # return amazon_schema = json.load(open(args.amazon_schema_json_file)) all_questions_data = p.load(open('all_questions_data.p', 'rb')) global glove_vector_dict glove_vector_dict = load_glove_vectors(args.amazon_glove_vectors) feature_set = [] labels = [] human_true_labels = [] human_pred_labels = [] # mturk_questions_dict = {} for hit_id in all_questions_data: category = all_questions_data[hit_id].category title = all_questions_data[hit_id].title question_schema = all_questions_data[hit_id].question_schema desc_schema = all_questions_data[hit_id].desc_schema metadata_schema = all_questions_data[hit_id].metadata_schema if question_schema == []: # print('Empty schema for %s' % all_questions_data[hit_id].question) question_schema = [all_questions_data[hit_id].question.lower()] real_label = np.mean(all_questions_data[hit_id].usefulness_scores) label = 1 if real_label >= binary_threshold else 0 # mturk_questions_data = {'title': title, # 'category': category, # 'question': all_questions_data[hit_id].question, # 'question_schema': question_schema, # 'description_schema': desc_schema, # 'table_schema': metadata_schema, # 'real_label': real_label, # 'binary_label': label} # mturk_questions_dict[hit_id] = mturk_questions_data category_vec = np.mean(np.array([get_glove_vector(w) for w in category.split(' ')]), axis=0) title_vec = np.mean(np.array([get_glove_vector(w) for w in title.split(' ')]), axis=0) desc_schema_vecs = [] for item in desc_schema: if isinstance(item, str): desc_schema_vec = np.mean(np.array([get_glove_vector(w) for w in item.split(' ')]), axis=0) elif isinstance(item, tuple): desc_schema_vec = np.mean(np.array([get_glove_vector(w) for w in item[:-1]]), axis=0) #TODO: Assign vector for relation in tuple (currently ignored) else: assert(False) desc_schema_vecs.append(desc_schema_vec) desc_schema_vec = np.mean(desc_schema_vecs, axis=0) if metadata_schema == []: metadata_schema_vec = np.zeros(len(title_vec)) else: metadata_schema_vec = np.mean(np.array([get_glove_vector(w) for w in metadata_schema]), axis=0) for item in question_schema: if isinstance(item, str): question_schema_vec = np.mean(np.array([get_glove_vector(w) for w in item.split(' ')]), axis=0) elif isinstance(item, tuple): question_schema_vec = np.mean(np.array([get_glove_vector(w) for w in item[:-1]]), axis=0) #TODO: Assign vector for relation in tuple (currently ignored) else: assert(False) desc_schema_vec = np.mean([desc_schema_vec, metadata_schema_vec], axis=0) title_vec = np.mean([category_vec, title_vec], axis=0) # feature_set.append(np.concatenate((category_vec, title_vec, desc_schema_vec, metadata_schema_vec, question_schema_vec), axis=0)) feature_set.append(
np.concatenate((title_vec, desc_schema_vec, question_schema_vec), axis=0)
numpy.concatenate
# -*- coding: utf-8 -*- ''' Classes to solve the steady state of liquid and illiquid assets model ''' from __future__ import print_function import sys sys.path.insert(0,'../') import numpy as np import scipy as sc from scipy.stats import norm from scipy.interpolate import interp1d, interp2d, griddata, RegularGridInterpolator from scipy import sparse as sp import time from SharedFunc3 import Transition, ExTransitions, GenWeight, MakeGridkm, Tauchen, Fastroot class SteadyStateTwoAsset: ''' Classes to solve the steady state of liquid and illiquid assets model ''' def __init__(self, par, mpar, grid): self.par = par self.mpar = mpar self.grid = grid def SolveSteadyState(self): ''' solve for steady state returns ---------- par : dict parametres mpar : dict parametres grid: dict grid for solution Output : float steady state output targets : dict steady state stats Vm : np.array marginal value of assets m Vk : np.array marginal value of assets m joint_distr : np.array joint distribution of m and h Copula : dict points for interpolation of joint distribution c_a_star : np.array policy function for consumption w/ adjustment c_n_star : np.array policy function for consumption w/o adjustment psi_star : np.array continuation value of holding capital m_a_star : np.array policy function for asset m w/ adjustment m_n_star : np.array policy function for asset m w/o adjustment mutil_c_a : np.array marginal utility of c w/ adjustment mutil_c_n : np.array marginal utility of c w/o adjustment mutil_c : np.array marginal utility of c w/ & w/o adjustment P_H : np.array transition probability ''' ## Set grid h grid = self.grid resultStVar=self.StochasticsVariance(self.par, self.mpar, grid) P_H = resultStVar['P_H'].copy() grid = resultStVar['grid'].copy() par = resultStVar['par'].copy() grid = MakeGridkm(self.mpar, grid, grid['k_min'], grid['k_max'], grid['m_min'], grid['m_max']) meshes = {} meshes['m'], meshes['k'], meshes['h'] = np.meshgrid(grid['m'],grid['k'],grid['h'],indexing='ij') ## Solve for steady state capital by bi-section result_SS = self.SteadyState(P_H, grid, meshes, self.mpar, par) c_n_guess = result_SS['c_n_guess'].copy() m_n_star = result_SS['m_n_star'].copy() c_a_guess = result_SS['c_a_guess'].copy() m_a_star = result_SS['m_a_star'].copy() cap_a_star = result_SS['cap_a_star'].copy() psi_guess = result_SS['psi_guess'].copy() joint_distr = result_SS['joint_distr'].copy() R_fc = result_SS['R_fc'] W_fc = result_SS['W_fc'] Profits_fc = result_SS['Profits_fc'] Output = result_SS['Output'] grid = result_SS['grid'].copy() ## SS stats mesh ={} mesh['m'],mesh['k'] =np.meshgrid(grid['m'].copy(),grid['k'].copy(), indexing = 'ij') targets = {} targets['ShareBorrower'] = np.sum((grid['m']<0)*np.transpose(np.sum(np.sum(joint_distr.copy(),axis = 1), axis = 1))) targets['K'] = np.sum(grid['k'].copy()*np.sum(np.sum(joint_distr.copy(),axis =0),axis=1)) targets['B'] = np.dot(grid['m'].copy(),np.sum(np.sum(joint_distr.copy(),axis = 1),axis = 1)) grid['K'] = targets['K'] grid['B'] = targets['B'] JDredux = np.sum(joint_distr.copy(),axis =2) targets['BoverK'] = targets['B']/targets['K'] targets['L'] = grid['N']*np.sum(np.dot(grid['h'].copy(),np.sum(np.sum(joint_distr.copy(),axis=0),axis=0))) targets['KY'] = targets['K']/Output targets['BY'] = targets['B']/Output targets['Y'] = Output BCaux_M = np.sum(np.sum(joint_distr.copy(),axis =1), axis=1) targets['m_bc'] = BCaux_M[0].copy() targets['m_0'] = float(BCaux_M[grid['m']==0].copy()) BCaux_K = np.sum(np.sum(joint_distr.copy(),axis=0),axis=1) targets['k_bc'] = BCaux_K[0].copy() aux_MK = np.sum(joint_distr.copy(),axis=2) targets['WtH_b0']=np.sum(aux_MK[(mesh['m']==0)*(mesh['k']>0)].copy()) targets['WtH_bnonpos']=np.sum(aux_MK[(mesh['m']<=0)*(mesh['k']>0)].copy()) targets['T'] =(1.0-par['tau'])*W_fc*grid['N'] +(1.0-par['tau'])*Profits_fc par['G']=targets['B']*(1.0-par['RB']/par['PI'])+targets['T'] par['R']=R_fc par['W']=W_fc par['PROFITS']=Profits_fc par['N']=grid['N'] targets['GtoY']=par['G']/Output ## Ginis # Net worth Gini mplusk=mesh['k'].copy().flatten('F')*par['Q']+mesh['m'].copy().flatten('F') IX = np.argsort(mplusk.copy()) mplusk = mplusk[IX.copy()].copy() moneycapital_pdf = JDredux.flatten(order='F')[IX].copy() moneycapital_cdf = np.cumsum(moneycapital_pdf.copy()) targets['NegNetWorth']= np.sum((mplusk.copy()<0)*moneycapital_pdf.copy()) S = np.cumsum(moneycapital_pdf.copy()*mplusk.copy()) S = np.concatenate(([0.], S.copy())) targets['GiniW'] = 1.0-(np.sum(moneycapital_pdf.copy()*(S[:-1].copy()+S[1:].copy()).transpose())/S[-1]) # Liquid Gini IX = np.argsort(mesh['m'].copy().flatten('F')) liquid_sort = mesh['m'].copy().flatten('F')[IX.copy()].copy() liquid_pdf = JDredux.flatten(order='F')[IX.copy()].copy() liquid_cdf = np.cumsum(liquid_pdf.copy()) targets['Negliquid'] = np.sum((liquid_sort.copy()<0)*liquid_pdf.copy()) S = np.cumsum(liquid_pdf.copy()*liquid_sort.copy()) S = np.concatenate(([0.], S.copy())) targets['GiniLI'] = 1.0-(np.sum(liquid_pdf.copy()*(S[:-1].copy()+S[1:].copy()))/S[-1].copy()) # Illiquid Gini IX = np.argsort(mesh['k'].copy().flatten('F')) illiquid_sort = mesh['k'].copy().flatten('F')[IX.copy()].copy() illiquid_pdf = JDredux.flatten(order='F')[IX.copy()].copy() illiquid_cdf = np.cumsum(illiquid_pdf.copy()); targets['Negliquid'] = np.sum((illiquid_sort.copy()<0)*illiquid_pdf.copy()) S = np.cumsum(illiquid_pdf.copy()*illiquid_sort.copy()) S = np.concatenate(([0.], S.copy())) targets['GiniIL'] = 1.-(np.sum(illiquid_pdf.copy()*(S[:-1].copy()+S[1:].copy()))/S[-1].copy()) ## MPCs meshesm, meshesk, meshesh = np.meshgrid(grid['m'],grid['k'],grid['h'],indexing='ij') NW = par['gamma']/(1.+par['gamma'])*(par['N']/par['H'])*par['W'] WW = NW*
np.ones((self.mpar['nm'],self.mpar['nk'],self.mpar['nh']))
numpy.ones
import json import os import numpy as np import time from copy import deepcopy from .track import Track from .geom import Circle from .geom import Line from .geom import check_for_intersection_lineseg_lineseg from .geom import calc_angle_between_unit_vectors from .lidar import Lidar class Vehicle(object): def __init__(self, id: int, track: Track, aLidarFOVFront: float, aLidarFOVL: float, aLidarFOVR: float, task_rate=0.01, auto_reset=True): """ Initialise the vehicle object """ # save the arguments self.id = id self.track = track self.aLidarFOVFront = aLidarFOVFront * np.pi / 180 self.aLidarFOVL = aLidarFOVL * np.pi / 180 self.aLidarFOVR = aLidarFOVR * np.pi / 180 self.bAutoReset = auto_reset self.tTask = task_rate # Get the module path self.module_path = os.path.dirname(os.path.abspath(__file__)) # load the config file with open(self.module_path + '/../setup/vehicle_config.json', 'r') as f: self.config = json.load(f) # create the car corner point offsets self.carFLOffset =
np.array([self.config['xVehicleLength'] * self.config['rCOGLongR'], -0.5 * self.config['xVehicleWidth']])
numpy.array
# This module has been generated automatically from space group information # obtained from the Computational Crystallography Toolbox # """ Space groups This module contains a list of all the 230 space groups that can occur in a crystal. The variable space_groups contains a dictionary that maps space group numbers and space group names to the corresponding space group objects. .. moduleauthor:: <NAME> <<EMAIL>> """ #----------------------------------------------------------------------------- # Copyright (C) 2013 The Mosaic Development Team # # Distributed under the terms of the BSD License. The full license is in # the file LICENSE.txt, distributed as part of this software. #----------------------------------------------------------------------------- import numpy as N class SpaceGroup(object): """ Space group All possible space group objects are created in this module. Other modules should access these objects through the dictionary space_groups rather than create their own space group objects. """ def __init__(self, number, symbol, transformations): """ :param number: the number assigned to the space group by international convention :type number: int :param symbol: the Hermann-Mauguin space-group symbol as used in PDB and mmCIF files :type symbol: str :param transformations: a list of space group transformations, each consisting of a tuple of three integer arrays (rot, tn, td), where rot is the rotation matrix and tn/td are the numerator and denominator of the translation vector. The transformations are defined in fractional coordinates. :type transformations: list """ self.number = number self.symbol = symbol self.transformations = transformations self.transposed_rotations = N.array([N.transpose(t[0]) for t in transformations]) self.phase_factors = N.exp(N.array([(-2j*N.pi*t[1])/t[2] for t in transformations])) def __repr__(self): return "SpaceGroup(%d, %s)" % (self.number, repr(self.symbol)) def __len__(self): """ :return: the number of space group transformations :rtype: int """ return len(self.transformations) def symmetryEquivalentMillerIndices(self, hkl): """ :param hkl: a set of Miller indices :type hkl: Scientific.N.array_type :return: a tuple (miller_indices, phase_factor) of two arrays of length equal to the number of space group transformations. miller_indices contains the Miller indices of each reflection equivalent by symmetry to the reflection hkl (including hkl itself as the first element). phase_factor contains the phase factors that must be applied to the structure factor of reflection hkl to obtain the structure factor of the symmetry equivalent reflection. :rtype: tuple """ hkls = N.dot(self.transposed_rotations, hkl) p = N.multiply.reduce(self.phase_factors**hkl, -1) return hkls, p space_groups = {} transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(1, 'P 1', transformations) space_groups[1] = sg space_groups['P 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(2, 'P -1', transformations) space_groups[2] = sg space_groups['P -1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(3, 'P 1 2 1', transformations) space_groups[3] = sg space_groups['P 1 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(4, 'P 1 21 1', transformations) space_groups[4] = sg space_groups['P 1 21 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(5, 'C 1 2 1', transformations) space_groups[5] = sg space_groups['C 1 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(6, 'P 1 m 1', transformations) space_groups[6] = sg space_groups['P 1 m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(7, 'P 1 c 1', transformations) space_groups[7] = sg space_groups['P 1 c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(8, 'C 1 m 1', transformations) space_groups[8] = sg space_groups['C 1 m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(9, 'C 1 c 1', transformations) space_groups[9] = sg space_groups['C 1 c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(10, 'P 1 2/m 1', transformations) space_groups[10] = sg space_groups['P 1 2/m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(11, 'P 1 21/m 1', transformations) space_groups[11] = sg space_groups['P 1 21/m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(12, 'C 1 2/m 1', transformations) space_groups[12] = sg space_groups['C 1 2/m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(13, 'P 1 2/c 1', transformations) space_groups[13] = sg space_groups['P 1 2/c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(14, 'P 1 21/c 1', transformations) space_groups[14] = sg space_groups['P 1 21/c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(15, 'C 1 2/c 1', transformations) space_groups[15] = sg space_groups['C 1 2/c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(16, 'P 2 2 2', transformations) space_groups[16] = sg space_groups['P 2 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(17, 'P 2 2 21', transformations) space_groups[17] = sg space_groups['P 2 2 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(18, 'P 21 21 2', transformations) space_groups[18] = sg space_groups['P 21 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(19, 'P 21 21 21', transformations) space_groups[19] = sg space_groups['P 21 21 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(20, 'C 2 2 21', transformations) space_groups[20] = sg space_groups['C 2 2 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(21, 'C 2 2 2', transformations) space_groups[21] = sg space_groups['C 2 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(22, 'F 2 2 2', transformations) space_groups[22] = sg space_groups['F 2 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(23, 'I 2 2 2', transformations) space_groups[23] = sg space_groups['I 2 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(24, 'I 21 21 21', transformations) space_groups[24] = sg space_groups['I 21 21 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(25, 'P m m 2', transformations) space_groups[25] = sg space_groups['P m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(26, 'P m c 21', transformations) space_groups[26] = sg space_groups['P m c 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(27, 'P c c 2', transformations) space_groups[27] = sg space_groups['P c c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(28, 'P m a 2', transformations) space_groups[28] = sg space_groups['P m a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(29, 'P c a 21', transformations) space_groups[29] = sg space_groups['P c a 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(30, 'P n c 2', transformations) space_groups[30] = sg space_groups['P n c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(31, 'P m n 21', transformations) space_groups[31] = sg space_groups['P m n 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(32, 'P b a 2', transformations) space_groups[32] = sg space_groups['P b a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(33, 'P n a 21', transformations) space_groups[33] = sg space_groups['P n a 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(34, 'P n n 2', transformations) space_groups[34] = sg space_groups['P n n 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(35, 'C m m 2', transformations) space_groups[35] = sg space_groups['C m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(36, 'C m c 21', transformations) space_groups[36] = sg space_groups['C m c 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(37, 'C c c 2', transformations) space_groups[37] = sg space_groups['C c c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(38, 'A m m 2', transformations) space_groups[38] = sg space_groups['A m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(39, 'A b m 2', transformations) space_groups[39] = sg space_groups['A b m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(40, 'A m a 2', transformations) space_groups[40] = sg space_groups['A m a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(41, 'A b a 2', transformations) space_groups[41] = sg space_groups['A b a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(42, 'F m m 2', transformations) space_groups[42] = sg space_groups['F m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(43, 'F d d 2', transformations) space_groups[43] = sg space_groups['F d d 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(44, 'I m m 2', transformations) space_groups[44] = sg space_groups['I m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(45, 'I b a 2', transformations) space_groups[45] = sg space_groups['I b a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(46, 'I m a 2', transformations) space_groups[46] = sg space_groups['I m a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(47, 'P m m m', transformations) space_groups[47] = sg space_groups['P m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(48, 'P n n n :2', transformations) space_groups[48] = sg space_groups['P n n n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(49, 'P c c m', transformations) space_groups[49] = sg space_groups['P c c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(50, 'P b a n :2', transformations) space_groups[50] = sg space_groups['P b a n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(51, 'P m m a', transformations) space_groups[51] = sg space_groups['P m m a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(52, 'P n n a', transformations) space_groups[52] = sg space_groups['P n n a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(53, 'P m n a', transformations) space_groups[53] = sg space_groups['P m n a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(54, 'P c c a', transformations) space_groups[54] = sg space_groups['P c c a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(55, 'P b a m', transformations) space_groups[55] = sg space_groups['P b a m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(56, 'P c c n', transformations) space_groups[56] = sg space_groups['P c c n'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(57, 'P b c m', transformations) space_groups[57] = sg space_groups['P b c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(58, 'P n n m', transformations) space_groups[58] = sg space_groups['P n n m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(59, 'P m m n :2', transformations) space_groups[59] = sg space_groups['P m m n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(60, 'P b c n', transformations) space_groups[60] = sg space_groups['P b c n'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(61, 'P b c a', transformations) space_groups[61] = sg space_groups['P b c a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(62, 'P n m a', transformations) space_groups[62] = sg space_groups['P n m a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(63, 'C m c m', transformations) space_groups[63] = sg space_groups['C m c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(64, 'C m c a', transformations) space_groups[64] = sg space_groups['C m c a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(65, 'C m m m', transformations) space_groups[65] = sg space_groups['C m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(66, 'C c c m', transformations) space_groups[66] = sg space_groups['C c c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(67, 'C m m a', transformations) space_groups[67] = sg space_groups['C m m a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(68, 'C c c a :2', transformations) space_groups[68] = sg space_groups['C c c a :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(69, 'F m m m', transformations) space_groups[69] = sg space_groups['F m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,3,3]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,0,3]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(70, 'F d d d :2', transformations) space_groups[70] = sg space_groups['F d d d :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(71, 'I m m m', transformations) space_groups[71] = sg space_groups['I m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(72, 'I b a m', transformations) space_groups[72] = sg space_groups['I b a m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(73, 'I b c a', transformations) space_groups[73] = sg space_groups['I b c a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(74, 'I m m a', transformations) space_groups[74] = sg space_groups['I m m a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(75, 'P 4', transformations) space_groups[75] = sg space_groups['P 4'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(76, 'P 41', transformations) space_groups[76] = sg space_groups['P 41'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(77, 'P 42', transformations) space_groups[77] = sg space_groups['P 42'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(78, 'P 43', transformations) space_groups[78] = sg space_groups['P 43'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(79, 'I 4', transformations) space_groups[79] = sg space_groups['I 4'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(80, 'I 41', transformations) space_groups[80] = sg space_groups['I 41'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(81, 'P -4', transformations) space_groups[81] = sg space_groups['P -4'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(82, 'I -4', transformations) space_groups[82] = sg space_groups['I -4'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(83, 'P 4/m', transformations) space_groups[83] = sg space_groups['P 4/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(84, 'P 42/m', transformations) space_groups[84] = sg space_groups['P 42/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(85, 'P 4/n :2', transformations) space_groups[85] = sg space_groups['P 4/n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(86, 'P 42/n :2', transformations) space_groups[86] = sg space_groups['P 42/n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(87, 'I 4/m', transformations) space_groups[87] = sg space_groups['I 4/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-3,-3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,5,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(88, 'I 41/a :2', transformations) space_groups[88] = sg space_groups['I 41/a :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(89, 'P 4 2 2', transformations) space_groups[89] = sg space_groups['P 4 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(90, 'P 4 21 2', transformations) space_groups[90] = sg space_groups['P 4 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(91, 'P 41 2 2', transformations) space_groups[91] = sg space_groups['P 41 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(92, 'P 41 21 2', transformations) space_groups[92] = sg space_groups['P 41 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(93, 'P 42 2 2', transformations) space_groups[93] = sg space_groups['P 42 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(94, 'P 42 21 2', transformations) space_groups[94] = sg space_groups['P 42 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(95, 'P 43 2 2', transformations) space_groups[95] = sg space_groups['P 43 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(96, 'P 43 21 2', transformations) space_groups[96] = sg space_groups['P 43 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(97, 'I 4 2 2', transformations) space_groups[97] = sg space_groups['I 4 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(98, 'I 41 2 2', transformations) space_groups[98] = sg space_groups['I 41 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(99, 'P 4 m m', transformations) space_groups[99] = sg space_groups['P 4 m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(100, 'P 4 b m', transformations) space_groups[100] = sg space_groups['P 4 b m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(101, 'P 42 c m', transformations) space_groups[101] = sg space_groups['P 42 c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(102, 'P 42 n m', transformations) space_groups[102] = sg space_groups['P 42 n m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(103, 'P 4 c c', transformations) space_groups[103] = sg space_groups['P 4 c c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(104, 'P 4 n c', transformations) space_groups[104] = sg space_groups['P 4 n c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(105, 'P 42 m c', transformations) space_groups[105] = sg space_groups['P 42 m c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(106, 'P 42 b c', transformations) space_groups[106] = sg space_groups['P 42 b c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(107, 'I 4 m m', transformations) space_groups[107] = sg space_groups['I 4 m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(108, 'I 4 c m', transformations) space_groups[108] = sg space_groups['I 4 c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(109, 'I 41 m d', transformations) space_groups[109] = sg space_groups['I 41 m d'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(110, 'I 41 c d', transformations) space_groups[110] = sg space_groups['I 41 c d'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(111, 'P -4 2 m', transformations) space_groups[111] = sg space_groups['P -4 2 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(112, 'P -4 2 c', transformations) space_groups[112] = sg space_groups['P -4 2 c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(113, 'P -4 21 m', transformations) space_groups[113] = sg space_groups['P -4 21 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(114, 'P -4 21 c', transformations) space_groups[114] = sg space_groups['P -4 21 c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(115, 'P -4 m 2', transformations) space_groups[115] = sg space_groups['P -4 m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(116, 'P -4 c 2', transformations) space_groups[116] = sg space_groups['P -4 c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(117, 'P -4 b 2', transformations) space_groups[117] = sg space_groups['P -4 b 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(118, 'P -4 n 2', transformations) space_groups[118] = sg space_groups['P -4 n 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(119, 'I -4 m 2', transformations) space_groups[119] = sg space_groups['I -4 m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(120, 'I -4 c 2', transformations) space_groups[120] = sg space_groups['I -4 c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(121, 'I -4 2 m', transformations) space_groups[121] = sg space_groups['I -4 2 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(122, 'I -4 2 d', transformations) space_groups[122] = sg space_groups['I -4 2 d'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(123, 'P 4/m m m', transformations) space_groups[123] = sg space_groups['P 4/m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(124, 'P 4/m c c', transformations) space_groups[124] = sg space_groups['P 4/m c c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(125, 'P 4/n b m :2', transformations) space_groups[125] = sg space_groups['P 4/n b m :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(126, 'P 4/n n c :2', transformations) space_groups[126] = sg space_groups['P 4/n n c :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(127, 'P 4/m b m', transformations) space_groups[127] = sg space_groups['P 4/m b m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(128, 'P 4/m n c', transformations) space_groups[128] = sg space_groups['P 4/m n c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(129, 'P 4/n m m :2', transformations) space_groups[129] = sg space_groups['P 4/n m m :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(130, 'P 4/n c c :2', transformations) space_groups[130] = sg space_groups['P 4/n c c :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(131, 'P 42/m m c', transformations) space_groups[131] = sg space_groups['P 42/m m c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(132, 'P 42/m c m', transformations) space_groups[132] = sg space_groups['P 42/m c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(133, 'P 42/n b c :2', transformations) space_groups[133] = sg space_groups['P 42/n b c :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(134, 'P 42/n n m :2', transformations) space_groups[134] = sg space_groups['P 42/n n m :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(135, 'P 42/m b c', transformations) space_groups[135] = sg space_groups['P 42/m b c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(136, 'P 42/m n m', transformations) space_groups[136] = sg space_groups['P 42/m n m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(137, 'P 42/n m c :2', transformations) space_groups[137] = sg space_groups['P 42/n m c :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(138, 'P 42/n c m :2', transformations) space_groups[138] = sg space_groups['P 42/n c m :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(139, 'I 4/m m m', transformations) space_groups[139] = sg space_groups['I 4/m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(140, 'I 4/m c m', transformations) space_groups[140] = sg space_groups['I 4/m c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-3,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-3,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(141, 'I 41/a m d :2', transformations) space_groups[141] = sg space_groups['I 41/a m d :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-3,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-3,-3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,5,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,-1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(142, 'I 41/a c d :2', transformations) space_groups[142] = sg space_groups['I 41/a c d :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(143, 'P 3', transformations) space_groups[143] = sg space_groups['P 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(144, 'P 31', transformations) space_groups[144] = sg space_groups['P 31'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(145, 'P 32', transformations) space_groups[145] = sg space_groups['P 32'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(146, 'R 3 :H', transformations) space_groups[146] = sg space_groups['R 3 :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(147, 'P -3', transformations) space_groups[147] = sg space_groups['P -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(148, 'R -3 :H', transformations) space_groups[148] = sg space_groups['R -3 :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(149, 'P 3 1 2', transformations) space_groups[149] = sg space_groups['P 3 1 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(150, 'P 3 2 1', transformations) space_groups[150] = sg space_groups['P 3 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(151, 'P 31 1 2', transformations) space_groups[151] = sg space_groups['P 31 1 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(152, 'P 31 2 1', transformations) space_groups[152] = sg space_groups['P 31 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(153, 'P 32 1 2', transformations) space_groups[153] = sg space_groups['P 32 1 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(154, 'P 32 2 1', transformations) space_groups[154] = sg space_groups['P 32 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(155, 'R 3 2 :H', transformations) space_groups[155] = sg space_groups['R 3 2 :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(156, 'P 3 m 1', transformations) space_groups[156] = sg space_groups['P 3 m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(157, 'P 3 1 m', transformations) space_groups[157] = sg space_groups['P 3 1 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(158, 'P 3 c 1', transformations) space_groups[158] = sg space_groups['P 3 c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(159, 'P 3 1 c', transformations) space_groups[159] = sg space_groups['P 3 1 c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(160, 'R 3 m :H', transformations) space_groups[160] = sg space_groups['R 3 m :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(161, 'R 3 c :H', transformations) space_groups[161] = sg space_groups['R 3 c :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(162, 'P -3 1 m', transformations) space_groups[162] = sg space_groups['P -3 1 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(163, 'P -3 1 c', transformations) space_groups[163] = sg space_groups['P -3 1 c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(164, 'P -3 m 1', transformations) space_groups[164] = sg space_groups['P -3 m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(165, 'P -3 c 1', transformations) space_groups[165] = sg space_groups['P -3 c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(166, 'R -3 m :H', transformations) space_groups[166] = sg space_groups['R -3 m :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,-1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,-1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,-1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(167, 'R -3 c :H', transformations) space_groups[167] = sg space_groups['R -3 c :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(168, 'P 6', transformations) space_groups[168] = sg space_groups['P 6'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(169, 'P 61', transformations) space_groups[169] = sg space_groups['P 61'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(170, 'P 65', transformations) space_groups[170] = sg space_groups['P 65'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(171, 'P 62', transformations) space_groups[171] = sg space_groups['P 62'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(172, 'P 64', transformations) space_groups[172] = sg space_groups['P 64'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(173, 'P 63', transformations) space_groups[173] = sg space_groups['P 63'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(174, 'P -6', transformations) space_groups[174] = sg space_groups['P -6'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(175, 'P 6/m', transformations) space_groups[175] = sg space_groups['P 6/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(176, 'P 63/m', transformations) space_groups[176] = sg space_groups['P 63/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(177, 'P 6 2 2', transformations) space_groups[177] = sg space_groups['P 6 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(178, 'P 61 2 2', transformations) space_groups[178] = sg space_groups['P 61 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(179, 'P 65 2 2', transformations) space_groups[179] = sg space_groups['P 65 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(180, 'P 62 2 2', transformations) space_groups[180] = sg space_groups['P 62 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(181, 'P 64 2 2', transformations) space_groups[181] = sg space_groups['P 64 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(182, 'P 63 2 2', transformations) space_groups[182] = sg space_groups['P 63 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(183, 'P 6 m m', transformations) space_groups[183] = sg space_groups['P 6 m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(184, 'P 6 c c', transformations) space_groups[184] = sg space_groups['P 6 c c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(185, 'P 63 c m', transformations) space_groups[185] = sg space_groups['P 63 c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(186, 'P 63 m c', transformations) space_groups[186] = sg space_groups['P 63 m c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(187, 'P -6 m 2', transformations) space_groups[187] = sg space_groups['P -6 m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(188, 'P -6 c 2', transformations) space_groups[188] = sg space_groups['P -6 c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(189, 'P -6 2 m', transformations) space_groups[189] = sg space_groups['P -6 2 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(190, 'P -6 2 c', transformations) space_groups[190] = sg space_groups['P -6 2 c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(191, 'P 6/m m m', transformations) space_groups[191] = sg space_groups['P 6/m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(192, 'P 6/m c c', transformations) space_groups[192] = sg space_groups['P 6/m c c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(193, 'P 63/m c m', transformations) space_groups[193] = sg space_groups['P 63/m c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(194, 'P 63/m m c', transformations) space_groups[194] = sg space_groups['P 63/m m c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(195, 'P 2 3', transformations) space_groups[195] = sg space_groups['P 2 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(196, 'F 2 3', transformations) space_groups[196] = sg space_groups['F 2 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(197, 'I 2 3', transformations) space_groups[197] = sg space_groups['I 2 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(198, 'P 21 3', transformations) space_groups[198] = sg space_groups['P 21 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(199, 'I 21 3', transformations) space_groups[199] = sg space_groups['I 21 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(200, 'P m -3', transformations) space_groups[200] = sg space_groups['P m -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(201, 'P n -3 :2', transformations) space_groups[201] = sg space_groups['P n -3 :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(202, 'F m -3', transformations) space_groups[202] = sg space_groups['F m -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,3,3]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,3,3]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,3,3]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,0,3]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,0,3]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,0,3]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(203, 'F d -3 :2', transformations) space_groups[203] = sg space_groups['F d -3 :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(204, 'I m -3', transformations) space_groups[204] = sg space_groups['I m -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(205, 'P a -3', transformations) space_groups[205] = sg space_groups['P a -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(206, 'I a -3', transformations) space_groups[206] = sg space_groups['I a -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(207, 'P 4 3 2', transformations) space_groups[207] = sg space_groups['P 4 3 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(208, 'P 42 3 2', transformations) space_groups[208] = sg space_groups['P 42 3 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(209, 'F 4 3 2', transformations) space_groups[209] = sg space_groups['F 4 3 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(210, 'F 41 3 2', transformations) space_groups[210] = sg space_groups['F 41 3 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(211, 'I 4 3 2', transformations) space_groups[211] = sg space_groups['I 4 3 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(212, 'P 43 3 2', transformations) space_groups[212] = sg space_groups['P 43 3 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(213, 'P 41 3 2', transformations) space_groups[213] = sg space_groups['P 41 3 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,5,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,5,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,5,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(214, 'I 41 3 2', transformations) space_groups[214] = sg space_groups['I 41 3 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(215, 'P -4 3 m', transformations) space_groups[215] = sg space_groups['P -4 3 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(216, 'F -4 3 m', transformations) space_groups[216] = sg space_groups['F -4 3 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(217, 'I -4 3 m', transformations) space_groups[217] = sg space_groups['I -4 3 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(218, 'P -4 3 n', transformations) space_groups[218] = sg space_groups['P -4 3 n'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(219, 'F -4 3 c', transformations) space_groups[219] = sg space_groups['F -4 3 c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,5,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,5,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,5,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(220, 'I -4 3 d', transformations) space_groups[220] = sg space_groups['I -4 3 d'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(221, 'P m -3 m', transformations) space_groups[221] = sg space_groups['P m -3 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(222, 'P n -3 n :2', transformations) space_groups[222] = sg space_groups['P n -3 n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(223, 'P m -3 n', transformations) space_groups[223] = sg space_groups['P m -3 n'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,-1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,-1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num =
N.array([-1,0,-1])
numpy.array
import unittest import numpy import chainer from chainer import backend from chainer.backends import cuda from chainer import gradient_check from chainer import links from chainer import testing from chainer.testing import attr from chainer.testing import condition @testing.parameterize(*(testing.product({ 'shape': [(1, 4, 5, 5), (5, 4, 15), (3, 8)], 'groups': [1, 2, 4], 'dtype': [numpy.float32], }))) class GroupNormalizationTest(unittest.TestCase): def setUp(self): self.link = links.GroupNormalization(self.groups) self.link.cleargrads() self.x = numpy.random.uniform(-1, 1, self.shape).astype(self.dtype) self.gy = numpy.random.uniform(-1, 1, self.shape).astype(self.dtype) self.check_forward_options = {'atol': 1e-4, 'rtol': 1e-3} self.check_backward_options = {'atol': 1e-3, 'rtol': 1e-2} def check_forward(self, x_data): y = self.link(x_data) self.assertEqual(y.data.dtype, self.dtype) # Verify that forward isn't be affected by batch size if self.shape[0] > 1: xp = backend.get_array_module(x_data) y_one_each = chainer.functions.concat( [self.link(xp.expand_dims(one_x, axis=0)) for one_x in x_data], axis=0) testing.assert_allclose( y.data, y_one_each.data, **self.check_forward_options) @condition.retry(3) def test_forward_cpu(self): self.check_forward(self.x) @attr.gpu @condition.retry(3) def test_forward_gpu(self): self.link.to_gpu() self.check_forward(cuda.to_gpu(self.x)) @attr.cudnn def test_forward_gpu_without_cudnn(self): self.link.use_cudnn = False self.test_forward_gpu() @attr.multi_gpu(2) @condition.retry(3) def test_forward_multi_gpu(self): with cuda.get_device_from_id(1): self.link.to_gpu() x = cuda.to_gpu(self.x) with cuda.get_device_from_id(0): self.check_forward(x) def check_backward(self, x_data, y_grad): gradient_check.check_backward( self.link, x_data, y_grad, (self.link.gamma, self.link.beta), eps=1e-2, **self.check_backward_options) @condition.retry(3) def test_backward_cpu(self): self.link(
numpy.zeros(self.shape, dtype='f')
numpy.zeros
# -*- coding utf-8-*- """ Created on Tue Nov 23 10:15:35 2018 @author: galad-loth """ import numpy as npy import mxnet as mx class SSDHLoss(mx.operator.CustomOp): """ Loss layer for supervised semantics-preserving deep hashing. """ def __init__(self, w_bin, w_balance): self._w_bin = w_bin self._w_balance = w_balance def forward(self, is_train, req, in_data, out_data, aux): x=in_data[0].asnumpy() xs=x-0.5 y=npy.ones(x.shape) y[xs<0]=0 self.assign(out_data[0], req[0], mx.nd.array(y)) def backward(self, req, out_grad, in_data, out_data, in_grad, aux): x=in_data[0].asnumpy() grad1=-2*(x-0.5)/x.shape[0] mu=npy.mean(x,axis=1) grad2=2*(mu-0.5)/x.shape[0] grad=self._w_bin*grad1+self._w_balance*grad2[:,npy.newaxis] self.assign(in_grad[0], req[0], mx.nd.array(grad)) @mx.operator.register("ssdh_loss") class SSDHLossProp(mx.operator.CustomOpProp): def __init__(self, w_bin, w_balance): super(SSDHLossProp, self).__init__(need_top_grad=False) self._w_bin=float(w_bin) self._w_balance=float(w_balance) def list_arguments(self): return ['data'] def list_outputs(self): return ['output'] def infer_shape(self, in_shape): data_shape=in_shape[0] return [data_shape],[data_shape] def create_operator(self, ctx, shapes, dtypes): return SSDHLoss(self._w_bin, self._w_balance) class SiamDHLoss(mx.operator.CustomOp): """ Loss layer for deep hashing with siamese feature network. """ def __init__(self, margin, alpha): self._margin = margin self._alpha = alpha def forward(self, is_train, req, in_data, out_data, aux): x0=in_data[0].asnumpy() x1=in_data[1].asnumpy() l=in_data[0].asnumpy() d=self._alpha*(x0-x1)*(x0-x1)/2 y=npy.zeros(x0.shape) y[l>0]=d[l>0]#same class, y[l<=0]=npy.maximum(0, self.margin - d[l<=0]) self.assign(out_data[0], req[0], mx.nd.array(y)) def backward(self, req, out_grad, in_data, out_data, in_grad, aux): x0=in_data[0].asnumpy() x1=in_data[1].asnumpy() l=in_data[2].asnumpy() y=out_data[0].asnumpy() d=self._alpha*(x0-x1) dx0=
npy.zeros(d.shape)
numpy.zeros
# This code generates images of size 256 x 256 px that contains either an open or closed contour. # This contour consists of straight lines that form polygons. # author: <NAME> import numpy as np import math import csv import os from PIL import Image, ImageDraw from pathlib import Path # ------------------------------------------------------- # code to determine overlap # ------------------------------------------------------- # that's the distance of two non-overlaping points (=10 px) dist = 40 # intersection def ccw(A, B, C): return (C[1] - A[1]) * (B[0] - A[0]) > (B[1] - A[1]) * (C[0] - A[0]) def intersect(A, B, C, D): return ccw(A, C, D) != ccw(B, C, D) and ccw(A, B, C) != ccw(A, B, D) def test_overlap_point(lines, point, dist): # point=(0,0) # lines=[(1,1),(2,2),(3,3)] return point_to_multipleline_dist(lines, point) < dist def test_overlap_line(lines, new_line, dist): # new_line=[(10,10),(20,20),(30,30)] # lines=[(1,1),(2,2),(3,3)] # overlap for i in range(len(new_line)): point = new_line[i : i + 1][0] if test_overlap_point(lines, point, dist): return True for i in range(len(lines)): point = lines[i : i + 1][0] if test_overlap_point(new_line, point, dist): return True # intersection for i in range(len(new_line) - 1): line1 = new_line[i : i + 2] A = np.array(line1[0]) B = np.array(line1[1]) for i in range(len(lines) - 1): line2 = lines[i : i + 2] C = np.array(line2[0]) D =
np.array(line2[1])
numpy.array
#!/usr/bin/env python """ This has a mechanism to dispatch to different backends. You can change the order of preference of the backend by changing default_backends. TODO: this dispatch mechanism is very simple, maybe something a little more flexable would be useful down the line? """ from __future__ import print_function from itertools import count import numpy as np import viscid from viscid import field from viscid import logger from viscid import verror from viscid import seed from viscid.compat import izip, OrderedDict try: from viscid.calculator import cycalc has_cython = True except ImportError: has_cython = False try: from viscid.calculator import necalc has_numexpr = True except ImportError as e: has_numexpr = False __all__ = ['neg', 'scale', 'add', 'diff', 'mul', 'axpby', 'relative_diff', 'abs_diff', 'abs_val', 'abs_max', 'abs_min', 'magnitude', 'dot', 'cross', 'grad', 'convective_deriv', 'div', 'curl', 'normalize', 'project', 'project_vector', 'project_along_line', 'resample_lines', 'integrate_along_line', 'integrate_along_lines', 'jacobian_at_point', 'jacobian_at_ind', 'jacobian_eig_at_point', 'jacobian_eig_at_ind', 'div_at_point', 'curl_at_point', 'extend_boundaries', 'extend_boundaries_ndarr'] class Operation(object): default_backends = ["numexpr", "cython", "numpy"] _imps = None # implementations opname = None short_name = None def __init__(self, name, short_name, implementations=(), doc=""): self.opname = name self.short_name = short_name self._imps = OrderedDict() self.add_implementations(implementations) setattr(self, "__doc__", doc) @property def __name__(self): return self.opname def add_implementation(self, name, func): self._imps[name] = func def add_implementations(self, implementations): for name, func in implementations: self.add_implementation(name, func) def _get_imp(self, preferred, only=False): if not isinstance(preferred, (list, tuple)): if preferred is None: preferred = list(self._imps.keys()) else: preferred = [preferred] for name in preferred: if name in self._imps: return self._imps[name] msg = "{0} :: {1}".format(self.opname, preferred) if only: raise verror.BackendNotFound(msg) logger.info("No preferred backends available: " + msg) for name in self.default_backends: if name in self._imps: return self._imps[name] if len(self._imps) == 0: raise verror.BackendNotFound("No backends available") return list(self._imps.values())[0] def __call__(self, *args, **kwargs): preferred = kwargs.pop("preferred", None) only = kwargs.pop("only", False) func = self._get_imp(preferred, only) return func(*args, **kwargs) class UnaryOperation(Operation): def __call__(self, a, **kwargs): ret = super(UnaryOperation, self).__call__(a, **kwargs) ret.name = "{0} {1}".format(self.short_name, a.name) return ret class BinaryOperation(Operation): def __call__(self, a, b=None, **kwargs): ret = super(BinaryOperation, self).__call__(a, b, **kwargs) try: ret.name = "{0} {1} {2}".format(a.name, self.short_name, b.name) except AttributeError: try: ret.name = "{0} {1}".format(self.short_name, b.name) except AttributeError: try: ret.name = "{0} {1}".format(self.short_name, a.name) except AttributeError: ret.name = self.short_name return ret neg = UnaryOperation("neg", "-", doc="Callable, calculates -a") scale = BinaryOperation("scale", "*=", doc="Callable, scales a") add = BinaryOperation("add", "+", doc="Callable, calculates a + b") diff = BinaryOperation("diff", "-", doc="Callable, calculates a - b") mul = BinaryOperation("mul", "*", doc="Callable, calculates a * b") axpby = Operation("axpby", "+", doc="Callable, calculates a * x + b * y") relative_diff = BinaryOperation("relative diff", "%-", doc="Callable, calculates abs(a - b) / a") abs_diff = BinaryOperation("abs diff", "|-|", doc="Callable, calculates abs(a - b)") abs_val = UnaryOperation("abs val", "absval", doc="Callable, calculates abs(a)") abs_max = Operation("abs max", "absmax", doc="Callable, calculates max(abs(a))") abs_min = Operation("abs min", "absmin", doc="Callable, calculates min(abs(a))") magnitude = UnaryOperation("magnitude", "magnitude", doc="Callable, calculates L2 Norm of a vectors in a vector field") dot = BinaryOperation("dot", "dot", doc="Callable, calculates a dot b") cross = BinaryOperation("cross", "x", doc="Callable, calculates a cross b") project = BinaryOperation("project", "dot mag", doc="Callable, scalar projection of a onto b; a dot b / norm(b)") normalize = UnaryOperation("normalize", "normalize", doc="Callable, divide a vector field by its magnitude") grad = UnaryOperation("grad", "grad", doc="Callable, gradient of a scalar field") div = UnaryOperation("div", "div", doc="Callable, divergence of a vector field") curl = UnaryOperation("curl", "curl", doc="Callable, curl of a vector field") if has_numexpr: neg.add_implementation("numexpr", necalc.neg) scale.add_implementation("numexpr", necalc.scale) add.add_implementation("numexpr", necalc.add) diff.add_implementation("numexpr", necalc.diff) mul.add_implementation("numexpr", necalc.mul) axpby.add_implementation("numexpr", necalc.axpby) relative_diff.add_implementation("numexpr", necalc.relative_diff) abs_diff.add_implementation("numexpr", necalc.abs_diff) abs_val.add_implementation("numexpr", necalc.abs_val) abs_max.add_implementation("numexpr", necalc.abs_max) abs_min.add_implementation("numexpr", necalc.abs_min) magnitude.add_implementation("numexpr", necalc.magnitude) dot.add_implementation("numexpr", necalc.dot) cross.add_implementation("numexpr", necalc.cross) project.add_implementation("numexpr", necalc.project) normalize.add_implementation("numexpr", necalc.normalize) grad.add_implementation("numexpr", necalc.grad) div.add_implementation("numexpr", necalc.div) curl.add_implementation("numexpr", necalc.curl) # numpy versions neg.add_implementation("numpy", lambda a: -a) scale.add_implementation("numpy", lambda a, b: np.asarray(a, dtype=b.dtype) * b) add.add_implementation("numpy", lambda a, b: a + b) diff.add_implementation("numpy", lambda a, b: a - b) mul.add_implementation("numpy", lambda a, b: a * b) axpby.add_implementation("numpy", lambda a, x, b, y: a * x + b * y) relative_diff.add_implementation("numpy", lambda a, b: (a - b) / a) abs_diff.add_implementation("numpy", lambda a, b: np.abs(a - b)) abs_val.add_implementation("numpy", np.abs) abs_max.add_implementation("numpy", lambda a: np.max(np.abs(a))) abs_min.add_implementation("numpy", lambda a: np.min(np.abs(a))) def _magnitude_np(fld): return np.sqrt((np.sum(fld * fld, axis=fld.nr_comp))) magnitude.add_implementation("numpy", _magnitude_np) def _project_np(a, b): """ project a along b (a dot b / |b|) """ return (np.sum(a * b, axis=b.nr_comp) / np.sqrt(np.sum(b * b, axis=b.nr_comp))) project.add_implementation("numpy", _project_np) def _normalize_np(a): """ normalize a vector field """ shp0 = list(a.shape) shp0[a.nr_comp] = 1 return a / np.linalg.norm(a, axis=a.nr_comp).reshape(shp0) normalize.add_implementation("numpy", _normalize_np) def _dot_np(fld_a, fld_b): """dot product of two vector fields""" if fld_a.nr_comp != fld_b.nr_comp: raise ValueError("field must have same layout (flat or interlaced)") return np.sum(fld_a * fld_b, axis=fld_a.nr_comp) dot.add_implementation("numpy", _dot_np) def _cross_np(fld_a, fld_b): """cross product of two vector fields""" ax, ay, az = fld_a.component_views() bx, by, bz = fld_b.component_views() prodx = ay * bz - az * by prody = -ax * bz + az * bx prodz = ax * by - ay * bx return fld_a.wrap([prodx, prody, prodz]) cross.add_implementation("numpy", _cross_np) def _grad_np(fld, bnd=True): """2nd order centeral diff, 1st order @ boundaries if bnd""" if bnd: fld = viscid.extend_boundaries(fld, order=0, crd_order=0) if fld.iscentered("Cell"): crdx, crdy, crdz = fld.get_crds_cc(shaped=True) # divcenter = "Cell" # divcrds = coordinate.NonuniformCartesianCrds(fld.crds.get_clist(np.s_[1:-1])) # divcrds = fld.crds.slice_keep(np.s_[1:-1, 1:-1, 1:-1]) elif fld.iscentered("Node"): crdx, crdy, crdz = fld.get_crds_nc(shaped=True) # divcenter = "Node" # divcrds = coordinate.NonuniformCartesianCrds(fld.crds.get_clist(np.s_[1:-1])) # divcrds = fld.crds.slice_keep(np.s_[1:-1, 1:-1, 1:-1]) else: raise NotImplementedError("Can only do cell and node centered gradients") v = fld.data g = viscid.zeros(fld['x=1:-1, y=1:-1, z=1:-1'].crds, nr_comps=3) xp, xm = crdx[2:, :, :], crdx[:-2, : , : ] # pylint: disable=bad-whitespace yp, ym = crdy[ :, 2:, :], crdy[: , :-2, : ] # pylint: disable=bad-whitespace zp, zm = crdz[ :, :, 2:], crdz[: , : , :-2] # pylint: disable=bad-whitespace vxp, vxm = v[2: , 1:-1, 1:-1], v[ :-2, 1:-1, 1:-1] # pylint: disable=bad-whitespace vyp, vym = v[1:-1, 2: , 1:-1], v[1:-1, :-2, 1:-1] # pylint: disable=bad-whitespace vzp, vzm = v[1:-1, 1:-1, 2: ], v[1:-1, 1:-1, :-2] # pylint: disable=bad-whitespace g['x'].data[...] = (vxp - vxm) / (xp - xm) g['y'].data[...] = (vyp - vym) / (yp - ym) g['z'].data[...] = (vzp - vzm) / (zp - zm) return g grad.add_implementation("numpy", _grad_np) def _div_np(fld, bnd=True): """2nd order centeral diff, 1st order @ boundaries if bnd""" if fld.iscentered("Face"): # dispatch fc div immediately since that does its own pre-processing return viscid.div_fc(fld, bnd=bnd) if bnd: fld = viscid.extend_boundaries(fld, order=0, crd_order=0) vx, vy, vz = fld.component_views() if fld.iscentered("Cell"): crdx, crdy, crdz = fld.get_crds_cc(shaped=True) divcenter = "Cell" # divcrds = coordinate.NonuniformCartesianCrds(fld.crds.get_clist(np.s_[1:-1])) divcrds = fld.crds.slice_keep(np.s_[1:-1, 1:-1, 1:-1]) elif fld.iscentered("Node"): crdx, crdy, crdz = fld.get_crds_nc(shaped=True) divcenter = "Node" # divcrds = coordinate.NonuniformCartesianCrds(fld.crds.get_clist(np.s_[1:-1])) divcrds = fld.crds.slice_keep(np.s_[1:-1, 1:-1, 1:-1]) else: raise NotImplementedError("Can only do cell and node centered divs") xp, xm = crdx[2:, :, :], crdx[:-2, : , : ] # pylint: disable=bad-whitespace yp, ym = crdy[ :, 2:, :], crdy[: , :-2, : ] # pylint: disable=bad-whitespace zp, zm = crdz[ :, :, 2:], crdz[: , : , :-2] # pylint: disable=bad-whitespace vxp, vxm = vx[2: , 1:-1, 1:-1], vx[ :-2, 1:-1, 1:-1] # pylint: disable=bad-whitespace vyp, vym = vy[1:-1, 2: , 1:-1], vy[1:-1, :-2, 1:-1] # pylint: disable=bad-whitespace vzp, vzm = vz[1:-1, 1:-1, 2: ], vz[1:-1, 1:-1, :-2] # pylint: disable=bad-whitespace div_arr = ((vxp - vxm) / (xp - xm) + (vyp - vym) / (yp - ym) + (vzp - vzm) / (zp - zm)) return field.wrap_field(div_arr, divcrds, name="div " + fld.name, center=divcenter, time=fld.time, parents=[fld]) div.add_implementation("numpy", _div_np) def _curl_np(fld, bnd=True): """2nd order centeral diff, 1st order @ boundaries if bnd""" if bnd: fld = viscid.extend_boundaries(fld, order=0, crd_order=0) vx, vy, vz = fld.component_views() if fld.iscentered("Cell"): crdx, crdy, crdz = fld.get_crds_cc(shaped=True) curlcenter = "cell" # curlcrds = coordinate.NonuniformCartesianCrds(fld.crds.get_clist(np.s_[1:-1])) curlcrds = fld.crds.slice_keep(np.s_[1:-1, 1:-1, 1:-1]) elif fld.iscentered("Node"): crdx, crdy, crdz = fld.get_crds_nc(shaped=True) curlcenter = "node" # curlcrds = coordinate.NonuniformCartesianCrds(fld.crds.get_clist(np.s_[1:-1])) curlcrds = fld.crds.slice_keep(np.s_[1:-1, 1:-1, 1:-1]) else: raise NotImplementedError("Can only do cell and node centered divs") xp, xm = crdx[2:, :, :], crdx[:-2, : , : ] # pylint: disable=bad-whitespace yp, ym = crdy[ :, 2:, :], crdy[: , :-2, : ] # pylint: disable=bad-whitespace zp, zm = crdz[ :, :, 2:], crdz[: , : , :-2] # pylint: disable=bad-whitespace vxpy, vxmy = vx[1:-1, 2: , 1:-1], vx[1:-1, :-2, 1:-1] # pylint: disable=bad-whitespace vxpz, vxmz = vx[1:-1, 1:-1, 2: ], vx[1:-1, 1:-1, :-2] # pylint: disable=bad-whitespace vypx, vymx = vy[2: , 1:-1, 1:-1], vy[ :-2, 1:-1, 1:-1] # pylint: disable=bad-whitespace vypz, vymz = vy[1:-1, 1:-1, 2: ], vy[1:-1, 1:-1, :-2] # pylint: disable=bad-whitespace vzpx, vzmx = vz[2: , 1:-1, 1:-1], vz[ :-2, 1:-1, 1:-1] # pylint: disable=bad-whitespace vzpy, vzmy = vz[1:-1, 2: , 1:-1], vz[1:-1, :-2, 1:-1] # pylint: disable=bad-whitespace curl_x = (vzpy - vzmy) / (yp - ym) - (vypz - vymz) / (zp - zm) curl_y = -(vzpx - vzmx) / (xp - xm) + (vxpz - vxmz) / (zp - zm) curl_z = (vypx - vymx) / (xp - xm) - (vxpy - vxmy) / (yp - ym) return field.wrap_field([curl_x, curl_y, curl_z], curlcrds, name="curl " + fld.name, fldtype="Vector", center=curlcenter, time=fld.time, parents=[fld]) curl.add_implementation("numpy", _curl_np) def convective_deriv(a, b=None, bnd=True): r"""Compute (a \dot \nabla) b for vector fields a and b""" # [(B \dot \nabla) B]_j = B_i \partial_i B_j # FIXME: this is a lot of temporary arrays if bnd: if b is None: b = viscid.extend_boundaries(a, order=0, crd_order=0) else: b = viscid.extend_boundaries(b, order=0, crd_order=0) else: if b is None: b = a a = a['x=1:-1, y=1:-1, z=1:-1'] if b.nr_comps > 1: diBj = [[None, None, None], [None, None, None], [None, None, None]] for j, jcmp in enumerate('xyz'): g = grad(b[jcmp], bnd=False) for i, icmp in enumerate('xyz'): diBj[i][j] = g[icmp] dest = viscid.zeros(a.crds, nr_comps=3) for i, icmp in enumerate('xyz'): for j, jcmp in enumerate('xyz'): dest[jcmp][...] += a[icmp] * diBj[i][j] else: dest = dot(a, grad(b, bnd=False)) return dest # native versions NOTE: magnitude_native is really only for benchmarking def _magnitude_native(fld): vx, vy, vz = fld.component_views() mag = np.empty_like(vx) for i in range(mag.shape[0]): for j in range(mag.shape[1]): for k in range(mag.shape[2]): mag[i, j, k] = np.sqrt(vx[i, j, k]**2 + vy[i, j, k]**2 + vz[i, j, k]**2) return vx.wrap(mag, context={"name": "{0} magnitude".format(fld.name)}) magnitude.add_implementation("native", _magnitude_native) def project_vector(a, b): """Calculates the vector (a dot b_hat) * b_hat""" bnorm = normalize(b) # print(">>", type(bnorm), bnorm.shape, bnorm.nr_comps, # "MIN", np.min(np.linalg.norm(bnorm, axis=b.nr_comp)), # "MAX", np.max(np.linalg.norm(bnorm, axis=b.nr_comp))) return project(a, bnorm) * bnorm def resample_lines(lines, factor=1, kind="linear"): """Resample a bunch of lines Args: lines (sequence): a list of 3xN ndarrays that are lines factor (float): how to resample. 2 will give a point at the midpoint of all points, 3 will give two points, etc. 0.5 will leave half the number of points, etc. This should be > 0.0. kind (str): How to interpolate; must be a value recognized by :py:func:`scipy.interpolate.interp1d` Raises: ValueError: List of resampled 3xN ndarrays """ # FIXME: this is wicked slow if factor <= 0: raise ValueError("factor should be > 0") elif factor == 1: return lines for i, line in enumerate(lines): nr_sdims, nold = line.shape nnew = np.ceil(factor * (nold - 1)) + 1 newline = np.empty((nr_sdims, nnew), dtype=line.dtype) sold = np.linspace(0, 1, nold) snew = np.linspace(0, 1, nnew) try: # raise ImportError from scipy.interpolate import interp1d for j in range(nr_sdims): newline[j, :] = interp1d(sold, line[j, :], kind=kind)(snew) except ImportError: if kind != 'linear': viscid.logger.error("Scipy is required to do anything " "other than linear interpolation") raise for j in range(nr_sdims): newline[j, :] = np.interp(snew, sold, line[j, :]) lines[i] = newline return lines def project_along_line(line, fld, interp_kind='trilin'): """Project a Vector Field Parallel to a streamline Args: line (ndarray): 3xN of points along the fld (VectorField): Field to interpolate and project onto the line interp_kind (str): which interpolation to use, const or trilin """ fld_on_verts = viscid.interp(fld, line, kind=interp_kind) # FIXME: here in lies a bug, which axis am I actually summing over? # maybe that's not the bug, but there must be something wrong # here as indicated by kris_scripts/work/iono_xi_mismatch/analytic_pot.py dsvec = line[:, 2:] - line[:, :-2] dsvec = np.concatenate([dsvec[:, 0:1], dsvec, dsvec[:, -2:-1]], axis=1) dsvec = dsvec / np.linalg.norm(dsvec, axis=0) return np.sum(fld_on_verts * dsvec.T, axis=1) def integrate_along_line(line, fld, reduction="dot", mask_func=None, interp_kind='trilin'): """Integrate the value of fld along a line Args: line (ndarray): 3xN ndarray fld (Field): Field to interpolate / integrate reduction (str): If fld is a vector field, what quantity to integrate. Can be "dot" to dot the vectors with ds along the line, or "mag" to integrate the magnitude. interp_kind (str): which interpolation to use, const or trilin Returns: a scalar with the same dtype as fld """ return integrate_along_lines([line], fld, reduction=reduction, mask_func=mask_func, interp_kind=interp_kind)[0] def integrate_along_lines(lines, fld, reduction="dot", mask_func=None, interp_kind='trilin'): """Integrate the value of fld along a list of lines Args: lines (list): list of 3xN ndarrays, N needs not be the same for all lines fld (Field): Field to interpolate / integrate reduction (str): If fld is a vector field, what quantity to integrate. Can be "dot" to dot the vectors with ds along the line, or "mag" to integrate the magnitude. interp_kind (str): which interpolation to use, const or trilin Returns: ndarray with shape (len(lines), ) """ arr = np.zeros((len(lines),), dtype=fld.dtype) cum_n = np.cumsum([0] + [line.shape[1] for line in lines]) all_verts = np.concatenate(lines, axis=1) fld_on_verts = viscid.interp(fld, all_verts, kind=interp_kind).data for i, start, stop in izip(count(), cum_n[:-1], cum_n[1:]): ds = np.linalg.norm(lines[i][:, 1:] - lines[i][:, :-1], axis=0) if len(fld_on_verts.shape) > 1: reduction = reduction.strip().lower() if reduction == "dot": dsvec = lines[i][:, 1:] - lines[i][:, :-1] dsvec = dsvec / np.linalg.norm(dsvec, axis=0) values = 0.5 * (fld_on_verts[start:stop - 1, :] + fld_on_verts[start + 1:stop, :]) values = values * dsvec.T if mask_func is not None: values = np.ma.masked_where(mask_func(values), values) values = np.sum(values, axis=1) elif reduction in ["mag", "magnitude", "norm"]: mag = np.linalg.norm(fld_on_verts[start:stop], axis=1) values = 0.5 * (mag[start:stop - 1] + mag[start + 1:stop]) else: raise ValueError("Unknown reduction: {0}".format(reduction)) else: values = 0.5 * (fld_on_verts[start:stop - 1] + fld_on_verts[start + 1:stop]) arr[i] = np.sum(values * ds) return arr def local_vector_points(B, x, y, z, dx=None, dy=None, dz=None): """Get B at 6 points surrounding X X = [x, y, z] with spacing [+/-dx, +/-dy, +/-dz] Args: B (VectorField): B field x (float, ndarray, list): x (single value) y (float, ndarray, list): y (single value) z (float, ndarray, list): z (single value) dx (float, optional): dx, one grid cell if None dy (float, optional): dy, one grid cell if None dz (float, optional): dz, one grid cell if None Returns: (bs, pts, dcrd) * bs (ndarary): shape (6, 3) where 0-3 -> Bx,By,Bz and 0-6 -> X-dx, X+dx, X-dy, X+dy, X-dz, X+dz * pts (ndarray): shape (6, 3); the location of the points of the bs, but this time, 0-3 -> x,y,z * dcrd (list): [dx, dy, dz] """ assert has_cython # if a problem, you need to build Viscid assert B.iscentered("Cell") x, y, z = [np.array(c).reshape(1, 1) for c in [x, y, z]] crds = B.get_crds("xyz") inds = [0] * len(crds) dcrd = [0] * len(crds) # This makes points in xyz order pts = np.tile([x, y, z], 6).reshape(3, -1).T for i, crd, loc, d in zip(count(), crds, [x, y, z], [dx, dy, dz]): inds[i] = cycalc.closest_ind(crd, loc) if d is None: dcrd[i] = crd[inds[i] + 1] - crd[inds[i]] else: dcrd[i] = d pts[2 * i + 1, i] += dcrd[i] pts[2 * i + 0, i] -= dcrd[i] bs = cycalc.interp_trilin(B, seed.Point(pts)) # viscid.interact(banner="in local_vector_points") return bs, pts, dcrd def jacobian_at_point(B, x, y, z, dx=None, dy=None, dz=None): """Get the Jacobian at a point If dx|dy|dz == None, then their set to the grid spacing at the point of interest Returns: The jacobian as a 3x3 ndarray. The result is in xyz order, in other words:: [ [d_x Bx, d_y Bx, d_z Bx], [d_x By, d_y By, d_z By], [d_x Bz, d_y Bz, d_z Bz] ] """ bs, _, dcrd = local_vector_points(B, x, y, z, dx, dy, dz) gradb = np.empty((3, 3), dtype=B.dtype) # bs is in xyz spatial order, but components are in xyz order # dcrd is in xyz order # gradb has xyz order for everything for i in range(3): gradb[i, 0] = (bs[1, i] - bs[0, i]) / (2.0 * dcrd[0]) # d_x Bi gradb[i, 1] = (bs[3, i] - bs[2, i]) / (2.0 * dcrd[1]) # d_y Bi gradb[i, 2] = (bs[5, i] - bs[4, i]) / (2.0 * dcrd[2]) # d_z Bi return gradb def jacobian_at_ind(B, ix, iy, iz): """Get the Jacobian at index Returns: The jacobian as a 3x3 ndarray. The result is in xyz order, in other words:: [ [d_x Bx, d_y Bx, d_z Bx], [d_x By, d_y By, d_z By], [d_x Bz, d_y Bz, d_z Bz] ] """ bx, by, bz = B.component_views() x, y, z = B.get_crds("xyz") gradb = np.empty((3, 3), dtype=B.dtype) for i, bi in enumerate([bx, by, bz]): # d_x Bi, d_y Bi, d_z Bi gradb[i, 0] = (bi[ix + 1, iy, iz] - bi[ix - 1, iy, iz]) / (x[ix + 1] - x[ix - 1]) gradb[i, 1] = (bi[ix, iy + 1, iz] - bi[ix, iy - 1, iz]) / (y[iy + 1] - y[iy - 1]) gradb[i, 2] = (bi[ix, iy, iz + 1] - bi[ix, iy, iz - 1]) / (z[iz + 1] - z[iz - 1]) return gradb def jacobian_eig_at_point(B, x, y, z, dx=None, dy=None, dz=None): """Get the eigen vals/vecs of the jacobian Returns: evals, evecs (3x3 ndarray) The evec[:, i] corresponds to evals[i]. Eigen vectors are returned in xyz order, aka evec[:, 0] is [x, y, z] for the 0th eigen vector """ gradb = jacobian_at_point(B, x, y, z, dx, dy, dz) evals, evecs = np.linalg.eig(gradb) return evals, evecs def jacobian_eig_at_ind(B, ix, iy, iz): """Get the eigen vals/vecs of the jacobian Returns: evals, evecs (3x3 ndarray) The evec[:, i] corresponds to evals[i]. Eigen vectors are returned in xyz order, aka evec[:, 0] is [x, y, z] for the 0th eigen vector """ gradb = jacobian_at_ind(B, ix, iy, iz) evals, evecs = np.linalg.eig(gradb) return evals, evecs def div_at_point(A, x, y, z, dx=None, dy=None, dz=None): """Returns divergence at a point""" As, _, dcrd = local_vector_points(A, x, y, z, dx, dy, dz) d = 0.0 for i in range(3): d += (As[2 * i + 1, i] - As[2 * i + 0, i]) / (2.0 * dcrd[i]) return d def curl_at_point(A, x, y, z, dx=None, dy=None, dz=None): """Returns curl at point as ndarray with shape (3,) xyz""" As, _, dcrd = local_vector_points(A, x, y, z, dx, dy, dz) c =
np.zeros(3, dtype=A.dtype)
numpy.zeros
from __future__ import print_function, division import matplotlib #matplotlib.use('Agg') import numpy as np import scipy as sp from operator import truediv import math, time import matplotlib.pyplot as plt import matplotlib.cm as cm from itertools import groupby import sisl as si from numbers import Integral # I don't know why, but the lines below were # fucking up my routine "makeTB_FrameOutside", on the "contruct" command #try: # from itertools import izip as zip #except: # pass def dagger(M): return np.conjugate(np.transpose(M)) def displaySparse(m, filename, dpi=300): if not isinstance(m, sp.sparse.coo_matrix): m = sp.sparse.coo_matrix(m) fig = plt.figure() ax = fig.add_subplot(111, axisbg='black') ax.plot(m.col, m.row, 's', color='white', ms=10) ax.set_xlim(0, m.shape[1]) ax.set_ylim(0, m.shape[0]) ax.set_aspect('equal') for spine in ax.spines.values(): spine.set_visible(False) ax.invert_yaxis() ax.set_aspect('equal') ax.set_xticks([]) ax.set_yticks([]) plt.savefig(filename, facecolor='black', edgecolor='black', dpi=dpi) return ax def get_potential(TSHS, iio, atoms): """ iio: index (0-based) of orbital in basis set (i.e., pz in SZP: iio = 2) """ orbs = TSHS.a2o(atoms)+iio on = TSHS.Hk(dtype=np.float64, format='array')[orbs, orbs] return on def check_Dirac(ts, mp, displacement=[0,0,0]): mp = si.MonkhorstPack(ts, mp, displacement=displacement) print('Check that Dirac is in here: ') print(mp.k) print('Check that this is in *.KP file : {}'.format(mp.tocartesian([0., 1./3, 0]) * si.unit.siesta.unit_convert('Bohr', 'Ang'))) i_dirac = (np.logical_and(mp.k[:,1] == 1./3, mp.k[:,0] == 0.)).nonzero()[0] if len(i_dirac) != 1: print('Dirac point is not in the grid') exit(1) else: print('Dirac point is at kindex: {}'.format(i_dirac[0])) def get_Dirac(hs, mp, displacement=[0,0,0]): #check_Dirac(hs.geom, mp, displacement) ens_dirac = hs.eigh(k=[0., 1./3, 0]) i_dirac = hs.na * 2 - 1 return np.average(ens_dirac[i_dirac:i_dirac+2]) def plot_PotDiff(TSHS, TSHS_0, ia, axis, iio, o_dev, o_inner): # include option for frame! on, yy, atoms = get_potential(TSHS, ia, axis, iio) on0 = get_potential(TSHS_0, ia, axis, iio)[0] on0 = np.array([np.mean(on0)]*len(on)) # Check print('y (Ang)\t\tPot (eV)\tPot0 (eV)\tPot-Pot0 (eV)') a_dev = TSHS.o2a(o_dev, unique=True) a_inner = TSHS.o2a(o_inner, unique=True) for iia, y, o, o0 in zip(atoms, yy, on, on0): if iia in a_inner: print('{:7.4f}\t\t{:7.4f}\t\t{:7.4f}\t\t{:7.4f}\t\t(inner)'.format(y,o,o0,o-o0)) else: print('{:7.4f}\t\t{:7.4f}\t\t{:7.4f}\t\t{:7.4f}'.format(y,o,o0,o-o0)) # Subtract pristine potential PotDiff = on-on0 # Write to file with open('PotDiff.dat', 'w') as pf: for yc, pd in zip(yy, PotDiff): pf.write('{}\t\t{}\n'.format(yc, pd)) # Plot figure() plot(yy, PotDiff, 'b') md, Md = np.amin(TSHS.xyz[a_dev, axis]), np.amax(TSHS.xyz[a_dev, axis]) axvline(md, color='k', linestyle='dashed', linewidth=2) axvline(Md, color='k', linestyle='dashed', linewidth=2) tmp_dev = TSHS.geom.sub(a_dev); tmp_inner = tmp_dev.sub(a_inner) mi, Mi = np.amin(tmp_inner.xyz[a_inner, axis]), np.amax(tmp_inner.xyz[a_inner, axis]) axvspan(mi, Mi, alpha=0.3, facecolor='blue', edgecolor='none') ylabel(r'$H_{p_z}-H^0_{p_z}\, (e{\rm V})$', fontsize=20) xlabel(r'$y\, (\AA)$', fontsize=20) xlim(0, TSHS.cell[axis, axis]) #xlim(TSHS.center(what='cell')[1], TSHS.cell[1,1]) legend(loc=0); savefig('PotDiff.pdf', bbox_inches='tight') def get_potential_profile(TSHS, ia, axis, iio): """ ia: atom crossed by the line axis: direction of the line iio: index (0-based) of orbital in basis set (i.e., pz in SZP: iio = 2) """ # Find atoms in line passing by center of xyz0, xyz = TSHS.xyz[ia, axis%1], TSHS.xyz[:, axis%1] atoms = np.where(np.logical_and(xyz0-1.43 < xyz, xyz < xyz0+1.43))[0] v = TSHS.geom.copy(); v.atom[atoms] = si.Atom(8, R=[1.43]); v.write('checkPot.xyz') orbs = TSHS.a2o(atoms)+iio on = TSHS.Hk(dtype=np.float64, format='array')[orbs, orbs] ylist = TSHS.xyz[atoms, axis] idxs = np.argsort(ylist) on, ylist = on[idxs], ylist[idxs] return on, ylist, atoms def xyz2polar(tbt, origin=0): na = tbt.na # radii from origin if isinstance(origin, Integral): origin = tbt.xyz[origin] _, r = tbt.geom.close_sc(origin, R=np.inf, ret_rij=True) # angles from origin transl = tbt.geom.translate(-origin) y = transl.xyz[:,1] i_ypos = np.where(y >= 0)[0] i_yneg = np.setdiff1d(np.arange(na), i_ypos) t = np.zeros(na) t[i_ypos] = transl.angle(i_ypos, dir=(1., 0, 0), rad=True) t[i_yneg] = transl.angle(i_yneg, dir=(-1., 0, 0), rad=True) +np.pi return r, t def radial_T_from_bc(tbt, elec, E=None, kavg=True, origin=0, thetamin=0., thetamax=2*np.pi, ntheta=360, Rmin=5., Rmax=999999999, dr=40., input=None, save='radial_T_from_bc.txt', saveinput='rt.txt'): if E: Eidx = tbt.Eindex(E) en = tbt.E[Eidx] else: en = tbt.E[0] print('Using E = {} eV'.format(en)) na = tbt.na if isinstance(origin, Integral): origin = tbt.xyz[origin] # (x, y) ----> (r, t) if input: r, t = np.loadtxt(input, delimiter='\t', usecols=(1, 2), unpack=True, skiprows=1) else: r, t = xyz2polar(tbt, origin=origin) f = open(saveinput, 'w') f.write('ia\tr (Angstrom)\tangle (radians; center {})\n'.format(origin)) for ia, rr, tt in zip(np.arange(na), r, t): f.write('{}\t{}\t{}\n'.format(ia, rr, tt)) f.close() print('(x,y) ---> (r,t): DONE') # theta bins thetas = np.linspace(thetamin, thetamax, ntheta, endpoint=False) dtheta = thetas[1]-thetas[0] print(len(thetas), dtheta, thetas) # Digitize t into thetas inds = np.digitize(t, thetas) -1 # First bin is associated to 0.0 rad print('Digitize theta: DONE') # radii[i] is the radius of the interface between 2 crowns centered at the position of the tip newRmax = np.amin(np.absolute(np.array([origin[0], origin[1], (origin-tbt.cell[0]-tbt.cell[1])[0], (origin-tbt.cell[0]-tbt.cell[1])[1]]))) radii = np.arange(np.amax([Rmin, dr]), np.amin([Rmax, newRmax])+2*dr, dr) nradii = len(radii) print(nradii, dr, radii) # indices of atom within the various shells # atoms in list ishell[i] belong to [radii[i], radii[i+1]] ishell = tbt.geom.close_sc(origin, R=radii, idx=tbt.a_dev) print('Close: DONE') # Read bond-current bc = tbt.bond_current(0, en, kavg=kavg, only='all', uc=True) print('bc: DONE') Tavg = np.zeros(ntheta*nradii) thetas_toplot = Tavg.copy() radii_toplot = Tavg.copy() j=0 for id in np.arange(ntheta): # Loop over unique angles print(' Doing theta #{} of {} ({} rad)'.format(id+1, ntheta, thetas[id])) idx_intheta = np.where(inds == id)[0] # find indices of atoms whose t is in sector theta for id_r in np.arange(1,nradii-1): # Loop over unique radii print(' Doing radius #{} of {} ({} Ang)'.format(id_r, nradii, radii[id_r])) idx_1_indr = ishell[id_r] # Indices of atoms within internal shell mask = np.in1d(idx_1_indr, idx_intheta) idx_1 = idx_1_indr[mask] # Indices of atoms in internal shell AND sector theta idx_2 = ishell[id_r+1] # # Indices of atoms within external shell Tavg[j] = bc[idx_1.reshape(-1, 1), idx_2.reshape(1, -1)].sum() thetas_toplot[j] = thetas[id] radii_toplot[j] = radii[id_r] #print(' ({} Ang, {} rad) --> {}'.format(radii_toplot[j], thetas_toplot[j], Tavg[j])) j+=1 # Write f = open(save, 'w') f.write('center {}\n'.format(origin)) f.write('radius (Ang), \t theta (rad), \tT from radial bond current\n') for rr, theta, ttt in zip(radii_toplot, thetas_toplot, Tavg): f.write('{}\t{}\t{}\n'.format(rr, theta, ttt)) f.close() return radii_toplot, thetas_toplot, Tavg def atom_current_radial(tbt, elec, E, kavg=True, activity=True, origin=0, thetamin=0., thetamax=2*np.pi, ntheta=360, Rmin=5., Rmax=999999999, dr=40., input=None, save='atom_current_radial.txt', saveinput='ac_input.txt'): if E: Eidx = tbt.Eindex(E) en = tbt.E[Eidx] else: en = tbt.E[0] print('Using E = {} eV'.format(en)) na = tbt.na if isinstance(origin, Integral): origin = tbt.xyz[origin] # (x, y) ----> (r, t) if input: r, t, ac = np.loadtxt(input, delimiter='\t', usecols=(1, 2, 3), unpack=True, skiprows=1) else: r, t = xyz2polar(tbt, origin=origin) print('start extraction of atom_current...') ac = tbt.atom_current(elec, E, kavg, activity) print('...end extraction of atom_current') f = open(saveinput, 'w') f.write('ia\tr (Ang)\tangle (rad; center {})\tatom current\n'.format(origin)) for ia, rr, tt, a in zip(np.arange(na), r, t, ac): f.write('{}\t{}\t{}\t{}\n'.format(ia, rr, tt, a)) f.close() print('(x,y) ---> (r,t): DONE') # theta bins thetas = np.linspace(thetamin, thetamax, ntheta, endpoint=False) dtheta = thetas[1]-thetas[0] print('Thetas entries:') print(len(thetas), dtheta, thetas) # Digitize t into thetas inds = np.digitize(t, thetas) -1 # First bin is associated to 0.0 rad print('Digitize theta: DONE') # radii[i] is the radius of the interface between 2 crowns centered at the position of the tip newRmax = np.amin(np.absolute(np.array([origin[0], origin[1], (origin-tbt.cell[0]-tbt.cell[1])[0], (origin-tbt.cell[0]-tbt.cell[1])[1]]))) radii = np.arange(np.amax([Rmin, dr]), np.amin([Rmax, newRmax])+dr, dr) nradii = len(radii) print('Radii entries:') print(nradii, dr, radii) # indices of atom within the various shells # atoms in list ishell[i] belong to [radii[i], radii[i+1]] #ishell = tbt.geom.close_sc(origin, R=radii, idx=tbt.a_dev) #print('Close: DONE') current_r = np.zeros((nradii, ntheta)) for ir, rr in enumerate(radii): # Loop over unique radii current_t = np.zeros(ntheta) counts_t = current_t.copy() inR = np.where(r < rr)[0] for id, a in zip(inds[inR], ac[inR]): current_t[id] += a counts_t[id] += 1 current_r[ir, :] = np.divide(current_t, counts_t) # Write np.savetxt(save, np.transpose(np.vstack([thetas, current_r])), delimiter='\t', newline='\n', comments='', header=', '.join(str(e) for e in radii)) return radii, thetas, current_r def plot_LDOS(geom, LDOS, figname='figure.png', vmin=None, vmax=None): import matplotlib.collections as collections from matplotlib.colors import LogNorm from mpl_toolkits.axes_grid1 import make_axes_locatable x, y = geom.xyz[:,0], geom.xyz[:,1] fig, ax = plt.subplots() ax.set_aspect('equal') vmin, vmax = vmin, vmax if vmin is None: vmin = np.min(LDOS) if vmax is None: vmax = np.max(LDOS) colors = LDOS area = 15 image = ax.scatter(x, y, c=colors, s=area, marker='o', edgecolors='None', cmap='viridis') image.set_clim(vmin, vmax) image.set_array(LDOS) ax.autoscale() ax.margins(0.1) plt.xlabel('$x (\AA)$') plt.ylabel('$y (\AA)$') plt.gcf() divider = make_axes_locatable(ax) cax = divider.append_axes("right", size="5%", pad=0.05) axcb = plt.colorbar(image, cax=cax, format='%1.2f', ticks=[vmin, vmax]) plt.savefig(figname, bbox_inches='tight', transparent=True, dpi=300) print('Successfully plotted to "{}"'.format(figname)) def CAP(geometry, side, dz_CAP=30, write_xyz=True, zaxis=2): # Determine orientation if zaxis == 2: xaxis, yaxis = 0, 1 elif zaxis == 0: xaxis, yaxis = 1, 2 elif zaxis == 1: xaxis, yaxis = 0, 2 # Natural units (see "http://superstringtheory.com/unitsa.html") hbar = 1 m = 0.511e6 # eV c = 2.62 print('\nSetting up CAP regions: {}'.format(side)) print('Width of absorbing walls = {} Angstrom'.format(dz_CAP)) Wmax = 100 dH_CAP = si.Hamiltonian(geometry, dtype='complex128') CAP_list = [] ### EDGES if 'right' in side: print('Setting at right') z, y = geometry.xyz[:, xaxis], geometry.xyz[:, yaxis] z2 = np.max(geometry.xyz[:, xaxis]) + 1. z1 = z2 - dz_CAP idx = np.where(np.logical_and(z1 <= z, z < z2))[0] fz = (4/(c**2)) * ((dz_CAP/(z2-2*z1+z[idx]))**2 + (dz_CAP/(z2-z[idx]))**2 - 2 ) Wz = ((hbar**2)/(2*m)) * (2*np.pi/(dz_CAP/2000))**2 * fz orbs = dH_CAP.geom.a2o(idx) # if you have just 1 orb per atom, then orb = ia for orb,wz in zip(orbs, Wz): dH_CAP[orb, orb] = complex(0, -wz) CAP_list.append(idx) #print(list2range_TBTblock(idx)) if 'left' in side: print('Setting at left') z, y = geometry.xyz[:, xaxis], geometry.xyz[:, yaxis] z2 = np.min(geometry.xyz[:, xaxis]) - 1. z1 = z2 + dz_CAP idx = np.where(np.logical_and(z2 < z, z <= z1))[0] fz = (4/(c**2)) * ((dz_CAP/(z2-2*z1+z[idx]))**2 + (dz_CAP/(z2-z[idx]))**2 - 2 ) Wz = ((hbar**2)/(2*m)) * (2*np.pi/(dz_CAP/2000))**2 * fz orbs = dH_CAP.geom.a2o(idx) # if you have just 1 orb per atom, then orb = ia for orb,wz in zip(orbs, Wz): dH_CAP[orb, orb] = complex(0, -wz) CAP_list.append(idx) #print(list2range_TBTblock(idx)) if 'top' in side: print('Setting at top') z, y = geometry.xyz[:, xaxis], geometry.xyz[:, yaxis] y2 = np.max(geometry.xyz[:, yaxis]) + 1. y1 = y2 - dz_CAP idx = np.where(np.logical_and(y1 <= y, y < y2))[0] fz = (4/(c**2)) * ( (dz_CAP/(y2-2*y1+y[idx]))**2 + (dz_CAP/(y2-y[idx]))**2 - 2 ) Wz = ((hbar**2)/(2*m)) * (2*np.pi/(dz_CAP/2000))**2 * fz orbs = dH_CAP.geom.a2o(idx) # if you have just 1 orb per atom, then orb = ia for orb,wz in zip(orbs, Wz): dH_CAP[orb, orb] = complex(0, -wz) CAP_list.append(idx) #print(list2range_TBTblock(idx)) if 'bottom' in side: print('Setting at bottom') z, y = geometry.xyz[:, xaxis], geometry.xyz[:, yaxis] y2 = np.min(geometry.xyz[:, yaxis]) - 1. y1 = y2 + dz_CAP idx = np.where(np.logical_and(y2 < y, y <= y1))[0] fz = (4/(c**2)) * ( (dz_CAP/(y2-2*y1+y[idx]))**2 + (dz_CAP/(y2-y[idx]))**2 - 2 ) Wz = ((hbar**2)/(2*m)) * (2*np.pi/(dz_CAP/2000))**2 * fz orbs = dH_CAP.geom.a2o(idx) # if you have just 1 orb per atom, then orb = ia for orb,wz in zip(orbs, Wz): dH_CAP[orb, orb] = complex(0, -wz) CAP_list.append(idx) #print(list2range_TBTblock(idx)) CAP_list = np.concatenate(CAP_list).ravel().tolist() if write_xyz: # visualize CAP regions visualize = geometry.copy() visualize.atom[CAP_list] = si.Atom(8, R=[1.44]) visualize.write('CAP.xyz') return dH_CAP def read_fullTSHS(HSfilename, geomFDFfilename): """ Read Hamiltonian and Geometry objects and update Atoms properties of 'TSHS' from 'FDF' """ if isinstance(HSfilename, str): HSfile = si.get_sile(HSfilename).read_hamiltonian() else: HSfile = HSfilename.copy() if isinstance(geomFDFfilename, str): geomFDF = si.get_sile(geomFDFfilename).read_geometry(True) else: geomFDF = geomFDFfilename.copy() # Update species for ia, (a, afdf) in enumerate(zip(HSfile.atom, geomFDF.atom)): A = si.Atom(afdf.Z, a.orbital, afdf.mass, afdf.tag) HSfile.atom[ia] = A HSfile.reduce() return HSfile def T_from_bc(tbt, elec, idx_1, idx_2, E=None, kavg=True, write_xyz=None): if write_xyz: # visualize regions visualize = tbt.geom.copy() visualize.atom[idx_1] = si.Atom(8, R=[1.44]) visualize.atom[idx_2] = si.Atom(9, R=[1.44]) visualize.write('{}.xyz'.format(write_xyz)) if E: Eidx = tbt.Eindex(E) energies = np.array([tbt.E[Eidx]]) else: energies = tbt.E T = np.zeros(len(energies)) for ie,e in enumerate(energies): print('Doing E # {} of {} ({} eV)'.format(ie+1, len(energies), e)) bc = tbt.bond_current(elec, e, kavg=kavg, only='all', uc=True) T[ie] += bc[idx_1.reshape(-1, 1), idx_2.reshape(1, -1)].sum() return T def T_from_bc_from_orbital(tbt, elec, o_idx, idx_1, idx_2, E=None, kavg=True, write_xyz=None): if write_xyz: # visualize regions visualize = tbt.geom.copy() visualize.atom[idx_1] = si.Atom(8, R=[1.44]) visualize.atom[idx_2] = si.Atom(9, R=[1.44]) visualize.write('{}.xyz'.format(write_xyz)) if E: Eidx = tbt.Eindex(E) energies = np.array([tbt.E[Eidx]]) else: energies = tbt.E T = np.zeros(len(energies)) for ie,e in enumerate(energies): print('Doing E # {} of {} ({} eV)'.format(ie+1, len(energies), e)) Jij = tbt.orbital_current(elec, e, kavg=kavg) orbs_1 = tbt.geom.a2o(idx_1) + o_idx orbs_2 = tbt.geom.a2o(idx_2) + o_idx T[ie] = Jij[orbs_1.reshape(-1, 1), orbs_2.reshape(1, -1)].sum() #bc = tbt.bond_current(elec, e, kavg=kavg, only='all', uc=True) return T def list2range_TBTblock(lst): """ Convert a list of elements into a string of ranges Examples -------- >>> list2range([2, 4, 5, 6]) 2, 4-6 >>> list2range([2, 4, 5, 6, 8, 9]) 2, 4-6, 8-9 """ lst = [el+1 for el in lst] lst.sort() # Create positions pos = [j - i for i, j in enumerate(lst)] t = 0 rng = '' for _, els in groupby(pos): ln = len(list(els)) el = lst[t] if t > 0: rng += '\n' t += ln if ln == 1: rng += ' atom ['+str(el)+']' else: rng += ' atom [{} -- {}]'.format(el, el+ln-1) return rng def create_kpath(Nk): G2K = (0.4444444444444444 + 0.1111111111111111) ** 0.5 K2M = ((0.6666666666666666 - 0.5) ** 2 + (0.3333333333333333 - 0.5) ** 2) ** 0.5 M2G = (0.25 + 0.25) ** 0.5 Kdist = G2K + K2M + M2G NG2K = int(Nk / Kdist * G2K) NK2M = int(Nk / Kdist * K2M) NM2G = int(Nk / Kdist * M2G) def from_to(N, f, t): full = np.empty([N, 3]) ls = np.linspace(0, 1, N, endpoint=False) for i in range(3): full[:, i] = f[i] + (t[i] - f[i]) * ls return full kG2K = from_to(NG2K, [0.0, 0.0, 0.0], [0.6666666666666666, 0.3333333333333333, 0]) kK2M = from_to(NK2M, [0.6666666666666666, 0.3333333333333333, 0], [0.5, 0.5, 0.0]) kM2G = from_to(NM2G, [0.5, 0.5, 0.0], [0.0, 0.0, 0.0]) xtick = [0, NG2K - 1, NG2K + NK2M - 1, NG2K + NK2M + NM2G - 1] label = ['G', 'K', 'M', 'G'] return ([xtick, label], np.vstack((kG2K, kK2M, kM2G))) def plot_bandstructure(H, Nk, ymin=None, ymax=None, style='.', color='k', label=None): if type(H) is str: H = si.get_sile(H).read_hamiltonian() ticks, k = create_kpath(Nk) eigs = np.empty([len(k), H.no], np.float64) for ik, k in enumerate(k): print('{} / {}'.format(ik+1, Nk), end='\r') eigs[ik, :] = H.eigh(k=k, eigvals_only=True) ax = plt.gca() for n in range(H.no): print('{} / {}'.format(n+1, H.no), end='\r') ax.plot(eigs[:, n], style, color=color, label=label if n == 0 else "") ax.xaxis.set_ticks(ticks[0]) ax.set_xticklabels(ticks[1]) if ymin is None: ymin = ax.get_ylim()[0] if ymax is None: ymax = ax.get_ylim()[1] ax.set_ylim(ymin, ymax) for tick in ticks[0]: ax.plot([tick, tick], [ymin, ymax], 'k') return ax def list2colors(inp, colormap, vmin=None, vmax=None): norm = plt.Normalize(vmin, vmax) return colormap(norm(inp)) def get_dft_param(tshs, ia, iio, jjo, unique=False, onlynnz=False, idx=None): """ Read Hamiltonian and get coupling constants between 'iio'-th orbital of atom 'ia' and 'jjo'-th orbital of all other atoms """ # Read Hamiltonian if isinstance(tshs, str): tshs = si.get_sile(tshs).read_hamiltonian() HS = tshs.copy() # Index of iio-th orbital of ia-th atom io = HS.a2o(ia) + iio # Coupling elements (all orbitals) edges = HS.edges(orbital=io, exclude=-1) # Remove non-jjo connections # convert to atoms (only unique values) edges = HS.o2a(edges, unique=True) if idx is not None: mask = np.in1d(edges, idx) edges = edges[mask] # backconvert to the jjo'th orbital on the connecting atoms edges = HS.a2o(edges) + jjo r = HS.orij(io, edges) couplings = HS[io, edges] # Sort according to r idx_sorted = np.argsort(r) r = r[idx_sorted] couplings = couplings[idx_sorted, :] if unique: idx_uniq, cnt_uniq = np.unique(r.round(decimals=2), return_index=True, return_counts=True)[1:] r = r[idx_uniq] couplings = np.array([np.average(couplings[iu:(iu+cu), :], axis=0) for iu,cu in zip(idx_uniq, cnt_uniq)]) return r, couplings def get_R_hop(tshs, tbt, xyz_tip, pzidx, nn, z_gr=None, return_S=False): a_dev = tbt.a_dev tshs_dev = tshs.sub(a_dev) if z_gr == None: z_gr = tshs_dev.xyz[0, 2] C_list = (tshs_dev.xyz[:, 2] == z_gr).nonzero()[0] # Check that we have selected only carbon atoms for ia, a in zip(C_list, tshs_dev.atom[C_list]): if a.Z != 6: print('WARNING: Some atoms are not carbons in the graphene plane: {} {}'.format(ia, tshs_dev.xyz[ia])) # Get distances of all C atoms from tip (x,y) position # (notice that tshs_dev.xyz = tshs.xyz, so we need to use xyz_tip wrt full geom) #xyz_tip_dev = xyz_tip - tshs_dev.xyz[0] #xyz_tip_dev[2] = tshs_dev.xyz[0, 2] _, distance = tshs_dev.geom.close_sc(xyz_tip, R=np.inf, idx=C_list, ret_rij=True) # Get onsite and couplings for each of the atoms, up to the 3rd nn hoppings = np.empty((len(distance), nn+1)) if return_S: overlaps = np.empty((len(distance), nn+1)) for ia in C_list: # Extracting only pz-projected parameters from TSHS of graphene with tip _, tmp = get_dft_param(tshs_dev, ia, pzidx, pzidx, unique=True, onlynnz=True, idx=C_list) for i in range(nn+1): hoppings[ia, i] = tmp[i][0] if return_S: overlaps[ia, i] = tmp[i][1] # Write sorted data for future usage isort = np.argsort(distance) si.io.TableSile('couplings.txt', 'w').write_data(distance[isort], *hoppings[isort].T) if return_S: return distance[isort], hoppings[isort].T, overlaps[isort].T return distance[isort], hoppings[isort].T def plot_couplings_dft2tb(tshs_pristine, tshs, tbt, xyz_tip, pzidx=2, figname='dH.pdf'): """ Compare onsite and couplings of pristine graphene with those of a dirty graphene system. Plots both raw data and relative difference. # # param0[i][j] # i=0: on-site # i=1: 1nn coupling # i=2: 2nn coupling # i=3: 3nn coupling # j=0 : Hamiltonian matrix # j=1 : Overlap matrix Example: import sisl as si from tbtncTools import plot_couplings_dft2tb tshs_pristine = si.get_sile('../../pristine_300kpt/GR.TSHS').read_hamiltonian() tshs = si.get_sile('../../tip_atop_szp/z1.8/GR.TSHS').read_hamiltonian() tbt = si.get_sile('../../tip_atop_szp/z1.8/siesta.TBT.nc') xyz_tip = tshs.xyz[-1, :] plot_couplings_dft2tb(tshs_pristine, tshs, tbt, xyz_tip, pzidx=2, figname='dH.pdf') """ # Plot reference lines for well converged pristine graphene system fig = plt.figure() ax = fig.add_subplot(111) # Extracting only pz-projected parameters from TSHS of perfect graphene _, param0 = get_dft_param(tshs_pristine, 0, pzidx, pzidx, unique=True, onlynnz=True) # Plot ax.axhline(y=param0[0][0], label='On-site', c='k', ls='-') ax.axhline(y=param0[1][0], label='1nn coupling', c='g', ls='-') ax.axhline(y=param0[2][0], label='2nn coupling', c='r', ls='-') ax.axhline(y=param0[3][0], label='3nn coupling', c='b', ls='-') # Plot onsite and couplings for well converged "dirty" graphene system distance, param = get_R_hop(tshs, tbt, xyz_tip, pzidx) # Plot ax.scatter(distance, param[0], label='On-site (tip)', c='k')#, ls='--') ax.scatter(distance, param[1], label='1nn coupling (tip)', c='g')#, ls='--') ax.scatter(distance, param[2], label='2nn coupling (tip)', c='r')#, ls='--') ax.scatter(distance, param[3], label='3nn coupling (tip)', c='b')#, ls='--') # Mark the distance between the tip (x,y) and the closest distance from outmost frame atoms rM01 = np.absolute(np.amax(tshs.xyz[:, 0]) - xyz_tip[0]) rM02 = np.absolute(np.amin(tshs.xyz[:, 0]) - xyz_tip[0]) rM11 = np.absolute(np.amax(tshs.xyz[:, 1]) - xyz_tip[1]) rM12 = np.absolute(np.amin(tshs.xyz[:, 1]) - xyz_tip[1]) rM = np.amin([rM01, rM02, rM11, rM12]) ax.axvline(x=rM, c='k', ls='--') # General plot settings plt.xlim(0., np.amax(distance)) ax.set_xlabel('$r-r_{\mathrm{tip}}\,(\AA)$') ax.set_ylabel('E (eV)') plt.legend(loc=4, fontsize=10, ncol=2) plt.tight_layout() for o in fig.findobj(): o.set_clip_on(False) plt.savefig(figname) # Plot relative difference f, axes = plt.subplots(4, sharex=True) f.subplots_adjust(hspace=0) axes[0].scatter(distance, param[0]-np.full(len(distance), param0[0][0]), label='On-site', c='k') axes[1].scatter(distance, param[1]-np.full(len(distance), param0[1][0]), label='1nn coupling', c='g') axes[2].scatter(distance, param[2]-np.full(len(distance), param0[2][0]), label='2nn coupling', c='r') axes[3].scatter(distance, param[3]-np.full(len(distance), param0[3][0]), label='3nn coupling', c='b') # Mark the distance between the tip (x,y) and the closest distance from outmost frame atoms for a in axes: a.axhline(y=0., c='lightgrey', ls='-') a.axvline(x=rM, c='k', ls='--') #a.autoscale() a.set_xlim(0., np.amax(distance)) a.set_ylim(a.get_ylim()[0], 0.) a.yaxis.set_major_locator(plt.MaxNLocator(3)) # General plot settings axes[-1].set_xlabel('$r-r_{\mathrm{tip}}\,(\AA)$') f.text(0.025, 0.5, '$\Delta E $ (eV)', ha="center", va="center", rotation=90) #for o in f.findobj(): # o.set_clip_on(False) plt.setp([a.get_xticklabels() for a in f.axes[:-1]], visible=False) plt.savefig('diff_'+figname) def sc_xyz_shift(geom, axis): return (geom.cell[axis,axis] - (np.amax(geom.xyz[:,axis]) - np.amin(geom.xyz[:,axis])))/2 #def Delta(TSHS, HS_TB, shape='Cuboid', z_graphene=None, ext_offset=None, center=None, def Delta(TSHS, shape='Cuboid', z_graphene=None, ext_offset=None, center=None, thickness=None, zaxis=2, atoms=None, segment_dir=None): # z coordinate of graphene plane if z_graphene is None: print('\n\nPlease provide a value for z_graphene in Delta routine') exit(1) # Center of shape in TSHS if center is None: center = TSHS.center(atom=(TSHS.xyz[:,zaxis] == z_graphene).nonzero()[0]) center = np.asarray(center) # Thickness in Ang if thickness is None: thickness = 6. # Ang #thickness = HS_TB.maxR()+0.01 thickness = np.asarray(thickness, np.float64) # Cuboid or Ellissoid? if zaxis == 2: size = .5*np.diagonal(TSHS.cell) + [0,0,300] # default radius is half the cell size elif zaxis == 0: size = .5*np.diagonal(TSHS.cell) + [300,0,0] # default radius is half the cell size elif zaxis == 1: size = .5*np.diagonal(TSHS.cell) + [0,300,0] # default radius is half the cell size if shape == 'Ellipsoid' or shape == 'Sphere': mkshape = si.shape.Ellipsoid elif shape == 'Cuboid' or shape == 'Cube': mkshape = si.shape.Cuboid # In this case it's the full perimeter so we double size *= 2 thickness *= 2 if ext_offset is not None: ext_offset = np.asarray(ext_offset, np.float64).copy() ext_offset *= 2 elif shape == 'Segment': mkshape = si.shape.Cuboid # In this case it's the full perimeter so we double size *= 2 area_tot = mkshape(size, center=TSHS.center(atom=(TSHS.xyz[:,zaxis] == z_graphene).nonzero()[0])) size[segment_dir] = thickness if ext_offset is not None: ext_offset = np.asarray(ext_offset, np.float64).copy() else: print('\n shape = "{}" is not implemented...'.format(shape)) exit(1) if shape == 'Segment': # ADD COMPLEMENTARY AREA... # Areas Delta = mkshape(size, center=center) # Atoms within Delta and complementary area a_Delta = Delta.within_index(TSHS.xyz) if atoms is not None: a_Delta = a_Delta[np.in1d(a_Delta, atoms)] # Check v = TSHS.geom.copy(); v.atom[a_Delta] = si.Atom(8, R=[1.43]); v.write('a_Delta.xyz') return a_Delta, Delta else: # External boundary area_ext = mkshape(size, center=center) # Adjust with ext_offset if necessary if ext_offset is not None: ext_offset = np.asarray(ext_offset, np.float64) area_ext = area_ext.expand(-ext_offset) # Force it to be Cube or Sphere (side = ext_offset) if necessary if shape == 'Sphere' or shape == 'Cube': if len(ext_offset.nonzero()[0]) > 1: print('Offset is in both axes. Please set "shape" to Cuboid or Ellipsoid') exit(1) axis = ext_offset.nonzero()[0][0] print('Offset is non-zero along axis: {}...complementary is {}'.format(axis, int(axis<1))) new_ext_offset = np.zeros(3); new_ext_offset[int(axis<1)] = ext_offset[axis] area_ext = area_ext.expand(-new_ext_offset) #a_ext = area_ext.within_index(TSHS.xyz) # Internal boundary area_int = area_ext.expand(-thickness) # Disjuction composite shape Delta = area_ext - area_int # Atoms within Delta and internal boundary a_Delta = Delta.within_index(TSHS.xyz) a_int = area_int.within_index(TSHS.xyz) if atoms is not None: a_Delta = a_Delta[np.in1d(a_Delta, atoms)] # Check v = TSHS.geom.copy(); v.atom[a_Delta] = si.Atom(8, R=[1.43]); v.write('a_Delta.xyz') return a_Delta, a_int, Delta, area_ext, area_int def makeTB(TSHS_0, pzidx, nn, WW, LL, elec=None, save=True, return_bands=False): """ TSHS_0: tbtncSile object from "pristine graphene" reference calculation pzidx: index of pz orbitals in the basis set used to create 'TSHS_0' nn: no. of neighbours to be used in the TB model W: width of TB geometry (Angstrom) - transverse direction: 0 - L: length of TB geometry (Angstrom) - transport direction: 1 - elec: tbtncSile object from electrode calculation """ ########################## From PERFECT graphene reference TSHS dR = 0.005 # Check for a in TSHS_0.atom.atom: if a.Z != 6: print('ERROR: cannot build TB model because the provided geometry \ is not a pristine graphene') exit(1) # Extracting only pz-projected parameters from TSHS of perfect graphene r, param = get_dft_param(TSHS_0, 0, pzidx, pzidx, unique=True, onlynnz=True) print('\nEffective no. of neighbors per atom from TSHS_0: {}'.format(len(r)-1)) print('\nr ({}; Angstrom)\t param ({}; eV):'.format(len(r), len(param))) for ri, ci in zip(r, param): print('{:.5f} \t '.format(ri), ci) def get_graphene_H(radii, param, dR=dR): # In order to get the correct radii of the orbitals it is # best to define them explicitly. # This enables one to "optimize" the number of supercells # subsequently. # Define the radii of the orbital to be the maximum C = si.Atom(6, R=radii[-1] + dR) # Define graphene g = si.geom.graphene(radii[1], C, orthogonal=True) g.optimize_nsc() # Now create Hamiltonian H = si.Hamiltonian(g, orthogonal=False) # Define primitive also for check of bandstructure g_s = si.geom.graphene(radii[1], C) g_s.optimize_nsc() H_s = si.Hamiltonian(g_s, orthogonal=False) if len(param.shape) == 1: # Create a new fake parameter # with overlap elements new_param = np.zeros([len(param), 2], dtype=np.float64) new_param[:, 0] = param new_param[0, 1] = 1. # on-site, everything else, zero param = new_param H.construct((radii+dR, param)) H_s.construct((radii+dR, param)) return H, H_s # Setup the Hamiltonian building block if nn is 'all': print('WARNING: you are retaining ALL interactions from DFT model') H0, H0_s = get_graphene_H(r, param) else: print('WARNING: you are retaining only interactions up to {} neighbours'.format(nn)) H0, H0_s = get_graphene_H(r[:nn+1], param[:nn+1]) print('\nBuilding block for TB model:\n', H0) # Setup TB model W, L = int(round(WW/H0.cell[0,0])), int(round(LL/H0.cell[1,1])) # ELECTRODE if elec is not None: n_el = int(round(elec.cell[1,1]/H0.cell[1,1])) else: n_el = 2 HS_elec = H0.tile(W, 0).tile(n_el, 1) HS_elec.write('HS_ELEC.nc') HS_elec.geom.write('HS_ELEC.fdf') HS_elec.geom.write('HS_ELEC.xyz') # DEVICE + ELECTRODES (to be written ONLY after selection and rearranging of GF/dSE area) HS_dev = H0.tile(W, 0).tile(L, 1) if save: HS_dev.write('HS_DEV_0.nc') HS_dev.geom.write('HS_DEV_0.fdf') HS_dev.geom.write('HS_DEV_0.xyz') # Check bands with primitive cell if return_bands: # Open figure outside and bands will automatically be added to the plot plot_bandstructure(H0_s, 400, ymin=-3, ymax=3, style='-', color='k', label='Pristine $p_z$ parameters') return HS_dev def makeTB_FrameOutside(tshs, tbt, center, TSHS_0, pzidx, nn, WW, LL, elec=None, save=True, return_bands=False, z_graphene=None): """ tshs: TSHS object from "dirty graphene" calculation tbt: tbtncSile object from tbtrans calculation with HS: "tshs" TSHS_0: TSHS object from "pristine graphene" reference calculation pzidx: index of pz orbitals in the basis set used to create 'TSHS_0' nn: no. of neighbours to be used in the TB model WW: width of TB geometry (Angstrom) - transverse direction: 0 - LL: length of TB geometry (Angstrom) - transport direction: 1 - TSHS_elec: tbtncSile object from electrode calculation save: True will store device region netcdf files for usage in tbtrans """ ########################## From PERFECT graphene reference TSHS dR = 0.005 # Check that TSHS_0 has only carbon atoms for a in TSHS_0.atom.atom: if a.Z != 6: print('ERROR: cannot build TB model because the provided geometry\n\tis not a pristine graphene') exit(1) # Extracting only pz-projected parameters from TSHS of perfect graphene r, param = get_dft_param(TSHS_0, 0, pzidx, pzidx, unique=True, onlynnz=True) print('\nEffective no. of neighbors per atom from TSHS_0: {}'.format(len(r)-1)) print('r ({}; Angstrom)\t param ({}; eV):'.format(len(r), len(param))) for ri, ci in zip(r, param): print('{:.5f} \t '.format(ri), ci) # Setup the Hamiltonian building block if nn is 'all': nn = len(r)-1 # The reference values we wish to target (pristine graphene) ref_r, ref_hop, ref_over = r[:nn+1], param[:nn+1, 0], param[:nn+1, 1] print('Targeted no. of neighbors per atom from TSHS_0: {}'.format(len(ref_r)-1)) print('r ({}; Angstrom)\t param ({}; eV):'.format(len(ref_r), len(ref_hop))) for ri, ci, oi in zip(ref_r, ref_hop, ref_over): print('{:.5f} \t '.format(ri), ci, oi) # R and hopping from tshs, center is the coordinates of the tip apex # This works Only if the frame is the outmost atoms in tbt.a_dev # Maybe it's better to define a shape here! if z_graphene is None: print('\n\nPlease provide a value for z_graphene') exit(1) if center is None: center = tshs.center(atom=(tshs.xyz[:,2] == z_graphene).nonzero()[0]) print('makeTB: you are considering this as center: {}'.format(center)) distances, hop = get_R_hop(tshs, tbt, center, pzidx, nn, z_gr=z_graphene) hop_atframe = [np.average(hop[i, np.arange(-10, 0)]) for i in range(nn+1)] # r's to plot r2plot = np.linspace(0, np.amax(distances), 1000) f, ax = plt.subplots(nn+1, sharex=True) for i in range(nn+1): ax[i].scatter(distances, hop[i, :]) # Plot lines ax[i].plot([r2plot.min(), r2plot.max()], [ref_hop[i], ref_hop[i]], '--') ymin = np.amin([ref_hop[i], hop_atframe[i]]) - 0.1 ymax = np.amax([ref_hop[i], hop_atframe[i]]) + 0.1 ax[i].set_ylim(ymin, ymax) ax[i].set_xlim(r2plot.min(), r2plot.max()) f.savefig('shifting_data.pdf') plt.close(f) ###### Create device Hamiltonian bond = ref_r[1] # to make it fit in a smaller unit-cell C = si.Atom(6, R=ref_r[-1] + dR) g0 = si.geom.graphene(bond, C, orthogonal=True) g0.optimize_nsc() H0 = si.Hamiltonian(g0, orthogonal=False) print('\nNo. of neighbors per atom: {}'.format(len(ref_r)-1)) print('r ({}; Angstrom)\t Final parameters from frame ({}; eV):'.format(len(ref_r), len(hop_atframe))) for ri, ci, oi in zip(ref_r, hop_atframe, ref_over): print('{:.5f} \t '.format(ri), ci, oi) # Construct TB. onsite is the same as tip tshs, while couplings are the same as pristine H0.construct((ref_r+dR, zip(hop_atframe, ref_over)), eta=True) # DEVICE + ELECTRODES geometry # Width and length of device W, L = int(round(WW/g0.cell[0,0])), int(round(LL/g0.cell[1,1])) print('Device is {} x {} supercell of the unit orthogonal cell'.format(W, L)) # (nc files should be written ONLY after selection and rearranging of GF/dSE area) HS_dev = H0.tile(W, 0).tile(L, 1) if save: HS_dev.write('HS_DEV.nc') HS_dev.geom.write('HS_DEV.fdf') HS_dev.geom.write('HS_DEV.xyz') # ELECTRODE if elec is not None: n_el = int(round(elec.cell[1,1]/H0.cell[1,1])) else: n_el = 2 HS_elec = H0.tile(W, 0).tile(n_el, 1) HS_elec.write('HS_ELEC.nc') HS_elec.geom.write('HS_ELEC.fdf') HS_elec.geom.write('HS_ELEC.xyz') # Check bands with primitive cell if return_bands: g0_s = si.geom.graphene(bond, C) g0_s.optimize_nsc() H0_s = si.Hamiltonian(g0_s, orthogonal=False) H0_s.construct((ref_r+dR, zip(hop_atframe, ref_over))) # Open figure outside and bands will automatically be added to the plot plot_bandstructure(H0_s, 400, ymin=-3, ymax=3, style='--', color='r', label='Pristine w/ tip $p_z$ onsite') return HS_dev def interp1d(x, y, y0, y1): """ Create an interpolation function from x, y. The resulting function has these properties: x < x.min(): f(x) = y0 x.min() < x < x.max(): f(x) = y x.max() < x: f(x) = y1 """ return sp.interpolate.interp1d(x, y, bounds_error=False, fill_value=(y0, y1)) def func_smooth_fermi(x, y, first_x, second_x, y1, delta=8): """ Return an interpolation function with the following properties: x < first_x: f(x) = y(first_x) first_x < x < second_x: f(x) = y second_x < x f(x) = y1 `delta` determines the amount of the smearing width that is between `first_x` and `second_x`. Parameters ---------- x, y : numpy.ndarray x/y-data points first_x : float the point of cut-off for the x-values. In this approximation we assume the `y` data-points has a plateau in the neighbourhood of `first_x` second_x : float above this `x` value all values will be `y1`. y1 : float second boundary value delta : float, optional amount of smearing parameter in between `first_x` and `second_x` (should not be below 6!). """ # First we will find the first flat plateau # We do this considering values -3 : +3 Ang if first_x < np.amax(x): raise ValueError("first_x has to be larger than maximum, interpolation x value") # First we will find the first flat plateau # We do this considering values -3 : r_max Ang idx = (np.amax(x) - x > -3.).nonzero()[0] y0 = np.average(y[idx]) # We already have the second plateau. # So all we have to do is calculate the smearing # to capture the smoothing range mid_x = (first_x + second_x) / 2 sigma = (second_x - first_x) / delta if y0 < y1: sigma = - sigma b = y0 else: b = y1 # Now we can create the function dd = delta / 2. + 1. ## Now calculate function parameters used for interpolation #x = np.arange(first_x - dd , second_x + dd, 0.01) # 0.01 Ang precision #y = abs(y1 - y0) / (np.exp((x - mid_x) / sigma) + 1) + b #return interp1d(x, y, y0, y1) # Now we can create the function dd = delta / 2. + 1. # Now calculate function parameters used for interpolation xff = np.arange(first_x, second_x + 2 * dd, 0.01) # 0.01 Ang precision yff = abs(y1 - y0) / (np.exp((x - mid_x) / sigma) + 1) + b return interp1d(np.append(x, xff), np.append(y, yff), y[0], y1) def func_smooth_linear(x, y): return sp.interpolate.interp1d(x, y, kind='cubic', fill_value=(y[0], y[-1]), bounds_error=False) def func_smooth(x, y, first_x=None, second_x=None, y1=None, delta=8, what='linear'): if what is None: what = 'linear' if what == 'fermi': return func_smooth_fermi(x, y, first_x, second_x, y1, delta) elif what == 'linear': return func_smooth_linear(x, y) def makeTB_InterpFrame(tshs, tbt, xyz_tip, TSHS_0, pzidx, nn, WW, LL, elec=None, save=True, return_bands=False, avg=False): """ tshs: TSHS object from "dirty graphene" calculation tbt: tbtncSile object from tbtrans calculation with HS: "tshs" TSHS_0: TSHS object from "pristine graphene" reference calculation pzidx: index of pz orbitals in the basis set used to create 'TSHS_0' nn: no. of neighbours to be used in the TB model WW: width of TB geometry (Angstrom) - transverse direction: 0 - LL: length of TB geometry (Angstrom) - transport direction: 1 - TSHS_elec: tbtncSile object from electrode calculation save: True will store device region netcdf files for usage in tbtrans """ ########################## From PERFECT graphene reference TSHS dR = 0.005 # Check that TSHS_0 has only carbon atoms for a in TSHS_0.atom.atom: if a.Z != 6: print('ERROR: cannot build TB model because the provided geometry\n\tis not a pristine graphene') exit(1) # Extracting only pz-projected parameters from TSHS of perfect graphene r, param = get_dft_param(TSHS_0, 0, pzidx, pzidx, unique=True, onlynnz=True) print('\nEffective no. of neighbors per atom from TSHS_0: {}'.format(len(r)-1)) print('r ({}; Angstrom)\t param ({}; eV):'.format(len(r), len(param))) for ri, ci in zip(r, param): print('{:.5f} \t '.format(ri), ci) # Setup the Hamiltonian building block if nn is 'all': nn = len(r)-1 # The reference values we wish to target (pristine graphene) ref_r, ref_hop, ref_over = r[:nn+1], param[:nn+1, 0], param[:nn+1, 1] print('Targeted no. of neighbors per atom from TSHS_0: {}'.format(len(ref_r)-1)) print('r ({}; Angstrom)\t param ({}; eV):'.format(len(ref_r), len(ref_hop))) for ri, ci, oi in zip(ref_r, ref_hop, ref_over): print('{:.5f} \t '.format(ri), ci, oi) # Get distance from tip and relative hoppings, sorted distances, hop = get_R_hop(tshs, tbt, xyz_tip, pzidx, nn) if avg: hop_atframe = [np.average(hop[i, np.arange(-10, 0)]) for i in range(nn+1)] else: fit = [func_smooth(distances, hop[i, :]) for i in range(nn+1)] # r's to plot r2plot = np.linspace(0, 1.2*distances[-1], 1000) f, ax = plt.subplots(nn+1, sharex=True) for i in range(nn+1): ax[i].scatter(distances, hop[i, :]) ax[i].plot(r2plot, fit[i](r2plot)) # Plot lines #ax[i].plot([r2plot.min(), r2plot.max()], [ref_hop[i], ref_hop[i]], '--') #ymin = np.amin([ref_hop[i], fit[i](distances[-1])]) - 0.1 #ymax = np.amax([ref_hop[i], fit[i](distances[-1])]) + 0.1 #ax[i].plot([distances[-1], distances[-1]], [ymin, ymax], '--') #ax[i].set_ylim(ymin, ymax) ax[i].set_xlim(r2plot.min(), r2plot.max()) f.savefig('fit_data.pdf') plt.close(f) ftyifti ###### Create device Hamiltonian using the correct parameters bond = ref_r[1] # to make it fit in a smaller unit-cell C = si.Atom(6, R=ref_r[-1] + dR) g0 = si.geom.graphene(bond, C, orthogonal=True) g0.optimize_nsc() # Width and length of device W, L = int(round(WW/g0.cell[0,0])), int(round(LL/g0.cell[1,1])) # DEVICE + ELECTRODES geometry (without PBC!!!) # (nc files should be written ONLY after selection and rearranging of GF/dSE area) g = g0.tile(W, 0).tile(L, 1) g.set_nsc([1] *3) HS_dev = si.Hamiltonian(g, orthogonal=False) # Create the connectivity values Hc = [np.empty(len(g)) for i in range(nn+1)] # # Get tip (x,y) position in large TB # frameOrigin_xyz = g.xyz[frameOrigin-TSHS_elec.na] # print('Frame reference (x, y, z=z_graphene) coordinates (low-left) in large TB geometry are:\n\t{}'.format(frameOrigin_xyz)) # c_xyz = frameOrigin_xyz + xyz_tip # c_xyz[2] = frameOrigin_xyz[2] # print('Tip (x, y, z=z_graphene) coordinates in large TB geometry are:\n\t{}'.format(c_xyz)) # c_xyz = c_xyz.reshape(1, 3) # Now loop and construct the Hamiltonian def func(self, ia, idxs, idxs_xyz=None): idx_a, xyz_a = self.geom.close(ia, R=ref_r+dR, idx=idxs, idx_xyz=idxs_xyz, ret_xyz=True) # Calculate distance to center # on-site does not need averaging rr = np.sqrt(np.square(xyz_a[0] - c_xyz).sum(1)) f = fit[0](rr) self[ia, idx_a[0], 0] = f self[ia, idx_a[0], 1] = ref_over[0] Hc[0][ia] = np.average(f) xyz = g.xyz[ia, :].reshape(1, 3) for i in range(1, len(idx_a)): rr = np.sqrt(np.square((xyz_a[i] + xyz)/2 - c_xyz).sum(1)) f = fit[i](rr) self[ia, idx_a[i], 0] = f self[ia, idx_a[i], 1] = ref_over[i] Hc[i][ia] = np.average(f) HS_dev.construct(func, eta=True) # Extract at Gamma for plot Hk = HS_dev.tocsr(0) # Check for Hermiticity if np.abs(Hk - Hk.T).max() != 0.: print('ERROR: Hamitonian is NOT HERMITIAN!') exit(0) # Plot onsite and coupling maps cm = plt.cm.get_cmap('RdYlBu') x = HS_dev.xyz[:, 0] y = HS_dev.xyz[:, 1] for i in range(nn+1): plt.figure() z = Hc[i] sc = plt.scatter(x, y, c=abs(z), edgecolor='none', cmap=cm) plt.colorbar(sc) plt.savefig('fermifit_{}.png'.format(i), dpi=300) if save: HS_dev.write('HS_DEV.nc') HS_dev.geom.write('HS_DEV.fdf') HS_dev.geom.write('HS_DEV.xyz') # ELECTRODE n_el = int(round(TSHS_elec.cell[1,1]/g0.cell[1,1])) H0 = si.Hamiltonian(g0, orthogonal=False) H0.construct((ref_r+dR, zip(ref_hop, ref_over))) HS_elec = H0.tile(W, 0).tile(n_el, 1) HS_elec.write('HS_ELEC.nc') HS_elec.geom.write('HS_ELEC.fdf') HS_elec.geom.write('HS_ELEC.xyz') # Check bands with primitive cell if return_bands: g0_s = si.geom.graphene(bond, C) g0_s.optimize_nsc() H0_s = si.Hamiltonian(g0_s, orthogonal=False) H0_s.construct((ref_r+dR, zip(ref_hop, ref_over))) # Open figure outside and bands will automatically be added to the plot plot_bandstructure(H0_s, 400, ymin=-3, ymax=3, style='-.', color='b', label='After Fermi fit') return HS_dev ### TO FIX def makeTB_fermi(tshs, tbt, xyz_tip, frameOrigin, TSHS_0, pzidx, nn, WW, LL, elec, save=True, cut_R=None, smooth_R=15., return_bands=False): """ tshs: TSHS object from "dirty graphene" calculation tbt: tbtncSile object from tbtrans calculation with HS: "tshs" xyz_tip: coordinates of tip apex atom in tshs, after setting z=z_graphene TSHS_0: TSHS object from "pristine graphene" reference calculation pzidx: index of pz orbitals in the basis set used to create 'TSHS_0' nn: no. of neighbours to be used in the TB model WW: width of TB geometry (Angstrom) - transverse direction: 0 - LL: length of TB geometry (Angstrom) - transport direction: 1 - elec: tbtncSile object from electrode calculation save: True will store device region netcdf files for usage in tbtrans smooth_R: The length over which we will smooth the function (Angstrom) """ ########################## From PERFECT graphene reference TSHS dR = 0.005 # Check that TSHS_0 has only carbon atoms for a in TSHS_0.atom.atom: if a.Z != 6: print('ERROR: cannot build TB model because the provided geometry\n\tis not a pristine graphene') exit(1) # Extracting only pz-projected parameters from TSHS of perfect graphene r, param = get_dft_param(TSHS_0, 0, pzidx, pzidx, unique=True, onlynnz=True) print('Effective no. of neighbors per atom from TSHS_0: {}'.format(len(r)-1)) print('r ({}; Angstrom)\t param ({}; eV):'.format(len(r), len(param))) for ri, ci in zip(r, param): print('{:.5f} \t '.format(ri), ci) # Setup the Hamiltonian building block if nn is 'all': nn = len(r)-1 # The reference values we wish to target (pristine graphene) ref_r, ref_hop, ref_over = r[:nn+1], param[:nn+1, 0], param[:nn+1, 1] print('Targeted no. of neighbors per atom from TSHS_0: {}'.format(len(ref_r)-1)) print('r ({}; Angstrom)\t param ({}; eV):'.format(len(ref_r), len(ref_hop))) for ri, ci, oi in zip(ref_r, ref_hop, ref_over): print('{:.5f} \t '.format(ri), ci, oi) # R and hopping from tshs, xyz_tip is the coordinates of the tip apex # This works Only if the frame is the outmost atoms in tbt.a_dev # Maybe it's better to define a shape here! distances, hop = get_R_hop(tshs, tbt, xyz_tip, pzidx, nn) # Create Fermi-like function to smooth hop towards ref_hop print(np.amax(distances)) print(cut_R) if cut_R is None: cut_R = np.amax(distances) print('\nCutoff radius in TSHS: {} Ang'.format(cut_R)) fermi_fit = [func_smooth(distances, hop[i, :], cut_R, cut_R + smooth_R, ref_hop[i]) for i in range(nn+1)] # r's to plot r2plot = np.linspace(0, cut_R+1.2*smooth_R, 1000) f, ax = plt.subplots(nn+1, sharex=True) for i in range(nn+1): ax[i].scatter(distances, hop[i, :]) ax[i].plot(r2plot, fermi_fit[i](r2plot)) # Plot lines ax[i].plot([r2plot.min(), r2plot.max()], [ref_hop[i], ref_hop[i]], '--') ymin = np.amin([ref_hop[i], fermi_fit[i](cut_R)]) - 0.1 ymax = np.amax([ref_hop[i], fermi_fit[i](cut_R)]) + 0.1 ax[i].plot([cut_R, cut_R], [ymin, ymax], '--') ax[i].plot([cut_R+smooth_R, cut_R+smooth_R], [ymin, ymax], '--') ax[i].set_ylim(ymin, ymax) ax[i].set_xlim(r2plot.min(), r2plot.max()) f.savefig('fermifit_data.pdf') plt.close(f) fuifguyi ###### Create device Hamiltonian using the correct parameters bond = ref_r[1] # to make it fit in a smaller unit-cell C = si.Atom(6, R=ref_r[-1] + dR) g0 = si.geom.graphene(bond, C, orthogonal=True) g0.optimize_nsc() # Width and length of device W, L = int(round(WW/g0.cell[0,0])), int(round(LL/g0.cell[1,1])) # DEVICE + ELECTRODES geometry # (nc files should be written ONLY after selection and rearranging of GF/dSE area) # MAYBE NEED TO STORE THIS ONLY AFTERWORDS!!!! OR MAYBE NOT... g = g0.tile(W, 0).tile(L, 1) g.set_nsc([1] *3) HS_dev = si.Hamiltonian(g, orthogonal=False) # Create the connectivity values Hc = [np.empty(len(g)) for i in range(nn+1)] # Get tip (x,y) position in large TB frameOrigin_xyz = g.xyz[frameOrigin-elec.na] print('Frame reference (x, y, z=z_graphene) coordinates (low-left) in large TB geometry are:\n\t{}'.format(frameOrigin_xyz)) c_xyz = frameOrigin_xyz + xyz_tip c_xyz[2] = frameOrigin_xyz[2] print('Tip (x, y, z=z_graphene) coordinates in large TB geometry are:\n\t{}'.format(c_xyz)) c_xyz = c_xyz.reshape(1, 3) # Now loop and construct the Hamiltonian def func(self, ia, idxs, idxs_xyz=None): xyz = g.xyz[ia, :].reshape(1, 3) idx_a, xyz_a = self.geom.close(ia, R=ref_r+dR, idx=idxs, idx_xyz=idxs_xyz, ret_xyz=True) # Calculate distance to center # on-site does not need averaging rr = np.sqrt(np.square(xyz_a[0] - c_xyz).sum(1)) f = fermi_fit[0](rr) self[ia, idx_a[0], 0] = f self[ia, idx_a[0], 1] = ref_over[0] Hc[0][ia] = np.average(f) for i in range(1, len(idx_a)): rr = np.sqrt(np.square((xyz_a[i] + xyz)/2 - c_xyz).sum(1)) f = fermi_fit[i](rr) self[ia, idx_a[i], 0] = f self[ia, idx_a[i], 1] = ref_over[i] Hc[i][ia] = np.average(f) HS_dev.construct(func, eta=True) # Extract at Gamma for plot Hk = HS_dev.tocsr(0) # Check for Hermiticity if np.abs(Hk - Hk.T).max() != 0.: print('ERROR: Hamitonian is NOT HERMITIAN!') exit(0) # Plot onsite and coupling maps cm = plt.cm.get_cmap('RdYlBu') x = HS_dev.xyz[:, 0] y = HS_dev.xyz[:, 1] for i in range(nn+1): plt.figure() z = Hc[i] sc = plt.scatter(x, y, c=abs(z), edgecolor='none', cmap=cm) plt.colorbar(sc) plt.savefig('fermifit_{}.png'.format(i), dpi=300) if save: HS_dev.write('HS_DEV.nc') HS_dev.geom.write('HS_DEV.fdf') HS_dev.geom.write('HS_DEV.xyz') # ELECTRODE n_el = int(round(elec.cell[1,1]/g0.cell[1,1])) H0 = si.Hamiltonian(g0, orthogonal=False) H0.construct((ref_r+dR, zip(ref_hop, ref_over))) HS_elec = H0.tile(W, 0).tile(n_el, 1) HS_elec.write('HS_ELEC.nc') HS_elec.geom.write('HS_ELEC.fdf') HS_elec.geom.write('HS_ELEC.xyz') # Check bands with primitive cell if return_bands: g0_s = si.geom.graphene(bond, C) g0_s.optimize_nsc() H0_s = si.Hamiltonian(g0_s, orthogonal=False) H0_s.construct((ref_r+dR, zip(ref_hop, ref_over))) # Open figure outside and bands will automatically be added to the plot plot_bandstructure(H0_s, 400, ymin=-3, ymax=3, style='-.', color='b', label='After Fermi fit') return HS_dev ### NOT REALLY USEFUL def makeTB_shifted(tshs, tbt, xyz_tip, TSHS_0, pzidx, nn, WW, LL, TSHS_elec, save=True, shifted=True, return_bands=False): """ tshs: TSHS object from "dirty graphene" calculation tbt: tbtncSile object from tbtrans calculation with HS: "tshs" TSHS_0: TSHS object from "pristine graphene" reference calculation pzidx: index of pz orbitals in the basis set used to create 'TSHS_0' nn: no. of neighbours to be used in the TB model WW: width of TB geometry (Angstrom) - transverse direction: 0 - LL: length of TB geometry (Angstrom) - transport direction: 1 - TSHS_elec: tbtncSile object from electrode calculation save: True will store device region netcdf files for usage in tbtrans """ ########################## From PERFECT graphene reference TSHS dR = 0.005 # Check that TSHS_0 has only carbon atoms for a in TSHS_0.atom.atom: if a.Z != 6: print('ERROR: cannot build TB model because the provided geometry\n\tis not a pristine graphene') exit(1) # Extracting only pz-projected parameters from TSHS of perfect graphene r, param = get_dft_param(TSHS_0, 0, pzidx, pzidx, unique=True, onlynnz=True) print('\nEffective no. of neighbors per atom from TSHS_0: {}'.format(len(r)-1)) print('r ({}; Angstrom)\t param ({}; eV):'.format(len(r), len(param))) for ri, ci in zip(r, param): print('{:.5f} \t '.format(ri), ci) # Setup the Hamiltonian building block if nn is 'all': nn = len(r)-1 # The reference values we wish to target (pristine graphene) ref_r, ref_hop, ref_over = r[:nn+1], param[:nn+1, 0], param[:nn+1, 1] print('Targeted no. of neighbors per atom from TSHS_0: {}'.format(len(ref_r)-1)) print('r ({}; Angstrom)\t param ({}; eV):'.format(len(ref_r), len(ref_hop))) for ri, ci, oi in zip(ref_r, ref_hop, ref_over): print('{:.5f} \t '.format(ri), ci, oi) # R and hopping from tshs, xyz_tip is the coordinates of the tip apex # This works Only if the frame is the outmost atoms in tbt.a_dev # Maybe it's better to define a shape here! distances, hop = get_R_hop(tshs, tbt, xyz_tip, pzidx, nn) hop_atframe = [np.average(hop[i, np.arange(-10, 0)]) for i in range(nn+1)] # r's to plot r2plot = np.linspace(0, np.amax(distances), 1000) f, ax = plt.subplots(nn+1, sharex=True) for i in range(nn+1): ax[i].scatter(distances, hop[i, :]) # Plot lines ax[i].plot([r2plot.min(), r2plot.max()], [ref_hop[i], ref_hop[i]], '--') ymin = np.amin([ref_hop[i], hop_atframe[i]]) - 0.1 ymax = np.amax([ref_hop[i], hop_atframe[i]]) + 0.1 ax[i].set_ylim(ymin, ymax) ax[i].set_xlim(r2plot.min(), r2plot.max()) f.savefig('shifting_data.pdf') plt.close(f) ###### Create device Hamiltonian using shifted on-site energy bond = ref_r[1] # to make it fit in a smaller unit-cell C = si.Atom(6, R=ref_r[-1] + dR) g0 = si.geom.graphene(bond, C, orthogonal=True) g0.optimize_nsc() H0 = si.Hamiltonian(g0, orthogonal=False) ref_hop_onshifted = ref_hop.copy() if shifted: ref_hop_onshifted[0] = hop_atframe[0] print('\nFinal no. of neighbors per atom retained from TSHS_0: {}'.format(len(ref_r)-1)) print('r ({}; Angstrom)\t Final parameters ({}; eV):'.format(len(ref_r), len(ref_hop_onshifted))) for ri, ci, oi in zip(ref_r, ref_hop_onshifted, ref_over): print('{:.5f} \t '.format(ri), ci, oi) # Construct TB. onsite is the same as tip tshs, while couplings are the same as pristine H0.construct((ref_r+dR, zip(ref_hop_onshifted, ref_over))) # DEVICE + ELECTRODES geometry # Width and length of device W, L = int(round(WW/g0.cell[0,0])), int(round(LL/g0.cell[1,1])) # (nc files should be written ONLY after selection and rearranging of GF/dSE area) HS_dev = H0.tile(W, 0).tile(L, 1) if save: HS_dev.write('HS_DEV.nc') HS_dev.geom.write('HS_DEV.fdf') HS_dev.geom.write('HS_DEV.xyz') # ELECTRODE n_el = int(round(TSHS_elec.cell[1,1]/g0.cell[1,1])) HS_elec = H0.tile(W, 0).tile(n_el, 1) HS_elec.write('HS_ELEC.nc') HS_elec.geom.write('HS_ELEC.fdf') HS_elec.geom.write('HS_ELEC.xyz') # Check bands with primitive cell if return_bands: g0_s = si.geom.graphene(bond, C) g0_s.optimize_nsc() H0_s = si.Hamiltonian(g0_s, orthogonal=False) H0_s.construct((ref_r+dR, zip(ref_hop_onshifted, ref_over))) # Open figure outside and bands will automatically be added to the plot plot_bandstructure(H0_s, 400, ymin=-3, ymax=3, style='--', color='r', label='Pristine w/ tip $p_z$ onsite') return HS_dev def plot_transmission(H, iE1, iE2, ymin=None, ymax=None, style='-', color='k', label=None, xshift=0, yshift=0, plus=None, plot=True, lw=1): print('Plotting transmission from elec {} to elec {} in: {}'.format(iE1, iE2, H)) H = si.get_sile(H) tr = H.transmission(H.elecs[iE1], H.elecs[iE2]) ax = plt.gca() if not plot: return ax, tr if plus is not None: ax.plot(H.E+xshift, tr+plus+yshift, style, color=color, label=label, linewidth=lw) else: ax.plot(H.E+xshift, tr+yshift, style, color=color, label=label, linewidth=lw) if ymin is None: ymin = ax.get_ylim()[0] if ymax is None: ymax = ax.get_ylim()[1] ax.set_ylim(ymin, ymax) ax.set_ylabel('Transmission') ax.set_xlabel('$\mathrm{E-E_F}$ $(e\mathrm{V})$') if plus is not None: return ax, tr+plus+yshift else: return ax, tr+yshift def plot_transmission_bulk(H, iE, ymin=None, ymax=None, style='-', color='k', label=None, xshift=0, yshift=0): print('Plotting bulk transmission from elec {} in: {}'.format(iE, H)) H = si.get_sile(H) tr = H.transmission_bulk(H.elecs[iE]) ax = plt.gca() ax.plot(H.E+xshift, tr+yshift, style, color=color, label=label) if ymin is None: ymin = ax.get_ylim()[0] if ymax is None: ymax = ax.get_ylim()[1] ax.set_ylim(ymin, ymax) ax.set_ylabel('Transmission') ax.set_xlabel('$\mathrm{E-E_F}$ $(e\mathrm{V})$') return ax, tr def read_bondcurrents(f, idx_elec, only='+', E=0.0, k='avg'):#, atoms=None): """Read bond currents from tbtrans output Parameters ---------- f : string TBT.nc file idx_elec : int the electrode of originating electrons only : {'+', '-', 'all'} If "+" is supplied only the positive orbital currents are used, for "-", only the negative orbital currents are used, else return the sum of both. E : float or int, A float for energy in eV, int for explicit energy index k : bool, int or array_like whether the returned bond current is k-averaged, an explicit k-point or a selection of k-points Returns ------- bc, nc.E[idx_E], geom bc : bond currents nc.E[idx_E] : energy geom : geometry """ print('Reading: {}'.format(f)) nc = si.get_sile(f) na, na_dev = nc.na, nc.na_dev print('Total number of atoms: {}'.format(na)) print('Number of atoms in the device region: {}'.format(na_dev)) geom = nc.geom elec = nc.elecs[idx_elec] print('Bond-currents from electrode: {}'.format(elec)) # Check 'k' argument if k == 'avg': avg = True elif k == 'Gamma': kpts = nc.kpt idx_gamma = np.where(np.sum(np.abs(kpts), axis=1) == 0.)[0] if (kpts[idx_gamma] != np.zeros((1, 3))).any(axis=1): print('\nThe selected k-point is not Gamma!\n') exit(0) else: print('You have selected the Gamma point!') avg = idx_gamma # Index of Gamma point in nc.kpt else: print('\nInvalid `k` argument: please keep the default `avg` or use `Gamma`!\n') exit(0) idx_E = nc.Eindex(E) print('Extracting bond-currents at energy: {} eV'.format(nc.E[idx_E])) bc = nc.bond_current(elec, kavg=avg, isc=[0,0,0], only=only, E=idx_E, uc=True) return bc, nc.E[idx_E], geom # bc_coo = nc.bond_current(elec, kavg=avg, isc=[0,0,0], only=only, E=idx_E, uc=True).tocoo() # i_list = bc_coo.row # j_list = bc_coo.col # bc_list = bc_coo.data # #for i, j, bc in zip(i_list, j_list, bc_list): # # print('{}\t{}\t{}'.format(i, j, bc)) # print('Number of bond-current entries: {}'.format(np.shape(bc_list))) # if atoms is not None: # i_list_new, j_list_new, bc_list_new = [], [], [] # for i, j, bc in zip(i_list, j_list, bc_list): # if i in atoms and j in atoms: # i_list_new.append(i) # j_list_new.append(j) # bc_list_new.append(bc) # i_list = np.array(i_list_new) # j_list = np.array(j_list_new) # bc_list = np.array(bc_list_new) # #print('i\tj\tBond-current') # #for i, j, bc in zip(i_list, j_list, bc_list): # # print('{}\t{}\t{}'.format(i, j, bc)) # print('MIN bc (from file) = {}'.format(np.min(bc_list))) # print('MAX bc (from file) = {}'.format(np.max(bc_list))) # return (geom, i_list, j_list, bc_list, nc.E[idx_E]) def bc_sub(bc, atoms): """ bc: bondcurrents object directly from "read_bondcurrent" atoms: list of selected atoms """ # Get data i_list, j_list, bc_list = bc.tocoo().row, bc.tocoo().col, bc.tocoo().data # Filter only selected atoms print('Reading bond-currents among atoms (1-based!!!):') print(list2range_TBTblock(atoms)) # print 0-based idx as 1-based idx i_list_new, j_list_new, bc_list_new = [], [], [] for i, j, bc in zip(i_list, j_list, bc_list): if i in atoms and j in atoms: i_list_new.append(i) j_list_new.append(j) bc_list_new.append(bc) return np.array(i_list_new), np.array(j_list_new), np.array(bc_list_new) class Groupby: def __init__(self, keys): _, self.keys_as_int = np.unique(keys, return_inverse = True) self.n_keys = max(self.keys_as_int) self.set_indices() def set_indices(self): self.indices = [[] for i in range(self.n_keys+1)] for i, k in enumerate(self.keys_as_int): self.indices[k].append(i) self.indices = [np.array(elt) for elt in self.indices] def apply(self, function, vector, broadcast): if broadcast: result = np.zeros(len(vector)) for idx in self.indices: result[idx] = function(vector[idx]) else: result = np.zeros(self.n_keys) for k, idx in enumerate(self.indices): result[self.keys_as_int[k]] = function(vector[idx]) return result def plot_bondcurrents(f, idx_elec, only='+', E=0.0, k='avg', zaxis=2, avg=True, scale='raw', xyz_origin=None, vmin=None, vmax=None, lw=5, log=False, adosmap=False, ADOSmin=None, ADOSmax=None, arrows=False, lattice=False, ps=20, ados=False, atoms=None, out=None, ymin=None, ymax=None, xmin=None, xmax=None, spsite=None, dpi=180, units='angstrom'): """ Read bond currents from tbtrans output and plot them Parameters ---------- f : string TBT.nc file idx_elec : int the electrode of originating electrons only : {'+', '-', 'all'} If "+" is supplied only the positive orbital currents are used, for "-", only the negative orbital currents are used, else return the sum of both. E : float or int, A float for energy in eV, int for explicit energy index k : bool, int or array_like whether the returned bond current is k-averaged, an explicit k-point or a selection of k-points zaxis : int index of out-of plane direction avg : bool if "True", then it averages all currents coming from each atom and plots them in a homogeneous map if "False" it plots ALL bond currents as lines originating from each atom scale : {'%' or 'raw'} wheter values are percent. Change vmin and vmax accordingly between 0% and 100% vmin : float min value in colormap. All data greater than this will be blue vmax : float max value in colormap. All data greater than this will be yellow lattice : bool whether you want xy coord of atoms plotted as black dots in the figure ps : float size of these dots spsite : list of int special atoms in the lattice that you want to plot as red dots instead atoms : np.array or list list of atoms for which reading and plotting bondcurrents out : string name of final png figure ..... Returns ------- bc, nc.E[idx_E], geom bc : bond currents nc.E[idx_E] : energy geom : geometry Notes ----- - atoms must be 0-based - Be sure that atoms belong to a single plane (say, only graphene, no tip) """ t = time.time() print('\n***** BOND-CURRENTS (2D map) *****\n') nc = si.get_sile(f) elec = nc.elecs[idx_elec] # Read bond currents from TBT.nc file bc, energy, geom = read_bondcurrents(f, idx_elec, only, E, k) # If needed, select only selected atoms from bc_bg. bc_coo = bc.tocoo() i_list, j_list, bc_list = bc_coo.row, bc_coo.col, bc_coo.data if atoms is None: print('Reading bond-currents among all atoms in device region') atoms = nc.a_dev del bc_coo else: # Only choose atoms with positive indices atoms = atoms[atoms >= 0] select = np.logical_and(np.in1d(i_list, atoms), np.in1d(j_list, atoms)) i_list, j_list, bc_list = i_list[select], j_list[select], bc_list[select] del bc_coo, select print('Number of bond-current entries: {}'.format(np.shape(bc_list))) print('MIN bc among selected atoms (from file) = {}'.format(np.min(bc_list))) print('MAX bc among selected atoms (from file) = {}'.format(np.max(bc_list))) #print('i\tj\tBond-current') #for i, j, bc in zip(i_list, j_list, bc_list): # print('{}\t{}\t{}'.format(i, j, bc)) # Plot import matplotlib.collections as collections from matplotlib.colors import LogNorm from mpl_toolkits.axes_grid1 import make_axes_locatable cmap = cm.viridis if out is None: figname = 'BondCurrents_{}_E{}.png'.format(elec, energy) else: figname = '{}_{}_E{}.png'.format(out, elec, energy) fig, ax = plt.subplots() ax.set_aspect('equal') if log: bc_list = np.log(bc_list+1) norm = LogNorm() else: norm=None if zaxis == 2: xaxis, yaxis = 0, 1 elif zaxis == 0: xaxis, yaxis = 1, 2 elif zaxis == 1: xaxis, yaxis = 0, 2 if avg: # Plot bond currents as avg 2D map atoms_sort =
np.sort(atoms)
numpy.sort
#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Created on Tue Jun 25 16:41:10 2019 Exploring the root file containing the data. @author: misiak """ import uproot import numpy as np import matplotlib.pyplot as plt from read_data import file_path num_array = np.arange(3) energy_of = list() chi2_of = list() for num in num_array: fp = file_path(num) root = uproot.open(fp) # tree_run = root["RunTree_Normal"] # print(tree_run['Polar_Ion'].array()) # tree_event_trig_raw = root["EventTree_trig_Normal_raw"] tree_event_trig_filt = root["EventTree_trig_Normal_filt"] tree_event_trig_filt_decor = root["EventTree_trig_Normal_filt_decor"] # tree_event_noise_raw = root["EventTree_noise_Normal_raw"] # tree_event_noise_filt = root["EventTree_noise_Normal_filt"] # tree_event_noise_filt_decor = root["EventTree_noise_Normal_filt_decor"] energy_of.append(tree_event_trig_filt['Energy_OF'].array()) chi2_of.append(tree_event_trig_filt['chi2_OF'].array()) energy = np.concatenate(energy_of) chi2 = np.concatenate(chi2_of) energy_chal = energy[:,0].T #keeping only chalA energy_ion = energy[:,2:].T chi2_chal = chi2[:, 0].T #keeping only chalA chi2_ion = chi2[:, 2:].T ###PLOT + CUTS plt.close('all') # ============================================================================= # CHI2 CUT # ============================================================================= chi2_thresh = 300 chi2_cut_cond = chi2_chal<chi2_thresh ind_chi2_cut = np.where(chi2_cut_cond)[0] energy_chal_ok = energy_chal[ind_chi2_cut] chi2_chal_ok = chi2_chal[ind_chi2_cut] ### PLOT Chi2 vs Amp fig = plt.figure(figsize=(7,5), num='Chal Chi2 vs Amp') ax = fig.subplots() ax.set_title('ChalA') ax.set_ylabel('Chi2') ax.set_xlabel('Energy [ADU]') ax.loglog(energy_chal, chi2_chal, ls='none', marker='+', color='r', alpha=0.5) ax.loglog(energy_chal_ok, chi2_chal_ok, ls='none', marker='+', color='b') ax.grid(True) ax.axhline(chi2_thresh, color='k') fig.tight_layout() ## ============================================================================= ## Chi2 Histogramm ## ============================================================================= bin_edges = np.histogram_bin_edges(chi2_chal_ok, bins=60) bin_array = bin_edges[1:] - (bin_edges[1]-bin_edges[0])/2 hist_chi2, _ = np.histogram(chi2_chal_ok, bins=bin_edges) chi2_chal_sorted =
np.sort(chi2_chal_ok, axis=0)
numpy.sort
""" File name: patch_extraction.py Author: <NAME> Date created: 11/09/2020 This file is partially refered to https://github.com/prediction2020/unet-vessel-segmentation """ import os import sys import numpy as np import nibabel as nib import argparse # Specify the what patches to be extracted (you may sample more in a training case image) parser = argparse.ArgumentParser() parser.add_argument('--flag', default='train', type=str, help='train or val') opt=parser.parse_args() flag=opt.flag config = dict() config['patch_size'] = (128,128,16) config['train_patch'] = 100 config['val_patch'] = 60 config['vessel_focus']=0.6 config['data_path']='/PATH_TO_DATASET/' #SPECIFY THE PATH HERE config['save_path']='../Data/' if flag=='train': with open('./'+'train'+'_ls.txt') as fp: #SPECIFY THE PATH HERE line=fp.readlines() ls_ori=['Normal-' + x.strip() for x in line] nr_patches=config['train_patch'] nr_vessel_patches = int(nr_patches * config['vessel_focus']) nr_empty_patches = nr_patches - nr_vessel_patches if flag=='val': with open('./'+'val'+'_ls.txt') as fp: #SPECIFY THE PATH HERE line=fp.readlines() ls_ori=['Normal-' + x.strip() for x in line] nr_patches=config['val_patch'] nr_vessel_patches = int(nr_patches * config['vessel_focus']) nr_empty_patches = nr_patches - nr_vessel_patches for case in ls_ori: # load image, mask and label from nifti file print('> Loading image...') img_mat = nib.load(config['data_path'] + case + '/brain.nii').get_fdata() print('> Loading mask...') mask_mat = nib.load(config['data_path'] + case + '/mask.nii').get_fdata() print('> Loading label...') label_mat = nib.load(config['data_path'] + case + '/vessel.nii').get_fdata() current_nr_extracted_patches = 0 # counts already extracted patches img_patches = [] # list to save image patches label_patches = [] # list to save label patches mip_patches=[] # list to save mip patches arg_patches=[] # list to save index info mipgt_patches=[] # list to save mip label patches # variables with sizes and ranges for searchable areas max_patch_size = config['patch_size'] half_max_size_x = max_patch_size[0] // 2 half_max_size_y = max_patch_size[1] // 2 half_max_size_z = max_patch_size[2] // 2 max_row = label_mat.shape[0] - half_max_size_x max_col = label_mat.shape[1] - half_max_size_y max_chn = label_mat.shape[2] - half_max_size_z # ----------------------------------------------------------- # EXTRACT RANDOM PATCHES WITH VESSELS IN THE CENTER OF EACH PATCH # ----------------------------------------------------------- searchable_label_area = label_mat[half_max_size_x: max_row, half_max_size_y: max_col, half_max_size_z:max_chn] # find all vessel voxel indices in searchable area vessel_inds = np.asarray(np.where(searchable_label_area == 1)) while current_nr_extracted_patches < nr_vessel_patches: # find given number of random vessel indices random_vessel_inds = vessel_inds[:, np.random.choice(vessel_inds.shape[1], nr_vessel_patches, replace=False)] for i in range(nr_vessel_patches): # stop extracting if the desired number of patches has been reached if current_nr_extracted_patches == nr_vessel_patches: break # get the coordinates of the random vessel around which the patch will be extracted x = random_vessel_inds[0][i] + half_max_size_x y = random_vessel_inds[1][i] + half_max_size_y z = random_vessel_inds[2][i] + half_max_size_z cnt=0 lvl=5 #compute 5-sliced MIPs arg_cnt=0 row_blk=3 cln_blk=2 half_size_x=half_max_size_x half_size_y=half_max_size_y half_size_z=half_max_size_z ###3D img patch 128 x 128 x 16 random_img_patch = img_mat[x - half_size_x:x + half_size_x, y - half_size_y:y + half_size_y, z - half_size_z:z + half_size_z] ###3D GT label 128 x 128 x 16 random_label_patch = label_mat[x - half_size_x:x + half_size_x, y - half_size_y:y + half_size_y, z - half_size_z:z + half_size_z] ###2D composited MIP patch 128*3 x 128*2 random_mip_patch = np.zeros((np.size(random_img_patch,0)*row_blk,
np.size(random_img_patch,1)
numpy.size
# coding: utf-8 # Copyright (c) 2020 The MITRE Corporation. """ Estimator module to train/fit/estimate individual models with fixed hyperparameters. Estimators are used by trainers to manage training with specific datasets; in addition, the estimator API supports inference/encoding with fitted models. """ import logging import math import logging import time import io import os import psutil import mxnet as mx import numpy as np import scipy.sparse as sp import json from mxnet import autograd from mxnet import gluon import gluonnlp as nlp import umap #import umap.plot import matplotlib.pyplot as plt from sklearn.metrics import average_precision_score, top_k_accuracy_score, roc_auc_score, ndcg_score, f1_score, precision_recall_fscore_support from tmnt.data_loading import DataIterLoader, SparseMatrixDataIter from tmnt.modeling import BowVAEModel, CovariateBowVAEModel, SeqBowVED from tmnt.modeling import GeneralizedSDMLLoss, MetricSeqBowVED from tmnt.eval_npmi import EvaluateNPMI from tmnt.distribution import HyperSphericalDistribution, LogisticGaussianDistribution, BaseDistribution, GaussianDistribution import autogluon.core as ag from itertools import cycle from typing import List, Tuple, Dict, Optional, Union, NoReturn MAX_DESIGN_MATRIX = 250000000 def multilabel_pr_fn(cutoff, recall=False): def get_recall_or_precision(yvec, pvec): prec, rec, _, support = precision_recall_fscore_support(yvec, pvec, zero_division=0, average='samples') if recall: return rec else: return prec def multilabel_recall_fn_x(label, pred): num_labels = label[0].shape[0] pred_decision = np.where(pred >= cutoff, 1.0, 0.0) w_sum = get_recall_or_precision(label, pred_decision) return w_sum, label.shape[0] return multilabel_recall_fn_x def get_composite_p_and_r_metric(): metrics = mx.metric.CompositeEvalMetric() prec_metric = mx.metric.CustomMetric(feval=multilabel_pr_fn(0.5, recall=False)) rec_metric = mx.metric.CustomMetric(feval=multilabel_pr_fn(0.5, recall=True)) metrics.add(prec_metric) metrics.add(rec_metric) return metrics class BaseEstimator(object): """Base class for all VAE-based estimators. Parameters: log_method: Method for logging. 'print' | 'log', optional (default='log') quiet: Flag for whether to force minimal logging/ouput. optional (default=False) coherence_coefficient: Weight to tradeoff influence of coherence vs perplexity in model selection objective (default = 8.0) reporter: Callback reporter to include information for model selection via AutoGluon ctx: MXNet context for the estimator latent_distribution: Latent distribution of the variational autoencoder - defaults to LogisticGaussian with 20 dimensions optimizer: MXNet optimizer (default = "adam") lr: Learning rate of training. (default=0.005) coherence_reg_penalty: Regularization penalty for topic coherence. optional (default=0.0) redundancy_reg_penalty: Regularization penalty for topic redundancy. optional (default=0.0) batch_size: Batch training size. optional (default=128) epochs : Number of training epochs. optional(default=40) coherence_via_encoder: Flag to use encoder to derive coherence scores (via gradient attribution) pretrained_param_file: Path to pre-trained parameter file to initialize weights warm_start: Subsequent calls to `fit` will use existing model weights rather than reinitializing """ def __init__(self, log_method: str = 'log', quiet: bool = False, coherence_coefficient: float = 8.0, reporter: Optional[object] = None, ctx: Optional[mx.context.Context] = mx.cpu(), latent_distribution: Optional[BaseDistribution] = None, optimizer: str = "adam", lr: float = 0.005, coherence_reg_penalty: float = 0.0, redundancy_reg_penalty: float = 0.0, batch_size: int = 128, epochs: int = 40, coherence_via_encoder: bool = False, pretrained_param_file: Optional[str] = None, warm_start: bool = False): self.log_method = log_method self.quiet = quiet self.model = None self.coherence_coefficient = coherence_coefficient self.reporter = reporter self.ctx = ctx self.latent_distribution = latent_distribution or LogisticGaussianDistribution(20) self.optimizer = optimizer self.lr = lr self.n_latent = self.latent_distribution.n_latent self.coherence_reg_penalty = coherence_reg_penalty self.redundancy_reg_penalty = redundancy_reg_penalty self.batch_size = batch_size self.epochs = epochs self.coherence_via_encoder = coherence_via_encoder self.pretrained_param_file = pretrained_param_file self.warm_start = warm_start self.num_val_words = -1 ## will be set later for computing Perplexity on validation dataset self.latent_distribution.ctx = self.ctx def _np_one_hot(self, vec, n_outputs): ovec = np.zeros((vec.size, n_outputs)) ovec[np.arange(vec.size), vec.astype('int32')] = 1.0 return ovec def _output_status(self, status_string): if self.log_method == 'print': print(status_string) elif self.log_method == 'log': logging.info(status_string) def get_topic_vectors(self): raise NotImplementedError() def _get_model(self): """ Returns: (:class:`mxnet.gluon.HybridBlock`): MXNet model initialized using provided hyperparameters """ raise NotImplementedError() def _npmi(self, X, k=10): """ Calculate NPMI(Normalized Pointwise Mutual Information) for data X Parameters: X (array-like or sparse matrix): Document word matrix. shape [n_samples, vocab_size] k (int): Threshold at which to compute npmi. optional (default=10) Returns: npmi (float): NPMI score. """ sorted_ids = self.model.get_ordered_terms() num_topics = min(self.n_latent, sorted_ids.shape[-1]) top_k_words_per_topic = [[int(i) for i in list(sorted_ids[:k, t])] for t in range(self.n_latent)] npmi_eval = EvaluateNPMI(top_k_words_per_topic) npmi = npmi_eval.evaluate_csr_mat(X) unique_term_ids = set() unique_limit = 5 ## only consider the top 5 terms for each topic when looking at degree of redundancy for i in range(num_topics): topic_ids = list(top_k_words_per_topic[i][:unique_limit]) for j in range(len(topic_ids)): unique_term_ids.add(topic_ids[j]) redundancy = (1.0 - (float(len(unique_term_ids)) / num_topics / unique_limit)) ** 2 return npmi, redundancy def _get_objective_from_validation_result(self, val_result): """ Get the final objective value from the various validation metrics. Parameters: val_result (dict): Dictionary of validation metrics calculated. """ raise NotImplementedError() def fit(self, X: sp.csr.csr_matrix, y: np.ndarray) -> NoReturn: """ Fit VAE model according to the given training data X with optional co-variates y. Parameters: X: representing input data y: representing covariate/labels associated with data elements """ raise NotImplementedError() def fit_with_validation(self, X: sp.csr.csr_matrix, y: np.ndarray, val_X: sp.csr.csr_matrix, val_Y: np.ndarray) -> NoReturn: """ Fit VAE model according to the given training data X with optional co-variates y; validate (potentially each epoch) with validation data val_X and optional co-variates val_Y Parameters: X: representing training data y: representing covariate/labels associated with data elements in training data val_X: representing validation data val_y: representing covariate/labels associated with data elements in validation data """ raise NotImplementedError() class BaseBowEstimator(BaseEstimator): """ Bag of words variational autoencoder algorithm Parameters: vocabulary (:class:`gluonnlp.Vocab`): GluonNLP Vocabulary object n_labels: Number of possible labels/classes when provided supervised data gamma: Coefficient that controls how supervised and unsupervised losses are weighted against each other enc_hidden_dim (int): Size of hidden encoder layers. optional (default=150) embedding_source (str): Word embedding source for vocabulary. 'random' | 'glove' | 'fasttext' | 'word2vec', optional (default='random') embedding_size (int): Word embedding size, ignored if embedding_source not 'random'. optional (default=128) fixed_embedding (bool): Enable fixed embeddings. optional(default=False) num_enc_layers: Number of layers in encoder. optional(default=1) enc_dr: Dropout probability in encoder. optional(default=0.1) coherence_via_encoder: Flag validate_each_epoch: Perform validation of model against heldout validation data after each training epoch multilabel: Assume labels are vectors denoting label sets associated with each document """ def __init__(self, vocabulary: nlp.Vocab, n_labels: int = 0, gamma: float = 1.0, multilabel: bool = False, validate_each_epoch: bool = False, enc_hidden_dim: int = 150, embedding_source: str = "random", embedding_size: int = 128, fixed_embedding: bool = False, num_enc_layers: int = 1, enc_dr: float = 0.1, classifier_dropout: float = 0.1, *args, **kwargs): super().__init__(*args, **kwargs) self.enc_hidden_dim = enc_hidden_dim self.fixed_embedding = fixed_embedding self.n_encoding_layers = num_enc_layers self.enc_dr = enc_dr self.classifier_dropout = classifier_dropout self.vocabulary = vocabulary self.embedding_source = embedding_source self.embedding_size = embedding_size self.validate_each_epoch = validate_each_epoch self.multilabel = multilabel self.gamma = gamma self.n_labels = n_labels self.has_classifier = n_labels > 1 self.loss_function = gluon.loss.SigmoidBCELoss() if multilabel else gluon.loss.SoftmaxCELoss() @classmethod def from_saved(cls, model_dir: str) -> 'BaseBowEstimator': """ Instantiate a BaseBowEstimator object from a saved model Parameters: model_dir: String representing the path to the saved model directory Returns: BaseBowEstimator object """ return cls.from_config(config = model_dir+'/model.config', vocabulary = model_dir+'/vocab.json', pretrained_param_file = model_dir+'/model.params') @classmethod def from_config(cls, config: Union[str, dict], vocabulary: Union[str, nlp.Vocab], n_labels: int = 0, coherence_coefficient: float = 8.0, coherence_via_encoder: bool = False, validate_each_epoch: bool = False, pretrained_param_file: Optional[str] = None, reporter: Optional[object] = None, ctx: mx.context.Context = mx.cpu()) -> 'BaseBowEstimator': """ Create an estimator from a configuration file/object rather than by keyword arguments Parameters: config: Path to a json representation of a configuation or TMNT config dictionary vocabulary: Path to a json representation of a vocabulary or GluonNLP vocabulary object pretrained_param_file: Path to pretrained parameter file if using pretrained model reporter: Callback reporter to include information for model selection via AutoGluon ctx: MXNet context for the estimator Returns: An estimator for training and evaluation of a single model """ if isinstance(config, str): try: with open(config, 'r') as f: config_dict = json.load(f) except: logging.error("File {} does not appear to be a valid config instance".format(config)) raise Exception("Invalid Json Configuration File") config = ag.space.Dict(**config_dict) if isinstance(vocabulary, str): try: with open(vocabulary, 'r') as f: voc_js = f.read() except: logging.error("File {} does not appear to be a valid vocabulary file".format(vocabulary)) raise Exception("Invalid Json Configuration File") vocabulary = nlp.Vocab.from_json(voc_js) if vocabulary.embedding is not None: emb_size = vocabulary.embedding.idx_to_vec[0].size else: emb_size = config.embedding.get('size') if not emb_size: emb_size = config.derived_info.get('embedding_size') if not emb_size: raise Exception("Embedding size must be provided as the 'size' attribute of 'embedding' or as 'derived_info.embedding_size'") gamma = config.get('gamma', 1.0) multilabel = config.get('multilabel', False) lr = config.lr latent_distrib = config.latent_distribution optimizer = config.optimizer n_latent = int(config.n_latent) enc_hidden_dim = int(config.enc_hidden_dim) coherence_reg_penalty = float(config.coherence_loss_wt) redundancy_reg_penalty = float(config.redundancy_loss_wt) batch_size = int(config.batch_size) embedding_source = config.embedding.source fixed_embedding = config.embedding.get('fixed') == True covar_net_layers = config.covar_net_layers n_encoding_layers = config.num_enc_layers enc_dr = config.enc_dr epochs = int(config.epochs) ldist_def = config.latent_distribution kappa = 0.0 alpha = 1.0 latent_distrib = ldist_def.dist_type if latent_distrib == 'logistic_gaussian': alpha = ldist_def.alpha latent_distribution = LogisticGaussianDistribution(n_latent, ctx=ctx, alpha=alpha) elif latent_distrib == 'vmf': kappa = ldist_def.kappa latent_distribution = HyperSphericalDistribution(n_latent, ctx=ctx, kappa=kappa) else: latent_distribution = GaussianDistribution(n_latent, ctx=ctx) model = \ cls(vocabulary, n_labels=n_labels, gamma = gamma, multilabel = multilabel, validate_each_epoch=validate_each_epoch, coherence_coefficient=coherence_coefficient, reporter=reporter, ctx=ctx, lr=lr, latent_distribution=latent_distribution, optimizer=optimizer, enc_hidden_dim=enc_hidden_dim, coherence_reg_penalty=coherence_reg_penalty, redundancy_reg_penalty=redundancy_reg_penalty, batch_size=batch_size, embedding_source=embedding_source, embedding_size=emb_size, fixed_embedding=fixed_embedding, num_enc_layers=n_encoding_layers, enc_dr=enc_dr, epochs=epochs, log_method='log', coherence_via_encoder=coherence_via_encoder, pretrained_param_file = pretrained_param_file, warm_start = (pretrained_param_file is not None)) return model def _get_config(self): config = {} config['lr'] = self.lr config['enc_hidden_dim'] = self.enc_hidden_dim config['n_latent'] = self.n_latent config['optimizer'] = self.optimizer config['epochs'] = self.epochs config['batch_size'] = self.batch_size config['num_enc_layers'] = self.n_encoding_layers config['enc_dr'] = self.enc_dr config['coherence_loss_wt'] = self.coherence_reg_penalty config['redundancy_loss_wt'] = self.redundancy_reg_penalty config['n_labels'] = self.n_labels config['covar_net_layers'] = 1 if isinstance(self.latent_distribution, HyperSphericalDistribution): config['latent_distribution'] = {'dist_type':'vmf', 'kappa': self.latent_distribution.kappa} elif isinstance(self.latent_distribution, LogisticGaussianDistribution): config['latent_distribution'] = {'dist_type':'logistic_gaussian', 'alpha':self.latent_distribution.alpha} else: config['latent_distribution'] = {'dist_type':'gaussian'} if self.embedding_source != 'random': config['embedding'] = {'source': self.embedding_source} else: config['embedding'] = {'source': 'random', 'size': self.embedding_size} config['derived_info'] = {'embedding_size': self.embedding_size} return config def write_model(self, model_dir): if not os.path.exists(model_dir): os.mkdir(model_dir) pfile = os.path.join(model_dir, 'model.params') sp_file = os.path.join(model_dir, 'model.config') vocab_file = os.path.join(model_dir, 'vocab.json') logging.info("Model parameters, configuration and vocabulary written to {}".format(model_dir)) self.model.save_parameters(pfile) config = self._get_config() specs = json.dumps(config, sort_keys=True, indent=4) with io.open(sp_file, 'w') as fp: fp.write(specs) with io.open(vocab_file, 'w') as fp: fp.write(self.model.vocabulary.to_json()) def _get_wd_freqs(self, X, max_sample_size=1000000): sample_size = min(max_sample_size, X.shape[0]) sums = X.sum(axis=0) return sums def _get_model(self): raise NotImplementedError() def _npmi_with_dataloader(self, dataloader, k=10): sorted_ids = self.model.get_ordered_terms_encoder(dataloader) if self.coherence_via_encoder else self.model.get_ordered_terms() num_topics = min(self.n_latent, sorted_ids.shape[-1]) top_k_words_per_topic = [[int(i) for i in list(sorted_ids[:k, t])] for t in range(self.n_latent)] npmi_eval = EvaluateNPMI(top_k_words_per_topic) npmi = npmi_eval.evaluate_csr_loader(dataloader) unique_term_ids = set() unique_limit = 5 ## only consider the top 5 terms for each topic when looking at degree of redundancy for i in range(num_topics): topic_ids = list(top_k_words_per_topic[i][:unique_limit]) for j in range(len(topic_ids)): unique_term_ids.add(topic_ids[j]) redundancy = (1.0 - (float(len(unique_term_ids)) / num_topics / unique_limit)) ** 2 return npmi, redundancy def _perplexity(self, dataloader, total_words): total_rec_loss = 0 total_kl_loss = 0 last_batch_size = dataloader.last_batch_size num_batches = dataloader.num_batches for i, (data,labels) in enumerate(dataloader): if labels is None: labels = mx.nd.expand_dims(mx.nd.zeros(data.shape[0]), 1) data = data.as_in_context(self.ctx) labels = labels.as_in_context(self.ctx) _, kl_loss, rec_loss, _, _, _ = self._forward(self.model, data, labels) if i == num_batches - 1 and last_batch_size > 0: total_rec_loss += rec_loss[:last_batch_size].sum().asscalar() total_kl_loss += kl_loss[:last_batch_size].sum().asscalar() else: total_rec_loss += rec_loss.sum().asscalar() total_kl_loss += kl_loss.sum().asscalar() if ((total_rec_loss + total_kl_loss) / total_words) < 709.0: perplexity = math.exp((total_rec_loss + total_kl_loss) / total_words) else: perplexity = 1e300 return perplexity def perplexity(self, X, y): dataloader = self._get_val_dataloader(X, y) self.num_val_words = X.sum() return self._perplexity(dataloader, self.num_val_words) def _get_val_dataloader(self, val_X, val_y): test_size = val_X.shape[0] * val_X.shape[1] test_batch_size = min(val_X.shape[0], self.batch_size) last_batch_size = val_X.shape[0] % test_batch_size if test_batch_size < val_X.shape[0] else test_batch_size num_val_batches = val_X.shape[0] // test_batch_size if last_batch_size > 0 and last_batch_size < test_batch_size: num_val_batches += 1 if test_size < MAX_DESIGN_MATRIX: val_X = mx.nd.sparse.csr_matrix(val_X).tostype('default') val_y = mx.nd.array(val_y) if val_y is not None else None val_dataloader = DataIterLoader(mx.io.NDArrayIter(val_X, val_y, test_batch_size, last_batch_handle='pad', shuffle=False), num_batches=num_val_batches, last_batch_size = last_batch_size) else: val_dataloader = DataIterLoader(SparseMatrixDataIter(val_X, val_y, batch_size = test_batch_size, last_batch_handle='pad', shuffle=False), ) return val_dataloader def validate(self, val_X, val_y): val_dataloader = self._get_val_dataloader(val_X, val_y) total_val_words = val_X.sum() if self.num_val_words < 0: self.num_val_words = total_val_words ppl = self._perplexity(val_dataloader, total_val_words) if self.coherence_via_encoder: npmi, redundancy = self._npmi_with_dataloader(val_dataloader) else: n = min(val_X.shape[0], 50000) npmi, redundancy = self._npmi(val_X[:n]) v_res = {'ppl': ppl, 'npmi': npmi, 'redundancy': redundancy} prediction_arrays = [] if self.has_classifier: tot_correct = 0 tot = 0 bs = min(val_X.shape[0], self.batch_size) num_std_batches = val_X.shape[0] // bs last_batch_size = val_X.shape[0] % bs for i, (data, labels) in enumerate(val_dataloader): data = data.as_in_context(self.ctx) labels = labels.as_in_context(self.ctx) if i == num_std_batches - 1 and last_batch_size > 0: data = data[:last_batch_size] labels = labels[:last_batch_size] predictions = self.model.predict(data) predictions_lists = [ p.asnumpy() for p in list(predictions) ] prediction_arrays.extend(predictions_lists) if len(labels.shape) == 1: ## standard single-label classification correct = mx.nd.argmax(predictions, axis=1) == labels tot_correct += mx.nd.sum(correct).asscalar() tot += (data.shape[0] - (labels < 0.0).sum().asscalar()) # subtract off labels < 0 (for unlabeled data) acc = float(tot_correct) / float(tot) v_res['accuracy'] = acc prediction_mat = np.array(prediction_arrays) ap_scores = [] if len(val_y.shape) == 1: val_y = self._np_one_hot(val_y, self.n_labels) for c in range(self.n_labels): y_vec = val_y[:,c] pred_vec = prediction_mat[:,c] if not np.any(np.isnan(pred_vec)): ap_c = average_precision_score(y_vec, pred_vec) else: ap_c = 0.0 ap_scores.append((ap_c, int(y_vec.sum()))) prediction_np_mat = np.array(prediction_arrays) v_res['ap_scores_and_support'] = ap_scores return v_res def initialize_with_pretrained(self): raise NotImplementedError() def _get_objective_from_validation_result(self, val_result): npmi = val_result['npmi'] ppl = val_result['ppl'] redundancy = val_result['redundancy'] obj = (npmi - redundancy) - ( ( ppl / 1000 ) / self.coherence_coefficient ) b_obj = max(min(obj, 100.0), -100.0) sc_obj = 1.0 / (1.0 + math.exp(-b_obj)) if self.has_classifier: orig_obj = sc_obj sc_obj = (sc_obj + self.gamma * val_result['accuracy']) / (1.0 + self.gamma) logging.info("Objective via classifier: {} based on accuracy = {} and topic objective = {}" .format(sc_obj, val_result['accuracy'], orig_obj)) else: logging.info("Pure topic model objective: {} (has classifier = {})".format(sc_obj, self.has_classifier)) return sc_obj def _get_losses(self, model, data, labels): elbo_ls, kl_ls, rec_ls, coherence_loss, red_ls, predicted_labels = \ self._forward(self.model, data, labels) if self.has_classifier: label_ls = self.loss_function(predicted_labels, labels).mean() total_ls = (self.gamma * label_ls) + elbo_ls.mean() else: total_ls = elbo_ls.mean() label_ls = mx.nd.zeros(total_ls.shape) return elbo_ls, kl_ls, rec_ls, red_ls, label_ls, total_ls def fit_with_validation_aux(self, X: sp.csr.csr_matrix, y: np.ndarray, val_X: Optional[sp.csr.csr_matrix], val_y: Optional[np.ndarray], aux_X: Optional[sp.csr.csr_matrix] = None) -> Tuple[float, float, float, float]: wd_freqs = self._get_wd_freqs(X) x_size = X.shape[0] * X.shape[1] if x_size > MAX_DESIGN_MATRIX: logging.info("Sparse matrix has total size = {}. Using Sparse Matrix data batcher.".format(x_size)) train_dataloader = \ DataIterLoader(SparseMatrixDataIter(X, y, batch_size = self.batch_size, last_batch_handle='discard', shuffle=True)) else: y = mx.nd.array(y) if y is not None else None X = mx.nd.sparse.csr_matrix(X) train_dataloader = DataIterLoader(mx.io.NDArrayIter(X, y, self.batch_size, last_batch_handle='discard', shuffle=True)) if aux_X is not None: aux_dataloader = \ DataIterLoader(SparseMatrixDataIter(X, None, batch_size = self.batch_size, last_batch_handle='discard', shuffle=True)) if self.model is None or not self.warm_start: self.model = self._get_model() self.model.initialize_bias_terms(mx.nd.array(wd_freqs).squeeze()) ## initialize bias weights to log frequencies trainer = gluon.Trainer(self.model.collect_params(), self.optimizer, {'learning_rate': self.lr}) sc_obj, npmi, ppl, redundancy = 0.0, 0.0, 0.0, 0.0 v_res = None for epoch in range(self.epochs): ts_epoch = time.time() elbo_losses = [] lab_losses = [] for i, (data, labels) in enumerate(train_dataloader): if labels is None: labels = mx.nd.expand_dims(mx.nd.zeros(data.shape[0]), 1) labels = labels.as_in_context(self.ctx) data = data.as_in_context(self.ctx) with autograd.record(): elbo_ls, kl_loss, _, _, lab_loss, total_ls = self._get_losses(self.model, data, labels) elbo_mean = elbo_ls.mean() total_ls.backward() trainer.step(1) if not self.quiet: elbo_losses.append(float(elbo_mean.asscalar())) if lab_loss is not None: lab_losses.append(float(lab_loss.mean().asscalar())) if not self.quiet and not self.validate_each_epoch: elbo_mean =
np.mean(elbo_losses)
numpy.mean
# -*- coding: UTF-8 -*- from ZUI_MDP_solution import * from unittest import TestCase import itertools as it import numpy as np import numpy.testing as nptest # Taken from http://www.neuraldump.net/2017/06/how-to-suppress-python-unittest-warnings/. def ignore_warnings(test_func): def do_test(self, *args, **kwargs): with warnings.catch_warnings(): warnings.simplefilter("ignore") test_func(self, *args, **kwargs) return do_test class TestGridWorld2x2(TestCase): rtol = 1e-4 # relative tolerance for comparing two floats def setUp(self): self.gw = GridWorld.get_world('2x2') def test_is_obstacle_at(self): self.assertFalse(self.gw._is_obstacle([0, 0])) self.assertFalse(self.gw._is_obstacle([0, 1])) self.assertFalse(self.gw._is_obstacle([1, 0])) self.assertFalse(self.gw._is_obstacle([1, 1])) def test_is_on_grid_true(self): self.assertTrue(self.gw._is_on_grid([0, 0]),msg='The point [{},{}] should be on the grid.'.format(0, 0)) self.assertTrue(self.gw._is_on_grid([1, 1]), msg='The point [{},{}] should be on the grid.'.format(1, 1)) def test_is_on_grid_false(self): for point in ([-1,0], [-2,-2], [2,0], [0,2], [5,5], [0,-1]): self.assertFalse(self.gw._is_on_grid(point),msg='The point [{}] should not be on the grid.'.format(point)) def test_transition_proba(self): true_transition_proba =
np.load('./test_data/test_gw_2x2_transition_proba.npy')
numpy.load
# Wilson Disease Machine Learning #### # WD Blood Neurologic vs Hepatic # coding: utf-8 ## Import python packages import pandas as pd import numpy as np import sklearn from sklearn.model_selection import LeaveOneOut from sklearn import preprocessing from matplotlib import pyplot as plt get_ipython().run_line_magic('matplotlib', 'inline') # training set # load methylation data for each DMRs at each sample in training set A = pd.read_csv("WDN_vs_WDH_Blood_Training_Sample_Methylation.csv") # load training set diagnosis data B = pd.read_csv("WDN_vs_WDH_Training_Samples.csv") # testing set # load methylation data for each DMRs at each sample in testing set C = pd.read_csv("WDN_vs_WDH_Blood_Test_Sample_Methylation.csv") # load testing set diagnosis data D = pd.read_csv("WDN_vs_WDH_Test_Samples.csv") # process data # Input Neurologic as 0 and Hepatic as 1 n_tr = 40 n_te = 10 m = len(A) X_tr = np.zeros((n_tr,m)) y_tr = np.zeros(n_tr) dat_tr = np.array(A) for k in range(n_tr): X_tr[k,:] = dat_tr[:,k+3] for k in range(n_tr): y_tr[k] = (B.WD_Phenotype[k] == 'Hepatic') X_train = X_tr y_train = y_tr X_test = np.zeros((n_te,m)) y_test = np.zeros(n_te) dat_te = np.array(C) for k in range(n_te): X_test[k,:] = dat_te[:,k+3] for k in range(n_te): y_test[k] = (D.WD_Phenotype[k] == 'Hepatic') # AdaBoost from sklearn.ensemble import AdaBoostClassifier from sklearn.tree import DecisionTreeClassifier adb = AdaBoostClassifier() adb.fit(X_train,y_train) adb_pred = adb.predict(X_test) adb_prob = adb.predict_proba(X_test) # precision 1 - np.linalg.norm(adb_pred - y_test, 0) / len(y_test) # list the testing group diagnosis value y_test # list the predicted diagnosis value by AdaBoost adb_pred # list the AdaBoost predicted value probability adb_prob[:,1] # feature selection on AdaBoost model feature = np.array(adb.feature_importances_) plt.plot(adb.feature_importances_) plt.show() # plot the feature selection value from matplotlib import pyplot as plt import matplotlib import matplotlib.pyplot as plt matplotlib.rc('xtick', labelsize=18) matplotlib.rc('ytick', labelsize=18) feature = np.array(adb.feature_importances_) fig = plt.plot(adb.feature_importances_) plt.xlabel('DMRs', fontsize=18) plt.ylabel('Feature Importance', fontsize=18) fig_size = plt.rcParams["figure.figsize"] plt.rcParams["figure.figsize"] = fig_size fig_size[0] = 12 fig_size[1] = 6 plt.text(1000, 0.05, "Precision = 0.9", fontsize=22,ha='left', wrap=True) plt.savefig('Figure 7A.png', figsize=(12, 6),dpi=800) ## select the none zero ## use ind to select out those vriables ind = np.where(feature != 0)[0] A.loc[ind,:] ## Save the selected 44 DMRs in new variables, sel sel = A.loc[ind,:] np.array(sel) import pandas as pd df = pd.DataFrame(sel) df.to_csv("Selected_DMR.csv") ## Use the new set of DMRs to see how to the new model's precision # Redo processing data n_tr = 40 n_te = 10 m = len(ind) X_tr =
np.zeros((n_tr,m))
numpy.zeros
# -*- coding: utf-8 -*- """ @author: <NAME>, University of Bristol, <EMAIL> This programme will take an input array of peaks in 1D I vs q data (such as those returned from the finder programme), and returns a dictionary of possible phases that the data can take on, along with the miller plane index and the peaks used to for that possible phase assignment. There are separate (but almost identical) methods for distinguishing cubic phases and Lamellar/Inverse Hexagonal ones. It is recommended that having used the peak finding programme, the phase is attempted to be assigned by using the number of peaks found in the data. In general from the author's experience, the La and HII phases produce fewer Bragg peaks, such that if a condition were used along the lines of if len(peaks)<3: La_HII_possible_phases(peaks, etc) else: Q_possible_phases(peaks etc) then there should be a good chance of assigning the correct phase. Otherwise there is a risk of simultaneously assigning the HII along with a cubic one. Worst comes to worst... The old fashioned hand method won't fail... The information passed to the dictionary at the end should be enough to plot I vs q data with information about which peak has been indexed as which, along with information about the lattice parameter and phase. See the optional plot in the finder.py programme for more of an idea about the kind of way that matplotlib can plot something like this, using a combination of plt.axvline and plt.text. At the bottom of this programme there is an example set of data in a comment that can be run through to see what result to expect at the end. """ import numpy as np """ La_HII_possible_phases works similarly to Q_possible_phases, in that it uses a statistical methodology to work out which peaks can be assigned to which phase. However, as fewer peaks are expected to be passed to this module, it simply determines the phase by finding a consistent lattice parameter, and taking the longest assignment from La or HII given to it. La_HII_possible_phases will return a dictionary keyed by phase name, with values of lattice parameter, hkl plane factors, and the peaks correspondingly assigned. pass the following parameters to this function: peaks - an array of peaks that have previously been found elsewhere """ def La_HII_possible_phases(peaks): La_ratios=np.array([1,2,3])[:,np.newaxis] HII_ratios=np.sqrt(np.array([1,3,4])[:,np.newaxis]) La_init = 2*np.pi*(1/peaks)*La_ratios HII_init = (2/np.sqrt(3))*2*np.pi*(1/peaks)*HII_ratios La=np.ndarray.flatten(La_init) HII=np.ndarray.flatten(HII_init) values=np.concatenate((La,HII)) hist,bin_edges=np.histogram(values,bins=2*np.size(values)) inds=np.digitize(values,bin_edges)-1 hist_max_bin_pos=np.where(inds==np.argmax(hist))[0] La_sourced=hist_max_bin_pos[np.where(hist_max_bin_pos<len(La))] HII_sourced=hist_max_bin_pos[np.where(hist_max_bin_pos>len(La)-1)] n=np.reshape(np.arange(0,np.size(La_init)),np.shape(La_init)) La_peaks=np.zeros(0) La_factors=np.zeros(0) HII_peaks=np.zeros(0) HII_factors=
np.zeros(0)
numpy.zeros
import sys import os sys.path.insert(0, os.path.abspath('..\\diffpy')) import numpy as np import pandas as pd from scipy.optimize import curve_fit from scipy.ndimage.interpolation import rotate from scipy.spatial import ConvexHull import msds as msds def anomalous(x, D, alpha, dt): # The anomalous diffusion model return 4*D*(x*dt)**alpha def anomModels(MSD, dt, skips=1): # Calculates the anomalous diffusion model parameters for a single particle # from its MSD profile over multiple timespans # By default, fits the model to all possible MSD profiles of at least 10 frames def anom(x, D, alpha): return anomalous(x, D, alpha, dt=dt) steps = MSD.shape[0] + 1 N = np.linspace(1, steps-1, steps-1) alphas = np.zeros(steps-1) Ds = np.zeros(steps-1) for i in range(10, steps-1, skips): ps, _ = curve_fit(anom, N[:i], MSD[:i], p0=[6,1]) Ds[i] = ps[0] alphas[i] = ps[1] return Ds, alphas def anomModel(MSD, dt, frame=100): # Calculates the anomalous diffusion model parameters for multiple # particle trajectories. The user specifies up to which frame to include # in the MSD trajectory to use in the model fit. def anom(x, D, alpha): return anomalous(x, D, alpha, dt=dt) steps = MSD.shape[0] + 1 N = np.linspace(1, steps-1, steps-1) ps, _ = curve_fit(anom, N[:frame], MSD[:frame], p0=[6,1]) D = ps[0] alpha = ps[1] return D, alpha def anomModelN(MSD, dt, frame=100): # Calculate the anomalous diffusion model parameters for multiple particle # trajectories. def anom(x, D, alpha): return anomalous(x, D, alpha, dt=dt) steps, N = MSD.shape n = np.linspace(1, steps, steps) # For arrays that contain NaNs mask = MSD > -10000 cutoff = steps*np.average(mask, axis=0) Ds = np.zeros(N) alphas = np.zeros(N) for i in range(N): cut = int(cutoff[i]) if cut < frame: frame = cut ps, _ = curve_fit(anom, n[:frame], MSD[:frame, i], p0=[6,1]) Ds[i] = ps[0] alphas[i] = ps[1] return Ds, alphas def anomModelsN(MSD, dt, skips=1): # Calculate the anomalous diffusion model parameters for multiple particle # trajectories over multiple MSD window frames. def anom(x, D, alpha): return anomalous(x, D, alpha, dt=dt) steps, N = MSD.shape n = np.linspace(1, steps, steps) # For arrays that contain NaNs mask = MSD > -10000 cutoff = steps*np.average(mask, axis=0) Ds = np.zeros((steps, N)) alphas = np.zeros((steps, N)) for i in range(N): for frame in range(10, steps, skips): cut = int(cutoff[i]) if cut < frame: frame = cut ps, _ = curve_fit(anom, n[:frame], MSD[:frame, i], p0=[6,1]) Ds[frame, i] = ps[0] alphas[frame, i] = ps[1] return Ds, alphas def asym(x, y): # Calculates three asymmetry features based on the eigenvectors # of the radius of gyration tensor for a single trajectory # Calculuates the eigenvalues of the radius of gyration tensor # This tensor is just the covariance matrix of the x, y coordinates n = x.shape[0] # Modified n for trajectories that have NaNs mask = x > -10000 n = n*np.average(mask) x, y = x[:int(n)], y[:int(n)] eigs, vecs = np.linalg.eig(np.cov(x, y)) a1 = (eigs[0]**2 - eigs[1]**2)**2/(eigs[0]**2 + eigs[1]**2)**2 a2 = min(eigs)/max(eigs) a3 = -np.log(1 - 0.5*(eigs[0] - eigs[1])**2/(eigs[0] + eigs[1])**2) # kurtosis, which requires the eigenvectors xi, yi = x.reshape((-1,1)), y.reshape((-1,1)) xy = np.concatenate((xi, yi), axis=1) xp = np.dot(xy, vecs[:,0]) K = np.sum((xp - np.mean(xp))**4/np.std(xp)**4)/n return [a1, a2, a3], eigs, vecs, K def asyms(x, y): steps, N = x.shape a1, a2, a3, Ks = np.zeros(N), np.zeros(N), np.zeros(N), np.zeros(N) for i in range(N): a123, eigs, vecs, Ks[i] = asym(x[:, i], y[:, i]) a1[i], a2[i], a3[i] = a123[0], a123[1], a123[2] return a1, a2, a3, Ks def minBoundRect(x, y): """ Find the smallest bounding rectangle for a set of points. Returns a set of points representing the corners of the bounding box. :param points: an nx2 matrix of coordinates :rval: an nx2 matrix of coordinates """ n = x.shape[0] # Modified n for trajectories that have NaNs mask = x > -10000 n = n*np.average(mask) x, y = x[:int(n)], y[:int(n)] points = np.concatenate((x.reshape((-1, 1)), y.reshape((-1, 1))), axis=1) pi2 = np.pi/2. # get the convex hull for the points hull_points = points[ConvexHull(points).vertices] # calculate edge angles edges = np.zeros((len(hull_points)-1, 2)) edges = hull_points[1:] - hull_points[:-1] angles = np.zeros((len(edges))) angles = np.arctan2(edges[:, 1], edges[:, 0]) angles = np.abs(np.mod(angles, pi2)) angles = np.unique(angles) # find rotation matrices # XXX both work rotations = np.vstack([ np.cos(angles), np.cos(angles-pi2), np.cos(angles+pi2), np.cos(angles)]).T # rotations = np.vstack([ # np.cos(angles), # -np.sin(angles), # np.sin(angles), # np.cos(angles)]).T rotations = rotations.reshape((-1, 2, 2)) # apply rotations to the hull rot_points = np.dot(rotations, hull_points.T) # find the bounding points min_x =
np.nanmin(rot_points[:, 0], axis=1)
numpy.nanmin
#!/usr/bin/env python # -*- coding: utf-8 -*- import numpy as np #from choldate import cholupdate, choldowndate import scipy.special as special import scipy.constants as constants import scipy.optimize as optimize from .lda import LDA class JLDA(LDA): ''' Join Latent Dirichlet Allocation ''' def __init__(self, K, alpha, beta, kappa, nu, docs, vecs, V, trained=None): super(JLDA, self).__init__(K, alpha, beta, docs, V, trained) self.L = vecs[0][0][1].shape[0] self.vecs = vecs self.kappa = kappa self.nu = nu self.mu = np.zeros(self.L) # for simplicity self.Phi = np.identity(self.L) # for simplicity self._init_state_gaussian() def _init_state_gaussian(self): self.mu_z = np.zeros((self.K, self.L))\ + self.kappa * self.mu[np.newaxis, :] self.sigma_z = np.zeros((self.K, self.L, self.L))\ + self.Phi[np.newaxis, :, :] self.z_m_v = [] self.n_z_v = np.zeros(self.K) self.N_v = 0 for m, vec in enumerate(self.vecs): self.N_v += len(vec) z_n = [] for l, v in vec: z = np.random.randint(0, self.K) z_n.append(z) self.n_m_z[m, z] += 1 self.mu_z[z] += v self.sigma_z[z] += np.outer(v, v) # v v^T self.n_z_v[z] += 1 self.z_m_v.append(np.array(z_n)) for k in range(self.K): # kappa_z * mu_z mu_z^T # = kappa_z * (mu_z/kappa_z) (mu_z/kappa_z)^T self.sigma_z[k] += -np.outer(self.mu_z[k], self.mu_z[k])\ / (self.kappa + self.n_z_v[k]) # kappa * mu mu^T self.sigma_z[k] += self.kappa * np.outer(self.mu, self.mu) def inference(self): ''' Re-assignment of topics to words ''' for m, doc in enumerate(self.docs): z_n = self.z_m_n[m] z_v = self.z_m_v[m] n_m_z = self.n_m_z[m] for n, t in enumerate(doc): # discount for n-th word t with topic z self.discount(z_n, n_m_z, n, t) # sampling topic new_z for t p_z = self.n_z_w[:, t] * n_m_z / self.n_z new_z = np.random.multinomial(1, p_z / p_z.sum()).argmax() # set z the new topic and increment counters self.assignment(z_n, n_m_z, n, t, new_z) for n, (l, v) in enumerate(self.vecs[m]): # discount for n-th word t with topic z self.vec_discount(z_v, n_m_z, n, v) # sampling topic new_z for t p_v = self.vector_probability(v) new_z = np.random.multinomial(1, p_v / p_v.sum()).argmax() # set z the new topic and increment counters self.vec_assignment(z_v, n_m_z, n, v, new_z) def vec_discount(self, z_v, n_m_z, n, v): ''' Cancel a topic assigned to a word slot ''' z = z_v[n] n_m_z[z] -= 1 if self.trained is None: kappa_z = self.kappa + self.n_z_v[z] x = self.mu_z[z] / kappa_z - v self.sigma_z[z] -= (kappa_z / (kappa_z - 1)) * np.outer(x, x) self.mu_z[z] -= v self.n_z_v[z] -= 1 def vec_assignment(self, z_v, n_m_z, n, v, new_z): ''' Assign a topic to a word slot ''' z_v[n] = new_z n_m_z[new_z] += 1 if self.trained is None: self.mu_z[new_z] += v self.n_z_v[new_z] += 1 kappa_z = self.kappa + self.n_z_v[new_z] x = self.mu_z[new_z] / kappa_z - v self.sigma_z[new_z] += (kappa_z / (kappa_z - 1)) * np.outer(x, x) def vector_probability(self, v): kappa = self.n_z_v + self.kappa nu = self.n_z_v + self.nu mu = self.mu_z / kappa[:,np.newaxis] df = nu - self.L + 1 sigma = self.sigma_z * ((kappa + 1) / kappa / df)[:,np.newaxis,np.newaxis] dim = self.L result = self.simple_multivariate_t_distribution(v, mu, sigma, df, dim) return result def simple_multivariate_t_distribution(self, x, mu, sigma, df, d): ''' Multivariate t-student density: output: the density of the given element input: x = parameter (d dimensional numpy array or scalar) mu = mean (d dimensional numpy array or scalar) Sigma = scale matrix (dxd numpy array) df = degrees of freedom d: dimension ''' num = special.gamma((df + d)/2) xSigma = np.dot((x - mu), np.linalg.inv(sigma)) xSigma = np.array([xSigma[i, i] for i in range(self.K)]) denom = special.gamma(df / 2) * np.power(df * np.pi, d / 2.0)\ * np.power(np.linalg.det(sigma), 1 / 2.0)\ * np.power(1 + (1. / df)\ *
np.sum(xSigma * (x - mu), axis=1)
numpy.sum
# User/Nc717 # Lets update the title of this final file here # First error was here -> Common functionalities import time # remeber to remove it while making docker submission import pandas as pd import os from os import listdir, walk from os.path import join import numpy as np import keras import math from pathlib import Path import pandas as pd import tensorflow as tf import PIL.Image import PIL.ImageOps from tqdm import tqdm, tqdm_notebook import matplotlib.pyplot as plt print("All common packages loaded") # DL libraries import keras import keras.backend as K import tensorflow as tf from keras.models import load_model import cv2 from efficientnet.keras import EfficientNetB3, EfficientNetB4 #Reproducible results np.random.seed(17) tf.random.set_seed(17) seed_value = 17 os.environ['PYTHONHASHSEED']=str(seed_value) print("DL libraries loaded") #Keras-Retinanet modules from keras_retinanet.models import backbone, convert_model from keras_retinanet.utils.config import read_config_file, parse_anchor_parameters from keras_retinanet.utils.image import read_image_bgr, preprocess_image, resize_image print("keras-retinanet packages loaded, moving towards convert model module where we got an error") from keras_retinanet.bin.train import create_models #set WORKING DIRECTORY os.chdir('/usr/local/bin/src/') os.environ['CUDA_VISIBLE_DEVICES'] = '0' # ============= Inference model for object detection ==================== def get_joint_detection_model(model_path, model_type): """ Input -> Model path for the object detection model Model type-> Foot or Hand Output -> Inference model for getting the predictions on test images """ # config_file_path = '/usr/local/bin/config' if model_type == 'Foot_detection': # with open('/usr/local/bin/src/config.ini','w') as f: # f.write('[anchor_parameters]\nsizes = 32 64 128 256 512 1024\nstrides = 8 16 32 64 128 256\nratios = 1.2 1.5 2 2.5 3\nscales =1 1.5 2\n') model, training_model, prediction_model = create_models( backbone_retinanet=backbone('resnet50').retinanet, num_classes=5, weights=None, multi_gpu=False, freeze_backbone=True, lr=1e-3, config=read_config_file('/usr/local/bin/Config files/config_foot.ini')) training_model.load_weights(model_path) infer_model = convert_model(training_model, anchor_params = parse_anchor_parameters(read_config_file('/usr/local/bin/Config files/config_foot.ini'))) elif model_type == 'Hand_detection': # with open('/usr/local/bin/src/config.ini','w') as f: # f.write('[anchor_parameters]\nsizes = 32 64 128 256 512 1024\nstrides = 8 16 32 64 128 256\nratios = 1 1.5 2 2.5 3\nscales = 1 1.2 1.6\n') model, training_model, prediction_model = create_models( backbone_retinanet=backbone('resnet50').retinanet, num_classes=6, weights=None, multi_gpu=False, freeze_backbone=True, lr=1e-3, config=read_config_file('/usr/local/bin/Config files/config_hand.ini')) training_model.load_weights(model_path) infer_model = convert_model(training_model, anchor_params = parse_anchor_parameters(read_config_file('/usr/local/bin/Config files/config_hand.ini'))) return infer_model # ===================== Function for loading images in correct orientation ================= def exif_transpose(img): if not img: return img exif_orientation_tag = 274 # Check for EXIF data (only present on some files) if hasattr(img, "_getexif") and isinstance(img._getexif(), dict) and exif_orientation_tag in img._getexif(): exif_data = img._getexif() orientation = exif_data[exif_orientation_tag] # Handle EXIF Orientation if orientation == 1: # Normal image - nothing to do! pass elif orientation == 2: # Mirrored left to right img = img.transpose(PIL.Image.FLIP_LEFT_RIGHT) elif orientation == 3: # Rotated 180 degrees img = img.rotate(180) elif orientation == 4: # Mirrored top to bottom img = img.rotate(180).transpose(PIL.Image.FLIP_LEFT_RIGHT) elif orientation == 5: # Mirrored along top-left diagonal img = img.rotate(-90, expand=True).transpose(PIL.Image.FLIP_LEFT_RIGHT) elif orientation == 6: # Rotated 90 degrees img = img.rotate(-90, expand=True) elif orientation == 7: # Mirrored along top-right diagonal img = img.rotate(90, expand=True).transpose(PIL.Image.FLIP_LEFT_RIGHT) elif orientation == 8: # Rotated 270 degrees img = img.rotate(90, expand=True) return img # ======================= Function to load images using PIL =================== def load_image_file(file, mode='RGB'): # Load the image with PIL img = PIL.Image.open(file) if hasattr(PIL.ImageOps, 'exif_transpose'): # Very recent versions of PIL can do exit transpose internally img = PIL.ImageOps.exif_transpose(img) else: # Otherwise, do the exif transpose ourselves img = exif_transpose(img) img = img.convert(mode) return np.array(img) # =========================== Test generator for joint prediction =================== def test_gen(image_ids, test_path , bs = 1, min_size = 1000, max_size = 1400, test = True): imgs = [] scale = None idx = 0 if test: path = test_path else: path = 'training_data/images/' while idx < len(image_ids): if len(imgs) < bs: image_id_iter = image_ids[idx] imgs.append(resize_image(preprocess_image(load_image_file(path + "/" + image_ids[idx] + '.jpg')),min_side=min_size,max_side=max_size)[0]) scale = resize_image(preprocess_image(load_image_file(path + "/" + image_ids[idx] + '.jpg')),min_side=min_size,max_side=max_size)[1] idx += 1 else: yield image_id_iter, np.array(imgs), scale imgs = [] if len(imgs) > 0: yield image_id_iter, np.array(imgs), scale # ===================== Loading image functionality ======================== def get_image_to_array(PATH, file, size): img = cv2.imread(os.path.join(PATH, file)) img = cv2.resize(img, (size, size)) if img.shape[2] ==1: img = np.dstack([img, img, img]) img = cv2.cvtColor(img, cv2.COLOR_BGR2RGB) img = img.astype(np.float32)/255. return img def get_input_img_array(path, size): image = load_image_file(path) image = cv2.resize(image, (size, size)) image = cv2.cvtColor(image, cv2.COLOR_BGR2RGB) image = image.astype(np.float32)/255. return image def strong_aug(p=0.5): return Compose([ RandomRotate90(), HorizontalFlip(p=1), # RandomGridShuffle(grid=(5, 5), p=0.1), Flip(), Transpose(), ChannelShuffle(p=1), ], p=p) # ============================ Predicitons for joints ========================= def get_predictions_for_joints(test_path, image_ids_list, model_path_dict): np.random.seed(17) """ Input -> Image ID list has to be UAB001-LF, .... format Test_path-> Path where images are loacted for predcitions Model_path -> Dictionary with the path for Foot and Hand model detion Type -> Type of detection to be performed Output -> Prediction files saved in the desired folder """ #All joints arrays #Foot package foot_finger_size_256 = [] foot_finger_size_224 = [] foot_finger_id = [] #Hand narrowing package hand_finger_256 = [] hand_finger_224 = [] hand_finger_narrowing_id = [] hand_finger_all = [] hand_finger_all_id = [] #Wrist package hand_ip = [] hand_ip_id =[] #Wrist package wrist = [] wrist_id = [] for type in model_path_dict.keys(): # Select image IDS # Model definition takes place here if type == 'Foot_detection': infer_model = get_joint_detection_model(model_path_dict[type], type) image_ids_filtered = [image for image in image_ids_list if image.split("-")[1] in ['LF','RF']] label_map = {1:'fin_ip',2:'fin_1',3:'fin_2',4:'fin_3',5:'fin_4'} # min_size = 800 # max_size = 1100 # If this does'nt work use the upper sizes min_size = 1000 max_size = 1400 elif type == 'Hand_detection': infer_model = get_joint_detection_model(model_path_dict[type], type) image_ids_filtered = [image for image in image_ids_list if image.split("-")[1] in ['LH','RH']] label_map = {1:'fin_ip',2:'fin_1',3:'fin_2',4:'fin_3',5:'fin_4',6:'wrist'} min_size = 1000 max_size = 1400 image_ids = sorted(image_ids_filtered) test_bs = 1 # Joint prediction and extraction is done in this loop for image_id, imgs, scale in tqdm(test_gen(image_ids, test_path, bs = test_bs), total = math.ceil(len(image_ids)/test_bs)): # shapes_of_images.append(imgs.shape) boxes, scores, labels = infer_model.predict_on_batch(imgs) #Boxes set as per original image size # boxes /= scale temp = pd.DataFrame([list(labels[0]), list(scores[0])]).T temp.columns = ['labels', 'scores'] temp['labels'] = temp['labels'] + 1 temp_a = pd.DataFrame(boxes[0], dtype = 'int') temp_a.columns = ['xmin','ymin','xmax','ymax'] final_temp = pd.concat([temp, temp_a], axis = 1) final_temp.columns = ['labels', 'scores', 'xmin','ymin','xmax','ymax'] final_temp = final_temp[final_temp['scores'] > 0] final_temp['xmin'] = final_temp['xmin'].astype('int') final_temp['ymin'] = final_temp['ymin'].astype('int') final_temp['xmax'] = final_temp['xmax'].astype('int') final_temp['ymax'] = final_temp['ymax'].astype('int') print("Predictions read") idx = final_temp.groupby(['labels'])['scores'].transform(max) == final_temp['scores'] ffl_df = final_temp[idx] abc = ffl_df.sort_values(by ='labels', ascending=True) abc['labels'] = abc['labels'].replace(label_map) print(image_id) print(abc) image_from_opencv = resize_image(load_image_file(os.path.join(test_path, image_id + ".jpg")), min_side=min_size,max_side=max_size)[0] ## Read the necessary image # size = 256 for labels in abc['labels'].unique().tolist(): #Extracting box for the joint boxes =
np.array(abc[abc['labels'] == labels][['xmin','ymin','xmax','ymax']].values[0], dtype='int')
numpy.array
# -*- coding: utf-8 -*- from __future__ import print_function, division # QuSpin modules # numpy modules import numpy as _np # generic math functions # _scipy modules import scipy as _scipy import scipy.sparse as _sp from scipy.sparse.linalg import expm_multiply as _expm_multiply # multi-processing modules from multiprocessing import Process as _Process from multiprocessing import Queue as _Queue from multiprocessing import Event as _Event from joblib import Parallel as _Parallel from joblib import delayed as _delayed # six for python 2.* and 3.* dictionary compatibility from six import iteritems as _iteritems from six import itervalues as _itervalues try: from itertools import izip as _izip except ImportError: _izip = zip __all__=["block_diag_hamiltonian","block_ops"] def block_diag_hamiltonian(blocks,static,dynamic,basis_con,basis_args,dtype,basis_kwargs={},get_proj_kwargs={},get_proj=True,check_symm=True,check_herm=True,check_pcon=True): """Block-diagonalises a Hamiltonian obeying a symmetry. The symmetry blocks are created via the argument 'blocks'. Examples -------- The example below demonstrates how to to use the `block_diag_hamiltonian()` function to block-diagonalise the single-particle Hamiltonian .. math:: H=\\sum_j (J+(-1)^j\\delta J)b^\\dagger_{j+1} b_j + \\mathrm{h.c.} + \\Delta(-1)^j b^\\dagger_j b_j with respect to translation symemtry. The Fourier transform is computed along the way. .. literalinclude:: ../../doc_examples/block_diag_hamiltonian-example.py :linenos: :language: python :lines: 7- Parameters ----------- blocks : list/tuple/iterator Contains the symmetry blocks to construct the Hamiltonian with, as dictionaries. static : list Static operator list used to construct the block Hamiltonians. Follows `hamiltonian` format. dynamic : list Dynamic operator list used to construct the block Hamiltonians. Follows `hamiltonian` format. basis_con : :obj:`basis` Basis constructor used to build the basis objects to create the block diagonal Hamiltonians. basis_args : tuple This argument is passed as the first argument for `basis_con`. Contains all required arguments for the basis. dtype : 'type' The data type (e.g. numpy.float64) to construct the Hamiltonian with. get_proj : bool, optional Flag which tells the function to calculate and return the projector to the symmetry-block subpace requested. Default is 'True'. basis_kwargs : dict, optional Dictionary of keyword arguments to add when calling `basis` constructor. get_proj_kwargs : dict, optional Dictionary of keyword arguments for `basis.get_proj()` and `basis.get_vec()`. check_symm : bool, optional Enable/Disable symmetry check of the operators for the first Hamiltonian constructed. check_herm : bool, optional Enable/Disable hermiticity check of the operators for the first Hamiltonian constructed. check_pcon : bool, optional Enable/Disable particle conservation check of the operators for the first Hamiltonian constructed. Returns -------- tuple P : scipy.sparse.csr Projector to the symmetr-block subspace (e.g. Fourier transform in case of momentum blocks). H : `obj` `hamiltonian` object in block diagonal form. Raises ------ ValueError If `blocks` is not a list of `hamiltonian` objects or a list of dictionaries containing the symmetry sectors. """ from ..operators import hamiltonian H_list = [] P_list = [] blocks = list(blocks) if all([isinstance(block,dict) for block in blocks]): [blocks[i].update(basis_kwargs) for i in range(len(blocks))] dynamic_list = [(tup[-2],tuple(tup[-1])) for tup in dynamic] dynamic_list = [([],f,f_args) for f,f_args in set(dynamic_list)] static_mats = [] for block in blocks: b = basis_con(*basis_args,**block) if get_proj: P = b.get_proj(dtype,**get_proj_kwargs) P_list.append(P) H = hamiltonian(static,dynamic,basis=b,dtype=dtype,check_symm=check_symm,check_herm=check_herm,check_pcon=check_pcon) check_symm = False check_herm = False check_pcon = False static_mats.append(H.static.tocoo()) for i,Hd in enumerate(_itervalues(H.dynamic)): dynamic_list[i][0].append(Hd.tocoo()) static = [_sp.block_diag(static_mats,format="csr")] dynamic = [] for mats,f,f_args in dynamic_list: mats = _sp.block_diag(mats,format="csr") dynamic.append([mats,f,f_args]) else: raise ValueError("blocks must be list of dictionaries containing symmetry sectors.") if get_proj: P = _sp.hstack(P_list,format="csr") return P,hamiltonian(static,dynamic,copy=False) else: return hamiltonian(static,dynamic,copy=False) def _worker(gen_func,args_list,q,e): """ Worker function which loops over one of more generators provided by `gen_func` and returns the result via queue `q`. Waits for signal from `e` before continuing. """ gens = [] for arg in args_list: gens.append(gen_func(*arg)) generator = _izip(*gens) for s in generator: e.clear() q.put(s) e.wait() q.close() def _generate_parallel(n_process,n_iter,gen_func,args_list): """ Generator which spawns processes to run generators, then uses a queue for each process to retrieve the results which it then yields. """ n_items = len(args_list) # calculate how to distribute generators over processes. if n_items <= n_process and n_process > 0: n_process = n_items n_pp = 1 n_left = 1 elif n_items > n_process and n_process > 0: n_pp = n_items//n_process n_left = n_pp + n_items%n_process # if one process specified just do the generator without sub processes. if n_process <= 1: gens = [] for arg in args_list: gens.append(gen_func(*arg)) generator = _izip(*gens) for s in generator: yield s return # split up argument list sub_lists = [args_list[0:n_left]] sub_lists.extend([ args_list[n_left + i*n_pp:n_left + (i+1)*n_pp] for i in range(n_process-1)]) # create lists of queues, events, and processes. es = [] qs = [] ps = [] for i in range(n_process): e = _Event() q = _Queue(1) p = _Process(target=_worker, args=(gen_func,sub_lists[i],q,e)) p.daemon = True es.append(e) qs.append(q) ps.append(p) # start processes for p in ps: p.start() # for number of iterations for i in range(n_iter): s = [] # retrieve results for each sub-process and let the process know to continue calculation. for q,e in _izip(qs,es): s.extend(q.get()) e.set() # free process to do next calculation # yield all results yield tuple(s) # end processes for p in ps: p.join() def _evolve_gen(psi,H,t0,times,stack_state,imag_time,solver_name,solver_args): """Generating function for evolution with `H.evolve`.""" for psi in H.evolve(psi,t0,times,stack_state=stack_state,imag_time=imag_time,solver_name=solver_name,iterate=True,**solver_args): yield psi def _expm_gen(psi,H,times,dt): """Generating function for evolution via `_expm_multiply`.""" if times[0] != 0: H *= times[0] psi = _expm_multiply(H,psi) H /= times[0] yield psi H *= dt for t in times[1:]: psi = _expm_multiply(H,psi) yield psi H /= dt def _block_evolve_iter(psi_blocks,H_list,P,t0,times,stack_state,imag_time,solver_name,solver_args,n_jobs): """using `_generate_parallel` to get block evolution yields state in full H-space.""" args_list = [(psi_blocks[i],H_list[i],t0,times,stack_state,imag_time,solver_name,solver_args) for i in range(len(H_list))] for psi_blocks in _generate_parallel(n_jobs,len(times),_evolve_gen,args_list): psi_t = _np.hstack(psi_blocks) yield P.dot(psi_t) def _block_expm_iter(psi_blocks,H_list,P,start,stop,num,endpoint,n_jobs): """using `_generate_parallel` to get block evolution yields state in full H-space.""" times,dt = _np.linspace(start,stop,num=num,endpoint=endpoint,retstep=True) args_list = [(psi_blocks[i],H_list[i],times,dt) for i in range(len(H_list))] for psi_blocks in _generate_parallel(n_jobs,len(times),_expm_gen,args_list): psi_t = _np.hstack(psi_blocks) yield P.dot(psi_t) def _block_evolve_helper(H,psi,t0,times,stack_state,imag_time,solver_name,solver_args): """helper functions for doing evolution not with iterator.""" return H.evolve(psi,t0,times,stack_state=stack_state,imag_time=imag_time,solver_name=solver_name,**solver_args) class block_ops(object): """Splits up the dynamics of a state over various symmetry sectors. Particularly useful if the initial state does NOT obey a symmetry but the hamiltonian does. Moreover, we provide a multiprocessing option which allows the user to split up the dynamics over multiple processing cores. Can be used to calculate nonequal time correlators in symmetry-reduced sectors. Notes ----- The `block_ops` object is initialised only after calling the function methods of the class to save memory. Examples -------- The following sequence of examples uses the Bose-Hubbard model .. math:: H=-J\\sum_j b^\\dagger_{j+1}b_j + \\mathrm{h.c.} + \\frac{U}{2}\\sum_j n_j(n_j-1) to show how to use the `block_ops` class to evolve a Fock state, which explicitly breaks translational invariance, by decomposing it in all momentum blocks, time-evolving the projections, and putting the state back together in the Fock basis in the end. We use the time-evolved state to measure the local density operator :math:`n_j`. The code snippets for the time evolution can be found in the examples for the function methods of the class. The code snippet below initiates the class, and is required to run the example codes for the function methods. .. literalinclude:: ../../doc_examples/block_ops-example.py :linenos: :language: python :lines: 7-55 """ def __init__(self,blocks,static,dynamic,basis_con,basis_args,dtype,basis_kwargs={},get_proj_kwargs={},save_previous_data=True,compute_all_blocks=False,check_symm=True,check_herm=True,check_pcon=True): """Instantiates the `block_ops` class. Parameters ----------- blocks : list/tuple/iterator Contains the symmetry blocks to construct the Hamiltonian with, as dictionaries or `hamiltonian` objects. static : list Static operator list used to construct the block Hamiltonians. Follows `hamiltonian` format. dynamic : list Dynamic operator list used to construct the block Hamiltonians. Follows `hamiltonian` format. basis_con : :obj:`basis` Basis constructor used to build the basis objects to create the block diagonal Hamiltonians. basis_args : tuple This argument is passed as the first argument for `basis_con`. Contains all required arguments for the basis. dtype : 'type' The data type (e.g. numpy.float64) to construct the Hamiltonian with. basis_kwargs : dict, optional Dictionary of keyword arguments to add when calling `basis` constructor. get_proj_kwargs : dict, optional Dictionary of keyword arguments for `basis.get_proj()` and `basis.get_vec()`. save_previous_data : bool, optional To do time evolution the `block_ops` class constructs Hamiltonians, which can take time. Set this flag to `True`, and the class will save previously calculated Hamiltonians, so next time one needs to do evolution in that block, the code does NOT have to calculate it again. Default is `True`. compute_all_blocks : bool, optional Flag which tells the `block_ops` class to compute all symmetry blocks at initialization. Default is `False`. This option sets `save_previous_data = True` automatically. check_symm : bool, optional Enable/Disable symmetry check of the operators for the first Hamiltonian constructed. check_herm : bool, optional Enable/Disable hermiticity check of the operators for the first Hamiltonian constructed. check_pcon : bool, optional Enable/Disable particle conservation check of the operators for the first Hamiltonian constructed. """ self._basis_dict = {} self._H_dict = {} self._P_dict = {} self._dtype=dtype self._save = save_previous_data self._static = static self._dynamic = dynamic self._checks = {"check_symm":check_symm,"check_herm":check_herm,"check_pcon":check_pcon} self._no_checks = {"check_symm":False,"check_herm":False,"check_pcon":False} self._checked = False self._get_proj_kwargs = get_proj_kwargs for block in blocks: block.update(basis_kwargs) b = basis_con(*basis_args,**block) if b.Ns > 0: self._basis_dict[str(block)]=b if compute_all_blocks: self._save=True self.compute_all_blocks() @property def dtype(self): """type: numpy data type to store the block hamiltonians in.""" return self._dtype @property def save_previous_data(self): """bool: reflects state of optimal argument `save_previous_data`.""" return self._save @property def H_dict(self): """dict: dictionary which contains the block Hamiltonians under keys labelled by the symmetry blocks, e.g. `str(block)` where `block` is a block dictionary variable. """ return self._H_dict @property def P_dict(self): """dict: dictionary which contains the block projectors under keys labelled by the symmetry blocks, e.g. `str(block)` where `block` is a block dictionary variable. """ return self._P_dict @property def basis_dict(self): """dict: dictionary which contains the `basis` objects under keys labelled by the symmetry blocks, e.g. `str(block)` where `block` is a block dictionary variable. """ return self._basis_dict @property def static(self): """list: contains the static operators used to construct the symmetry-block Hamiltonians.""" return list(self._static) @property def dynamic(self): """list: contains the dynamic operators used to construct the symmetry-block Hamiltonians.""" return list(self._dynamic) def update_blocks(self,blocks,basis_con,basis_args,compute_all_blocks=False): """Allows to update the `blocks` variable of the class. Parameters ----------- blocks : list/tuple/iterator Contains the new symmetry blocks to be added to the `basis_dict` attribute of the class, as dictionaries or `hamiltonian` objects. basis_con : :obj:`basis` Basis constructor used to build the basis objects to create the new block diagonal Hamiltonians. basis_args : tuple This argument is passed as the first argument for `basis_con`. Contains all required arguments for the basis. compute_all_blocks : bool, optional Flag which tells the `block_ops` class to compute all symmetry blocks at initialization. Default is `False`. """ blocks = list(blocks) for block in blocks: if str(block) not in self._basis_dict.keys(): b = basis_con(*basis_args,**block) if b.Ns > 0: self._basis_dict[str(block)]=b if compute_all_blocks: self.compute_all_blocks() def compute_all_blocks(self): """Sets `compute_all_blocks = True`. Examples -------- The example below builds on the code snippet shown in the description of the `block_ops` class. .. literalinclude:: ../../doc_examples/block_ops-example.py :linenos: :language: python :lines: 57-58 """ from ..operators import hamiltonian for key,b in _iteritems(self._basis_dict): if self._P_dict.get(key) is None: p = b.get_proj(self.dtype,**self._get_proj_kwargs) self._P_dict[key] = p if self._H_dict.get(key) is None: if not self._checked: H = hamiltonian(self._static,self._dynamic,basis=b,dtype=self.dtype,**self._checks) self._checked=True else: H = hamiltonian(self._static,self._dynamic,basis=b,dtype=self.dtype,**self._no_checks) self._H_dict[key] = H def _get_P(self,key): if self._P_dict.get(key) is None: p = self._basis_dict[key].get_proj(self.dtype,**self._get_proj_kwargs) if self._save: self._P_dict[key] = p return p else: return self._P_dict[key] def _get_H(self,key): from ..operators import hamiltonian if self._H_dict.get(key) is None: if not self._checked: H = hamiltonian(self._static,self._dynamic,basis=self._basis_dict[key],dtype=self.dtype,**self._checks) self._checked=True else: H = hamiltonian(self._static,self._dynamic,basis=self._basis_dict[key],dtype=self.dtype,**self._no_checks) if self._save: self._H_dict[key] = H return H else: return self._H_dict[key] def evolve(self,psi_0,t0,times,iterate=False,n_jobs=1,block_diag=False,stack_state=False,imag_time=False,solver_name="dop853",**solver_args): """Creates symmetry blocks of the Hamiltonian and then uses them to run `hamiltonian.evolve()` in parallel. **Arguments NOT described below can be found in the documentation for the `hamiltonian.evolve()` method.** Examples -------- The example below builds on the code snippet shown in the description of the `block_ops` class. .. literalinclude:: ../../doc_examples/block_ops-example.py :linenos: :language: python :lines: 69- Parameters ----------- psi_0 : numpy.ndarray, list, tuple Quantum state which defined on the full Hilbert space of the problem. Does not need to obey and sort of symmetry. t0 : float Inistial time to start the evolution at. times : numpy.ndarray, list Contains the times to compute the solution at. Must be some an iterable object. iterate : bool, optional Flag to return generator when set to `True`. Otherwise the output is an array of states. Default is 'False'. n_jobs : int, optional Number of processes requested for the computation time evolution dynamics. NOTE: one of those processes is used to gather results. For best performance, all blocks should be approximately the same size and `n_jobs-1` must be a common devisor of the number of blocks, such that there is roughly an equal workload for each process. Otherwise the computation will be as slow as the slowest process. block_diag : bool, optional When set to `True`, this flag puts the Hamiltonian matrices for the separate symemtry blocks into a list and then loops over it to do time evolution. When set to `False`, it puts all blocks in a single giant sparse block diagonal matrix. Default is `False`. This flag is useful if there are a lot of smaller-sized blocks. Returns -------- obj if `iterate = True`, returns generator which generates the time dependent state in the full H-space basis. if `iterate = False`, returns `numpy.ndarray` which has the time-dependent states in the full H-space basis in the rows. Raises ------ ValueError Variable `imag_time=True` option on `hamiltonian.evolve()` method not supported. ValueError `iterate=True` requires `times` to be an array or a list. RuntimeError Terminates when initial state has no projection onto the specified symmetry blocks. """ if imag_time: raise ValueError("imaginary time not supported for block evolution.") P = [] H_list = [] psi_blocks = [] for key,b in _iteritems(self._basis_dict): p = self._get_P(key) if _sp.issparse(psi_0): psi = p.H.dot(psi_0).toarray() else: psi = p.H.dot(psi_0) psi = _np.asarray(psi).ravel() if _np.linalg.norm(psi) > 1000*_np.finfo(self.dtype).eps: psi_blocks.append(psi) P.append(p.tocoo()) H_list.append(self._get_H(key)) if block_diag and H_list: N_H = len(H_list) n_pp = N_H//n_jobs n_left = n_pp + N_H%n_jobs H_list_prime = [] psi_blocks_prime = [] if n_left != 0: H_list_prime.append(block_diag_hamiltonian(H_list[:n_left],None,None,None,None,self._dtype,get_proj=False,**self._no_checks)) psi_list_prime.append(_np.hstack(psi_blocks[:n_left])) for i in range(n_jobs-1): i1 = n_left + i*n_pp i2 = n_left + (i+1)*n_pp H_list_prime.append(block_diag_hamiltonian(H_list[i1:i2],None,None,None,None,self._dtype,get_proj=False,**self._no_checks)) psi_list_prime.append(
_np.hstack(psi_blocks[i1:i2])
numpy.hstack
import matplotlib.pyplot as plt from statistics import mean import csv import numpy as np with open('./trajectory_x.csv') as f: reader = csv.reader(f) centers_x = [int(row[0]) for row in reader] with open('./trajectory_y.csv') as f: reader = csv.reader(f) centers_y = [int(row[0]) for row in reader] def dist(x, y): return (x - y)**2 def get_min(m0, m1, m2, i, j): if m0 < m1: if m0 < m2: return i - 1, j, m0 else: return i - 1, j - 1, m2 else: if m1 < m2: return i, j - 1, m1 else: return i - 1, j - 1, m2 def partial_dtw(x, y): Tx = len(x) Ty = len(y) C = np.zeros((Tx, Ty)) B = np.zeros((Tx, Ty, 2), int) C[0, 0] = dist(x[0], y[0]) for i in range(Tx): C[i, 0] = dist(x[i], y[0]) B[i, 0] = [0, 0] for j in range(1, Ty): C[0, j] = C[0, j - 1] + dist(x[0], y[j]) B[0, j] = [0, j - 1] for i in range(1, Tx): for j in range(1, Ty): pi, pj, m = get_min(C[i - 1, j], C[i, j - 1], C[i - 1, j - 1], i, j) C[i, j] = dist(x[i], y[j]) + m B[i, j] = [pi, pj] t_end = np.argmin(C[:,-1]) cost = C[t_end, -1] path = [[t_end, Ty - 1]] i = t_end j = Ty - 1 while (B[i, j][0] != 0 or B[i, j][1] != 0): path.append(B[i, j]) i, j = B[i, j].astype(int) return np.array(path), cost def spring(x, y, epsilon): Tx = len(x) Ty = len(y) C = np.zeros((Tx, Ty)) B = np.zeros((Tx, Ty, 2), int) S = np.zeros((Tx, Ty), int) C[0, 0] = dist(x[0], y[0]) for j in range(1, Ty): C[0, j] = C[0, j - 1] + dist(x[0], y[j]) B[0, j] = [0, j - 1] S[0, j] = S[0, j - 1] for i in range(1, Tx): C[i, 0] = dist(x[i], y[0]) B[i, 0] = [0, 0] S[i, 0] = i for j in range(1, Ty): pi, pj, m = get_min(C[i - 1, j], C[i, j - 1], C[i - 1, j - 1], i, j) C[i, j] = dist(x[i], y[j]) + m B[i, j] = [pi, pj] S[i, j] = S[pi, pj] imin = np.argmin(C[:(i+1), -1]) dmin = C[imin, -1] if dmin > epsilon: continue for j in range(1, Ty): if (C[i,j] < dmin) and (S[i, j] < imin): break else: path = [[imin, Ty - 1]] temp_i = imin temp_j = Ty - 1 while (B[temp_i, temp_j][0] != 0 or B[temp_i, temp_j][1] != 0): path.append(B[temp_i, temp_j]) temp_i, temp_j = B[temp_i, temp_j].astype(int) C[S <= imin] = 100000000 yield np.array(path), dmin from scipy.signal import savgol_filter query = np.array(centers_x) query_vel = np.diff(query) query_vel = savgol_filter(query_vel, 11, 3) query_acc = np.diff(query_vel) template1 = np.array(centers_x[270:300]) template1_vel = np.diff(template1) template1_vel = savgol_filter(template1_vel, 11, 3) template2 = np.array(centers_x[470:529]) template2_vel = np.diff(template2) template2_vel = savgol_filter(template2_vel, 17, 3) template3 = np.array(centers_x[470:529]) template3_vel = np.diff(template3) template3_vel = savgol_filter(template3_vel, 11, 3) template4 = np.array(centers_x[1126:1165]) template4_vel =
np.diff(template4)
numpy.diff
import numpy as np from . import numpy as npext # pylint: disable = reimported def tuning_curves(ens, sim, inputs=None): """Calculates the tuning curves of an ensemble. That is the neuron responses in dependence of the vector represented by the ensemble. For 1-dimensional ensembles, the unpacked return value of this function can be passed directly to ``matplotlib.pyplot.plot``. Parameters ---------- ens : nengo.Ensemble Ensemble to calculate the tuning curves of. sim : nengo.Simulator Simulator providing information about the built ensemble. (An unbuilt ensemble does not have tuning curves assigned to it.) inputs : sequence of ndarray, optional The inputs at which the tuning curves will be evaluated. For each of the ``D`` ensemble dimensions one array of dimensionality ``D`` is needed. The output of :func:`numpy.meshgrid` with ``indexing='ij'`` is in the right format. Returns ------- inputs : sequence of ndarray The passed or auto-generated ``inputs``. activities : ndarray The activities of the individual neurons given the ``inputs``. For ensembles with 1 dimension, the rows correspond to the ``inputs`` and the columns to individual neurons. For ensembles with > 1 dimension, the last dimension enumerates the neurons, the remaining dimensions map to ``inputs``. See Also -------- response_curves """ # note: imported here to avoid circular imports from nengo.builder.ensemble import ( # pylint: disable=import-outside-toplevel get_activities, ) if inputs is None: inputs = np.linspace(-ens.radius, ens.radius) if ens.dimensions > 1: inputs = npext.meshgrid_nd(*(ens.dimensions * [inputs])) else: inputs = [inputs] inputs = np.asarray(inputs).T else: inputs =
np.asarray(inputs)
numpy.asarray
import csv import cv2 import numpy as np import pandas as pd import sys from datetime import datetime from numpy.random import RandomState import keras import tensorflow as tf from keras.models import Sequential from keras.callbacks import ModelCheckpoint from keras.layers import Flatten, Dense, Lambda, Cropping2D, Conv2D, Dropout, MaxPool2D def DrivingNetV1(): model = Sequential() model.add( Cropping2D( cropping=( (90,20), (0,0) ), input_shape=( 160, 320, 3 ) ) ) model.add( Lambda( lambda x: (x/255.0) - 0.5 ) ) model.add( Flatten( ) ) model.add( Dense(1) ) return model def NVIDIANetV0( lr=1e-3): model = Sequential( name="NVIDIANetV0" ) model.add( Lambda( lambda x: (x/255.0) - 0.5, input_shape=( 160, 320, 3 ) ) ) model.add( Cropping2D( cropping=( (70,25), (0,0) ) ) ) model.add( Conv2D( 24, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 36, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 48, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 64, 3, activation='relu', padding='valid' ) ) model.add( Conv2D( 64, 3, activation='relu', padding='valid' ) ) model.add( Flatten( ) ) #model.add( Dense(1164, activation='relu' ) ) #model.add( Dropout(0.2)) model.add( Dense(100, activation='linear' ) ) model.add( Dense(50, activation='linear' ) ) model.add( Dense(10, activation='linear' ) ) model.add( Dense(1, activation='linear') ) opt = keras.optimizers.Adam(learning_rate=lr ) model.compile( loss='mse', optimizer=opt ) return model def NVIDIANetV1( lr=1e-3): model = Sequential( name="NVIDIANetV1" ) model.add( Lambda( lambda x: (x/255.0) - 0.5, input_shape=( 160, 320, 3 ) ) ) model.add( Cropping2D( cropping=( (70,25), (0,0) ) ) ) model.add( Conv2D( 24, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 36, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 48, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 64, 3, activation='relu', padding='valid' ) ) model.add( Conv2D( 64, 3, activation='relu', padding='valid' ) ) model.add( Flatten( ) ) #model.add( Dense(1164, activation='relu' ) ) #model.add( Dropout(0.2)) model.add( Dense(100, activation='tanh' ) ) model.add( Dense(50, activation='tanh' ) ) model.add( Dense(10, activation='tanh' ) ) model.add( Dense(1, activation='linear') ) #Converting curvature to angle, assuming wheelbase of 2 meters, then going from rad to deg #The network output was supposed to be 1/R (r), the function then convert it to steering angle (alpha) [deg] # alpha = atan(l*r)*57.3. l = wheelbase, supossed to be 2 meters model.add( Lambda( lambda x: tf.multiply( tf.atan( tf.multiply( x, 2 ) ), 57.3 ) ) ) opt = keras.optimizers.Adam(learning_rate=lr ) model.compile( loss='mse', optimizer=opt ) return model def NVIDIANetV2( lr=1e-3): model = Sequential( name="NVIDIANetV2" ) model.add( Lambda( lambda x: (x/255.0) - 0.5, input_shape=( 160, 320, 3 ) ) ) model.add( Cropping2D( cropping=( (70,25), (0,0) ) ) ) model.add( Conv2D( 24, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 36, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 48, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 64, 3, activation='relu', padding='valid' ) ) model.add( Conv2D( 64, 3, activation='relu', padding='valid' ) ) model.add( Flatten( ) ) model.add( Dense(100, activation='linear' ) ) model.add( Dense(50, activation='linear' ) ) model.add( Dense(10, activation='linear' ) ) model.add( Dense(1, activation='linear') ) #Converting curvature to angle, assuming wheelbase of 2 meters, then going from rad to deg #The network output was supposed to be 1/R (r), the function then convert it to steering angle (alpha) [deg] # alpha = atan(l*r)*57.3. l = wheelbase, supossed to be 2 meters model.add( Lambda( lambda x: tf.multiply( tf.atan( tf.multiply( x, 2 ) ), 57.3 ) ) ) opt = keras.optimizers.Adam(learning_rate=lr ) model.compile( loss='mse', optimizer=opt ) return model def NVIDIANetV3( lr=1e-3): model = Sequential( name="NVIDIANetV3" ) model.add( Lambda( lambda x: (x/255.0) - 0.5, input_shape=( 160, 320, 3 ) ) ) model.add( Cropping2D( cropping=( (70,25), (0,0) ) ) ) model.add( Conv2D( 24, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 36, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 48, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 64, 3, activation='relu', padding='valid' ) ) model.add( Conv2D( 64, 3, activation='relu', padding='valid' ) ) model.add( Flatten( ) ) model.add( Dense(100, activation='tanh' ) ) model.add( Dropout(0.5) ) model.add( Dense(50, activation='tanh' ) ) model.add( Dropout(0.5) ) model.add( Dense(10, activation='tanh' ) ) model.add( Dropout(0.5) ) model.add( Dense(1, activation='linear') ) #Converting curvature to angle, assuming wheelbase of 2 meters, then going from rad to deg #The network output was supposed to be 1/R (r), the function then convert it to steering angle (alpha) [deg] # alpha = atan(l*r)*57.3. l = wheelbase, supossed to be 2 meters model.add( Lambda( lambda x: tf.multiply( tf.atan( tf.multiply( x, 2 ) ), 57.3 ) ) ) opt = keras.optimizers.Adam(learning_rate=lr ) model.compile( loss='mse', optimizer=opt ) return model def NVIDIANetV4( lr=1e-3): model = Sequential( name="NVIDIANetV4" ) model.add( Lambda( lambda x: (x/255.0) - 0.5, input_shape=( 160, 320, 3 ) ) ) model.add( Cropping2D( cropping=( (70,25), (0,0) ) ) ) model.add( Conv2D( 24, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 36, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 48, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 64, 3, activation='relu', padding='valid' ) ) model.add( Conv2D( 64, 3, activation='relu', padding='valid' ) ) model.add( Flatten( ) ) #model.add( Dense(1164, activation='relu' ) ) #model.add( Dropout(0.2)) model.add( Dense(100, activation='tanh' ) ) model.add( Dropout(0.5) ) model.add( Dense(50, activation='tanh' ) ) model.add( Dropout(0.25) ) model.add( Dense(10, activation='tanh' ) ) model.add( Dropout(0.125) ) model.add( Dense(1, activation='linear') ) #Converting curvature to angle, assuming wheelbase of 2 meters, then going from rad to deg #The network output was supposed to be 1/R (r), the function then convert it to steering angle (alpha) [deg] # alpha = atan(l*r)*57.3. l = wheelbase, supossed to be 2 meters model.add( Lambda( lambda x: tf.multiply( tf.atan( tf.multiply( x, 2 ) ), 57.3 ) ) ) opt = keras.optimizers.Adam(learning_rate=lr ) model.compile( loss='mse', optimizer=opt ) return model def NVIDIANetV5( lr=1e-3): model = Sequential( name="NVIDIANetV5" ) model.add( Lambda( lambda x: (x/255.0) - 0.5, input_shape=( 160, 320, 3 ) ) ) model.add( Cropping2D( cropping=( (70,25), (0,0) ) ) ) model.add( Conv2D( 24, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 36, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 48, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 64, 3, activation='relu', padding='valid' ) ) model.add( Conv2D( 64, 3, activation='relu', padding='valid' ) ) model.add( Flatten( ) ) model.add( Dense(100, activation='tanh' ) ) model.add( Dropout(0.5) ) model.add( Dense(50, activation='tanh' ) ) model.add( Dropout(0.25) ) model.add( Dense(10, activation='tanh' ) ) model.add( Dense(1, activation='linear') ) #Converting curvature to angle, assuming wheelbase of 2 meters, then going from rad to deg #The network output was supposed to be 1/R (r), the function then convert it to steering angle (alpha) [deg] # alpha = atan(l*r)*57.3. l = wheelbase, supossed to be 2 meters model.add( Lambda( lambda x: tf.multiply( tf.atan( tf.multiply( x, 2 ) ), 57.3 ) ) ) opt = keras.optimizers.Adam(learning_rate=lr ) model.compile( loss='mse', optimizer=opt ) return model def NVIDIANetV6( lr=1e-3): model = Sequential( name="NVIDIANetV6" ) model.add( Lambda( lambda x: (x/255.0) - 0.5, input_shape=( 160, 320, 3 ) ) ) model.add( Cropping2D( cropping=( (70,25), (0,0) ) ) ) model.add( Conv2D( 24, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 36, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 48, 5, 2, activation='relu', padding='valid' ) ) model.add( Conv2D( 64, 3, activation='relu', padding='valid' ) ) model.add( Conv2D( 64, 3, activation='relu', padding='valid' ) ) model.add( Flatten( ) ) model.add( Dropout(0.5) ) model.add( Dense(100, activation='tanh' ) ) model.add( Dropout(0.5) ) model.add( Dense(50, activation='tanh' ) ) model.add( Dropout(0.25) ) model.add( Dense(10, activation='tanh' ) ) model.add( Dense(1, activation='linear') ) #Converting curvature to angle, assuming wheelbase of 2 meters, then going from rad to deg #The network output was supposed to be 1/R (r), the function then convert it to steering angle (alpha) [deg] # alpha = atan(l*r)*57.3. l = wheelbase, supossed to be 2 meters model.add( Lambda( lambda x: tf.multiply( tf.atan( tf.multiply( x, 2 ) ), 57.3 ) ) ) opt = keras.optimizers.Adam(learning_rate=lr ) model.compile( loss='mse', optimizer=opt ) return model def ModNVIDIANetV1( lr=1e-3): model = Sequential( name = "ModNVIDIANetV1" ) model.add( Lambda( lambda x: (x/255.0) - 0.5, input_shape=( 160, 320, 3 ) ) ) model.add( Cropping2D( cropping=( (70,25), (0,0) ) ) ) #Keeping padding as "same" and applygin a max model.add( Conv2D( 24, 5, 1, activation='relu', padding='same' ) ) model.add( MaxPool2D( ) ) model.add( Conv2D( 36, 5, 1, activation='relu', padding='same' ) ) model.add( MaxPool2D( ) ) model.add( Conv2D( 48, 5, 1, activation='relu', padding='same' ) ) model.add( MaxPool2D( ) ) model.add( Conv2D( 64, 3, 1, activation='relu', padding='same' ) ) model.add( MaxPool2D( ) ) model.add( Conv2D( 64, 3, 1, activation='relu', padding='same' ) ) model.add( MaxPool2D( pool_size=(4, 2) ) ) #forcing to this output to become an "flat" model.add( Flatten( ) ) #model.add( Dense(1164, activation='relu' ) ) #model.add( Dropout(0.2)) model.add( Dense(300, activation='tanh' ) ) model.add( Dense(100, activation='tanh' ) ) model.add( Dense(50, activation='tanh' ) ) model.add( Dense(10, activation='tanh' ) ) model.add( Dense(1, activation='linear' ) ) #Converting curvature to angle, assuming wheelbase of 2 meters, then going from rad to deg #The network output was supposed to be 1/R (r), the function then convert it to steering angle (alpha) [deg] # alpha = atan(l*r)*57.3. l = wheelbase, supossed to be 2 meters model.add( Lambda( lambda x: tf.multiply( tf.atan( tf.multiply( x, 2 ) ), 57.3 ) ) ) opt = keras.optimizers.Adam(learning_rate=lr ) model.compile( loss='mse', optimizer=opt ) return model def ModNVIDIANetV2( lr=1e-3): model = Sequential( name = "ModNVIDIANetV2" ) model.add( Lambda( lambda x: (x/255.0) - 0.5, input_shape=( 160, 320, 3 ) ) ) model.add( Cropping2D( cropping=( (70,25), (0,0) ) ) ) #Keeping padding as "same" and applygin a max model.add( Conv2D( 24, 5, 1, activation='relu', padding='same' ) ) model.add( MaxPool2D( ) ) model.add( Conv2D( 36, 5, 1, activation='relu', padding='same' ) ) model.add( MaxPool2D( ) ) model.add( Conv2D( 48, 5, 1, activation='relu', padding='same' ) ) model.add( MaxPool2D( ) ) model.add( Conv2D( 64, 3, 1, activation='relu', padding='same' ) ) model.add( MaxPool2D( ) ) model.add( Conv2D( 64, 3, 1, activation='relu', padding='same' ) ) model.add( MaxPool2D( pool_size=(4, 2) ) ) #forcing to this output to become an "flat" model.add( Flatten( ) ) model.add( Dense(300, activation='linear' ) ) model.add( Dense(100, activation='linear' ) ) model.add( Dense(50, activation='linear' ) ) model.add( Dense(10, activation='linear' ) ) model.add( Dense(1, activation='linear' ) ) #Converting curvature to angle, assuming wheelbase of 2 meters, then going from rad to deg #The network output was supposed to be 1/R (r), the function then convert it to steering angle (alpha) [deg] # alpha = atan(l*r)*57.3. l = wheelbase, supossed to be 2 meters model.add( Lambda( lambda x: tf.multiply( tf.atan( tf.multiply( x, 2 ) ), 57.3 ) ) ) opt = keras.optimizers.Adam(learning_rate=lr ) model.compile( loss='mse', optimizer=opt ) return model def ModNVIDIANetV3( lr=1e-3): model = Sequential( name = "ModNVIDIANetV3" ) model.add( Lambda( lambda x: (x/255.0) - 0.5, input_shape=( 160, 320, 3 ) ) ) model.add( Cropping2D( cropping=( (70,25), (0,0) ) ) ) #Keeping padding as "same" and applygin a max model.add( Conv2D( 24, 5, 1, activation='relu', padding='same' ) ) model.add( MaxPool2D( ) ) model.add( Conv2D( 36, 5, 1, activation='relu', padding='same' ) ) model.add( MaxPool2D( ) ) model.add( Conv2D( 48, 5, 1, activation='relu', padding='same' ) ) model.add( MaxPool2D( ) ) model.add( Conv2D( 64, 3, 1, activation='relu', padding='same' ) ) model.add( MaxPool2D( ) ) model.add( Conv2D( 64, 3, 1, activation='relu', padding='same' ) ) model.add( MaxPool2D( pool_size=(4, 2) ) ) #forcing to this output to become an "flat" model.add( Flatten( ) ) model.add( Dense(100, activation='tanh' ) ) model.add( Dropout(0.5) ) model.add( Dense(50, activation='tanh' ) ) model.add( Dropout(0.25) ) model.add( Dense(10, activation='tanh' ) ) model.add( Dense(1, activation='linear') ) #Converting curvature to angle, assuming wheelbase of 2 meters, then going from rad to deg #The network output was supposed to be 1/R (r), the function then convert it to steering angle (alpha) [deg] # alpha = atan(l*r)*57.3. l = wheelbase, supossed to be 2 meters model.add( Lambda( lambda x: tf.multiply( tf.atan( tf.multiply( x, 2 ) ), 57.3 ) ) ) opt = keras.optimizers.Adam(learning_rate=lr ) model.compile( loss='mse', optimizer=opt ) return model #Hyper parameters BATCH_SIZE=64 LEARNING_RATE=1e-4 EPOCHS=5 model_name = sys.argv[1] model = Sequential() if( model_name == 'NVIDIANetV0'): model = NVIDIANetV0( LEARNING_RATE ) elif( model_name == 'NVIDIANetV1'): model = NVIDIANetV1( LEARNING_RATE ) elif( model_name == 'NVIDIANetV2' ): model = NVIDIANetV2( LEARNING_RATE ) elif( model_name == 'NVIDIANetV3' ): model = NVIDIANetV3( LEARNING_RATE ) elif( model_name == 'NVIDIANetV4' ): model = NVIDIANetV4( LEARNING_RATE ) elif( model_name == 'NVIDIANetV5' ): model = NVIDIANetV5( LEARNING_RATE ) elif( model_name == 'NVIDIANetV6' ): model = NVIDIANetV6( LEARNING_RATE ) elif( model_name == 'ModNVIDIANetV1' ): model = ModNVIDIANetV1( LEARNING_RATE ) elif( model_name == 'ModNVIDIANetV2' ): model = ModNVIDIANetV2( LEARNING_RATE ) elif( model_name == 'ModNVIDIANetV3' ): model = ModNVIDIANetV3( LEARNING_RATE ) else: raise Exception('Invalid model name') #Load data. Split data into train and validation df = pd.read_csv('data/driving_log.csv', names=['center', 'left', 'right', 'measurement', '1', '2', '3']) rng =
RandomState()
numpy.random.RandomState
import unittest import numpy as np import PySeismoSoil.helper_generic as hlp import os from os.path import join as _join f_dir = _join(os.path.dirname(os.path.realpath(__file__)), 'files') class Test_Helper_Generic(unittest.TestCase): def test_is_int(self): self.assertTrue(hlp.is_int(3)) self.assertTrue(hlp.is_int(np.array([3])[0])) self.assertTrue(hlp.is_int(3.0)) self.assertTrue(hlp.is_int(np.array([3.0])[0])) self.assertFalse(hlp.is_int(3.1)) self.assertFalse(hlp.is_int(np.array([3.1])[0])) self.assertFalse(hlp.is_int(None)) self.assertFalse(hlp.is_int(np.array([]))) self.assertFalse(hlp.is_int(np.array([3]))) def test_read_two_column_stuff(self): # Load from file data, dt = hlp.read_two_column_stuff(_join(f_dir, 'two_column_data_example.txt')) benchmark = np.array( [[.1, .2, .3, .4, .5, .6, .7, .8, .9, 1.0, 1.1, 1.2, 1.3, 1.4, 1.5], [1, 2, 3, 4, 5, 2, 3, 4, 5, 6, 3, 4, 5, 6, 7]] ).T self.assertTrue(np.allclose(data, benchmark)) self.assertAlmostEqual(dt, benchmark[1, 0] - benchmark[0, 0]) # Load from 1D numpy array data_1col = np.array([1, 2, 3, 4, 5, 2, 3, 4, 5, 6, 3, 4, 5, 6, 7]) dt = 0.1 data_, dt_ = hlp.read_two_column_stuff(data, dt) self.assertTrue(np.allclose(data_1col, data_[:, 1])) self.assertAlmostEqual(dt, dt_) # Load from 2D numpy array data__, dt__ = hlp.read_two_column_stuff( benchmark, benchmark[1, 0] - benchmark[0, 0], ) self.assertTrue(np.allclose(data__, benchmark)) self.assertAlmostEqual(dt__, benchmark[1, 0] - benchmark[0, 0]) def test_check_two_column_format(self): with self.assertRaisesRegex(TypeError, '1.5 should be a numpy array.'): hlp.check_two_column_format(1.5, '1.5') with self.assertRaisesRegex(TypeError, '_a_ should be a 2D numpy array.'): hlp.check_two_column_format(np.array([1, 2, 3]), '_a_') with self.assertRaisesRegex(TypeError, '_b_ should have two columns.'): hlp.check_two_column_format(np.ones((2, 3)), '_b_') def test_find_closest_index(self): array = [1, 2, 3] value = 3 with self.assertRaisesRegex(TypeError, 'must be a 1D numpy array.'): hlp.find_closest_index(array, value) array = np.array([1]) value = 5 self.assertTrue(np.allclose(hlp.find_closest_index(array, value), [0, 1])) array =
np.array([4, 3, 2, 1, 5, 7, 9])
numpy.array
# -*- coding: utf-8 -*- ############################################################################## # LMA: A Python Library for generating FT-spectra from # Molecular Dynamics Trajectories. # # Copyright 2017-2018 # Ruhr-University-Bochum Institute of biophysics and the Author # # Author: <NAME> # # LMA is free software: # Permission is hereby granted, free of charge, to any person obtaining a # copy of this software and associated documentation files (the "Software"), # to deal in the Software without restriction, including without limitation # the rights to use, copy, modify, merge, publish, distribute, sublicense, # and/or sell copies of the Software, and to permit persons to whom the # Software is furnished to do so, subject to the following conditions: # # The above copyright notice and this permission notice shall be included in # all copies or substantial portions of the Software. # # THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR # IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, # FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL # THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR # OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, # ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR # OTHER DEALINGS IN THE SOFTWARE. ############################################################################## import numpy as np import matplotlib as mpl mpl.use("Agg") import matplotlib.pyplot as plt fig_size = plt.rcParams["figure.figsize"] fig_size[0] = 16 fig_size[1] = 8 plt.rcParams['lines.linewidth'] = 3.0 import os from lma_core import get_band_pass_filter_traj as bpfilter import mdtraj def rotate(Mover, Target): Cov = np.dot(np.transpose(Mover), Target) Vmat, Smat, Wmat = np.linalg.svd(Cov) decide_not_rh = (np.linalg.det(Vmat) * np.linalg.det(Wmat)) < 0.0 if decide_not_rh: Smat[-1] = -Smat[-1] Vmat[:,-1] = -Vmat[:,-1] RotMatrix = np.dot(Vmat, Wmat) return np.dot(Mover, RotMatrix) class OutputWriter: def __init__(self, proc, args): self.proc = proc self.args = args if not self.args.bpf: np.save(self.args.out+'wavenum.npy', self.proc.freq) np.savetxt(self.args.out+'wavenum.txt', self.proc.freq) if self.args.n_time_windows > 1: with open(self.args.out+'time_windows.info', 'w') as outStream: for idx, tw in enumerate(self.proc.TWSlices): outStream.write('{} {}\n'.format(*tw)) if self.args.atom_spec: with open(self.args.out+'atoms.info', 'w') as outStream: for idx, atm in enumerate(self.proc.loader.name_data): outStream.write('{}\n'.format(atm)) if self.args.mode_spec: if self.proc.Bonds is not None: with open(self.args.out+'bonds.info', 'w') as outStream: for idx, bnd in enumerate(self.proc.Bonds): outStream.write('{} {}\n'.format(*bnd)) def write(self): if not self.args.bpf: if self.args.spec: outarr = np.concatenate((self.proc.freq[:,np.newaxis], self.proc.allspec.sum(1)[:,np.newaxis]), axis=1) if self.args.save_txt: np.savetxt(self.args.out+'fullspec.txt', outarr) if self.args.save_npy: np.save(self.args.out+'fullspec.npy', outarr) if self.args.atom_spec: outarr = np.concatenate((self.proc.freq[:,np.newaxis], self.proc.allspec), axis=1) if self.args.save_txt: np.savetxt(self.args.out+'atomspec.txt', outarr) if self.args.save_npy: np.save(self.args.out+'atomspec.npy', outarr) if self.args.mode_spec: if self.proc.loader.TRAJ is not None: outarr_b = np.concatenate((self.proc.freq[:,np.newaxis], self.proc.spec_b), axis=1) outarr_p = np.concatenate((self.proc.freq[:,np.newaxis], self.proc.spec_p), axis=1) outarr_n = np.concatenate((self.proc.freq[:,np.newaxis], self.proc.spec_n), axis=1) if self.args.save_txt: np.savetxt(self.args.out+'modespec_b.txt', outarr_b) np.savetxt(self.args.out+'modespec_p.txt', outarr_p) np.savetxt(self.args.out+'modespec_n.txt', outarr_n) if self.args.save_npy: np.save(self.args.out+'modespec_b.npy', outarr_b) np.save(self.args.out+'modespec_p.npy', outarr_p) np.save(self.args.out+'modespec_n.npy', outarr_n) if self.args.bpf: print('\tgenerating bpf trajectory...') BPF_TRAJ = bpfilter(self.proc.loader.TRAJ, self.args.dt, *self.args.bpf_range, scale=self.args.fscale) par = int(round(self.args.bpf_part*BPF_TRAJ.n_frames)) BPF_TRAJ.center_coordinates(mass_weighted=True) BPF_TRAJ = BPF_TRAJ[par:-par] for ii in range(1, BPF_TRAJ.n_frames): BPF_TRAJ.xyz[ii,:,:] = rotate(BPF_TRAJ.xyz[ii,:,:], BPF_TRAJ.xyz[0,:,:]) BPF_TRAJ[0].save_pdb(self.args.out+'traj.pdb') BPF_TRAJ.save_dcd(self.args.out+'traj.dcd') for pii in range(int(np.ceil(BPF_TRAJ.n_frames/self.args.bpf_length))): BPF_TRAJ[pii*self.args.bpf_length:(pii+1)*self.args.bpf_length].save_pdb( self.args.out+'traj({}-{})_({}_{}).pdb'.format( int(round(self.args.bpf_range[0])), int(round(self.args.bpf_range[1])), pii*self.args.bpf_length+par, (pii+1)*self.args.bpf_length+par)) def plot(self): if not self.args.bpf: if self.args.spec_plot: plt.plot(self.proc.freq, self.proc.allspec.sum(1)) plt.savefig(self.args.out+'fullspec.png') plt.cla() if self.args.atom_spec_plot: print('\tplotting spectra...') for atm_idx in range(self.proc.allspec.shape[1]): plt.plot(self.proc.freq, self.proc.allspec[:,atm_idx], label=self.proc.loader.name_data[atm_idx]) plt.legend() plt.savefig(self.args.out+'atomspec_{}.png'.format(self.proc.loader.name_data[atm_idx])) plt.cla() if self.args.mode_spec_plot: if self.proc.loader.TRAJ is not None: print('\tplotting modes...') for bnd_idx in range(len(self.proc.Bonds)): plt.plot(self.proc.freq, self.proc.spec_b[:,bnd_idx], label='b_'+self.proc.Bond_names[bnd_idx]) plt.legend() plt.savefig(self.args.out+'modespec_b_{}.png'.format(self.proc.Bond_names[bnd_idx])) plt.cla() plt.plot(self.proc.freq, self.proc.spec_p[:,bnd_idx], label='p_'+self.proc.Bond_names[bnd_idx]) plt.legend() plt.savefig(self.args.out+'modespec_p_{}.png'.format(self.proc.Bond_names[bnd_idx])) plt.cla() plt.plot(self.proc.freq, self.proc.spec_n[:,bnd_idx], label='n_'+self.proc.Bond_names[bnd_idx]) plt.legend() plt.savefig(self.args.out+'modespec_n_{}.png'.format(self.proc.Bond_names[bnd_idx])) plt.cla() def write_tw(self): if not self.args.bpf: if self.args.save_npy: if self.args.spec: spec = np.zeros((len(self.proc.allspec_tw), self.proc.allspec_tw[0].shape[0], 1)) for idx, tw in enumerate(self.proc.TWSlices): spec[idx,:,0] += self.proc.allspec_tw[idx].sum(1) np.save(self.args.out+'fullspec_tw.npy', spec) if self.args.atom_spec: atom_spec = np.zeros((len(self.proc.allspec_tw), *self.proc.allspec_tw[0].shape)) for idx, tw in enumerate(self.proc.TWSlices): atom_spec[idx,:,:] = self.proc.allspec_tw[idx]
np.save(self.args.out+'atomspec_tw.npy', atom_spec)
numpy.save
import multiprocessing from joblib import Parallel, delayed import timeit import logging import numpy as np from collections import Counter class Ranker: @staticmethod def rank_all_hands(hand_combos, return_all=False): # start = timeit.default_timer() rank_res_arr = np.zeros(shape=(hand_combos.shape[1], hand_combos.shape[0])) # if hand_combos.shape[0] >= 100000 and hand_combos.shape[1] > 1: # Parallel(n_jobs=multiprocessing.cpu_count(), backend="threading")\ # (delayed(Ranker.parallel_rank_hand)(sce, hand_combos, rank_res_arr) for sce in range(hand_combos.shape[1])) # else: for sce in range(hand_combos.shape[1]): Ranker.parallel_rank_hand(sce, hand_combos, rank_res_arr) # end = timeit.default_timer() # logging.info(f"Ranking all hands time cost: {end - start}") if return_all: return rank_res_arr else: return
np.max(rank_res_arr, axis=0)
numpy.max
#%% # from tqdm import tqdm import time import os import numpy as np import cv2 from PIL import Image from utils import get_random_data, get_random_data_with_Mosaic from matplotlib import pyplot as plt def rand(a=0.0, b=1.0): return np.random.rand()*(b-a) + a #---------------------------------------------------# # 获得类和先验框 #---------------------------------------------------# def get_classes(classes_path): '''loads the classes''' with open(classes_path) as f: class_names = f.readlines() class_names = [c.strip() for c in class_names] return class_names def get_anchors(anchors_path): '''loads the anchors from a file''' with open(anchors_path) as f: anchors = f.readline() anchors = [float(x) for x in anchors.split(',')] return np.array(anchors).reshape(-1, 2) #---------------------------------------------------# # 训练数据生成器 #---------------------------------------------------# def data_generator(annotation_lines, batch_size, input_shape, anchors, num_classes, mosaic=False): '''data generator for fit_generator''' n = len(annotation_lines) i = 0 flag = True while True: image_data = [] box_data = [] for b in range(batch_size): if i==0: np.random.shuffle(annotation_lines) if mosaic: if flag and (i+4) < n: image, box = get_random_data_with_Mosaic(annotation_lines[i:i+4], input_shape) i = (i+1) % n else: image, box = get_random_data(annotation_lines[i], input_shape) i = (i+1) % n flag = bool(1-flag) else: image, box = get_random_data(annotation_lines[i], input_shape) i = (i+1) % n image_data.append(image) box_data.append(box) image_data = np.array(image_data) box_data =
np.array(box_data)
numpy.array
# ================================================== # # Copyright (c) 2018, Alibaba Inc. # All Rights Reserved. # # ================================================== # -*- coding: utf-8 -*- """ EvaluationMetrics class for evaluating input data. Currently supported evaluation metrics: map,auc,mse,accuracy,ndcg@k,precision@k,recall@k Created on Tues Apr 10 11:05:11 2018 """ from __future__ import print_function import random import numpy as np import math def _to_list(x): if isinstance(x, list): return x return [x] def corr(y_true, y_pred): from scipy import stats corr, pv = stats.pearsonr(y_pred, y_true) if np.isnan(corr): return 0.0 else: return corr def auc(y_true, y_pred): from sklearn import metrics try: auc = metrics.roc_auc_score(y_true.astype(int), y_pred) except Exception as e: print("compute auc exception", e) return 0.0 return auc def map(y_true, y_pred, rel_threshold=0): s = 0. y_true = _to_list(np.squeeze(y_true).tolist()) y_pred = _to_list(
np.squeeze(y_pred)
numpy.squeeze
from shapely.geometry import LineString, MultiLineString import numpy as np import math class CurveDetector(object): """ Class for detecting curves along polylines based on geometric features of rays, arcs, and complex segments. To-do ----- - Deal with adjacent curves/reverse curves - Minimum points/length for curve definition - Add point/length buffer - Full curve radius estimate """ def __init__(self, line): # Log parameters self.line = line # Initialize fitting properties self._segment_mask = None @property def line(self): return self._line @line.setter def line(self, line): if not isinstance(line, (LineString, MultiLineString)): raise TypeError("Input line must be valid shapely linear geometry.") else: self._line = line @property def segment_mask(self): """ A boolean array mask indicating which 4-point segments have been detected to be part of a fitted curve. """ return self._segment_mask @property def point_mask(self): """ A boolean array mask indicating which points have been detected to be part of a fitted curve """ size = self.size mask = np.zeros(size, dtype=bool) for i in range(4): mask[i:size+i-3] = mask[i:size+i-3] | self.segment_mask return mask @property def point_map(self): """ Array of values indicating which points are associated with which curves. Points with a value of 0 are not associated with any unique fitted curve. """ mask = self.point_mask res = (np.append([True], np.diff(mask * 1) > 0) * mask).cumsum() * mask return res @property def curves(self): """ A list of shapely LineStrings for fitted curves. """ # Iterate through unique curve numbers point_map = self.point_map lines = [] for num in np.unique(point_map)[1:]: # Get mask for curve number mask = point_map == num # Create curve linestring lines.append(LineString(list(zip(self.xs[mask], self.ys[mask])))) return lines @property def size(self): return len(self.xs) @property def xs(self): # Compute x values xs = np.array(self.line.xy[0], dtype=float) return xs @property def ys(self): # Compute x values ys = np.array(self.line.xy[1], dtype=float) return ys @property def dx(self): """ X-dimension distance between adjacent points. Size = n - 1 """ dx = np.diff(self.xs) return dx @property def dy(self): """ Y-dimension distance between adjacent points. Size = n - 1 """ dy = np.diff(self.ys) return dy @property def bearing(self): """ Bearing of the ray defined by two adjacent points. Size = n - 1 """ bearing = np.arctan2(self.dy, self.dx) return bearing @property def ray_length(self): """ Length of the ray defined by two adjacent points. Size = n - 1 """ ray_length = (self.dx ** 2 + self.dy ** 2) ** 0.5 return ray_length @property def relangle(self): """ Relative angle between two adjacent rays. Size = n - 2 """ relangle =
np.diff(self.bearing)
numpy.diff
""" analysis.py Module for manipulating data from QuantumEspresso Output after Parsing Contains all functions for calculating Born Effective Charges """ import numpy as np import pandas as pd from pybec import utils import dask.array as da from pybec import parsers from scipy.spatial import ConvexHull from pykrige.rk import Krige from pykrige.uk3d import UniversalKriging3D from pykrige.compat import GridSearchCV from sklearn.gaussian_process import GaussianProcessRegressor from sklearn.gaussian_process.kernels import RationalQuadratic as RQ, ConstantKernel as C from scipy.interpolate import Rbf from scipy.interpolate import NearestNDInterpolator as NND from scipy.interpolate import LinearNDInterpolator as LND import logging log = logging.getLogger(__name__) #log.setLevel(logging.DEBUG) A_TO_B = 0.529177249 def get_full_pol(directory): """ Gets the trajectory of the polarization. Parameters ---------- directory : str The path to a directory containing all of the output files to parse for polarization data. Returns ------- numpy.ndarray Nx2 array with the first column containing the time and second column containing the overall polarization. Duplicate timesteps are removed during processing. """ pols = {} files = glob.glob(os.path.join(directory, '*')) files.sort(key=lambda x: int(x.split('.')[-1])) for file in files: _, pol = parsers.get_dipole(file) if len(pol): for i, p in enumerate(pol): pols[pol[i, 0]] = pol[i] pols = OrderedDict(sorted(pols.items())) pols = np.concatenate([pols[step].reshape(1,-1) for step in pols], axis=0) time = (np.cumsum(pols[:, 1]) - pols[0, 1] + pols[0,0] * pols[0, 1]).reshape(-1,1) return np.concatenate([time, pols[:, -1].reshape(-1,1)], axis=1) def find_jumps(arr, thresh=10): """ Detect where the trajectory has anomolous values. Parameters ---------- arr : numpy.ndarray Nx0 array of values to check for outliers Returns ------- np.ndarray Array of indices in which input array has a value larger than thresh """ return np.nonzero(np.abs(arr) > thresh)[0] def correct_jumps(arr, x=None, jump_quantum=None, jump_threshold=10.): """ Correct discontinuities in trajectory Either corrects using a best guess to align the slope at the discontinuity with the slope on either side of the discontinuity or using a specified jump size. An integer multiple of this jump is added to the trajectory after the discontinuity to match it closely with the trajectory before. Parameters ---------- arr : numpy.ndarray Nx0 array of values in the trajectory of some variable. x : numpy.ndarray, optional, default=None Nx0 array defining the spacing between values in the trajectory for calculation of slope. If None, a uniform spacing of 1 is assumed. jump_quantum : float, optional, default=None This optionally forces the correction added post-discontinuity to be an integer multiple of this jump_quantum size. jump_threshold : float, optional, default=10. Sets the sensitivity for detecting jumps. Larger value increases sensitivity and will try to correct smaller jumps. Returns ------- np.ndarray Nx0 array of original values, with jumps corrected. """ arr = np.copy(arr) dv = arr[1:] - arr[0:-1] if x is None: x = np.arange(1, len(arr)+1) dx = x[1:] - x[0:-1] scaled_dv = dv / dx for idx in find_jumps(scaled_dv, thresh=jump_threshold): jump = dv[idx] run = dx[idx] if jump_quantum is not None: n = round(jump/jump_quantum) # correct the elements following the jump arr[idx+1:] -= n * jump_quantum else: ave_dv_dx = (scaled_dv[idx+1] + scaled_dv[idx-1]) / 2 rise = ave_dv_dx * run arr[idx+1:] += (-jump + rise) return arr def correct_jumps_between_arr(arr1, arr2, jump_quantum): """ Shift the start value of one array to align with the end value of another. Parameters ---------- arr1 : numpy.ndarray Nx0 array of values in the trajectory of some variable. arr2 : numpy.ndarray Mx0 array of values in the trajectory of some variable. The function will shift all values in this array such that its start aligns with the end of arr1. jump_quantum : float The shift added to arr2 will be an integer multiple of this jump_quantum size. Returns ------- np.ndarray Mx0 array of shifted arr2 values. """ jump = arr2[0] - arr1[-1] n = round(jump/jump_quantum) # correct the elements following the jump arr2 -= n * jump_quantum return arr2 def volume(lattice): """ Calculate the volume of a 3D unit cell. Parameters ---------- lattice : numpy.ndarray 3 x 3 array with the unit cell vectors as the rows. That is numpy.array([[a1, a2, a3], [b1, b2, b3], [c1, c2, c3]]) Returns ------- float Volume of unit cell, calculated as (a x b) * c """ return np.dot(np.cross(lattice[0], lattice[1]), lattice[2]) def get_centroid(atoms_dict, key='all'): """ Calculate the centroid of the atoms of a certian element in a unit cell. Parameters ---------- atoms_dict : dict dictionary of atomic coordinates in Angstroms, where the keys are the element symbols and the values are the numpy coordinate array for all atoms of that element. key : str the symbol of the element you would like to calculate the centroid for. If 'all' is given, the centroid of the entire unit cell will be computed. Returns ------- numpy.ndarray a numpy array of the x,y, and z coordinates (in Angstroms) of the centroid. """ if key == 'all': # get the centroid of all atoms in the coordinates dict requested_atoms = np.concatenate([atoms_dict[key] for key in atoms_dict], axis=0) else: requested_atoms = atoms_dict[key] return np.mean(requested_atoms, axis=0) def get_spherical_coords_to_centroid(atoms_dict, centroid): """ Calculate the centroid of the atoms of a certian element in a unit cell. Parameters ---------- atoms_dict : dict Dictionary of atomic coordinates in Angstroms, where the keys are the element symbols and the values are the numpy coordinate array for all atoms of that element. centroid : str Numpy array of the x,y, and z coordinates (in Angstroms) of the centroid. Returns ------- r : dict Dictionary of the distances of each ion in unit cell to the specified centroid. The keys are the element symbols and the values are numpy.ndarrays of the distances for each ion. phi : dict Dictionary of the polar angle of each ion in unit cell with reference to an origin at the specified centroid. theta : dict Dictionary of the azimuthal angle of each ion in unit cell with reference to an origin at the specified centroid. """ r = {} phi = {} theta = {} for key in atoms_dict: r[key] = np.array([np.linalg.norm(pos - centroid) for pos in atoms_dict[key]]) phi[key] = np.array([np.arccos((pos - centroid)[2] / r_) for pos, r_ in zip(atoms_dict[key], r[key])]) theta[key] = np.array([np.arctan2((pos - centroid)[1], (pos - centroid)[0]) for pos in atoms_dict[key]]) theta[key][theta[key] < 0] += 2 * np.pi return r, phi, theta def get_dist_to_centroid(atoms_dict, centroid): """ Calculate the centroid of the atoms of a certian element in a unit cell. Parameters ---------- atoms_dict : dict Dictionary of atomic coordinates in Angstroms, where the keys are the element symbols and the values are the numpy coordinate array for all atoms of that element. centroid : str Numpy array of the x,y, and z coordinates (in Angstroms) of the centroid. Returns ------- dict Dictionary of the distances of each ion in unit cell to the specified centroid. The keys are the element symbols and the values are numpy.ndarrays of the distances for each ion. """ dist_to_centroid = {} for key in atoms_dict: dist_to_centroid[key] = np.array([np.linalg.norm(pos - centroid) for pos in atoms_dict[key]]) return dist_to_centroid def get_BECs(for_0, for_1, e_field, e_field_direction): """ Calculate the born effective charges for an array of ions. Parameters ---------- for_0 : dict Ionic forces in zero field in a dictionary where the keys are the element symbols and the values are the numpy force array for all atoms of that element. for_1 : dict Ionic forces in applied efield but with clamped ions in a dictionary formatted like for_0. e_field : float The magnitude of the applied electric field. e_field_direction : list The 3D vector direction of the efield. Ex: [0,0,1] is an electric field in the positive z-direction. """ BEC = {} e_field_direction = np.array(e_field_direction) / np.linalg.norm(np.array(e_field_direction)) # make sure the parsed forces have matching elements if set(for_0.keys()) != set(for_1.keys()): raise ValueError('Different elements present in the two provided files.') # get the Born Effective Charge using the finite difference between 0 field and clamped ion for key in for_0: if len(for_0[key]) != len(for_1[key]): raise ValueError('Provided files have different number of {} atoms'.format(key)) BEC[key] = (for_1[key].dot(e_field_direction) - for_0[key].dot(e_field_direction)) / e_field return BEC def infer_local_field(for_0, for_1, z_exp, e_ext=0.001, e_field_direction=[0, 0, 1]): """ Calculate the born effective charges for an array of ions. Parameters ---------- for_0 : dict Ionic forces in zero field in a dictionary where the keys are the element symbols and the values are the numpy force array for all atoms of that element. for_1 : dict Ionic forces in applied efield but with clamped ions in a dictionary formatted like for_0. z_exp : dict Expected born effective charge for each element type from a matrix-only calculation. Keys are element symbols, and values are expected BECs. e_ext : float, optional, default: 0.001 The magnitude of the applied electric field (au). e_field_direction : list, optional, default: [0,0,1] The 3D vector direction of the efield. Ex: [0,0,1] is an electric field in the positive z-direction. """ e_loc = {} e_field_direction = np.array(e_field_direction) / np.linalg.norm(np.array(e_field_direction)) # make sure the parsed forces have matching elements if set(for_0.keys()) != set(for_1.keys()): raise ValueError('Different elements present in the two provided files.') # get the Born Effective Charge using the finite difference between 0 field and clamped ion for key in for_0: if len(for_0[key]) != len(for_1[key]): raise ValueError('Provided files have different number of {} atoms'.format(key)) e_loc[key] = (for_1[key].dot(e_field_direction) - for_0[key].dot(e_field_direction)) / z_exp[key] - e_ext return e_loc def infer_e_field(for_0, for_1, z_exp, e_field_direction=[0, 0, 1]): """ Calculate the born effective charges for an array of ions. Parameters ---------- for_0 : dict Ionic forces in zero field in a dictionary where the keys are the element symbols and the values are the numpy force array for all atoms of that element. for_1 : dict Ionic forces in applied efield but with clamped ions in a dictionary formatted like for_0. z_exp : dict Expected born effective charge for each element type from a matrix-only calculation. Keys are element symbols, and values are expected BECs. e_field_direction : list, optional, default: [0,0,1] The 3D vector direction of the efield. Ex: [0,0,1] is an electric field in the positive z-direction. """ e_loc = {} e_field_direction = np.array(e_field_direction) / np.linalg.norm(np.array(e_field_direction)) # make sure the parsed forces have matching elements if set(for_0.keys()) != set(for_1.keys()): raise ValueError('Different elements present in the two provided files.') # get the Born Effective Charge using the finite difference between 0 field and clamped ion for key in for_0: if len(for_0[key]) != len(for_1[key]): raise ValueError('Provided files have different number of {} atoms'.format(key)) e_loc[key] = (for_1[key].dot(e_field_direction) - for_0[key].dot(e_field_direction)) / z_exp[key] return e_loc def get_field_along_d(field_dict, sub_mean_field=False, e_field=0.25, e_field_direction=[0, 0, 1]): """ Calculate the electric field along a specific direction from the FE results. Parameters ---------- field_dict : dict Electric field at atomic locations in a dictionary where the keys are the element symbols and the values are the numpy array of the electric field for all atoms of that element. sub_mean_field : bool, optional If set, the external applied field is subtracted from the calculated fields, meaning that only the local field disturbance caused by the inclusion will be plotted. Defaults to False. e_field : float The magnitude of the applied electric field in V/m. e_field_direction : list The 3D vector direction of the efield. Ex: [0,0,1] is an electric field in the positive z-direction. Returns ------- field : dict Electric field magnitude along the specified direction at atomic locations in a dictionary with same format as field_dict. """ field = {} e_field_direction = np.array(e_field_direction) / np.linalg.norm(np.array(e_field_direction)) for key in field_dict: if sub_mean_field: field_dict[key] = field_dict[key] - (e_field * e_field_direction) field[key] = field_dict[key].dot(e_field_direction.T) return field def to_Bohr(coords): """Convert a coordinate dictionary from Angstroms to Bohr""" for key in coords: coords[key] = coords[key] / A_TO_B return coords def get_dipole_field(coords, dipole_loc=[0, 0, 0], p_vec=[0, 0, 1], p=1, is_angstrom=True): """ Returns the electric field from a point dipole. Parameters ---------- coords : dict Dictionary of atomic coordinates, where the keys are the element symbols, and the values are the numpy coordinate array for all atoms of that element. dipole_loc : list or numpy.ndarray The 3D coordinates of the dipole location. Ex: dipole_loc=get_centroid(coords, key='Ag') dipole_loc : list or numpy.ndarray The 3D coordinates of the dipole location. Ex: dipole_loc=get_centroid(coords, key='Ag') is_angstrom : bool, optional, default : True Indicates whether the input atomic coordinates are in Angstroms (if False, Bohr is assumed) Returns ------- field : dict Electric field at atomic locations in a dictionary with same format as coords. """ dipole_loc = np.array(dipole_loc) p_vec = np.array(p_vec) # verify that it is normalized first p_vec = p_vec / np.linalg.norm(p_vec) p_vec = p * p_vec # make sure everything is in atomic units if is_angstrom: coords = to_Bohr(coords) dipole_loc = dipole_loc / A_TO_B ions = utils.as_dataframe(coords) field = {} for key in coords: r_vec = ions.loc[ions['element'] == key][['X', 'Y', 'Z']].values - dipole_loc r_mag = np.linalg.norm(r_vec, axis=1).reshape(-1, 1) r_unit = r_vec / r_mag field[key] = 1 / r_mag ** 3 * (np.dot(r_unit, 3 * p_vec.T).reshape(-1, 1) * r_unit - p_vec) return field def get_dipole_field_displaced(coords, dipole_loc=[0, 0, 0], p_vec=[0, 0, 1], q=1, d=0.1, is_angstrom=True): """ Returns the electric field from a point dipole. Parameters ---------- coords : dict Dictionary of atomic coordinates, where the keys are the element symbols, and the values are the numpy coordinate array for all atoms of that element. dipole_loc : list or numpy.ndarray The 3D coordinates of the dipole location. Ex: dipole_loc=get_centroid(coords, key='Ag') is_angstrom : bool, optional, default : True Indicates whether the input atomic coordinates are in Angstroms (if False, Bohr is assumed) Returns ------- field : dict Electric field at atomic locations in a dictionary with same format as coords. """ dipole_loc = np.array(dipole_loc) p_vec = np.array(p_vec) # verify that it is normalized first p_vec = p_vec / np.linalg.norm(p_vec) # make sure everything is in atomic units if is_angstrom: coords = to_Bohr(coords) dipole_loc = dipole_loc / A_TO_B ions = utils.as_dataframe(coords) field = {} for key in coords: ppos = dipole_loc + d / 2 * p_vec pneg = dipole_loc - d / 2 * p_vec r_pos = ions.loc[ions['element'] == key][['X', 'Y', 'Z']].values - ppos r_pos_mag = np.linalg.norm(r_pos, axis=1).reshape(-1, 1) r_neg = ions.loc[ions['element'] == key][['X', 'Y', 'Z']].values - pneg r_neg_mag = np.linalg.norm(r_neg, axis=1).reshape(-1, 1) r_pos_unit = r_pos / r_pos_mag r_neg_unit = r_neg / r_neg_mag pos_field = q / r_pos_mag ** 2 * r_pos_unit neg_field = -q / r_neg_mag ** 2 * r_neg_unit field[key] = pos_field + neg_field return field def gen_BEC_df(no_efield, clamped_ion, xyz, e_field=0.001, e_field_direction=[0, 0, 1], add_forces=False): """ Generate a pandas dataframe containing the Born Effective Charges of the ions in the unit cell Parameters ---------- no_efield : string File path of QE output file containing the polarization with no applied electric field clamped_ion : string File path of QE output file containing the polarization with applied electric field but ions clamped in place xyz : string File path of .xyz - formatted coordinates of unit cell e_field : float, optional, default=0.001 Electric field strength in au. e_field_direction : list, optional, default=[0, 0, 1] Vector of the electric field direction. In positive z-direction by default add_forces : bool, optional, default=False If True, include the forces on the ions before and after electric field applied to the output dataframe Returns ------- pandas.Dataframe Dataframe of ionic coordinates and Born effective charges. Columns are ["Element", "X", "Y", "Z", "BEC"], with optional "Force0", "Force1". """ # parse coordinates coords = parsers.get_coordinates(xyz) # parse forces for_0, for_1 = parsers.get_converged_forces(no_efield), parsers.get_converged_forces(clamped_ion) # calculate Born Effective Charges BEC = get_BECs(for_0, for_1, e_field, e_field_direction) if add_forces: return utils.as_dataframe(coords, BEC, for_0, for_1) else: return utils.as_dataframe(coords, BEC) def ave_BEC_dict(elements, BECs): """ Create a dictionary where the keys are the element symbols and the values are the average Born Effective Charges for that element. """ elements, BECs = (list(elements), list(BECs)) BEC_dict = {el: [] for el in elements} for element, BEC in zip(elements, BECs): BEC_dict[element].append(BEC) for key in BEC_dict: BEC_dict[key] = np.mean(BEC_dict[key]) return BEC_dict def point_in_hull(point, hull, tolerance=1e-12, inc=False): """https://stackoverflow.com/questions/16750618/whats-an-efficient-way-to-find-if-a-point-lies-in-the-convex-hull-of-a-point-cl/42165596#42165596""" if not isinstance(hull, ConvexHull): hull = ConvexHull(hull) if inc: return all((
np.dot(eq[:-1], point)
numpy.dot
from __future__ import print_function import time import numpy import numpy as np import torch import tqdm from evaluate_utils.dcg import DCG from models.loss import order_sim, AlignmentContrastiveLoss from utils import get_model, AverageMeter, LogCollector from data import get_coco_image_retrieval_data, get_test_loader def encode_data(model, data_loader, log_step=10, logging=print): """ Encode all images and captions loadable by `data_loader` """ batch_time = AverageMeter() val_logger = LogCollector() # switch to evaluate mode model.eval() end = time.time() # numpy array to keep all the embeddings img_embs = None cap_embs = None img_lengths = [] cap_lengths = [] # compute maximum lenghts in the whole dataset max_cap_len = 88 max_img_len = 37 # for _, _, img_length, cap_length, _, _ in data_loader: # max_cap_len = max(max_cap_len, max(cap_length)) # max_img_len = max(max_img_len, max(img_length)) for i, (images, targets, img_length, cap_length, boxes, ids) in enumerate(data_loader): # make sure val logger is used model.logger = val_logger if type(targets) == tuple or type(targets) == list: captions, features, wembeddings = targets # captions = features # Very weird, I know text = features else: text = targets captions = targets # compute the embeddings with torch.no_grad(): _, _, img_emb, cap_emb, cap_length = model.forward_emb(images, text, img_length, cap_length, boxes) # initialize the numpy arrays given the size of the embeddings if img_embs is None: # N x max_len x 1024 img_embs = torch.zeros((len(data_loader.dataset), max_img_len, img_emb.size(2))) cap_embs = torch.zeros((len(data_loader.dataset), max_cap_len, cap_emb.size(2))) # preserve the embeddings by copying from gpu and converting to numpy img_embs[ids, :img_emb.size(0), :] = img_emb.cpu().permute(1, 0, 2) cap_embs[ids, :cap_emb.size(0), :] = cap_emb.cpu().permute(1, 0, 2) img_lengths.extend(img_length) cap_lengths.extend(cap_length) # measure accuracy and record loss # model.forward_loss(None, None, img_emb, cap_emb, img_length, cap_length) # measure elapsed time batch_time.update(time.time() - end) end = time.time() if i % log_step == 0: logging('Test: [{0}/{1}]\t' '{e_log}\t' 'Time {batch_time.val:.3f} ({batch_time.avg:.3f})\t' .format( i, len(data_loader), batch_time=batch_time, e_log=str(model.logger))) del images, captions # p = np.random.permutation(len(data_loader.dataset) // 5) * 5 # p = np.transpose(np.tile(p, (5, 1))) # p = p + np.array([0, 1, 2, 3, 4]) # p = p.flatten() # img_embs = img_embs[p] # cap_embs = cap_embs[p] return img_embs, cap_embs, img_lengths, cap_lengths def evalrank(config, checkpoint, split='dev', fold5=False, eval_t2i=True, eval_i2t=False): """ Evaluate a trained model on either dev or test. If `fold5=True`, 5 fold cross-validation is done (only for MSCOCO). Otherwise, the full data is used for evaluation. """ evalrank_start_time = time.time() # load model and options # checkpoint = torch.load(model_path) data_path = config['dataset']['data'] measure = config['training']['measure'] # construct model model = get_model(config) # load model state model.load_state_dict(checkpoint['model'], strict=False) print('Loading dataset') data_loader = get_test_loader(config, workers=4, split_name=split) # initialize ndcg scorer ndcg_val_scorer = DCG(config, len(data_loader.dataset), split, rank=25, relevance_methods=['rougeL', 'spice']) # initialize similarity matrix evaluator sim_matrix_fn = AlignmentContrastiveLoss(aggregation=config['training']['alignment-mode'], return_similarity_mat=True) if config['training'][ 'loss-type'] == 'alignment' else None print('Computing results...') encode_data_start_time = time.time() img_embs, cap_embs, img_lenghts, cap_lenghts = encode_data(model, data_loader) print(f"Time elapsed for encode_data: {time.time() - encode_data_start_time} seconds.") torch.cuda.empty_cache() # if checkpoint2 is not None: # # construct model # model2 = get_model(config2) # # load model state # model2.load_state_dict(checkpoint2['model'], strict=False) # img_embs2, cap_embs2 = encode_data(model2, data_loader) # print('Using 2-model ensemble') # else: # img_embs2, cap_embs2 = None, None # print('Using NO ensemble') print('Images: %d, Captions: %d' % (img_embs.shape[0] / 5, cap_embs.shape[0])) if not fold5: # no cross-validation, full evaluation if eval_i2t: eval_i2t_start_time = time.time() r, rt = i2t(img_embs, cap_embs, img_lenghts, cap_lenghts, return_ranks=True, ndcg_scorer=ndcg_val_scorer, sim_function=sim_matrix_fn, cap_batches=5) ar = (r[0] + r[1] + r[2]) / 3 print("Average i2t Recall: %.1f" % ar) print("Image to text: %.1f %.1f %.1f %.1f %.1f, ndcg_rouge=%.4f, ndcg_spice=%.4f" % r) print(f"Time elapsed for i2t evaluation without 5-fold CV: {time.time() - eval_i2t_start_time} seconds.") if eval_t2i: eval_t2i_start_time = time.time() ri, rti = t2i(img_embs, cap_embs, img_lenghts, cap_lenghts, return_ranks=True, ndcg_scorer=ndcg_val_scorer, sim_function=sim_matrix_fn, im_batches=5) ari = (ri[0] + ri[1] + ri[2]) / 3 print("Average t2i Recall: %.1f" % ari) print("Text to image: %.1f %.1f %.1f %.1f %.1f, ndcg_rouge=%.4f, ndcg_spice=%.4f" % ri) print(f"Time elapsed for t2i evaluation without 5-fold CV: {time.time() - eval_t2i_start_time} seconds.") if eval_i2t and eval_t2i: rsum = r[0] + r[1] + r[2] + ri[0] + ri[1] + ri[2] print("rsum: %.1f" % rsum) else: # 5fold cross-validation, only for MSCOCO results = [] for i in range(5): if eval_i2t: r, rt0 = i2t(img_embs[i * 5000:(i + 1) * 5000], cap_embs[i * 5000:(i + 1) * 5000], img_lenghts[i * 5000:(i + 1) * 5000], cap_lenghts[i * 5000:(i + 1) * 5000], return_ranks=True, ndcg_scorer=ndcg_val_scorer, fold_index=i, sim_function=sim_matrix_fn, cap_batches=1) print("Image to text: %.1f, %.1f, %.1f, %.1f, %.1f, ndcg_rouge=%.4f ndcg_spice=%.4f" % r) if i == 0: rt = rt0 ar = (r[0] + r[1] + r[2]) / 3 if eval_t2i: ri, rti0 = t2i(img_embs[i * 5000:(i + 1) * 5000], cap_embs[i * 5000:(i + 1) * 5000], img_lenghts[i * 5000:(i + 1) * 5000], cap_lenghts[i * 5000:(i + 1) * 5000], return_ranks=True, ndcg_scorer=ndcg_val_scorer, fold_index=i, sim_function=sim_matrix_fn, im_batches=1) print("Text to image: %.1f, %.1f, %.1f, %.1f, %.1f, ndcg_rouge=%.4f, ndcg_spice=%.4f" % ri) if i == 0: rti = rti0 ari = (ri[0] + ri[1] + ri[2]) / 3 if eval_t2i and eval_i2t: rsum = r[0] + r[1] + r[2] + ri[0] + ri[1] + ri[2] print("rsum: %.1f ar: %.1f ari: %.1f" % (rsum, ar, ari)) elif eval_t2i: print("ari: %.1f" % (ari,)) elif eval_i2t: print("ar: %.1f" % (ar,)) if eval_t2i and eval_i2t: results += [list(r) + list(ri) + [ar, ari, rsum]] # 7 + 7 + 3 = 17 elements elif eval_t2i: results += [list(ri) + [ari]] # 7 + 1 = 8 elements elif eval_i2t: results += [list(r) + [ar]] # 7 + 1 = 8 elements print("-----------------------------------") print("Mean metrics: ") mean_metrics = tuple(np.array(results).mean(axis=0).flatten()) if eval_t2i and eval_i2t: print("rsum: %.1f" % (mean_metrics[16] * 6)) print("Average i2t Recall: %.1f" % mean_metrics[14]) print("Image to text: %.1f %.1f %.1f %.1f %.1f ndcg_rouge=%.4f ndcg_spice=%.4f" % mean_metrics[:7]) print("Average t2i Recall: %.1f" % mean_metrics[15]) print("Text to image: %.1f %.1f %.1f %.1f %.1f ndcg_rouge=%.4f ndcg_spice=%.4f" % mean_metrics[7:14]) elif eval_t2i: print("Average t2i Recall: %.1f" % mean_metrics[7]) print("Text to image: %.1f %.1f %.1f %.1f %.1f ndcg_rouge=%.4f ndcg_spice=%.4f" % mean_metrics[:7]) elif eval_i2t: print("Average i2t Recall: %.1f" % mean_metrics[7]) print("Image to text: %.1f %.1f %.1f %.1f %.1f ndcg_rouge=%.4f ndcg_spice=%.4f" % mean_metrics[:7]) if eval_t2i and eval_i2t: torch.save({'rt': rt, 'rti': rti}, 'ranks.pth.tar') elif eval_t2i: torch.save({'rti': rti}, 'ranks.pth.tar') elif eval_i2t: torch.save({'rt': rt}, 'ranks.pth.tar') print(f"Time elapsed for evalrank(): {time.time() - evalrank_start_time} seconds.") def i2t(images, captions, img_lenghts, cap_lenghts, npts=None, return_ranks=False, ndcg_scorer=None, fold_index=0, measure='dot', sim_function=None, cap_batches=1): """ Images->Text (Image Annotation) Images: (5N, K) matrix of images Captions: (5N, K) matrix of captions """ if npts is None: npts = images.shape[0] // 5 index_list = [] ranks = numpy.zeros(npts) top1 = numpy.zeros(npts) rougel_ndcgs = numpy.zeros(npts) spice_ndcgs = numpy.zeros(npts) # captions = captions.cuda() captions_per_batch = captions.shape[0] // cap_batches for index in tqdm.trange(npts): # Get query image im = images[5 * index].reshape(1, images.shape[1], images.shape[2]) im = im.cuda() if sim_function is not None else im im_len = [img_lenghts[5 * index]] d = None # Compute scores if measure == 'order': bs = 100 if index % bs == 0: mx = min(images.shape[0], 5 * (index + bs)) im2 = images[5 * index:mx:5] d2 = order_sim(torch.Tensor(im2).cuda(), torch.Tensor(captions).cuda()) d2 = d2.cpu().numpy() d = d2[index % bs] else: if sim_function is None: d = torch.mm(im[:, 0, :], captions[:, 0, :].t()) d = d.cpu().numpy().flatten() else: for i in range(cap_batches): captions_now = captions[i * captions_per_batch:(i + 1) * captions_per_batch] cap_lenghts_now = cap_lenghts[i * captions_per_batch:(i + 1) * captions_per_batch] captions_now = captions_now.cuda() d_align = sim_function(im, captions_now, im_len, cap_lenghts_now) d_align = d_align.cpu().numpy().flatten() # d_matching = torch.mm(im[:, 0, :], captions[:, 0, :].t()) # d_matching = d_matching.cpu().numpy().flatten() if d is None: d = d_align # + d_matching else: d = numpy.concatenate([d, d_align], axis=0) inds =
numpy.argsort(d)
numpy.argsort
# original case id, # connected 1/inside components, # connected 0/outside components coloring_configs = [ ["000000002222222", 0, 1], ["000000012222222", 1, 1], ["000000112222222", 1, 1], ["000001012022220", 2, 1], ["000001012022221", 1, 1], ["000001012122222", 1, 1], ["000001112222222", 1, 1], ["000011112222222", 1, 1], ["000101002222220", 2, 1], ["000101002222221", 1, 1], ["000101012022220", 2, 1], ["000101012022221", 1, 1], ["000101012122222", 1, 1], ["000101112222222", 1, 1], ["000110102020202", 3, 1], ["000110102020210", 2, 1], ["000110102020211", 1, 1], ["000110102021212", 1, 1], ["000110102121210", 1, 2], ["000110102121211", 1, 1], ["000110112222222", 1, 1], ["000111102220200", 2, 1], ["000111102220201", 1, 1], ["000111102220212", 1, 1], ["001111002200220", 2, 1], ["001111002200221", 1, 1], ["001111002201222", 1, 1], ["010110100000002", 4, 1], ["010110100000012", 3, 1], ["010110100000110", 2, 1], ["010110100000111", 1, 1], ["010110100001010", 2, 1], ["010110100001011", 1, 1], ["010110100001112", 1, 1], ["010110100101010", 2, 2], ["010110100101011", 1, 2], ["010110100101102", 1, 1], ] import os import cv2 import numpy as np # # vertices edges faces # 7 ________ 6 _____6__ ________ # /| /| 7/| /| /| /| # / | / | / | /5 | / | 1 / | # 4 /_______ / | /__4____ / 10 /_______ 5 | # | | |5 | | 11 | | | 3 | | | # | 3|__|_____|2 | |__|__2__| | |__|__2__| # | / | / 8 3/ 9 / | 4 | / # | / | / | / | /1 | / 0| / # |/_______|/ |/___0___|/ |/___ ___|/ # 0 1 # # ---------- <copied from template.py> ---------- # ---------- define points ---------- all_points_len = 0 all_points = [] all_points_color = [] cube_points = np.array([ [0,1,0], [1,1,0], [1,1,1], [0,1,1], [0,0,0], [1,0,0], [1,0,1], [0,0,1], ],np.float32) cube_points = cube_points-0.5 cube_points_color = [ ( 0, 0,255), ( 0,128,255), ( 0,255,255), ( 0,255, 0), (255,255, 0), (255, 0, 0), (255, 0,255), (128, 0,255), ] all_points.append(cube_points) all_points_color += cube_points_color all_points_len = len(all_points_color) small_cube_points = cube_points*0.25 small_cube_points_color = [ ( 0, 0,192), ( 0, 96,192), ( 0,192,192), ( 0,192, 0), (192,192, 0), (192, 0, 0), (192, 0,192), ( 96, 0,192), ] all_points.append(small_cube_points) all_points_color += small_cube_points_color all_points_len = len(all_points_color) edge_from_cube_points_idx = np.array([[0,1], [1,2], [2,3], [0,3], [4,5], [5,6], [6,7], [4,7], [0,4], [1,5], [2,6], [3,7]],np.int32) edge_points = [] find_edge_point_from_cube_points = np.full([8,8],-1,np.int32) for i in range(len(edge_from_cube_points_idx)): p1i = edge_from_cube_points_idx[i,0] p2i = edge_from_cube_points_idx[i,1] p1 = cube_points[p1i] p2 = cube_points[p2i] edge_points.append( (p1+p2)/2 ) find_edge_point_from_cube_points[p1i,p2i] = i find_edge_point_from_cube_points[p2i,p1i] = i find_edge_point_from_cube_points[find_edge_point_from_cube_points>=0] += all_points_len edge_points = np.array(edge_points,np.float32) edge_points_color = [(192,192,192)]*12 all_points.append(edge_points) all_points_color += edge_points_color all_points_len = len(all_points_color) face_from_cube_points_idx = np.array([[0,1,2,3], [4,5,6,7], [1,2,6,5], [0,3,7,4], [0,1,5,4], [3,2,6,7]],np.int32) face_from_cube_points_idx_unique_feature = np.product(face_from_cube_points_idx+1,axis=1) face_points = np.zeros([3,8,3],np.float32) find_face_point_from_cube_point_and_face =
np.full([8,6],-1,np.int32)
numpy.full
import os import logging import time import librosa import numpy as np import struct import array import torch from scipy.io.wavfile import read as wavread # import distoptim as dist def print_rank(str): # time_stamp = datetime.datetime.now().strftime("%I %M %p %B %d %Y") # str = "{} | rank {}: {}".format(time.ctime(), dist.rank(), str) str = "{} : {}".format(time.ctime(), str) # print to log logging.info(str) # print to stdout print(str, flush=True) class AverageMeter(object): """ Will calculate running micro and macro averages for various (error/efficiency) rates. """ def __init__(self, metric_name): self.numerators, self.denominators = list(), list() self.metric_name = metric_name def add(self, top, bottom): # print_rank("{} : {}".format(self.metric_name, # float(top) / bottom)) self.numerators.append(top) self.denominators.append(bottom) def get_macro_average(self): scores = [float(self.numerators[i]) / self.denominators[i] \ for i in range(len(self.denominators))] return self.get_average(scores) def get_micro_average(self): return float(sum(self.numerators)) / sum(self.denominators) def get_average(self, l): # accepts a list and returns average return sum(l) / float(len(l)) def reset(self): self.numerators, self.denominators = list(), list() def display_results(self): print_rank("{} Macro average: {}".format(self.metric_name, self.get_macro_average())) print_rank("{} Micro average: {}".format(self.metric_name, self.get_micro_average())) # define function for plot prob and att_ws def _plot_and_save(array, figname, figsize=(16, 4), dpi=150): import matplotlib.pyplot as plt shape = array.shape if len(shape) == 1: # for eos probability plt.figure(figsize=figsize, dpi=dpi) plt.plot(array) plt.xlabel("Frame") plt.ylabel("Probability") plt.ylim([0, 1]) elif len(shape) == 2: # for tacotron 2 attention weights, whose shape is (out_length, in_length) plt.figure(figsize=figsize, dpi=dpi) plt.imshow(array, aspect="auto", origin='lower', interpolation='none') plt.xlabel("Input") plt.ylabel("Output") elif len(shape) == 4: # for transformer attention weights, whose shape is (#leyers, #heads, out_length, in_length) plt.figure(figsize=(figsize[0] * shape[0], figsize[1] * shape[1]), dpi=dpi) for idx1, xs in enumerate(array): for idx2, x in enumerate(xs, start=1): plt.subplot(shape[0], shape[1], idx1 * shape[1] + idx2) plt.imshow(x, aspect="auto", origin='lower', interpolation='none') plt.xlabel("Input") plt.ylabel("Output") else: raise NotImplementedError("Support only from 1D to 4D array.") plt.tight_layout() if not os.path.exists(os.path.dirname(figname)): # NOTE: exist_ok = True is needed for parallel process decoding os.makedirs(os.path.dirname(figname), exist_ok=True) plt.savefig(figname) plt.close() # define function to calculate focus rate (see section 3.3 in https://arxiv.org/abs/1905.09263) def _calculate_focus_rete(att_ws): if att_ws is None: # fastspeech case -> None return 1.0 elif len(att_ws.shape) == 2: # tacotron 2 case -> (L, T) return float(att_ws.max(dim=-1)[0].mean()) elif len(att_ws.shape) == 4: # transformer case -> (#layers, #heads, L, T) return float(att_ws.max(dim=-1)[0].mean(dim=-1).max()) else: raise ValueError("att_ws should be 2 or 4 dimensional tensor.") # define function to convert attention to duration def _convert_att_to_duration(att_ws): if len(att_ws.shape) == 2: # tacotron 2 case -> (L, T) pass elif len(att_ws.shape) == 4: # transformer case -> (#layers, #heads, L, T) # get the most diagonal head according to focus rate att_ws = torch.cat([att_w for att_w in att_ws], dim=0) # (#heads * #layers, L, T) diagonal_scores = att_ws.max(dim=-1)[0].mean(dim=-1) # (#heads * #layers,) diagonal_head_idx = diagonal_scores.argmax() att_ws = att_ws[diagonal_head_idx] # (L, T) else: raise ValueError("att_ws should be 2 or 4 dimensional tensor.") # calculate duration from 2d attention weight durations = torch.stack([att_ws.argmax(-1).eq(i).sum() for i in range(att_ws.shape[1])]) return durations.view(-1, 1).float() def get_checkpoint_path(output_directory): # os.makedirs(output_directory) in prepare_directories_and_logger file_list = os.listdir(output_directory) file_list.sort(key=lambda fn: os.path.getmtime(os.path.join(output_directory, fn)) if fn.startswith("checkpoint_") else 0) if file_list and file_list[-1].startswith("checkpoint_"): return os.path.join(output_directory, file_list[-1]) else: return None def learning_rate_decay(step, hp): if hp.learning_rate_decay_scheme == "noam": ret = 5000.0 * hp.adim**-0.5 * min((step + 1) * hp.warmup_steps**-1.5, (step + 1)**-0.5) optimizer_correction = 0.002 lr = ret * optimizer_correction * hp.initial_learning_rate else: lr = hp.initial_learning_rate step += 1. if step > hp.warmup_steps: # lr *= (hp.decay_rate ** ((step - hp.warmup_steps) / (hp.decay_end-hp.warmup_steps))) lr *= (hp.decay_rate ** ((step - hp.warmup_steps) / hp.decay_steps)) lr = max(lr, hp.final_learning_rate) return lr def load_wav_to_torch(full_path): #data, sampling_rate = librosa.core.load(full_path, sr=None) sampling_rate, data = wavread(full_path) return torch.FloatTensor(data.astype(np.float32)), sampling_rate def load_filepaths_and_text(filename, split="|"): with open(filename, encoding='utf-8') as f: filepaths_and_text = [line.strip().split(split) for line in f] return filepaths_and_text def save_htk_data(feature, file_name): (nframes, vec_size) = np.shape(feature) byte = 4 * vec_size htktype = 9 frameshift = 50000 hdr = struct.pack("<2l2h", nframes, frameshift, byte, htktype) with open(file_name, 'wb') as f: f.write(hdr) sdata =
np.reshape(feature, [-1])
numpy.reshape
import json import os import random import cv2 import numpy as np import torch import torch.utils.data from tqdm import tqdm def collate_function_seq(batch): dem_frames = torch.stack([item[0] for item in batch]) dem_actions = torch.stack([item[1] for item in batch]) dem_lens = [item[2] for item in batch] query_frames = torch.stack([item[3] for item in batch]) target_actions = torch.stack([item[4] for item in batch]) return [dem_frames, dem_actions, dem_lens, query_frames, target_actions] def index_data(json_list, path_list): print(f'processing files {len(json_list)}') data_tuples = [] for j, v in tqdm(zip(json_list, path_list)): with open(j, 'r') as f: state = json.load(f) ep_lens = [len(x) for x in state] past_len = 0 for e, l in enumerate(ep_lens): data_tuples.append([]) # skip first 30 frames and last 83 frames for f in range(30, l - 83): # find action taken; f0x, f0y = state[e][f]['agent'][0] f1x, f1y = state[e][f + 1]['agent'][0] dx = (f1x - f0x) / 2. dy = (f1y - f0y) / 2. action = [dx, dy] # action = ACTION_LIST.index([dx, dy]) data_tuples[-1].append((v, past_len + f, action)) assert len(data_tuples[-1]) > 0 past_len += l return data_tuples class TransitionDataset(torch.utils.data.Dataset): """ Training dataset class for the behavior cloning mlp model. Args: path: path to the dataset types: list of video types to include size: size of the frames to be returned mode: train, val num_context: number of context state-action pairs num_test: number of test state-action pairs num_trials: number of trials in an episode action_range: number of frames to skip; actions are combined over these number of frames (displcement) of the agent process_data: whether to the videos or not (skip if already processed) __getitem__: returns: (dem_frames, dem_actions, query_frames, target_actions) dem_frames: (num_context, 3, size, size) dem_actions: (num_context, 2) query_frames: (num_test, 3, size, size) target_actions: (num_test, 2) """ def __init__(self, path, types=None, size=None, mode="train", num_context=30, num_test=1, num_trials=9, action_range=10, process_data=0): self.path = path self.types = types self.size = size self.mode = mode self.num_trials = num_trials self.num_context = num_context self.num_test = num_test self.action_range = action_range self.ep_combs = self.num_trials * (self.num_trials - 2) # 9p2 - 9 self.eps = [[x, y] for x in range(self.num_trials) for y in range(self.num_trials) if x != y] types_str = '_'.join(self.types) self.path_list = [] self.json_list = [] # get video paths and json file paths for t in types: print(f'reading files of type {t} in {mode}') paths = [os.path.join(self.path, t, x) for x in os.listdir(os.path.join(self.path, t)) if x.endswith(f'.mp4')] jsons = [os.path.join(self.path, t, x) for x in os.listdir(os.path.join(self.path, t)) if x.endswith(f'.json') and 'index' not in x] paths = sorted(paths) jsons = sorted(jsons) if mode == 'train': self.path_list += paths[:int(0.8 * len(jsons))] self.json_list += jsons[:int(0.8 * len(jsons))] elif mode == 'val': self.path_list += paths[int(0.8 * len(jsons)):] self.json_list += jsons[int(0.8 * len(jsons)):] else: self.path_list += paths self.json_list += jsons self.data_tuples = [] if process_data: # index the videos in the dataset directory. This is done to speed up the retrieval of videos. # frame index, action tuples are stored self.data_tuples = index_data(self.json_list, self.path_list) # tuples of frame index and action (displacement of agent) index_dict = {'data_tuples': self.data_tuples} with open(os.path.join(self.path, f'index_bib_{mode}_{types_str}.json'), 'w') as fp: json.dump(index_dict, fp) else: # read pre-indexed data with open(os.path.join(self.path, f'index_bib_{mode}_{types_str}.json'), 'r') as fp: index_dict = json.load(fp) self.data_tuples = index_dict['data_tuples'] self.tot_trials = len(self.path_list) * 9 def _get_frame(self, video, frame_idx): cap = cv2.VideoCapture(video) # read frame at id and resize cap.set(cv2.CAP_PROP_POS_FRAMES, frame_idx) _, frame = cap.read() if self.size is not None: assert frame is not None, f'frame is empty {frame_idx}, {video}' frame = cv2.resize(frame, self.size) frame = torch.tensor(frame).permute(2, 0, 1) # return frames as a torch tensor f x c x w x h frame = frame.to(torch.float32) / 255. cap.release() return frame def get_trial(self, trials, num_transitions, step=1): # retrieve state embeddings and actions from cached file states = [] actions = [] trial_len = [] for t in trials: trial_len += [(t, n) for n in range(0, len(self.data_tuples[t]), step)] random.shuffle(trial_len) if len(trial_len) < num_transitions: return None, None, False for t, n in trial_len[:num_transitions]: video = self.data_tuples[t][n][0] states.append(self._get_frame(video, self.data_tuples[t][n][1])) # actions are pooled over frames if len(self.data_tuples[t]) > n + self.action_range: actions_xy = [d[2] for d in self.data_tuples[t][n:n + self.action_range]] else: actions_xy = [d[2] for d in self.data_tuples[t][n:]] actions_xy = np.array(actions_xy) actions_xy = np.mean(actions_xy, axis=0) actions.append(actions_xy) states = torch.stack(states, dim=0) actions = torch.tensor(np.array(actions)) return states, actions, True def __getitem__(self, idx): # retrieve expert trajectories dem = False test = False # dem and test check for valid trajectory samples while not dem or not test: ep_trials = [idx * self.num_trials + t for t in range(self.num_trials)] random.shuffle(ep_trials) dem_states, dem_actions, dem = self.get_trial(ep_trials[:-1], self.num_context) test_states, test_actions, test = self.get_trial([ep_trials[-1]], self.num_test, step=self.action_range) return dem_states, dem_actions, test_states, test_actions def __len__(self): return self.tot_trials // self.num_trials class TestTransitionDataset(torch.utils.data.Dataset): """ Test dataset class for the behavior cloning mlp model. This dataset is used to test the model on the eval data. This class is used to compare plausible and implausible episodes. Args: path: path to the dataset types: video type to evaluate on size: size of the frames to be returned mode: test num_context: number of context state-action pairs num_test: number of test state-action pairs num_trials: number of trials in an episode action_range: number of frames to skip; actions are combined over these number of frames (displcement) of the agent process_data: whether to the videos or not (skip if already processed) __getitem__: returns: (expected_dem_frames, expected_dem_actions, expected_query_frames, expected_target_actions, unexpected_dem_frames, unexpected_dem_actions, unexpected_query_frames, unexpected_target_actions) dem_frames: (num_context, 3, size, size) dem_actions: (num_context, 2) query_frames: (num_test, 3, size, size) target_actions: (num_test, 2) """ def __init__(self, path, task_type=None, size=None, mode="test", num_context=30, num_test=1, num_trials=9, action_range=10, process_data=0): self.path = path self.task_type = task_type self.size = size self.mode = mode self.num_trials = num_trials self.num_context = num_context self.num_test = num_test self.action_range = action_range self.ep_combs = self.num_trials * (self.num_trials - 2) # 9p2 - 9 self.eps = [[x, y] for x in range(self.num_trials) for y in range(self.num_trials) if x != y] self.path_list_exp = [] self.json_list_exp = [] self.path_list_un = [] self.json_list_un = [] print(f'reading files of type {task_type} in {mode}') paths_expected = sorted([os.path.join(self.path, task_type, x) for x in os.listdir(os.path.join(self.path, task_type)) if x.endswith(f'e.mp4')]) jsons_expected = sorted([os.path.join(self.path, task_type, x) for x in os.listdir(os.path.join(self.path, task_type)) if x.endswith(f'e.json') and 'index' not in x]) paths_unexpected = sorted([os.path.join(self.path, task_type, x) for x in os.listdir(os.path.join(self.path, task_type)) if x.endswith(f'u.mp4')]) jsons_unexpected = sorted([os.path.join(self.path, task_type, x) for x in os.listdir(os.path.join(self.path, task_type)) if x.endswith(f'u.json') and 'index' not in x]) self.path_list_exp += paths_expected self.json_list_exp += jsons_expected self.path_list_un += paths_unexpected self.json_list_un += jsons_unexpected self.data_unexpected = [] self.data_expected = [] if process_data: # index data. This is done speed up video retrieval. # frame index, action tuples are stored self.data_expected = self.index_data(self.json_list_exp, self.path_list_exp) index_dict = {'data_tuples': self.data_expected} with open(os.path.join(self.path, f'index_bib_test_{task_type}e.json'), 'w') as fp: json.dump(index_dict, fp) self.data_unexpected = self.index_data(self.json_list_un, self.path_list_un) index_dict = {'data_tuples': self.data_unexpected} with open(os.path.join(self.path, f'index_bib_test_{task_type}u.json'), 'w') as fp: json.dump(index_dict, fp) else: # load pre-indexed data with open(os.path.join(self.path, f'index_bib_test_{task_type}e.json'), 'r') as fp: index_dict = json.load(fp) self.data_expected = index_dict['data_tuples'] with open(os.path.join(self.path, f'index_bib_test_{task_type}u.json'), 'r') as fp: index_dict = json.load(fp) self.data_unexpected = index_dict['data_tuples'] def _get_frame(self, video, frame_idx): cap = cv2.VideoCapture(video) # read frame at id and resize cap.set(cv2.CAP_PROP_POS_FRAMES, frame_idx) _, frame = cap.read() if self.size is not None: assert frame is not None, f'frame is empty {frame_idx}, {video}' frame = cv2.resize(frame, self.size) frame = torch.tensor(frame).permute(2, 0, 1) # return frames as a torch tensor f x c x w x h frame = frame.to(torch.float32) / 255. cap.release() return frame def get_trial(self, trials, data, step=1, shuffle=False): # retrieve state embeddings and actions from cached file states = [] actions = [] trial_len = [] for t in trials: trial_len += [(t, n) for n in range(0, len(data[t]), step)] if shuffle: random.shuffle(trial_len) trial_len = trial_len[:100] for t, n in trial_len: video = data[t][n][0] states.append(self._get_frame(video, data[t][n][1])) actions_xy = [d[2] for d in data[t][n:n + self.action_range]] actions_xy = np.array(actions_xy) actions_xy = np.mean(actions_xy, axis=0) actions.append(actions_xy) states = torch.stack(states, dim=0) actions = torch.tensor(np.array(actions)) return states, actions def __getitem__(self, idx): # retrieve expert trajectories ep_trials = [idx * self.num_trials + t for t in range(self.num_trials)] # retrieve complete fam trajectories fam_expected_states, fam_expected_actions = self.get_trial(ep_trials[:-1], self.data_expected, shuffle=True) fam_unexpected_states, fam_unexpected_actions = self.get_trial(ep_trials[:-1], self.data_unexpected, shuffle=True) # retrieve complete test trajectories test_expected_states, test_expected_actions = self.get_trial([ep_trials[-1]], self.data_expected, step=self.action_range) test_unexpected_states, test_unexpected_actions = self.get_trial([ep_trials[-1]], self.data_unexpected, step=self.action_range) return fam_expected_states, fam_expected_actions, test_expected_states, test_expected_actions, \ fam_unexpected_states, fam_unexpected_actions, test_unexpected_states, test_unexpected_actions def __len__(self): return len(self.data_expected) // 9 class TransitionDatasetSequence(torch.utils.data.Dataset): """ Training dataset class for the behavior cloning mlp model. Args: path: path to the dataset types: list of video types to include size: size of the frames to be returned mode: train, val num_context: number of context state-action pairs num_test: number of test state-action pairs num_trials: number of trials in an episode action_range: number of frames to skip; actions are combined over these number of frames (displcement) of the agent process_data: whether to the videos or not (skip if already processed) max_len: maximum length of the sequence __getitem__: returns: (dem_frames, dem_actions, dem_lens, query_frames, target_actions) dem_frames: (num_context, 3, size, size) dem_actions: (num_context, max_len, 2) dem_lens: (num_context) query_frames: (num_test, 3, size, size) target_actions: (num_test, 2) """ def __init__(self, path, types=None, size=None, mode="train", num_context=30, num_test=1, num_trials=9, action_range=10, process_data=0, max_len=30): self.path = path self.types = types self.size = size self.mode = mode self.num_trials = num_trials self.num_context = num_context self.num_test = num_test self.action_range = action_range self.max_len = max_len self.ep_combs = self.num_trials * (self.num_trials - 2) # 9p2 - 9 self.eps = [[x, y] for x in range(self.num_trials) for y in range(self.num_trials) if x != y] types_str = '_'.join(self.types) self.path_list = [] self.json_list = [] for t in types: print(f'reading files of type {t} in {mode}') paths = [os.path.join(self.path, t, x) for x in os.listdir(os.path.join(self.path, t)) if x.endswith(f'.mp4')] jsons = [os.path.join(self.path, t, x) for x in os.listdir(os.path.join(self.path, t)) if x.endswith(f'.json') and 'index' not in x] paths = sorted(paths) jsons = sorted(jsons) if mode == 'train': self.path_list += paths[:int(0.8 * len(jsons))] self.json_list += jsons[:int(0.8 * len(jsons))] elif mode == 'val': self.path_list += paths[int(0.8 * len(jsons)):] self.json_list += jsons[int(0.8 * len(jsons)):] else: self.path_list += paths self.json_list += jsons self.data_tuples = [] if process_data: # index the videos for quicker video retrieval. self.data_tuples = index_data(self.json_list, self.path_list) index_dict = {'data_tuples': self.data_tuples} with open(os.path.join(self.path, f'index_bib_{mode}_{types_str}.json'), 'w') as fp: json.dump(index_dict, fp) else: # load pre-existing index with open(os.path.join(self.path, f'index_bib_{mode}_{types_str}.json'), 'r') as fp: index_dict = json.load(fp) self.data_tuples = index_dict['data_tuples'] self.tot_trials = len(self.path_list) * 9 def _get_frame(self, video, frame_idx): cap = cv2.VideoCapture(video) # read frame at id and resize cap.set(cv2.CAP_PROP_POS_FRAMES, frame_idx) _, frame = cap.read() if self.size is not None: assert frame is not None, f'frame is empty {frame_idx}, {video}' frame = cv2.resize(frame, self.size) frame = torch.tensor(frame).permute(2, 0, 1) # return frames as a torch tensor f x c x w x h frame = frame.to(torch.float32) / 255. cap.release() return frame def get_trial(self, trials, step=10): # retrieve state embeddings and actions from cached file states = [] actions = [] trial_len = [] lens = [] for t in trials: tl = [(t, n) for n in range(0, len(self.data_tuples[t]), step)] if len(tl) > self.max_len: tl = tl[:self.max_len] trial_len.append(tl) for tl in trial_len: states.append([]) actions.append([]) lens.append(len(tl)) for t, n in tl: video = self.data_tuples[t][n][0] states[-1].append(self._get_frame(video, self.data_tuples[t][n][1])) if len(self.data_tuples[t]) > n + self.action_range: actions_xy = [d[2] for d in self.data_tuples[t][n:n + self.action_range]] else: actions_xy = [d[2] for d in self.data_tuples[t][n:]] actions_xy = np.array(actions_xy) actions_xy = np.mean(actions_xy, axis=0) actions[-1].append(actions_xy) states[-1] = torch.stack(states[-1]) trial_frames_padded = torch.zeros(self.max_len, states[-1].size(1), states[-1].size(2), states[-1].size(3)) trial_frames_padded[:states[-1].size(0), :, :, :] = states[-1] states[-1] = trial_frames_padded actions[-1] = torch.tensor(np.array(actions[-1])) trial_actions_padded = torch.zeros(self.max_len, actions[-1].size(1)) trial_actions_padded[:actions[-1].size(0), :] = actions[-1] actions[-1] = trial_actions_padded states = torch.stack(states) actions = torch.stack(actions) return states, actions, lens def get_test(self, trial, step=10): # retrieve state embeddings and actions from cached file trial_len = [] trial_len += [(trial, n) for n in range(0, len(self.data_tuples[trial]), step)] query_idx = random.randint(0, len(trial_len) - 1) context_len = query_idx - 1 tq, nq = trial_len[query_idx] video = self.data_tuples[tq][nq][0] query_frame = self._get_frame(video, self.data_tuples[tq][nq][1]) if len(self.data_tuples[tq]) > nq + self.action_range: actions_xy = [d[2] for d in self.data_tuples[tq][nq:nq + self.action_range]] else: actions_xy = [d[2] for d in self.data_tuples[tq][nq:]] actions_xy = np.array(actions_xy) actions_xy = np.mean(actions_xy, axis=0) target_action = torch.tensor(actions_xy) # return trial_frames_padded, trial_actions_padded, context_len, query_frame, target_action return query_frame, target_action def __getitem__(self, idx): # retrieve expert trajectories ep_trials = [idx * self.num_trials + t for t in range(self.num_trials)] random.shuffle(ep_trials) dem_states, dem_actions, dem_lens = self.get_trial(ep_trials[:-1], step=self.action_range) query_frame, target_action = self.get_test(ep_trials[-1], step=self.action_range) return dem_states, dem_actions, dem_lens, query_frame, target_action def __len__(self): return self.tot_trials // self.num_trials class TestTransitionDatasetSequence(torch.utils.data.Dataset): """ Test dataset class for the behavior cloning rnn model. This dataset is used to test the model on the eval data. This class is used to compare plausible and implausible episodes. Args: path: path to the dataset types: list of video types to include size: size of the frames to be returned mode: test num_context: number of context state-action pairs num_test: number of test state-action pairs num_trials: number of trials in an episode action_range: number of frames to skip; actions are combined over these number of frames (displcement) of the agent process_data: whether to the videos or not (skip if already processed) __getitem__: returns: (expected_dem_frames, expected_dem_actions, expected_dem_lens expected_query_frames, expected_target_actions, unexpected_dem_frames, unexpected_dem_actions, unexpected_dem_lens, unexpected_query_frames, unexpected_target_actions) dem_frames: (num_context, max_len, 3, size, size) dem_actions: (num_context, max_len, 2) dem_lens: (num_context) query_frames: (num_test, 3, size, size) target_actions: (num_test, 2) """ def __init__(self, path, task_type=None, size=None, mode="train", num_context=30, num_test=1, num_trials=9, action_range=10, process_data=0, max_len=30): self.path = path self.task_type = task_type self.size = size self.mode = mode self.num_trials = num_trials self.num_context = num_context self.num_test = num_test self.action_range = action_range self.max_len = max_len self.ep_combs = self.num_trials * (self.num_trials - 2) # 9p2 - 9 self.eps = [[x, y] for x in range(self.num_trials) for y in range(self.num_trials) if x != y] self.path_list_exp = [] self.json_list_exp = [] self.path_list_un = [] self.json_list_un = [] print(f'reading files of type {task_type} in {mode}') paths_expected = sorted([os.path.join(self.path, task_type, x) for x in os.listdir(os.path.join(self.path, task_type)) if x.endswith(f'{task_type}e.mp4')]) jsons_expected = sorted([os.path.join(self.path, task_type, x) for x in os.listdir(os.path.join(self.path, task_type)) if x.endswith(f'{task_type}e.json') and 'index' not in x]) paths_unexpected = sorted([os.path.join(self.path, task_type, x) for x in os.listdir(os.path.join(self.path, task_type)) if x.endswith(f'{task_type}u.mp4')]) jsons_unexpected = sorted([os.path.join(self.path, task_type, x) for x in os.listdir(os.path.join(self.path, task_type)) if x.endswith(f'{task_type}u.json') and 'index' not in x]) self.path_list_exp += paths_expected self.json_list_exp += jsons_expected self.path_list_un += paths_unexpected self.json_list_un += jsons_unexpected self.data_expected = [] self.data_unexpected = [] if process_data: # index data. This is done to speed up video retrieval. # frame index, action tuples are stored self.data_expected = self.index_data(self.json_list_exp, self.path_list_exp) index_dict = {'data_tuples': self.data_expected} with open(os.path.join(self.path, f'index_bib_test_{task_type}e.json'), 'w') as fp: json.dump(index_dict, fp) self.data_unexpected = self.index_data(self.json_list_un, self.path_list_un) index_dict = {'data_tuples': self.data_unexpected} with open(os.path.join(self.path, f'index_bib_test_{task_type}u.json'), 'w') as fp: json.dump(index_dict, fp) else: with open(os.path.join(self.path, f'index_bib_{mode}_{task_type}e.json'), 'r') as fp: index_dict = json.load(fp) self.data_expected = index_dict['data_tuples'] with open(os.path.join(self.path, f'index_bib_{mode}_{task_type}u.json'), 'r') as fp: index_dict = json.load(fp) self.data_unexpected = index_dict['data_tuples'] def _get_frame(self, video, frame_idx): cap = cv2.VideoCapture(video) # read frame at id and resize cap.set(cv2.CAP_PROP_POS_FRAMES, frame_idx) _, frame = cap.read() if self.size is not None: assert frame is not None, f'frame is empty {frame_idx}, {video}' frame = cv2.resize(frame, self.size) frame = torch.tensor(frame).permute(2, 0, 1) # return frames as a torch tensor f x c x w x h frame = frame.to(torch.float32) / 255. cap.release() return frame def get_trial(self, trials, data, step=10): # retrieve state embeddings and actions from cached file states = [] actions = [] trial_len = [] lens = [] for t in trials: tl = [(t, n) for n in range(0, len(data[t]), step)] if len(tl) > self.max_len: tl = tl[:self.max_len] trial_len.append(tl) for tl in trial_len: states.append([]) actions.append([]) lens.append(len(tl)) for t, n in tl: video = data[t][n][0] states[-1].append(self._get_frame(video, data[t][n][1])) if len(data[t]) > n + self.action_range: actions_xy = [d[2] for d in data[t][n:n + self.action_range]] else: actions_xy = [d[2] for d in data[t][n:]] actions_xy = np.array(actions_xy) actions_xy = np.mean(actions_xy, axis=0) actions[-1].append(actions_xy) states[-1] = torch.stack(states[-1]) trial_frames_padded = torch.zeros(self.max_len, states[-1].size(1), states[-1].size(2), states[-1].size(3)) trial_frames_padded[:states[-1].size(0), :, :, :] = states[-1] states[-1] = trial_frames_padded actions[-1] = torch.tensor(
np.array(actions[-1])
numpy.array
import cv2 import numpy as np import math import random import torch from PIL import Image def get_max_overlap(box1, box2): # get overlap lt = np.maximum(box1[None, :2], box2[:, :2]) # [N,2] rb = np.minimum(box1[None, 2:], box2[:, 2:]) # [N,2] TO_REMOVE = 1 wh = np.clip(rb - lt, TO_REMOVE, None) # [N,2] inter = wh[:, 0] * wh[:, 1] # [N] area1 = (box1[2] - box1[0]) * (box1[3] - box1[1]) area2 = (box2[:, 2] - box2[:, 0]) * (box2[:, 3] - box2[:, 1]) iou = inter / (min(area1 , np.min(area2))+1) return np.max(iou) def get_affine_transform(center, scale, rot, output_size, shift=np.array([0, 0], dtype=np.float32), inv=0): def get_3rd_point(a, b): direct = a - b return b + np.array([-direct[1], direct[0]], dtype=np.float32) def get_dir(src_point, rot_rad): sn, cs = np.sin(rot_rad), np.cos(rot_rad) src_result = [0, 0] src_result[0] = src_point[0] * cs - src_point[1] * sn src_result[1] = src_point[0] * sn + src_point[1] * cs return src_result if not isinstance(scale, np.ndarray) and not isinstance(scale, list): scale =
np.array([scale, scale], dtype=np.float32)
numpy.array
import numpy as np import scipy.stats from scipy.signal.windows import * import datetime def generateRandomBits(n_bits): ''' Generates a numpy array of 0's and 1's. ''' return np.random.randint(0,high=2,size=n_bits,dtype='int') def bitsToSymbols(bits, M): ''' Takes an array of bits and converts them to their corresponding symbols. M is the number of points in the constellation. e.g. 0101 0000 1111 1010 -> 5 0 15 10 ''' n = int(np.log2(M)) nsym = int(len(bits)/n) symbols = np.zeros((nsym,),dtype='int') w = (2**np.arange(n-1,-1,-1)).astype('int') for i in range(0,nsym): symbols[i] = sum(bits[i*n:(i+1)*n] * w) return symbols def symbolsToIq(syms, constellation): """ Converts symbol indexes to complex values according to the given constellation """ return constellation[syms] def matchedFilter(x, p): """ Given a signal x, performs matched filtering based on pulse shape p """ return np.convolve(x,np.flip(np.conj(p))) def symbolsToBits(syms, M): ''' Takes a series of symbols and converts them to their corresponding bits. M is the number of points in the constellation. e.g. 5 0 15 10 -> 0101 0000 1111 1010 ''' n = int(np.log2(M)) bits = np.zeros(len(syms)*n, dtype='int') for i in range(0,len(syms)): s = format(syms[i], '0'+str(n)+'b') # represent symbol as binary string for j in range(0,n): bits[i*n+j] = s[j] return bits def calculateBer(b1,b2): """ Calculates the number of nonzero elements in the difference of the two arrays, and computes the bit error rate """ return np.count_nonzero(b1 - b2) / len(b1) def noiseVariance(SNR, Eb): """ Given an SNR in dB and an energy per bit Eb, calculate the noise variance N0. Note: This calculates Eb / gamma, where gamma is the SNR on a linear scale. """ return Eb / (10 ** (SNR/10)) # calculates N0 def addNoise(iqs, **kwargs): ''' adds additive white gaussian noise to an array of complex IQ samples in **kwargs, you must specify a. SNR (dB) and Eb (the energy per bit), or b. N0, the noise variance ''' if 'SNR' and 'Eb' in kwargs.keys(): SNR = kwargs['SNR'] Eb = kwargs['Eb'] N0 = noiseVariance(SNR, Eb) elif 'N0' in kwargs.keys(): N0 = kwargs['N0'] else: raise Exception("addNoise(): must specify N0 or SNR & Eb in kwargs.") var = N0 / 2 nr = np.random.normal(scale=np.sqrt(var), size=(len(iqs),)) ni = np.random.normal(scale=np.sqrt(var), size=(len(iqs),)) return iqs + (nr + 1j*ni) def addFrequencyOffset(iqs, nuT=0.0): ''' Adds a frequency nuT in terms of cycles/sample. ''' return iqs * np.exp(1j*2.0*np.pi*np.arange(0,len(iqs))*nuT) def addPhaseOffset(iqs, phase=None): ''' Adds a random phase to a list of complex values. If none is specifed, a random phase is chosen. ''' if phase == None: phase = 2*np.pi*np.random.rand() return iqs * np.exp(1j*phase) def phaseAmbiguity(rx,uw): ''' Returns angle between received samples and the provided unique word. ''' return np.angle(np.sum(rx*np.conj(uw))) def phaseAmbiguityResolution(rx, rxuw, uw): ''' Returns the received data with the phase ambiguity removed. rxuw are the received symbols corresponding to the unique word uw is the unique word itself ''' a = phaseAmbiguity(rxuw,uw) return addPhaseOffset(rx, phase=-a) def makeDecision(iq, constellation): ''' returns the index of nearest constellation point ''' return np.argmin(abs(constellation - iq)) def makeDecisions(iqs, constellation): ''' returns the indexes of the nearest constellation points ''' idxs = np.zeros(len(iqs), dtype='int8') for i in range(0,len(iqs)): idxs[i] = makeDecision(iqs[i], constellation) return idxs def freqOffsetEstimation16Apsk(rx, mode='gauss'): ''' Various methods for estimating a frequency offset when using a 16-APSK constellation Returns the normalized frequency offset in terms of cycles/sample Available modes: 'coarse' 'gauss' 'interp_1' 'interp_2' ''' def nonLinearXform(z): zz_m = z * np.conj(z); zz_p = 12 * np.angle(z); return zz_m * np.exp(1j*zz_p); z = nonLinearXform(rx) Lfft = 2*len(z) ZZ = np.fft.fft(z,Lfft) PP2 = ZZ * np.conj(ZZ) idx_max = np.argmax(PP2) if idx_max >= Lfft/2: vhat2 = (idx_max-Lfft)/(Lfft*12) else: vhat2 = idx_max/(Lfft*12) II1 = abs(PP2[idx_max-1]) II2 = abs(PP2[idx_max]) II3 = abs(PP2[idx_max+1]) II0 = np.maximum(II1, II3) if mode == 'interp_1': return vhat2 + 1/(12*Lfft) * 0.5*(II1-II3)/(II1-2*II2+II3) # D'Amico elif mode == 'interp_2': return vhat2 + np.sign(II3 - II1) / Lfft * II0 / (II2 - II0) / 2 / 2 / np.pi / 12 elif mode == 'gauss': return vhat2 + ( (1 / Lfft) * (np.log(II1) - np.log(II3)) / (np.log(II1) - 2*np.log(II2) + np.log(II3)) ) / (24 * np.pi) elif mode == 'coarse': return vhat2 else: raise Exception('Invalid mode.') def freqOffsetEstimationQpsk(rx, mode='interp_2'): ''' Various methods for estimating a frequency offset when using a QPSK constellation Returns the normalized frequency offset in terms of cycles/sample Available modes: 'coarse' 'gauss' 'interp_1' 'interp_2' Note: none of these have been derived from first princples. I modified the 16-APSK frequency estimators and they appear to work. There are probably more efficient/better frequency estimation methods available for QPSK. I simply haven't looked for them. ''' def nonLinearXform(z): zz_m = z * np.conj(z); zz_p = 4 * np.angle(z); return zz_m * np.exp(1j*zz_p); z = nonLinearXform(rx) Lfft = 2*len(z) ZZ = np.fft.fft(z,Lfft) PP2 = ZZ * np.conj(ZZ) idx_max = np.argmax(PP2) if idx_max >= Lfft/2: vhat2 = (idx_max-Lfft)/(Lfft*4) else: vhat2 = idx_max/(Lfft*4) II1 = abs(PP2[idx_max-1]) II2 = abs(PP2[idx_max]) II3 = abs(PP2[idx_max+1]) II0 = np.maximum(II1, II3) if mode == 'interp_1': return vhat2 + 1/(4*Lfft) * 0.5*(II1-II3)/(II1-2*II2+II3) # D'Amico elif mode == 'interp_2': return vhat2 + np.sign(II3 - II1) / Lfft * II0 / (II2 - II0) / 2 / 2 / np.pi / 4 elif mode == 'gauss': return vhat2 + ( (1 / Lfft) * (np.log(II1) - np.log(II3)) / (np.log(II1) - 2*np.log(II2) + np.log(II3)) ) / (2 * 4 * np.pi) elif mode == 'coarse': return vhat2 else: raise Exception('Invalid mode.') def createDerivativeFilter(N=51,Tsamp=1): ''' Calculates the coefficients for a derivative filter. N must be odd ''' if (N+1)%4 != 0: raise Exception("createDerivativeFilter: N must be of form 4*n-1") ndmin = -(N-1)/2 ndmax = (N-1)/2 nd = np.arange(ndmin, ndmax+1) d = np.zeros(nd.shape) ndnz = nd != 0 # nonzero indexes d[ndnz] = 1 / Tsamp * ((-1)**nd[ndnz]) / nd[ndnz] d = d * blackman(N) return d def derivativeFilter2(x, N=51,Tsamp=1,zero_edge=False): ''' Calculates the derivative of a discrete-time signal x with sample time Tsamp using a filter of length N. Because convolution results in values that are not correct near the edges, I decided to zero out those values as they can be quite large. So don't be surpised by the zeros at the beginning and end of the array. ''' d = createDerivativeFilter(N=N,Tsamp=Tsamp) pad = int((N-1)/2) # this is the number of samples at the beginning/end of the signal that aren't quite correct due to blurring from convolution xd = (np.convolve(x,d))[pad:-pad] if zero_edge: xd[0:pad] = 0 xd[-pad:-1] = 0 xd[-1] = 0 return xd def derivativeFilter(x,N=51,Tsamp=1): ''' Calculates the derivative of a discrete-time signal x with sample time Tsamp using a filter of length N. Because convolution results in values that are not correct near the edges, this function appends a linear extrapolation on either end prior to convolution to avoid strange filter behavior. This might not work well in the presence of even mild noise, but seems to work better than the original function I wrote. ''' d = createDerivativeFilter(N=N,Tsamp=Tsamp) pad = int((N-1)/2) # this is the number of samples at the beginning/end of the signal that aren't quite correct due to blurring from convolution # extend x with linear extrapolation on both ends x2 = np.zeros((len(x)+2*pad,)) x2[pad:-pad] = x # insert sequence in middle x2[0:pad] = x[0] - np.arange(pad,0,step=-1) * (x[1] - x[0]) # left side extrapolation x2[len(x2)-pad:len(x2)] = x[-1] + np.arange(1,pad+1) * (x[-1] - x[-2]) # right side extrapolation # valid values xd = (np.convolve(x2,d))[2*pad:-2*pad] return xd def fractionalDelayCoeffs(T, dT, L): """ Produces fractional delay filter coefficients. """ n = np.arange(-L,L+1) x = (n+dT/T)*np.pi r = np.ones(x.shape) idxs = x != 0 r[idxs] = np.sin(x[idxs]) / x[idxs] return r # return np.sin(x) / x def fractionalDelayFilter(x,gamma,N=51): """ Given a sampled signal x, delay by gamma samples, where gamma can be any float. N is the length of the filter used. """ d = fractionalDelayCoeffs(1,gamma,N//2) pad = int((N-1)/2) # this is the number of samples at the beginning/end of the signal that aren't quite correct due to blurring from convolution # extend x with linear extrapolation on both ends x2 = np.zeros((len(x)+2*pad,)) x2[pad:-pad] = x # insert sequence in middle x2[0:pad] = x[0] - np.arange(pad,0,step=-1) * (x[1] - x[0]) # left side extrapolation x2[len(x2)-pad:len(x2)] = x[-1] + np.arange(1,pad+1) * (x[-1] - x[-2]) # right side extrapolation # valid values xd = (np.convolve(x2,d))[2*pad:-2*pad] return xd def rcosdesign(alpha, span, sps, Ts=1, shape='sqrt'): """ Heavily modified from https://github.com/veeresht/CommPy/blob/master/commpy/filters.py Modified: -to return pulse with unit energy. -match MATLAB function call -return pulse shape of length span*Fs+1 Generates a root raised cosine (RRC) filter (FIR) impulse response Parameters ---------- alpha : float Roll off factor (Valid values are [0, 1]). span : int Number of symbols to span sps : int Samples per symbol Ts : float Symbol period in seconds. Returns --------- h : 1-D ndarray of floats Impulse response of the root raised cosine filter. time_idx : 1-D ndarray of floats Array containing the time indices, in seconds, for the impulse response. """ N = span * sps T_delta = Ts/float(sps) time_idx = ((np.arange(N+1)-N/2))*T_delta sample_num = np.arange(N) h =
np.zeros(N, dtype=float)
numpy.zeros
import pyxinput import torch import numpy as np import time import datetime import utils import neural_net from neural_net import Net import torchvision.models as models import torch.nn as nn from torchvision import transforms PATH = "WGANGP_withPrevAction_NEW_was_mse_30_sgd_16_0_01_e50.pt" class XController(pyxinput.vController): leftJoyX = 'AxisLx' leftJoyY = 'AxisLy' rightJoyX = 'AxisRx' rightJoyY = 'AxisRy' leftTrigger = 'TriggerL' rightTrigger = 'TriggerR' leftBumper = 'BtnShoulderL' rightBumper = 'BtnShoulderR' a = 'BtnA' x = 'BtnX' y = 'BtnY' b = 'BtnB' leftThumb = 'BtnThumbL' rightThumb = 'BtnThumbR' back = 'BtnBack' start = 'BtnStart' dpad = 'Dpad' current_state = np.random.rand(20) * 2 - 1 def get_controller_state(self): return self.current_state def update_controller_state(self, input_vector): self.current_state = input_vector self.set_value(self.leftJoyX, input_vector[0]) self.set_value(self.leftJoyY, input_vector[1]) self.set_value(self.rightJoyX, input_vector[2]) self.set_value(self.rightJoyY, input_vector[3]) self.set_value(self.leftTrigger, input_vector[4]) self.set_value(self.rightTrigger, input_vector[5]) self.set_value(self.leftBumper, int(input_vector[6])) self.set_value(self.rightBumper, int(input_vector[7])) self.set_value(self.a, int(input_vector[8])) self.set_value(self.x, int(input_vector[9])) self.set_value(self.y, int(input_vector[10])) self.set_value(self.b, int(input_vector[11])) self.set_value(self.leftThumb, int(input_vector[12])) self.set_value(self.rightThumb, int(input_vector[13])) #self.set_value(self.back, int(input_vector[14])) #self.set_value(self.start, int(input_vector[15])) dpad = input_vector[16:] if dpad[0] == 1: self.set_value(self.dpad, self.DPAD_LEFT) elif dpad[1] == 1: self.set_value(self.dpad, self.DPAD_RIGHT) elif dpad[2] == 1: self.set_value(self.dpad, self.DPAD_UP) elif dpad[3] == 1: self.set_value(self.dpad, self.DPAD_DOWN) else: self.set_value(self.dpad, self.DPAD_OFF) class ReadController(pyxinput.rController): test = "test" def init_network(): #net = Net() #net = neural_net.StickNet() net = neural_net.GeneratorWithAction() gpu = None if torch.cuda.is_available(): gpu = torch.device("cuda:0") net.load(PATH, gpu=gpu) return net def get_frame_as_tensor(): sct_img = utils.get_frame() sct_img.resize((960, 540)) np_img =
np.asarray(sct_img)
numpy.asarray
import numpy as np from PIL import Image import math def reflexao (mat , m , n ,eixo): x = lambda x : x y = lambda y : y saida = np.zeros([m,n]) if eixo == 1 : x = lambda x: m -1 -x else: y = lambda y: n-1 -y for i in range(m): for j in range(n): saida[i,j] = mat[x(i),y(j)] img = Image.fromarray(saida) Image._show(img) '''def rotacao(mat, m , n , angulo): # usando centro da imagem utilizado como centro de rotação x0 = 0.5 * (m) y0 = 0.5 * (n) #calcula o novo x e y do pixel da imagem x = lambda x, y:int( x*math.cos(math.radians(angulo)) - y*math.sin(math.radians(angulo))) y = lambda x,y: int (x*math.cos(angulo) + y*math.sin(angulo)) saida = np.zeros([m,n]) # a = abs(int(x(m-1,n-1) + x0)) #b = abs(int(y(m-1,n-1) + y0)) saida = np.zeros([m,n]) #print('m:{} n: {}'.format(a,b)) for i in range(m): for j in range(n): xb = int(x(i-x0,j-y0) + x0) yb = int(y(i-x0,j-y0) + y0) #print(xb,yb) if xb < m and xb >=0 and yb >= 0 and yb < n: saida[i,j] = mat[xb,yb] img = Image.fromarray(saida) Image._show(img) ''' if __name__ == '__main__': img = Image.open('bolo1.jpg') #Image._show(img) img = img.convert('L') matriz =
np.asarray(img)
numpy.asarray
""" <NAME> (<EMAIL>) Class to define the Dataset object. """ from PIL import Image import os import numpy as np import scipy.io import pandas as pd class Dataset: def __init__(self, train_df, test_df, val_df, database_root, number_of_slices, store_memory=True): """Initialize the Dataset object Args: train_df (dataframe): Training dataframe from TrainTestSplit.split test_df (dataframe): Testing dataframe from TrainTestSplit.splt val_df (dataframe): Validation dataframe from TrainTestSplit.split database_root (str): db root from config number_of_slices (int): Number of slices per group store_memory (bool, optional): Memory management argument. Defaults to True. """ # for idx, row in train_df.iterrows(): # print(type(row)) # print(row) # #print("Images volumes, {}".format(row.iloc[i*3])) # # #scipy 1.2.3 self.images_train = [] self.images_train_path = [] self.labels_train = [] self.labels_train_path = [] self.labels_liver_train = [] self.labels_liver_train_path = [] if train_df is not None: train_df = pd.read_csv(train_df, delim_whitespace = True) if isinstance(train_df, str) else train_df for idx, row in train_df.iterrows(): if (len(row) > 3): if store_memory: aux_images_train = [] aux_labels_train = [] aux_labels_liver_train = [] for i in range(number_of_slices): mat_file = os.path.join(database_root, str(row.iloc[i * 3])) aux_images_train.append(np.array(scipy.io.loadmat(mat_file)['section'], dtype=np.float32)) self.images_train.append(np.array(aux_images_train)) for i in range(number_of_slices): mat_file = os.path.join(database_root, str(row.iloc[i * 3 + 1])) aux_labels_train.append(np.array(scipy.io.loadmat(mat_file)['section'], dtype=np.float32)) self.labels_train.append(np.array(aux_labels_train)) for i in range(number_of_slices): mat_file = os.path.join(database_root, str(row.iloc[i * 3 + 2])) aux_labels_liver_train.append(np.array(scipy.io.loadmat(mat_file)['section'], dtype=np.float32)) self.labels_liver_train.append(np.array(aux_labels_liver_train)) if (idx + 1) % 1000 == 0: print('Loaded ' + str(idx) + ' train images') aux_images_train_path = [] aux_labels_train_path = [] aux_labels_liver_train_path = [] for i in range(number_of_slices): aux_images_train_path.append(os.path.join(database_root, str(row.iloc[i * 3]))) self.images_train_path.append(np.array(aux_images_train_path)) for i in range(number_of_slices): aux_labels_train_path.append(os.path.join(database_root, str(row.iloc[i * 3 + 1]))) self.labels_train_path.append(np.array(aux_labels_train_path)) for i in range(number_of_slices): aux_labels_liver_train_path.append(os.path.join(database_root, str(row.iloc[i * 3 + 2]))) self.labels_liver_train_path.append(np.array(aux_labels_liver_train_path)) self.images_train_path = np.array(self.images_train_path) self.labels_train_path = np.array(self.labels_train_path) self.labels_liver_train_path = np.array(self.labels_liver_train_path) # Load testing images (path) and labels self.images_test = [] self.images_test_path = [] if test_df is not None: test_df = pd.read_csv(test_df, delim_whitespace = True) if isinstance(test_df, str) else test_df for idx, row in test_df.iterrows(): if (len(row) > 1): if store_memory: aux_images_test = [] for i in range(number_of_slices): mat_file = os.path.join(database_root, str(row.iloc[i * 3])) # os.path.join(database_root, str(line.split()[i * 3])) aux_images_test.append( np.array(scipy.io.loadmat(mat_file)['section'], dtype=np.float32)) self.images_test.append(np.array(aux_images_test)) if (idx + 1) % 1000 == 0: print('Loaded ' + str(idx) + ' test images') aux_images_test_path = [] for i in range(number_of_slices): mat_file = os.path.join(database_root, str(row.iloc[i * 3])) aux_images_test_path.append(mat_file) self.images_test_path.append(np.array(aux_images_test_path)) self.images_val = [] self.images_val_path = [] self.labels_val = [] self.labels_val_path = [] self.labels_liver_val = [] self.labels_liver_val_path = [] if val_df is not None: val_df = pd.read_csv(val_df, delim_whitespace = True) if isinstance(val_df, str) else val_df for idx, row in val_df.iterrows(): if (len(row) > 3): if store_memory: aux_images_val = [] aux_labels_val = [] aux_labels_liver_val = [] for i in range(number_of_slices): mat_file = os.path.join(database_root, str(row.iloc[i * 3])) aux_images_val.append( np.array(scipy.io.loadmat(mat_file)['section'], dtype=np.float32)) self.images_val.append(np.array(aux_images_val)) for i in range(number_of_slices): mat_file = os.path.join(database_root, str(row.iloc[i * 3 + 1])) aux_images_val.append( np.array(scipy.io.loadmat(mat_file)['section'], dtype=np.float32)) self.labels_val.append(np.array(aux_labels_val)) for i in range(number_of_slices): mat_file = os.path.join(database_root, str(row.iloc[i * 3 + 2])) aux_images_val.append( np.array(scipy.io.loadmat(mat_file)['section'], dtype=np.float32)) self.labels_liver_val.append(np.array(aux_labels_liver_val)) if (idx + 1) % 1000 == 0: print('Loaded ' + str(idx) + ' train images') aux_images_val_path = [] aux_labels_val_path = [] aux_labels_liver_val_path = [] for i in range(number_of_slices): aux_images_val_path.append(os.path.join(database_root, str(row.iloc[i * 3]))) self.images_val_path.append(np.array(aux_images_val_path)) for i in range(number_of_slices): aux_labels_val_path.append(os.path.join(database_root, str(row.iloc[i * 3 + 1]))) self.labels_val_path.append(np.array(aux_labels_val_path)) for i in range(number_of_slices): aux_labels_liver_val_path.append(os.path.join(database_root, str(row.iloc[i * 3 + 2]))) self.labels_liver_val_path.append(np.array(aux_labels_liver_val_path)) self.images_val_path = np.array(self.images_val_path) self.labels_val_path = np.array(self.labels_val_path) self.labels_liver_val_path = np.array(self.labels_liver_val_path) print('Done initializing Dataset') # Init parameters self.train_ptr = 0 self.test_ptr = 0 self.val_ptr = 0 self.train_size = len(self.images_train_path) self.test_size = len(self.images_test_path) self.val_size = len(self.images_val_path) self.train_idx = np.arange(self.train_size) self.val_idx = np.arange(self.val_size) np.random.shuffle(self.train_idx) np.random.shuffle(self.val_idx) self.store_memory = store_memory def next_batch(self, batch_size, phase): """Get next batch of image (path) and labels Args: batch_size: Size of the batch phase: Possible options:'train' or 'test' Returns in training: images: List of images paths if store_memory=False, List of Numpy arrays of the images if store_memory=True labels: List of labels paths if store_memory=False, List of Numpy arrays of the labels if store_memory=True Returns: images: None if store_memory=False, Numpy array of the image if store_memory=True path: List of image paths """ if phase == 'train': if self.train_ptr + batch_size < self.train_size: idx = np.array(self.train_idx[self.train_ptr:self.train_ptr + batch_size]) if self.store_memory: images = [self.images_train[l] for l in idx] labels = [self.labels_train[l] for l in idx] labels_liver = [self.labels_liver[l] for l in idx] else: images = [self.images_train_path[l] for l in idx] labels = [self.labels_train_path[l] for l in idx] labels_liver = [self.labels_liver_train_path[l] for l in idx] self.train_ptr += batch_size else: old_idx = np.array(self.train_idx[self.train_ptr:]) np.random.shuffle(self.train_idx) new_ptr = (self.train_ptr + batch_size) % self.train_size idx = np.array(self.train_idx[:new_ptr]) if self.store_memory: images_1 = [self.images_train[l] for l in old_idx] labels_1 = [self.labels_train[l] for l in old_idx] labels_liver_1 = [self.labels_liver_train[l] for l in old_idx] images_2 = [self.images_train[l] for l in idx] labels_2 = [self.labels_train[l] for l in idx] labels_liver_2 = [self.labels_liver_train[l] for l in idx] else: images_1 = [self.images_train_path[l] for l in old_idx] labels_1 = [self.labels_train_path[l] for l in old_idx] labels_liver_1 = [self.labels_liver_train_path[l] for l in old_idx] images_2 = [self.images_train_path[l] for l in idx] labels_2 = [self.labels_train_path[l] for l in idx] labels_liver_2 = [self.labels_liver_train_path[l] for l in idx] images = images_1 + images_2 labels = labels_1 + labels_2 labels_liver = labels_liver_1 + labels_liver_2 self.train_ptr = new_ptr return images, labels, labels_liver if phase == 'val': if self.val_ptr + batch_size < self.val_size: idx = np.array(self.val_idx[self.val_ptr:self.val_ptr + batch_size]) if self.store_memory: images = [self.images_val[l] for l in idx] labels = [self.labels_val[l] for l in idx] labels_liver = [self.labels_liver_val[l] for l in idx] else: images = [self.images_val_path[l] for l in idx] labels = [self.labels_val_path[l] for l in idx] labels_liver = [self.labels_liver_val_path[l] for l in idx] self.val_ptr += batch_size else: old_idx = np.array(self.val_idx[self.val_ptr:]) np.random.shuffle(self.val_idx) new_ptr = (self.val_ptr + batch_size) % self.val_size idx =
np.array(self.val_idx[:new_ptr])
numpy.array
import numpy as np import sys sys.path.append('../tools') import tools from tqdm import tqdm def Mini_Batch_Gradient_Descent(X,y,parameters,gradient_func,predict_func,learning_rate=0.001,epochs=200,batch_size=1,loss="mse"): """ Mini Batch gradient descent Parameters: X = np.array() data matrix y = np.array() labels parameters = np.array() weights gradients_func = function to calculate the gradient predict_func = function to predict labels with data matrix """ h = predict_func(X,parameters) bar = tqdm(np.arange(epochs)) for i in bar: indices = np.arange(X.shape[0]) np.random.shuffle(indices) sample = 0 while(sample < X.shape[0]): batch_X = X[indices[sample:(sample+batch_size)]] batch_y = y[indices[sample:(sample+batch_size)]] batch_h = h[indices[sample:(sample+batch_size)]] sample += batch_size parameters = parameters - learning_rate*gradient_func(parameters,batch_X,batch_y) h = predict_func(X,parameters) if loss == "mse": bar.set_description("MSE %s" % str(tools.mean_squared_error(h,y))) elif loss == "cross_entropy": bar.set_description("Cross Entropy %s" % str(tools.cross_entropy(h,y))) return parameters def CnstrPD(n, a): RM = np.random.randn(n,n) q,r = np.linalg.qr(RM) z = (np.random.rand(n)+a) A = q.dot(np.diag(z)).dot(q.T) return A def Jacobi(A,b,e): D =
np.diag(A)
numpy.diag
import numpy as np from GPmodel import GaussianProcess import os from singlemes import MaxvalueEntropySearch from scipy.optimize import minimize as scipyminimize from platypus import NSGAII, Problem, Real import sobol_seq from pygmo import hypervolume from design_space_bounds import parameter_bounds_small_design, parameter_bounds_medium_design from sklearn.preprocessing import MinMaxScaler from config import conf import matplotlib.pyplot as plt import sys import DeepSparseKernel as dsk def find_neighbor(feature, x_best): distance = np.linalg.norm(feature - x_best, axis=1) #print(distance) index = np.argmin(distance) return index def multi_output_gassian(train_x, train_y): num_shared_layer = conf["num_shared_layer"] num_non_shared_layer = conf["num_non_shared_layer"] hidden_shared = conf["hidden_shared"] hidden_non_shared = conf["hidden_non_shared"] l1 = conf["l1"] l2 = conf["l2"] scale = conf["scale"] max_iter = conf["max_iter"] K = conf["K"] activation = conf["activation"] # act_f = dsk.tanh if activation == "relu": act_f = dsk.relu elif activation == "erf": act_f = dsk.erf elif activation == "sigmoid": act_f = dsk.sigmoid else: act_f = dsk.tanh # dim, num_train = train_x.shape num_obj = train_y.shape[1] # num_test = test_x.shape[1] shared_layers_sizes = [hidden_shared] * num_shared_layer shared_activations = [dsk.tanh] * num_shared_layer non_shared_layers_sizes = [hidden_non_shared] * num_non_shared_layer non_shared_activations = [dsk.tanh] * num_non_shared_layer shared_nn = dsk.NN(shared_layers_sizes, shared_activations) non_shared_nns = [] for i in range(num_obj): non_shared_nns += [dsk.NN(non_shared_layers_sizes, non_shared_activations)] modsk = dsk.MODSK(train_x, train_y, shared_nn, non_shared_nns, debug=True, max_iter=max_iter, l1=l1, l2=l2) return modsk paths='.' dim = 4 total_iterations = 1 seed = 0 np.random.seed(seed) intial_number = 1 bound = [0,1] sample_number = 1 Fun_bounds = [bound] * dim xValues = [] yValues = [] mat = np.genfromtxt("small-design-parameter-tuning.csv", delimiter=',', dtype='float') total_power = mat[:,5] total_power_max = np.max(total_power) #(total_power_max) total_cell_area = mat[:,4] total_cell_area_max = np.max(total_cell_area) #print(total_cell_area_max) all_tns = mat[:,6] all_tns_max = np.max(all_tns) #(all_tns_max) referencePoint = [float(total_cell_area_max), float(total_power_max), float(all_tns_max)] # train = mat[:200, :] # test = mat[200:, :] # train_x = train[:, :4].T # train_y = train[:, 4:7] # test_x = test[:, :4].T # test_y = test[:, 4:7] feature = mat[:,:4] target = mat[:, 4:7] num_target = target.shape[1] print(num_target) # total_power = mat[:,5] # total_power_max = np.max(total_power) # #(total_power_max) # total_cell_area = mat[:,4] # total_cell_area_max = np.max(total_cell_area) # #print(total_cell_area_max) # all_tns = mat[:,6] # all_tns_max = np.max(all_tns) # #(all_tns_max) # referencePoint = [float(total_cell_area_max), float(total_power_max), float(all_tns_max)] # functions = [total_cell_area, total_power, all_tns] design_index = np.random.randint(0, mat.shape[0] - 1) Multiplemes = [] for k in range(intial_number): exist = True while exist: design_index = np.random.randint(0, mat.shape[0] - 1) x_rand = feature[design_index, :].tolist() #print(x_rand) if (any((x_rand == x).all() for x in xValues)) == False: exist = False xValues.append(x_rand) yValues.append(target[design_index, :].tolist()) print(design_index) print(np.asarray(xValues).T.shape) print(np.asarray(yValues).shape) GP_model = multi_output_gassian(np.asarray(xValues).T, np.asarray(yValues)) for i in range(target.shape[1]): Multiplemes.append(MaxvalueEntropySearch(GP_model, np.asarray(xValues), np.asarray(yValues)[:, i], dim)) input_output= open(os.path.join(paths,'input_output_small_design.txt'), "a") for j in range(np.asarray(yValues).shape[0]): input_output.write(str(np.asarray(xValues)[j])+'---'+str(np.asarray(yValues)[j]) +'\n' ) input_output.close() for l in range(total_iterations): for i in range(num_target): Multiplemes[i] = MaxvalueEntropySearch(GP_model, np.asarray(xValues), np.asarray(yValues)[:, i], dim) Multiplemes[i].Sampling_RFM() max_samples = [] for j in range(sample_number): for i in range(num_target): Multiplemes[i].weigh_sampling() cheap_pareto_front=[] def CMO(xi): xi = np.asarray(xi) y = [Multiplemes[i].f_regression(xi)[0][0] for i in range(num_target)] return y problem = Problem(dim, num_target) problem.types[:] = Real(bound[0], bound[1]) problem.function = CMO algorithm = NSGAII(problem) algorithm.run(1500) cheap_pareto_front = [list(solution.objectives) for solution in algorithm.result] #########picking the max over the pareto: best case maxoffunctions = [-1 * min(f) for f in list(zip(*cheap_pareto_front))] max_samples.append(maxoffunctions) def mesmo_acq(x): multi_obj_acq_total = 0 for j in range(sample_number): multi_obj_acq_sample = 0 for i in range(num_target): multi_obj_acq_sample = multi_obj_acq_sample + Multiplemes[i].single_acq(x, max_samples[j][i]) multi_obj_acq_total = multi_obj_acq_total + multi_obj_acq_sample return (multi_obj_acq_total / sample_number) x_tries = feature y_tries = [mesmo_acq(x) for x in x_tries] sorted_indecies =
np.argsort(y_tries)
numpy.argsort
import numpy as np from pgmpy.factors.discrete import TabularCPD # type: ignore from pycid.core.macid import MACID def get_basic_subgames() -> MACID: macid = MACID( [ ("D11", "U11"), ("D11", "U2"), ("D11", "D12"), ("X1", "U11"), ("X1", "D11"), ("X1", "D2"), ("X1", "U3"), ("D2", "U2"), ("D2", "U3"), ("D2", "D3"), ("D3", "U2"), ("D3", "U3"), ("D12", "U3"), ("D12", "U22"), ("X2", "U22"), ("X2", "D12"), ], agent_decisions={ 0: ["D11", "D12"], 1: ["D2"], 2: ["D3"], }, agent_utilities={ 0: ["U11"], 1: ["U2", "U22"], 2: ["U3"], }, ) return macid def get_basic_subgames2() -> MACID: macid = MACID( [ ("X2", "U3"), ("X2", "D1"), ("D3", "U3"), ("D3", "U2"), ("D1", "U1"), ("D1", "U2"), ("D2", "U1"), ("D2", "U2"), ("D4", "U1"), ("D4", "D2"), ("D4", "U4"), ("X1", "D4"), ("X1", "U4"), ], agent_decisions={ 1: ["D1"], 2: ["D2"], 3: ["D3"], 4: ["D4"], }, agent_utilities={ 1: ["U1"], 2: ["U2"], 3: ["U3"], 4: ["U4"], }, ) return macid def get_basic_subgames3() -> MACID: macid = MACID( [ ("D4", "U4"), ("D2", "U4"), ("D3", "U4"), ("D2", "U2"), ("D3", "U3"), ("D1", "U2"), ("D1", "U3"), ("D1", "U1"), ], agent_decisions={ 1: ["D1"], 2: ["D2"], 3: ["D3"], 4: ["D4"], }, agent_utilities={ 1: ["U1"], 2: ["U2"], 3: ["U3"], 4: ["U4"], }, ) return macid def get_path_example() -> MACID: macid = MACID( [("X1", "X3"), ("X1", "D"), ("X2", "D"), ("X2", "U"), ("D", "U")], agent_decisions={1: ["D"]}, agent_utilities={1: ["U"]}, ) return macid def basic2agent_tie_break() -> MACID: macid = MACID( [("D1", "D2"), ("D1", "U1"), ("D1", "U2"), ("D2", "U2"), ("D2", "U1")], agent_decisions={0: ["D1"], 1: ["D2"]}, agent_utilities={0: ["U1"], 1: ["U2"]}, ) cpd_d1 = [0, 1] cpd_d2 = [0, 1] cpd_u1 = TabularCPD( "U1", 6, np.array([[0, 1, 0, 0], [0, 0, 0, 1], [0, 0, 0, 0], [1, 0, 1, 0], [0, 0, 0, 0], [0, 0, 0, 0]]), evidence=["D1", "D2"], evidence_card=[2, 2], ) cpd_u2 = TabularCPD( "U2", 6, np.array([[0, 0, 0, 0], [1, 0, 0, 0], [0, 0, 1, 1], [0, 0, 0, 0], [0, 0, 0, 0], [0, 1, 0, 0]]), evidence=["D1", "D2"], evidence_card=[2, 2], ) macid.add_cpds(D1=cpd_d1, D2=cpd_d2, U1=cpd_u1, U2=cpd_u2) return macid def two_agent_one_pne() -> MACID: """This macim is a simultaneous two player game and has a parameterisation that corresponds to the following normal form game - where the row player is agent 1, and the column player is agent 2 +----------+----------+----------+ | | Act(0) | Act(1) | +----------+----------+----------+ | Act(0) | 1, 2 | 3, 0 | +----------+----------+----------+ | Act(1) | 0, 3 | 2, 2 | +----------+----------+----------+ """ macid = MACID( [("D1", "U1"), ("D1", "U2"), ("D2", "U2"), ("D2", "U1")], agent_decisions={1: ["D1"], 2: ["D2"]}, agent_utilities={1: ["U1"], 2: ["U2"]}, ) agent1_payoff = np.array([[1, 3], [0, 2]]) agent2_payoff = np.array([[2, 0], [3, 2]]) macid.add_cpds( D1=[0, 1], D2=[0, 1], U1=lambda d1, d2: agent1_payoff[d1, d2], U2=lambda d1, d2: agent2_payoff[d1, d2] ) return macid def two_agent_two_pne() -> MACID: """This macim is a simultaneous two player game and has a parameterisation that corresponds to the following normal form game - where the row player is agent 0, and the column player is agent 1 +----------+----------+----------+ | | Act(0) | Act(1) | +----------+----------+----------+ | Act(0) | 1, 1 | 4, 2 | +----------+----------+----------+ | Act(1) | 2, 4 | 3, 3 | +----------+----------+----------+ """ macid = MACID( [("D1", "U1"), ("D1", "U2"), ("D2", "U2"), ("D2", "U1")], agent_decisions={0: ["D1"], 1: ["D2"]}, agent_utilities={0: ["U1"], 1: ["U2"]}, ) cpd_u1 = TabularCPD( "U1", 5, np.array([[0, 0, 0, 0], [1, 0, 0, 0], [0, 0, 1, 0], [0, 0, 0, 1], [0, 1, 0, 0]]), evidence=["D1", "D2"], evidence_card=[2, 2], ) cpd_u2 = TabularCPD( "U2", 5, np.array([[0, 0, 0, 0], [1, 0, 0, 0], [0, 1, 0, 0], [0, 0, 0, 1], [0, 0, 1, 0]]), evidence=["D1", "D2"], evidence_card=[2, 2], ) macid.add_cpds(cpd_u1, cpd_u2, D1=[0, 1], D2=[0, 1]) return macid def two_agent_no_pne() -> MACID: """This macim is a simultaneous two player game and has a parameterisation that corresponds to the following normal form game - where the row player is agent 0, and the column player is agent 1 +----------+----------+----------+ | | Act(0) | Act(1) | +----------+----------+----------+ | Act(0) | 1, 0 | 0, 1 | +----------+----------+----------+ | Act(1) | 0, 1 | 1, 0 | +----------+----------+----------+ """ macid = MACID( [("D1", "U1"), ("D1", "U2"), ("D2", "U2"), ("D2", "U1")], agent_decisions={0: ["D1"], 1: ["D2"]}, agent_utilities={0: ["U1"], 1: ["U2"]}, ) cpd_u1 = TabularCPD("U1", 2,
np.array([[0, 1, 1, 0], [1, 0, 0, 1]])
numpy.array
# Copyright (c) 2003-2015 by <NAME> # # TreeCorr is free software: redistribution and use in source and binary forms, # with or without modification, are permitted provided that the following # conditions are met: # # 1. Redistributions of source code must retain the above copyright notice, this # list of conditions, and the disclaimer given in the accompanying LICENSE # file. # 2. Redistributions in binary form must reproduce the above copyright notice, # this list of conditions, and the disclaimer given in the documentation # and/or other materials provided with the distribution. from __future__ import print_function import numpy import treecorr import os from numpy import pi from test_helper import get_from_wiki def test_ascii(): nobj = 5000 numpy.random.seed(8675309) x = numpy.random.random_sample(nobj) y = numpy.random.random_sample(nobj) z = numpy.random.random_sample(nobj) ra = numpy.random.random_sample(nobj) dec = numpy.random.random_sample(nobj) r = numpy.random.random_sample(nobj) w = numpy.random.random_sample(nobj) g1 = numpy.random.random_sample(nobj) g2 = numpy.random.random_sample(nobj) k = numpy.random.random_sample(nobj) flags = numpy.zeros(nobj).astype(int) for flag in [ 1, 2, 4, 8, 16 ]: sub = numpy.random.random_sample(nobj) < 0.1 flags[sub] = numpy.bitwise_or(flags[sub], flag) file_name = os.path.join('data','test.dat') with open(file_name, 'w') as fid: # These are intentionally in a different order from the order we parse them. fid.write('# ra,dec,x,y,k,g1,g2,w,flag,z,r\n') for i in range(nobj): fid.write((('%.8f '*10)+'%d\n')%( ra[i],dec[i],x[i],y[i],k[i],g1[i],g2[i],w[i],z[i],r[i],flags[i])) # Check basic input config = { 'x_col' : 3, 'y_col' : 4, 'z_col' : 9, 'x_units' : 'rad', 'y_units' : 'rad', 'w_col' : 8, 'g1_col' : 6, 'g2_col' : 7, 'k_col' : 5, } cat1 = treecorr.Catalog(file_name, config) numpy.testing.assert_almost_equal(cat1.x, x) numpy.testing.assert_almost_equal(cat1.y, y) numpy.testing.assert_almost_equal(cat1.z, z) numpy.testing.assert_almost_equal(cat1.w, w) numpy.testing.assert_almost_equal(cat1.g1, g1) numpy.testing.assert_almost_equal(cat1.g2, g2) numpy.testing.assert_almost_equal(cat1.k, k) # Check flags config['flag_col'] = 11 cat2 = treecorr.Catalog(file_name, config) numpy.testing.assert_almost_equal(cat2.w[flags==0], w[flags==0]) numpy.testing.assert_almost_equal(cat2.w[flags!=0], 0.) # Check ok_flag config['ok_flag'] = 4 cat3 = treecorr.Catalog(file_name, config) numpy.testing.assert_almost_equal(cat3.w[numpy.logical_or(flags==0, flags==4)], w[numpy.logical_or(flags==0, flags==4)]) numpy.testing.assert_almost_equal(cat3.w[numpy.logical_and(flags!=0, flags!=4)], 0.) # Check ignore_flag del config['ok_flag'] config['ignore_flag'] = 16 cat4 = treecorr.Catalog(file_name, config) numpy.testing.assert_almost_equal(cat4.w[flags < 16], w[flags < 16]) numpy.testing.assert_almost_equal(cat4.w[flags >= 16], 0.) # Check different units for x,y config['x_units'] = 'arcsec' config['y_units'] = 'arcsec' del config['z_col'] cat5 = treecorr.Catalog(file_name, config) numpy.testing.assert_almost_equal(cat5.x, x * (pi/180./3600.)) numpy.testing.assert_almost_equal(cat5.y, y * (pi/180./3600.)) config['x_units'] = 'arcmin' config['y_units'] = 'arcmin' cat5 = treecorr.Catalog(file_name, config) numpy.testing.assert_almost_equal(cat5.x, x * (pi/180./60.)) numpy.testing.assert_almost_equal(cat5.y, y * (pi/180./60.)) config['x_units'] = 'deg' config['y_units'] = 'deg' cat5 = treecorr.Catalog(file_name, config) numpy.testing.assert_almost_equal(cat5.x, x * (pi/180.)) numpy.testing.assert_almost_equal(cat5.y, y * (pi/180.)) del config['x_units'] # Default is radians del config['y_units'] cat5 = treecorr.Catalog(file_name, config) numpy.testing.assert_almost_equal(cat5.x, x) numpy.testing.assert_almost_equal(cat5.y, y) # Check ra,dec del config['x_col'] del config['y_col'] config['ra_col'] = 1 config['dec_col'] = 2 config['r_col'] = 10 config['ra_units'] = 'rad' config['dec_units'] = 'rad' cat6 = treecorr.Catalog(file_name, config) numpy.testing.assert_almost_equal(cat6.ra, ra) numpy.testing.assert_almost_equal(cat6.dec, dec) config['ra_units'] = 'deg' config['dec_units'] = 'deg' cat6 = treecorr.Catalog(file_name, config) numpy.testing.assert_almost_equal(cat6.ra, ra * (pi/180.)) numpy.testing.assert_almost_equal(cat6.dec, dec * (pi/180.)) config['ra_units'] = 'hour' config['dec_units'] = 'deg' cat6 = treecorr.Catalog(file_name, config) numpy.testing.assert_almost_equal(cat6.ra, ra * (pi/12.)) numpy.testing.assert_almost_equal(cat6.dec, dec * (pi/180.)) # Check using a different delimiter, comment marker csv_file_name = os.path.join('data','test.csv') with open(csv_file_name, 'w') as fid: # These are intentionally in a different order from the order we parse them. fid.write('% This file uses commas for its delimiter') fid.write('% And more than one header line.') fid.write('% Plus some extra comment lines every so often.') fid.write('% And we use a weird comment marker to boot.') fid.write('% ra,dec,x,y,k,g1,g2,w,flag\n') for i in range(nobj): fid.write((('%.8f,'*10)+'%d\n')%( ra[i],dec[i],x[i],y[i],k[i],g1[i],g2[i],w[i],z[i],r[i],flags[i])) if i%100 == 0: fid.write('%%%% Line %d\n'%i) config['delimiter'] = ',' config['comment_marker'] = '%' cat7 = treecorr.Catalog(csv_file_name, config) numpy.testing.assert_almost_equal(cat7.ra, ra * (pi/12.)) numpy.testing.assert_almost_equal(cat7.dec, dec * (pi/180.)) numpy.testing.assert_almost_equal(cat7.r, r) numpy.testing.assert_almost_equal(cat7.g1, g1) numpy.testing.assert_almost_equal(cat7.g2, g2) numpy.testing.assert_almost_equal(cat7.w[flags < 16], w[flags < 16]) numpy.testing.assert_almost_equal(cat7.w[flags >= 16], 0.) # Check flip_g1, flip_g2 del config['delimiter'] del config['comment_marker'] config['flip_g1'] = True cat8 = treecorr.Catalog(file_name, config) numpy.testing.assert_almost_equal(cat8.g1, -g1) numpy.testing.assert_almost_equal(cat8.g2, g2) config['flip_g2'] = 'true' cat8 = treecorr.Catalog(file_name, config) numpy.testing.assert_almost_equal(cat8.g1, -g1) numpy.testing.assert_almost_equal(cat8.g2, -g2) config['flip_g1'] = 'n' config['flip_g2'] = 'yes' cat8 = treecorr.Catalog(file_name, config) numpy.testing.assert_almost_equal(cat8.g1, g1) numpy.testing.assert_almost_equal(cat8.g2, -g2) # Check overriding values with kwargs cat8 = treecorr.Catalog(file_name, config, flip_g1=True, flip_g2=False) numpy.testing.assert_almost_equal(cat8.g1, -g1) numpy.testing.assert_almost_equal(cat8.g2, g2) def test_fits(): get_from_wiki('Aardvark.fit') file_name = os.path.join('data','Aardvark.fit') config = treecorr.read_config('Aardvark.yaml') config['verbose'] = 1 # Just test a few random particular values cat1 = treecorr.Catalog(file_name, config) numpy.testing.assert_equal(len(cat1.ra), 390935) numpy.testing.assert_equal(cat1.nobj, 390935) numpy.testing.assert_almost_equal(cat1.ra[0], 56.4195 * (pi/180.)) numpy.testing.assert_almost_equal(cat1.ra[390934], 78.4782 * (pi/180.)) numpy.testing.assert_almost_equal(cat1.dec[290333], 83.1579 * (pi/180.)) numpy.testing.assert_almost_equal(cat1.g1[46392], 0.0005066675) numpy.testing.assert_almost_equal(cat1.g2[46392], -0.0001006742) numpy.testing.assert_almost_equal(cat1.k[46392], -0.0008628797) # The catalog doesn't have x, y, or w, but test that functionality as well. del config['ra_col'] del config['dec_col'] config['x_col'] = 'RA' config['y_col'] = 'DEC' config['w_col'] = 'MU' config['flag_col'] = 'INDEX' config['ignore_flag'] = 64 cat2 = treecorr.Catalog(file_name, config) numpy.testing.assert_almost_equal(cat2.x[390934], 78.4782, decimal=4) numpy.testing.assert_almost_equal(cat2.y[290333], 83.1579, decimal=4) numpy.testing.assert_almost_equal(cat2.w[46392], 0.) # index = 1200379 numpy.testing.assert_almost_equal(cat2.w[46393], 0.9995946) # index = 1200386 # Test using a limited set of rows config['first_row'] = 101 config['last_row'] = 50000 cat3 = treecorr.Catalog(file_name, config) numpy.testing.assert_equal(len(cat3.x), 49900) numpy.testing.assert_equal(cat3.ntot, 49900) numpy.testing.assert_equal(cat3.nobj, sum(cat3.w != 0)) numpy.testing.assert_equal(cat3.sumw, sum(cat3.w)) numpy.testing.assert_equal(cat3.sumw, sum(cat2.w[100:50000])) numpy.testing.assert_almost_equal(cat3.g1[46292], 0.0005066675) numpy.testing.assert_almost_equal(cat3.g2[46292], -0.0001006742) numpy.testing.assert_almost_equal(cat3.k[46292], -0.0008628797) def test_direct(): nobj = 5000 numpy.random.seed(8675309) x = numpy.random.random_sample(nobj) y = numpy.random.random_sample(nobj) ra = numpy.random.random_sample(nobj) dec = numpy.random.random_sample(nobj) w = numpy.random.random_sample(nobj) g1 = numpy.random.random_sample(nobj) g2 = numpy.random.random_sample(nobj) k = numpy.random.random_sample(nobj) cat1 = treecorr.Catalog(x=x, y=y, w=w, g1=g1, g2=g2, k=k) numpy.testing.assert_almost_equal(cat1.x, x) numpy.testing.assert_almost_equal(cat1.y, y) numpy.testing.assert_almost_equal(cat1.w, w)
numpy.testing.assert_almost_equal(cat1.g1, g1)
numpy.testing.assert_almost_equal
# To add a new cell, type '# %%' # To add a new markdown cell, type '# %% [markdown]' # %% [markdown] # # Dependencies # Created by wrborrelli # %% import sys import itertools import matplotlib.pyplot as plt from scipy.spatial import ConvexHull from scipy.optimize import linprog from scipy.optimize import lsq_linear from scipy.spatial import HalfspaceIntersection import numpy as np from numpy.linalg import lstsq import pint from pint import UnitRegistry units = UnitRegistry() Q_ = units.Quantity # %% [markdown] # # Sample Inputs # %% reagent1= {'Gamma-Butyrolactone': '0.0 M'} reagent2= {'Lead Diiodide': '1.81 M', 'Formamidinium Iodide': '1.36 M', 'Gamma-Butyrolactone': '0.0 M'} reagent3 ={'Formamidinium Iodide': '2.63 M', 'Gamma-Butyrolactone': '0.0 M'} reagent7= {'Formic Acid': '26.5 M'} reagents = [reagent1, reagent2, reagent3, reagent7] descriptions=['Reagent1', 'Reagent2', 'Reagent3', 'Reagent7'] # %% nExpt = 96 maxMolarity = 15.0 finalVolume = '500 ul' # %% [markdown] # ## Helper Functions # %% def get_hull_centroid(hull: ConvexHull): """ Returns the centroid of the supplied scipy convex hull object. Args: hull: a scipy convex hull object Returns: np.array() of centroids for each axis. >>> get_hull_centroid(ConvexHull(np.array([[1.8, 0., 0.],[0. , 0., 0.], [0., 0., 26.5], [0., 2., 1.]]))) array([0.45, 0.5, 6.875]) """ return np.array([np.mean(hull.points[hull.vertices, i]) for i in range(len(hull.points) - 1)]) # %% def convex_hull_intersection(points1: np.ndarray, points2: np.ndarray, vis2d=False): """ Returns the points corresponding to the intersecting region of two convex hulls (up to however many dimensions scipy ConvexHull takes (9D I think). Args: points1: np.array() of points corresponding to the first convex hull. points2: np.array() of points corresponding to the second convex hull. vis2d: True/False if you want to visualize the resulting region (2D hulls only) Returns: np.array() of points corresponding to the intersection region. """ assert points1.shape[1] == points2.shape[1] hull1 = ConvexHull(points1) hull2 = ConvexHull(points2) A = np.vstack((hull1.equations[:, :-1], hull2.equations[:, :-1])) b = np.hstack((hull1.equations[:, -1], hull2.equations[:, -1])) res = linprog(c=np.zeros(A.shape[1]), A_ub=A, b_ub=-b, method="interior-point") feasible_point = res.x hint = HalfspaceIntersection(np.vstack((hull1.equations, hull2.equations)), feasible_point) if vis2d: fig = plt.figure() ax = fig.add_subplot(1, 1, 1, aspect='equal') xlim, ylim = (0, 1), (0, 1) ax.set_xlim(xlim) ax.set_ylim(ylim) for simplex in hull1.simplices: ax.plot(points1[simplex, 0], points1[simplex, 1], 'r-') for simplex in hull2.simplices: ax.plot(points2[simplex, 0], points2[simplex, 1], 'b-') x, y = zip(*hint.intersections) ax.plot(x, y, 'k^', markersize=8) plt.savefig("{}".format(__file__).replace(".py", ".png")) return hint.intersections # %% def bb_to_cds(bb): """ Converts bounding box notation to vertex coordinates. Args: bb: list of lists of bounding box notation [[mins], [maxes]] corresponding to the mins and maxes for each axis. Returns: np.array() of points corresponding to the vertices of the bounding box. """ outp = list(itertools.product(*bb)) out = [] for i in outp: temp = [] for j in i: if isinstance(j, list): for k in j: temp.append(k) else: temp.append(j) out.append(temp) return np.array(out) # %% def bb_cds(corners): """ Returns a list of the mins and maxes for each axis in a bounding box, given the corners of concentration space. Args: corners: np.array() of points corresponding to the corners of the concentration space. Returns: list of [[mins], [maxes]] defining the resulting bounding box. """ tarray = np.transpose(corners) maxes = [max(tarray[i]) for i in range(len(corners[0]))] mins = [min(tarray[i]) for i in range(len(corners[0]))] return [mins, maxes] # %% def box_int(b1, b2): """ Gets the coordinates of the overlapping region for two n-dimensional hypercubes. Args: b1: list of lists in bounding box notation [[mins], [maxes]] for each axis of box 1 b2: list of lists in bounding box notation [[mins], [maxes]] for each axis of box 2 Returns: List of the coordinates for the overlapping region (returns 0 for no overlap). """ olap_cds = [] for i in range(len(b1.T)): if (b1.T[i][0] <= b2.T[i][0]): None else: b1, b2 = b2, b1 if ((b1.T[i][0] <= b1.T[i][1]) and (b1.T[i][1] <= b2.T[i][0]) and (b2.T[i][0] <= b2.T[i][1])): return 0 elif ((b1.T[i][0] <= b2.T[i][0]) and (b2.T[i][0] <= b1.T[i][1]) and (b1.T[i][1] <= b2.T[i][1])): olap_cds.append([b2.T[i][0], b1.T[i][1]]) elif ((b1.T[i][0] <= b2.T[i][0]) and (b2.T[i][0] <= b2.T[i][1]) and (b2.T[i][1] <= b1.T[i][1])): olap_cds.append([b2.T[i][0], b2.T[i][1]]) return olap_cds # %% def in_hull(points, x): """ Tests if a point is inside the ConvexHull given by points. Args: points: np.array() of points defining the ConvexHull. x: point to be tested for inclusion in the Convexhull. Returns: True: point is inside hull. False: point is not inside hull """ n_points = len(points) n_dim = len(x) c = np.zeros(n_points) A = np.r_[points.T, np.ones((1, n_points))] b = np.r_[x, np.ones(1)] lp = linprog(c, A_eq=A, b_eq=b) return lp.success # %% [markdown] # ## Sampling Functions # %% def allowedExperiments(reagents, maxConcentration, minConcentration): """ Find the allowed ConvexHull given the reagent definitions and max/min concentration. Note that, relative to the Mathematica code, the location of max and min concentration in the function arguments are swapped. This allows for the case where you only want to give a max concentration. Because this generates a scipy ConvexHull, it is susceptible to dimensional constraints. Args: reagents: dictionary of reagent definitions. maxConcentration: the maximum concentration imposed. minConcentration: the minimum concentration imposed. Returns: scipy ConvexHull defining the allowed experimental sampling region. """ compositionBoundary = np.array(list(reagents.values())) # array of convex hull points minMax = [] # list to format imposedBoundary points if ((type(minConcentration) is list) and (type(maxConcentration)) is list): # run this if both min/max Concentrations are given as lists for i in range(len(minConcentration)): # formats imposedBoundary into coords minMax.append([minConcentration[i], maxConcentration[i]]) imposedBoundary = np.array(minMax) # array of imposedBoundary points return ConvexHull(convex_hull_intersection(compositionBoundary, bb_to_cds(imposedBoundary))) # return the intersection convex hull else: return print('error') # or print an error def allowedExperiments(reagents, maxConcentration, minConcentration=None): """ Find the allowed ConvexHull given the reagent definitions and max/min concentration. Note that, relative to the Mathematica code, the location of max and min concentration in the function arguments are swapped. This allows for the case where you only want to give a max concentration. Because this generates a scipy ConvexHull, it is susceptible to dimensional constraints. Args: reagents: dictionary of reagent definitions. maxConcentration: the maximum concentration imposed. minConcentration: (optional) the minimum concentration imposed (0 otherwise). Returns: scipy ConvexHull defining the allowed experimental sampling region. """ if ((type(maxConcentration) is float) or (type(maxConcentration) is int)): # run this if only maxConcentration is given and it's a float or int correctDimensionalityVector = ([1]*len(np.array(list(reagents.values()))[0])) compositionBoundary = np.array(list(reagents.values())) minMax = [] minConcVec = ([0]*len(correctDimensionalityVector)) # min [] vec is 0's maxConcVec = ([maxConcentration]*len(correctDimensionalityVector)) # max [] vec is maxConc repeated to correct dimension for i in range(len(correctDimensionalityVector)): minMax.append(([minConcVec[i], maxConcVec[i]])) imposedBoundary = np.array(minMax) return ConvexHull(convex_hull_intersection(compositionBoundary, bb_to_cds(imposedBoundary))) elif type(maxConcentration) is list: # run this if only maxConcentration is given and it's a list compositionBoundary = np.array(list(reagents.values())) minMax = [] minConcVec = ([0]*len(maxConcentration)) # min [] vec is 0's maxConcVec = maxConcentration # max [] vec is the list maxConcentration for i in range(len(maxConcentration)): minMax.append(([minConcVec[i], maxConcVec[i]])) imposedBoundary = np.array(minMax) return ConvexHull(convex_hull_intersection(compositionBoundary, bb_to_cds(imposedBoundary))) else: return print('error') # %% def sampleConcentrations(allowedHull, nExpts=96): """ Randomly samples nExpts # of experiments within an allowed ConvexHull. Args: allowedHull: A scipy ConvexHull that defines the allowed sampling region. This input should be what allowedExperiments() returns. nExpts: (optional) The number of experiments to be sampled (default is 96). """ bbox = [allowedHull.min_bound, allowedHull.max_bound] pts = [] while len(pts) < nExpts: rand_pt = [
np.random.uniform(bbox[0][i], bbox[1][i])
numpy.random.uniform
# This module has been generated automatically from space group information # obtained from the Computational Crystallography Toolbox # """ Space groups This module contains a list of all the 230 space groups that can occur in a crystal. The variable space_groups contains a dictionary that maps space group numbers and space group names to the corresponding space group objects. .. moduleauthor:: <NAME> <<EMAIL>> """ #----------------------------------------------------------------------------- # Copyright (C) 2013 The Mosaic Development Team # # Distributed under the terms of the BSD License. The full license is in # the file LICENSE.txt, distributed as part of this software. #----------------------------------------------------------------------------- import numpy as N class SpaceGroup(object): """ Space group All possible space group objects are created in this module. Other modules should access these objects through the dictionary space_groups rather than create their own space group objects. """ def __init__(self, number, symbol, transformations): """ :param number: the number assigned to the space group by international convention :type number: int :param symbol: the Hermann-Mauguin space-group symbol as used in PDB and mmCIF files :type symbol: str :param transformations: a list of space group transformations, each consisting of a tuple of three integer arrays (rot, tn, td), where rot is the rotation matrix and tn/td are the numerator and denominator of the translation vector. The transformations are defined in fractional coordinates. :type transformations: list """ self.number = number self.symbol = symbol self.transformations = transformations self.transposed_rotations = N.array([N.transpose(t[0]) for t in transformations]) self.phase_factors = N.exp(N.array([(-2j*N.pi*t[1])/t[2] for t in transformations])) def __repr__(self): return "SpaceGroup(%d, %s)" % (self.number, repr(self.symbol)) def __len__(self): """ :return: the number of space group transformations :rtype: int """ return len(self.transformations) def symmetryEquivalentMillerIndices(self, hkl): """ :param hkl: a set of Miller indices :type hkl: Scientific.N.array_type :return: a tuple (miller_indices, phase_factor) of two arrays of length equal to the number of space group transformations. miller_indices contains the Miller indices of each reflection equivalent by symmetry to the reflection hkl (including hkl itself as the first element). phase_factor contains the phase factors that must be applied to the structure factor of reflection hkl to obtain the structure factor of the symmetry equivalent reflection. :rtype: tuple """ hkls = N.dot(self.transposed_rotations, hkl) p = N.multiply.reduce(self.phase_factors**hkl, -1) return hkls, p space_groups = {} transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(1, 'P 1', transformations) space_groups[1] = sg space_groups['P 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(2, 'P -1', transformations) space_groups[2] = sg space_groups['P -1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(3, 'P 1 2 1', transformations) space_groups[3] = sg space_groups['P 1 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(4, 'P 1 21 1', transformations) space_groups[4] = sg space_groups['P 1 21 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(5, 'C 1 2 1', transformations) space_groups[5] = sg space_groups['C 1 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(6, 'P 1 m 1', transformations) space_groups[6] = sg space_groups['P 1 m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(7, 'P 1 c 1', transformations) space_groups[7] = sg space_groups['P 1 c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(8, 'C 1 m 1', transformations) space_groups[8] = sg space_groups['C 1 m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(9, 'C 1 c 1', transformations) space_groups[9] = sg space_groups['C 1 c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(10, 'P 1 2/m 1', transformations) space_groups[10] = sg space_groups['P 1 2/m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(11, 'P 1 21/m 1', transformations) space_groups[11] = sg space_groups['P 1 21/m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(12, 'C 1 2/m 1', transformations) space_groups[12] = sg space_groups['C 1 2/m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(13, 'P 1 2/c 1', transformations) space_groups[13] = sg space_groups['P 1 2/c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(14, 'P 1 21/c 1', transformations) space_groups[14] = sg space_groups['P 1 21/c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(15, 'C 1 2/c 1', transformations) space_groups[15] = sg space_groups['C 1 2/c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(16, 'P 2 2 2', transformations) space_groups[16] = sg space_groups['P 2 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(17, 'P 2 2 21', transformations) space_groups[17] = sg space_groups['P 2 2 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(18, 'P 21 21 2', transformations) space_groups[18] = sg space_groups['P 21 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(19, 'P 21 21 21', transformations) space_groups[19] = sg space_groups['P 21 21 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(20, 'C 2 2 21', transformations) space_groups[20] = sg space_groups['C 2 2 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(21, 'C 2 2 2', transformations) space_groups[21] = sg space_groups['C 2 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(22, 'F 2 2 2', transformations) space_groups[22] = sg space_groups['F 2 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(23, 'I 2 2 2', transformations) space_groups[23] = sg space_groups['I 2 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(24, 'I 21 21 21', transformations) space_groups[24] = sg space_groups['I 21 21 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(25, 'P m m 2', transformations) space_groups[25] = sg space_groups['P m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(26, 'P m c 21', transformations) space_groups[26] = sg space_groups['P m c 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(27, 'P c c 2', transformations) space_groups[27] = sg space_groups['P c c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(28, 'P m a 2', transformations) space_groups[28] = sg space_groups['P m a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(29, 'P c a 21', transformations) space_groups[29] = sg space_groups['P c a 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(30, 'P n c 2', transformations) space_groups[30] = sg space_groups['P n c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(31, 'P m n 21', transformations) space_groups[31] = sg space_groups['P m n 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(32, 'P b a 2', transformations) space_groups[32] = sg space_groups['P b a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(33, 'P n a 21', transformations) space_groups[33] = sg space_groups['P n a 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(34, 'P n n 2', transformations) space_groups[34] = sg space_groups['P n n 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(35, 'C m m 2', transformations) space_groups[35] = sg space_groups['C m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(36, 'C m c 21', transformations) space_groups[36] = sg space_groups['C m c 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(37, 'C c c 2', transformations) space_groups[37] = sg space_groups['C c c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(38, 'A m m 2', transformations) space_groups[38] = sg space_groups['A m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(39, 'A b m 2', transformations) space_groups[39] = sg space_groups['A b m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(40, 'A m a 2', transformations) space_groups[40] = sg space_groups['A m a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(41, 'A b a 2', transformations) space_groups[41] = sg space_groups['A b a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(42, 'F m m 2', transformations) space_groups[42] = sg space_groups['F m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(43, 'F d d 2', transformations) space_groups[43] = sg space_groups['F d d 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(44, 'I m m 2', transformations) space_groups[44] = sg space_groups['I m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(45, 'I b a 2', transformations) space_groups[45] = sg space_groups['I b a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(46, 'I m a 2', transformations) space_groups[46] = sg space_groups['I m a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(47, 'P m m m', transformations) space_groups[47] = sg space_groups['P m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(48, 'P n n n :2', transformations) space_groups[48] = sg space_groups['P n n n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(49, 'P c c m', transformations) space_groups[49] = sg space_groups['P c c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(50, 'P b a n :2', transformations) space_groups[50] = sg space_groups['P b a n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(51, 'P m m a', transformations) space_groups[51] = sg space_groups['P m m a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(52, 'P n n a', transformations) space_groups[52] = sg space_groups['P n n a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(53, 'P m n a', transformations) space_groups[53] = sg space_groups['P m n a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(54, 'P c c a', transformations) space_groups[54] = sg space_groups['P c c a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(55, 'P b a m', transformations) space_groups[55] = sg space_groups['P b a m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(56, 'P c c n', transformations) space_groups[56] = sg space_groups['P c c n'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(57, 'P b c m', transformations) space_groups[57] = sg space_groups['P b c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(58, 'P n n m', transformations) space_groups[58] = sg space_groups['P n n m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(59, 'P m m n :2', transformations) space_groups[59] = sg space_groups['P m m n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(60, 'P b c n', transformations) space_groups[60] = sg space_groups['P b c n'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(61, 'P b c a', transformations) space_groups[61] = sg space_groups['P b c a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(62, 'P n m a', transformations) space_groups[62] = sg space_groups['P n m a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(63, 'C m c m', transformations) space_groups[63] = sg space_groups['C m c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(64, 'C m c a', transformations) space_groups[64] = sg space_groups['C m c a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(65, 'C m m m', transformations) space_groups[65] = sg space_groups['C m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(66, 'C c c m', transformations) space_groups[66] = sg space_groups['C c c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(67, 'C m m a', transformations) space_groups[67] = sg space_groups['C m m a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(68, 'C c c a :2', transformations) space_groups[68] = sg space_groups['C c c a :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(69, 'F m m m', transformations) space_groups[69] = sg space_groups['F m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,3,3]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,0,3]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(70, 'F d d d :2', transformations) space_groups[70] = sg space_groups['F d d d :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(71, 'I m m m', transformations) space_groups[71] = sg space_groups['I m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(72, 'I b a m', transformations) space_groups[72] = sg space_groups['I b a m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(73, 'I b c a', transformations) space_groups[73] = sg space_groups['I b c a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(74, 'I m m a', transformations) space_groups[74] = sg space_groups['I m m a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(75, 'P 4', transformations) space_groups[75] = sg space_groups['P 4'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(76, 'P 41', transformations) space_groups[76] = sg space_groups['P 41'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(77, 'P 42', transformations) space_groups[77] = sg space_groups['P 42'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(78, 'P 43', transformations) space_groups[78] = sg space_groups['P 43'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(79, 'I 4', transformations) space_groups[79] = sg space_groups['I 4'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(80, 'I 41', transformations) space_groups[80] = sg space_groups['I 41'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(81, 'P -4', transformations) space_groups[81] = sg space_groups['P -4'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(82, 'I -4', transformations) space_groups[82] = sg space_groups['I -4'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(83, 'P 4/m', transformations) space_groups[83] = sg space_groups['P 4/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(84, 'P 42/m', transformations) space_groups[84] = sg space_groups['P 42/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(85, 'P 4/n :2', transformations) space_groups[85] = sg space_groups['P 4/n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(86, 'P 42/n :2', transformations) space_groups[86] = sg space_groups['P 42/n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(87, 'I 4/m', transformations) space_groups[87] = sg space_groups['I 4/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-3,-3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,5,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(88, 'I 41/a :2', transformations) space_groups[88] = sg space_groups['I 41/a :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(89, 'P 4 2 2', transformations) space_groups[89] = sg space_groups['P 4 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(90, 'P 4 21 2', transformations) space_groups[90] = sg space_groups['P 4 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(91, 'P 41 2 2', transformations) space_groups[91] = sg space_groups['P 41 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(92, 'P 41 21 2', transformations) space_groups[92] = sg space_groups['P 41 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(93, 'P 42 2 2', transformations) space_groups[93] = sg space_groups['P 42 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(94, 'P 42 21 2', transformations) space_groups[94] = sg space_groups['P 42 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(95, 'P 43 2 2', transformations) space_groups[95] = sg space_groups['P 43 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(96, 'P 43 21 2', transformations) space_groups[96] = sg space_groups['P 43 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(97, 'I 4 2 2', transformations) space_groups[97] = sg space_groups['I 4 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(98, 'I 41 2 2', transformations) space_groups[98] = sg space_groups['I 41 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(99, 'P 4 m m', transformations) space_groups[99] = sg space_groups['P 4 m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(100, 'P 4 b m', transformations) space_groups[100] = sg space_groups['P 4 b m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(101, 'P 42 c m', transformations) space_groups[101] = sg space_groups['P 42 c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(102, 'P 42 n m', transformations) space_groups[102] = sg space_groups['P 42 n m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(103, 'P 4 c c', transformations) space_groups[103] = sg space_groups['P 4 c c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(104, 'P 4 n c', transformations) space_groups[104] = sg space_groups['P 4 n c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(105, 'P 42 m c', transformations) space_groups[105] = sg space_groups['P 42 m c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(106, 'P 42 b c', transformations) space_groups[106] = sg space_groups['P 42 b c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(107, 'I 4 m m', transformations) space_groups[107] = sg space_groups['I 4 m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(108, 'I 4 c m', transformations) space_groups[108] = sg space_groups['I 4 c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(109, 'I 41 m d', transformations) space_groups[109] = sg space_groups['I 41 m d'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(110, 'I 41 c d', transformations) space_groups[110] = sg space_groups['I 41 c d'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(111, 'P -4 2 m', transformations) space_groups[111] = sg space_groups['P -4 2 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(112, 'P -4 2 c', transformations) space_groups[112] = sg space_groups['P -4 2 c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(113, 'P -4 21 m', transformations) space_groups[113] = sg space_groups['P -4 21 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(114, 'P -4 21 c', transformations) space_groups[114] = sg space_groups['P -4 21 c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(115, 'P -4 m 2', transformations) space_groups[115] = sg space_groups['P -4 m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(116, 'P -4 c 2', transformations) space_groups[116] = sg space_groups['P -4 c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(117, 'P -4 b 2', transformations) space_groups[117] = sg space_groups['P -4 b 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(118, 'P -4 n 2', transformations) space_groups[118] = sg space_groups['P -4 n 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(119, 'I -4 m 2', transformations) space_groups[119] = sg space_groups['I -4 m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(120, 'I -4 c 2', transformations) space_groups[120] = sg space_groups['I -4 c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(121, 'I -4 2 m', transformations) space_groups[121] = sg space_groups['I -4 2 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(122, 'I -4 2 d', transformations) space_groups[122] = sg space_groups['I -4 2 d'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(123, 'P 4/m m m', transformations) space_groups[123] = sg space_groups['P 4/m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(124, 'P 4/m c c', transformations) space_groups[124] = sg space_groups['P 4/m c c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(125, 'P 4/n b m :2', transformations) space_groups[125] = sg space_groups['P 4/n b m :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(126, 'P 4/n n c :2', transformations) space_groups[126] = sg space_groups['P 4/n n c :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(127, 'P 4/m b m', transformations) space_groups[127] = sg space_groups['P 4/m b m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(128, 'P 4/m n c', transformations) space_groups[128] = sg space_groups['P 4/m n c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(129, 'P 4/n m m :2', transformations) space_groups[129] = sg space_groups['P 4/n m m :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(130, 'P 4/n c c :2', transformations) space_groups[130] = sg space_groups['P 4/n c c :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(131, 'P 42/m m c', transformations) space_groups[131] = sg space_groups['P 42/m m c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(132, 'P 42/m c m', transformations) space_groups[132] = sg space_groups['P 42/m c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(133, 'P 42/n b c :2', transformations) space_groups[133] = sg space_groups['P 42/n b c :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(134, 'P 42/n n m :2', transformations) space_groups[134] = sg space_groups['P 42/n n m :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(135, 'P 42/m b c', transformations) space_groups[135] = sg space_groups['P 42/m b c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(136, 'P 42/m n m', transformations) space_groups[136] = sg space_groups['P 42/m n m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(137, 'P 42/n m c :2', transformations) space_groups[137] = sg space_groups['P 42/n m c :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(138, 'P 42/n c m :2', transformations) space_groups[138] = sg space_groups['P 42/n c m :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(139, 'I 4/m m m', transformations) space_groups[139] = sg space_groups['I 4/m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(140, 'I 4/m c m', transformations) space_groups[140] = sg space_groups['I 4/m c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-3,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-3,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(141, 'I 41/a m d :2', transformations) space_groups[141] = sg space_groups['I 41/a m d :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-3,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-3,-3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,5,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,5,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,-1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(142, 'I 41/a c d :2', transformations) space_groups[142] = sg space_groups['I 41/a c d :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(143, 'P 3', transformations) space_groups[143] = sg space_groups['P 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(144, 'P 31', transformations) space_groups[144] = sg space_groups['P 31'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(145, 'P 32', transformations) space_groups[145] = sg space_groups['P 32'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(146, 'R 3 :H', transformations) space_groups[146] = sg space_groups['R 3 :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(147, 'P -3', transformations) space_groups[147] = sg space_groups['P -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(148, 'R -3 :H', transformations) space_groups[148] = sg space_groups['R -3 :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(149, 'P 3 1 2', transformations) space_groups[149] = sg space_groups['P 3 1 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(150, 'P 3 2 1', transformations) space_groups[150] = sg space_groups['P 3 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(151, 'P 31 1 2', transformations) space_groups[151] = sg space_groups['P 31 1 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(152, 'P 31 2 1', transformations) space_groups[152] = sg space_groups['P 31 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(153, 'P 32 1 2', transformations) space_groups[153] = sg space_groups['P 32 1 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(154, 'P 32 2 1', transformations) space_groups[154] = sg space_groups['P 32 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(155, 'R 3 2 :H', transformations) space_groups[155] = sg space_groups['R 3 2 :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(156, 'P 3 m 1', transformations) space_groups[156] = sg space_groups['P 3 m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(157, 'P 3 1 m', transformations) space_groups[157] = sg space_groups['P 3 1 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(158, 'P 3 c 1', transformations) space_groups[158] = sg space_groups['P 3 c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(159, 'P 3 1 c', transformations) space_groups[159] = sg space_groups['P 3 1 c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(160, 'R 3 m :H', transformations) space_groups[160] = sg space_groups['R 3 m :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(161, 'R 3 c :H', transformations) space_groups[161] = sg space_groups['R 3 c :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(162, 'P -3 1 m', transformations) space_groups[162] = sg space_groups['P -3 1 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(163, 'P -3 1 c', transformations) space_groups[163] = sg space_groups['P -3 1 c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(164, 'P -3 m 1', transformations) space_groups[164] = sg space_groups['P -3 m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(165, 'P -3 c 1', transformations) space_groups[165] = sg space_groups['P -3 c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(166, 'R -3 m :H', transformations) space_groups[166] = sg space_groups['R -3 m :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,7]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,2,2]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,2,1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,5]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([2,1,1]) trans_den = N.array([3,3,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,-1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,-1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([2,1,-1]) trans_den = N.array([3,3,6]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(167, 'R -3 c :H', transformations) space_groups[167] = sg space_groups['R -3 c :H'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(168, 'P 6', transformations) space_groups[168] = sg space_groups['P 6'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(169, 'P 61', transformations) space_groups[169] = sg space_groups['P 61'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(170, 'P 65', transformations) space_groups[170] = sg space_groups['P 65'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(171, 'P 62', transformations) space_groups[171] = sg space_groups['P 62'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(172, 'P 64', transformations) space_groups[172] = sg space_groups['P 64'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(173, 'P 63', transformations) space_groups[173] = sg space_groups['P 63'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(174, 'P -6', transformations) space_groups[174] = sg space_groups['P -6'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(175, 'P 6/m', transformations) space_groups[175] = sg space_groups['P 6/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(176, 'P 63/m', transformations) space_groups[176] = sg space_groups['P 63/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(177, 'P 6 2 2', transformations) space_groups[177] = sg space_groups['P 6 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(178, 'P 61 2 2', transformations) space_groups[178] = sg space_groups['P 61 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,5]) trans_den = N.array([1,1,6]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(179, 'P 65 2 2', transformations) space_groups[179] = sg space_groups['P 65 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(180, 'P 62 2 2', transformations) space_groups[180] = sg space_groups['P 62 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,2]) trans_den = N.array([1,1,3]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(181, 'P 64 2 2', transformations) space_groups[181] = sg space_groups['P 64 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(182, 'P 63 2 2', transformations) space_groups[182] = sg space_groups['P 63 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(183, 'P 6 m m', transformations) space_groups[183] = sg space_groups['P 6 m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(184, 'P 6 c c', transformations) space_groups[184] = sg space_groups['P 6 c c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(185, 'P 63 c m', transformations) space_groups[185] = sg space_groups['P 63 c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(186, 'P 63 m c', transformations) space_groups[186] = sg space_groups['P 63 m c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(187, 'P -6 m 2', transformations) space_groups[187] = sg space_groups['P -6 m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(188, 'P -6 c 2', transformations) space_groups[188] = sg space_groups['P -6 c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(189, 'P -6 2 m', transformations) space_groups[189] = sg space_groups['P -6 2 m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(190, 'P -6 2 c', transformations) space_groups[190] = sg space_groups['P -6 2 c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(191, 'P 6/m m m', transformations) space_groups[191] = sg space_groups['P 6/m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(192, 'P 6/m c c', transformations) space_groups[192] = sg space_groups['P 6/m c c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(193, 'P 63/m c m', transformations) space_groups[193] = sg space_groups['P 63/m c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,1,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,1,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,-1,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,-1,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(194, 'P 63/m m c', transformations) space_groups[194] = sg space_groups['P 63/m m c'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(195, 'P 2 3', transformations) space_groups[195] = sg space_groups['P 2 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(196, 'F 2 3', transformations) space_groups[196] = sg space_groups['F 2 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(197, 'I 2 3', transformations) space_groups[197] = sg space_groups['I 2 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(198, 'P 21 3', transformations) space_groups[198] = sg space_groups['P 21 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(199, 'I 21 3', transformations) space_groups[199] = sg space_groups['I 21 3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(200, 'P m -3', transformations) space_groups[200] = sg space_groups['P m -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(201, 'P n -3 :2', transformations) space_groups[201] = sg space_groups['P n -3 :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(202, 'F m -3', transformations) space_groups[202] = sg space_groups['F m -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,3,3]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,3,3]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,3,3]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,0,3]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,0,3]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,0,3]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,3,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([3,3,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(203, 'F d -3 :2', transformations) space_groups[203] = sg space_groups['F d -3 :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(204, 'I m -3', transformations) space_groups[204] = sg space_groups['I m -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(205, 'P a -3', transformations) space_groups[205] = sg space_groups['P a -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,-1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,-1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,1,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,0,0,-1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,-1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,0,0,1,1,0,0]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(206, 'I a -3', transformations) space_groups[206] = sg space_groups['I a -3'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,-1,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,0,1,0,-1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,0,1,0,-1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,-1,0,1,0,1,0,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,0,1,1,0,0,0,1,0]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot =
N.array([0,1,0,0,0,1,1,0,0])
numpy.array
import numpy as np class RecognizersRoundSignalConstants: LOWER_BLUE = np.array([100, 150, 0]) UPPER_BLUE =
np.array([140, 255, 255])
numpy.array
import argparse import random import os import numpy as np import copy import torch import utils as U from models import CompositionalBot, CompEncoder, CompDecoder, CompEncoderDecoder def main(opts): opts['cuda'] = torch.cuda.is_available() opts['device'] = torch.device('cuda' if opts['cuda'] else 'cpu') print("OPTS:\n", opts) if opts['num_compbot_samples_train'] == 0: opts['init_supervised_iters'] = 0 opts['num_supervised_iters'] = 0 random.seed(opts['seed']) np.random.seed(opts['seed']) torch.manual_seed(opts['seed']) comp_bot = CompositionalBot(opts, seed=opts['seed']) train_data, val_data, test_data = U.make_dataset(num_properties=opts['num_properties'], types_per_property=opts['types_per_property'], val_pct=opts['val_pct'], test_pct=opts['test_pct']) n_samples_train = train_data[:opts['num_compbot_samples_train']] n_samples_val = val_data[:opts['num_compbot_samples_val']] n_samples_test = test_data[:opts['num_compbot_samples_test']] train_data = train_data[opts['num_compbot_samples_train']:] val_data = val_data[opts['num_compbot_samples_val']:] test_data = test_data[opts['num_compbot_samples_test']:] train_inds = U.get_batch_indices(train_data, opts['num_properties'], opts['types_per_property'], opts['device']).permute(1, 0) val_inds = U.get_batch_indices(val_data, opts['num_properties'], opts['types_per_property'], opts['device']).permute(1, 0) test_inds = U.get_batch_indices(test_data, opts['num_properties'], opts['types_per_property'], opts['device']).permute(1, 0) n_samples_train_inds = U.get_batch_indices(n_samples_train, opts['num_properties'], opts['types_per_property'], opts['device']) n_samples_val_inds = U.get_batch_indices(n_samples_val, opts['num_properties'], opts['types_per_property'], opts['device']) n_samples_test_inds = U.get_batch_indices(n_samples_test, opts['num_properties'], opts['types_per_property'], opts['device']) train_data = torch.tensor(train_data, device=opts['device'], dtype=torch.float) val_data = torch.tensor(val_data, device=opts['device'], dtype=torch.float) test_data = torch.tensor(test_data, device=opts['device'], dtype=torch.float) n_samples_train = torch.tensor(n_samples_train, device=opts['device'], dtype=torch.float) n_samples_val = torch.tensor(n_samples_val, device=opts['device'], dtype=torch.float) n_samples_test = torch.tensor(n_samples_test, device=opts['device'], dtype=torch.float) n_samples_train_words = comp_bot.encoder(n_samples_train) n_samples_val_words = comp_bot.encoder(n_samples_val) n_samples_test_words = comp_bot.encoder(n_samples_test) n_samples_train_target = torch.argmax(n_samples_train_words.permute(1, 0, 2), dim=-1) n_samples_val_target = torch.argmax(n_samples_val_words.permute(1, 0, 2), dim=-1) n_samples_test_target = torch.argmax(n_samples_test_words.permute(1, 0, 2), dim=-1) encdec_list = [] for i in range(opts['num_encoders_train']): encdec_list.append(CompEncoderDecoder(opts).to(device=opts['device'])) enc_acc = 0 dec_acc = 0 enc_acc_val = 0 dec_acc_val = 0 for it in range(opts['init_supervised_iters']): enc_acc_list = [] dec_acc_list = [] enc_acc_list_val = [] dec_acc_list_val = [] for j in range(opts['num_encoders_train']): enc_words = encdec_list[j].enc.encode(n_samples_train) encdec_list[j].enc.update(enc_words, n_samples_train_target) dec_out = encdec_list[j].dec.decode(n_samples_train_words) encdec_list[j].dec.update(dec_out, n_samples_train_inds) eacc_val = encdec_list[j].enc.test(n_samples_val, n_samples_val_target) eacc = encdec_list[j].enc.test(n_samples_train, n_samples_train_target) dacc_val = encdec_list[j].dec.test(n_samples_val_words, n_samples_val_inds) dacc = encdec_list[j].dec.test(n_samples_train_words, n_samples_train_inds) enc_acc_list_val.append(eacc_val) dec_acc_list_val.append(dacc_val) enc_acc_list.append(eacc) dec_acc_list.append(dacc) enc_acc = np.mean(enc_acc_list) dec_acc = np.mean(dec_acc_list) enc_acc_val = np.mean(enc_acc_list_val) dec_acc_val = np.mean(dec_acc_list_val) if (enc_acc > opts['max_val_acc']) and (dec_acc > opts['max_val_acc']): break encdec_acc_list = [] for j in range(opts['num_encoders_train']): val_sample = random.sample(list(range(len(val_data))), opts['batch_size']) val_batch = val_data[val_sample] val_batch_inds = val_inds[val_sample].permute(1, 0) ed_acc = encdec_list[j].test(val_batch, val_batch_inds) encdec_acc_list.append(ed_acc) encdec_acc = np.mean(encdec_acc_list) print("\nInitial supervised stats:") print("Encoder Accuracy Train:", enc_acc, "Val:", enc_acc_val, "at", it, "iters") print("Decoder Accuracy Train:", dec_acc, "Val:", dec_acc_val, "at", it, "iters") print("EncDec Accuracy:", encdec_acc, "before self-play") print("\n Starting joint training") im_val_encdec_acc = encdec_acc enc_acc = 0 dec_acc = 0 encdec_acc = 0 for it in range(opts['num_iters']): print("\nCombined iters", it) sp_encdec_acc = 0 sp_val_encdec_acc = 0 for fi in range(opts['num_selfplay_iters']): sp_encdec_acc_list = [] val_encdec_acc_list = [] for j in range(opts['num_encoders_train']): train_sample = random.sample(list(range(len(train_data))), opts['batch_size']) train_batch = train_data[train_sample] train_batch_inds = train_inds[train_sample].permute(1, 0) encdec_list[j].update(train_batch, train_batch_inds) sp_ed_acc = encdec_list[j].test(train_batch, train_batch_inds) sp_encdec_acc_list.append(sp_ed_acc) val_sample = random.sample(list(range(len(val_data))), opts['batch_size']) val_batch = val_data[val_sample] val_batch_inds = val_inds[val_sample].permute(1, 0) ed_acc = encdec_list[j].test(val_batch, val_batch_inds) val_encdec_acc_list.append(ed_acc) sp_encdec_acc = np.mean(sp_encdec_acc_list) sp_val_encdec_acc = np.mean(val_encdec_acc_list) if sp_val_encdec_acc > opts['max_val_acc']: break enc_acc_list = [] dec_acc_list = [] enc_acc_list_val = [] dec_acc_list_val = [] for j in range(opts['num_encoders_train']): eacc_val = encdec_list[j].enc.test(n_samples_val, n_samples_val_target) eacc = encdec_list[j].enc.test(n_samples_train, n_samples_train_target) dacc_val = encdec_list[j].dec.test(n_samples_val_words, n_samples_val_inds) dacc = encdec_list[j].dec.test(n_samples_train_words, n_samples_train_inds) enc_acc_list_val.append(eacc_val) dec_acc_list_val.append(dacc_val) enc_acc_list.append(eacc) dec_acc_list.append(dacc) sp_enc_acc = np.mean(enc_acc_list) sp_dec_acc =
np.mean(dec_acc_list)
numpy.mean
# -*- mode: python; coding: utf-8 -*- # Copyright 2017-2018 <NAME> and collaborators. # Licensed under the MIT License. """Train and use artificial neural network approximations ("regressions") of synchrotron radiative transfer coefficients as a function of various physical input parameters. The meat of the neural network code is in the ``impl`` module to avoid importing Keras unless needed. """ from __future__ import absolute_import, division, print_function __all__ = ''' AbsLogMapping DirectMapping DomainRange LogMapping LogitMapping Mapping NegLogMapping NinthRootMapping SampleData SignMapping basic_load detrivialize_stokes_basis mapping_from_dict mapping_from_samples '''.split() from collections import OrderedDict from six.moves import range import numpy as np import pandas as pd from pwkit.io import Path class Mapping(object): """An abstract base class for parameter transformations. Mapping classes are used to translate the physical parameters fed into *neurosynchro* into normalized values that are easier to work with numerically. You will not normally need to use them directly. """ desc = None # set by subclasses trainer = None phys_bounds_mode = 'empirical' "Blah blah" normalization_mode = 'gaussian' out_of_sample = 'ignore' def __init__(self, name): self.name = name @classmethod def from_info_and_samples(cls, info, phys_samples): """Create a new :class:`Mapping` from a dictionary of information and a set of samples. **Call signature** *info* A dictionary of attributes, passed into :meth:`Mapping.from_dict`. *phys_samples* A 1D Numpy array of samples of this parameter, in no particular order. Return value A new instance of :class:`Mapping` (or one of its subclasses) with initialized bounds parameters. """ inst = cls.from_dict(info, load_bounds=False) valid = np.isfinite(phys_samples) & inst._is_valid(phys_samples) n_rej = phys_samples.size - valid.sum() print('%s: rejecting %d samples out of %d' % (inst.name, n_rej, phys_samples.size)) phys_samples = phys_samples[valid] if phys_samples.size < 3: raise Exception('not enough valid samples for %s' % inst.name) if inst.phys_bounds_mode == 'empirical': inst.p_min = phys_samples.min() inst.p_max = phys_samples.max() elif inst.phys_bounds_mode == 'theta': inst.p_min = 0. inst.p_max = 0.5 * np.pi else: raise ValueError('unrecognized phys_bounds_mode value %r for %s' % (inst.phys_bounds_mode, inst.name)) # Pluggable "transform" transformed = inst._to_xform(phys_samples) if inst.normalization_mode == 'gaussian': inst.x_mean = transformed.mean() inst.x_std = transformed.std() elif inst.normalization_mode == 'unit_interval': # Maps the physical values to the unit interval [0, 1]. inst.x_mean = transformed.min() inst.x_std = transformed.max() - inst.x_mean if inst.x_std == 0: inst.x_std = 1. else: raise ValueError('unrecognized normalization_mode value %r for %s' % (inst.normalization_mode, inst.name)) # Normalize normed = (transformed - inst.x_mean) / inst.x_std inst.n_min = normed.min() inst.n_max = normed.max() return inst def __repr__(self): return '<Mapping %s %s mean=%r sd=%r>' % (self.name, self.desc, self.x_mean, self.x_std) def phys_to_norm(self, phys): """Map "physical" parameters to normalized values **Argument** *phys* An array of "physical" input values (see :ref:`transformations`). **Return values** This method returns a tuple ``(normalized, oos)``. *normalized* The normalized versions of the input data. *oos* An array of booleans of the same shape as the input data. True values indicate inputs that were out of the sample that was used to define the mapping. """ # note: using prefix ~ instead of np.logical_not fails for scalars oos = np.logical_not((phys >= self.p_min) & (phys <= self.p_max)) # catches NaNs any_oos = np.any(oos) if any_oos: if self.out_of_sample == 'ignore': pass elif self.out_of_sample == 'clip': phys = np.clip(phys, self.p_min, self.p_max) elif self.out_of_sample == 'nan': phys = phys.copy() phys[oos] = np.nan else: raise Exception('unrecognized out-of-sample behavior %r' % self.out_of_sample) return (self._to_xform(phys) - self.x_mean) / self.x_std, any_oos def norm_to_phys(self, norm): """Map "normalized" parameters to "physical" values **Argument** *norm* An array of "normalized" input values (see :ref:`transformations`). **Return values** This method returns a tuple ``(phys, oos)``. *phys* The physical versions of the input data. *oos* An array of booleans of the same shape as the input data. True values indicate inputs that were out of the sample that was used to define the mapping. """ oos = np.logical_not((norm >= self.n_min) & (norm <= self.n_max)) # catches NaNs any_oos = np.any(oos) if any_oos: if self.out_of_sample == 'ignore': pass elif self.out_of_sample == 'clip': norm = np.clip(norm, self.n_min, self.n_max) elif self.out_of_sample == 'nan': norm = norm.copy() norm[oos] = np.nan else: raise Exception('unrecognized out-of-sample behavior %r' % self.out_of_sample) return self._from_xform(norm * self.x_std + self.x_mean), any_oos def to_dict(self): """Serialize this :class:`Mapping` into an ordered dictionary.""" d = OrderedDict() d['name'] = self.name d['maptype'] = self.desc if self.phys_bounds_mode is not None: d['phys_bounds_mode'] = self.phys_bounds_mode if self.normalization_mode is not None: d['normalization_mode'] = self.normalization_mode if self.trainer is not None: d['trainer'] = self.trainer if self.out_of_sample is not None: d['out_of_sample'] = self.out_of_sample d['x_mean'] = self.x_mean d['x_std'] = self.x_std d['phys_min'] = self.p_min d['phys_max'] = self.p_max d['norm_min'] = self.n_min d['norm_max'] = self.n_max return d @classmethod def from_dict(cls, info, load_bounds=True): """Deserialize an ordered dictionary into a new :class:`Mapping` instance. **Call signature** *info* A dictionary of parameters, as generated by :meth:`Mapping.to_dict`. *load_bounds* (default: :const:`True`) If true, deserialize bounds information such as the maximum and minimum observed physical values. If :const:`False`, these are left uninitialized. Return value A new :class:`Mapping` instance. """ if str(info['maptype']) != cls.desc: raise ValueError('info is for maptype %s but this class is %s' % (info['maptype'], cls.desc)) inst = cls(str(info['name'])) if 'phys_bounds_mode' in info: inst.phys_bounds_mode = info['phys_bounds_mode'] if 'normalization_mode' in info: inst.normalization_mode = info['normalization_mode'] if 'trainer' in info: inst.trainer = info['trainer'] if 'out_of_sample' in info: inst.out_of_sample = info['out_of_sample'] if load_bounds: inst.x_mean = float(info['x_mean']) inst.x_std = float(info['x_std']) inst.p_min = float(info['phys_min']) inst.p_max = float(info['phys_max']) inst.n_min = float(info['norm_min']) inst.n_max = float(info['norm_max']) return inst class AbsLogMapping(Mapping): desc = 'abs_log' def _to_xform(self, p): return np.log10(np.abs(p)) def _from_xform(self, x): return 10**x # XXX not invertible! def _is_valid(self, p): return p != 0 class DirectMapping(Mapping): desc = 'direct' def _to_xform(self, p): return p def _from_xform(self, x): return x def _is_valid(self, p): return np.ones(p.shape, dtype=np.bool) class LogMapping(Mapping): desc = 'log' def _to_xform(self, p): return np.log10(p) def _from_xform(self, x): return 10**x def _is_valid(self, p): return (p > 0) class LogitMapping(Mapping): desc = 'logit' def _to_xform(self, p): return np.log(p / (1. - p)) def _from_xform(self, x): return np.exp(x) / (np.exp(x) + 1) def _is_valid(self, p): # Infinities are hard to deal with so we don't allow p = 0 or p = 1. return (p > 0) & (p < 1) class NegLogMapping(Mapping): desc = 'neg_log' def _to_xform(self, p): return np.log10(-p) def _from_xform(self, x): return -(10**x) def _is_valid(self, p): return (p < 0) class NinthRootMapping(Mapping): desc = 'ninth_root' def _to_xform(self, p): return np.cbrt(np.cbrt(p)) def _from_xform(self, x): return x**9 def _is_valid(self, p): return
np.ones(p.shape, dtype=np.bool)
numpy.ones
import numpy as np class BoundBox: """ Adopted from https://github.com/thtrieu/darkflow/blob/master/darkflow/utils/box.py """ def __init__(self, obj_prob, probs=None, box_coord=[float() for i in range(4)]): self.x, self.y = float(box_coord[0]), float(box_coord[1]) self.w, self.h = float(box_coord[2]), float(box_coord[3]) self.c = 0. self.obj_prob = obj_prob self.class_probs = None if probs is None else np.array(probs) def get_score(self): return max(self.class_probs) def get_classindex(self): return
np.argmax(self.class_probs)
numpy.argmax
#!/usr/bin/env python3 # -*- coding: utf-8 -*- # Author: <NAME> # Date: 2021/1/31 9:47 PM """ Lightweight class to record training and dataset file info for later retrieval. Experiment ID is generated from the exp_ID_config.csv file; 1 if file not exist. Also includes data FalsePositiveCategorizer class for categorizing false negatives and false positives """ import os from datetime import date import pickle from typing import Union, Dict, Tuple, List import pandas as pd from tensorflow.keras import Sequential import numpy as np from processing.marsdataloader import MARSDataLoader, generate_all_feat_df from processing.extract_features import extract_destabilize import consts as C class Recorder(): def __init__(self, loader: MARSDataLoader, train_args: dict, seq_y: bool, verbose=True): self.loader = loader self.verbose = verbose self.train_args = train_args self.configID = self.train_args["configID"] self.exp_date = date.today().strftime("%B %d, %Y") self.using_seq_label = seq_y # get unique experiment ID for current project folder self.exp_ID = int(_find_next_exp_ID()) # unique experiment folder path # i.e. fill in exp{}_{}win_{}ahead_conf{}_{} self.exp_dir = C.EXP_FORMAT.format(self.exp_ID, self.train_args["window"], self.train_args["ahead"], self.train_args["configID"], self.train_args["model"]) # get prediction path self.pred_path = C.PRED_PATH.format(self.exp_ID, self.train_args["window"], self.train_args["ahead"], self.train_args["configID"], self.train_args["model"]) self.model_path = os.path.join(self.exp_dir, C.MODEL_PATH) # path to model self.recorder_path = os.path.join(self.exp_dir, C.REC_BASENAME) self.norm_stats_path = os.path.join(self.exp_dir, C.NORM_STATS_PATH) # to be recorded on record_experiment self.history: dict = {} # hisotry dict from keras history object, if any passed self.time_taken: str = "" # string of time taken in this experiment self.average_epochs: float = 0 self.std_epochs: float = 0 self.best_split: int = -1 # index of the best performing split, 0-based if self.verbose: print("Now recording experiment #{}".format(self.exp_ID)) def record_experiment(self, test_results: dict, time_taken: str, epoch_list: list, best_split: int, model: Sequential = None, norm_stats: dict = None, train_history: list = None, save_model: bool = False): """record experiment configuration and statistics""" # link references if train_history: self.history = train_history self.average_epochs = float(np.mean(epoch_list)) self.std_epochs = float(
np.std(epoch_list)
numpy.std
#!/usr/bin/env python # -*- coding: utf-8 -*- # Software License Agreement (BSD License) # # Copyright (c) 2014, Ocean Systems Laboratory, Heriot-Watt University, UK. # All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions # are met: # # * Redistributions of source code must retain the above copyright # notice, this list of conditions and the following disclaimer. # * Redistributions in binary form must reproduce the above # copyright notice, this list of conditions and the following # disclaimer in the documentation and/or other materials provided # with the distribution. # * Neither the name of the Heriot-Watt University nor the names of # its contributors may be used to endorse or promote products # derived from this software without specific prior written # permission. # # THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS # "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT # LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS # FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE # COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, # INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, # BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; # LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER # CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT # LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN # ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE # POSSIBILITY OF SUCH DAMAGE. # # Original authors: # <NAME>, <NAME>, <NAME>, <NAME> """This node wraps the NavigationSimulator providing a ROS interface that publish the navigation messages at a given rate. It consumes a force input in body-frame coordinates and updates the position of the vehicle in the simulated environment. The input forces can be generated using the thrusters_simulator provided in the vehicle_core package. This two aspects have been separated during the implementation of the nav_sim node to reduce coupling and allow the implementation of a real thruster simulator using the thruster model developed during experiments conducted in the OSL tank. """ from __future__ import division import traceback import numpy as np np.set_printoptions(precision=3, suppress=True) import rospy import roslib roslib.load_manifest('vehicle_core') import tf import tf.transformations as tft from vehicle_core.sim import navigation as sim from vehicle_core.util import conversions as cnv from nav_msgs.msg import Odometry from auv_msgs.msg import NavSts from std_srvs.srv import Empty, EmptyResponse from vehicle_interface.msg import FloatArrayStamped, Vector6Stamped from vehicle_interface.srv import Vector6Service, Vector6ServiceResponse # params RATE_SIM = 20 # simulation rate (Hz) (this is limited by the current implementation) RATE_PUB = 10 # publisher rate (Hz) (one should publish messages at a slower rate) TOPIC_NAV = 'nav/nav_sts' TOPIC_THR = 'thrusters/commands' TOPIC_FRC = 'forces/sim/body' TOPIC_NET = 'forces/sim/net' TOPIC_WATER = 'nav/sim/water' TOPIC_CURRENTS = 'nav/sim/currents' SRV_RESET = 'nav/reset' SRV_OFFSET = 'nav/offset' TOPIC_ODM = 'nav/odometry' FRAME_PARENT = 'world' FRAME_ODOM = 'odom' FRAME_CHILD = 'base_link' class NodeSimulator(object): """NavigationSimulator is part of the vehicle_core module. it provides interfacing with the ROS system. This class handles force inputs and publish navigation messages simulating the behaviour of the navigation modules running inside the vehicle during real operations. It also offers extra topics useful for monitoring the vehicle during simulation, like the total net force acting on the vehicle or the status of the internal navigation simulator. References: [1] http://www.ros.org/reps/rep-0103.html """ def __init__(self, name, sim_rate, pub_rate, **kwargs): self.name = name self.verbose = kwargs.get('verbose', False) # state self.dt = 1.0 / sim_rate self.tau =
np.zeros(6, dtype=np.float64)
numpy.zeros
# Modified based on: https://github.com/harryhan618/SCNN_Pytorch import json import os import cv2 import numpy as np import torch from torch.utils.data import Dataset class TuSimple(Dataset): """ image_set is splitted into three partitions: train, val, test. train includes label_data_0313.json, label_data_0601.json val includes label_data_0531.json test includes test_label.json """ TRAIN_SET = ['label_data_0313.json', 'label_data_0601.json'] VAL_SET = ['label_data_0531.json'] TEST_SET = ['test_label.json'] def __init__(self, path, image_set, transforms=None): super(TuSimple, self).__init__() assert image_set in ('train', 'val', 'test'), "image_set is not valid!" self.data_dir_path = path self.image_set = image_set self.transforms = transforms if not os.path.exists(os.path.join(path, "seg_label")): print("Label is going to get generated into dir: {} ...".format(os.path.join(path, "seg_label"))) self.generate_label() self.createIndex() def createIndex(self): self.img_list = [] self.segLabel_list = [] self.exist_list = [] listfile = os.path.join(self.data_dir_path, "seg_label", "list", "{}_gt.txt".format(self.image_set)) if not os.path.exists(listfile): raise FileNotFoundError("List file doesn't exist. Label has to be generated! ...") with open(listfile) as f: for line in f: line = line.strip() l = line.split(" ") self.img_list.append(os.path.join(self.data_dir_path, l[0][1:])) # l[0][1:] get rid of the first '/' so as for os.path.join self.segLabel_list.append(os.path.join(self.data_dir_path, l[1][1:])) self.exist_list.append([int(x) for x in l[2:]]) def __getitem__(self, idx): img = cv2.imread(self.img_list[idx]) img = cv2.cvtColor(img, cv2.COLOR_BGR2RGB) if self.image_set != 'test': segLabel = cv2.imread(self.segLabel_list[idx])[:, :, 0] exist = np.array(self.exist_list[idx]) else: segLabel = None exist = None sample = {'img': img, 'segLabel': segLabel, 'exist': exist, 'img_name': self.img_list[idx]} if self.transforms is not None: sample = self.transforms(sample) return sample def __len__(self): return len(self.img_list) def generate_label(self): save_dir = os.path.join(self.data_dir_path, "seg_label") os.makedirs(save_dir, exist_ok=True) # --------- merge json into one file --------- with open(os.path.join(save_dir, "train.json"), "w") as outfile: for json_name in self.TRAIN_SET: with open(os.path.join(self.data_dir_path, json_name)) as infile: for line in infile: outfile.write(line) with open(os.path.join(save_dir, "val.json"), "w") as outfile: for json_name in self.VAL_SET: with open(os.path.join(self.data_dir_path, json_name)) as infile: for line in infile: outfile.write(line) with open(os.path.join(save_dir, "test.json"), "w") as outfile: for json_name in self.TEST_SET: with open(os.path.join(self.data_dir_path, json_name)) as infile: for line in infile: outfile.write(line) self._gen_label_for_json('train') print("train set is done") self._gen_label_for_json('val') print("val set is done") self._gen_label_for_json('test') print("test set is done") def _gen_label_for_json(self, image_set): H, W = 720, 1280 SEG_WIDTH = 30 save_dir = "seg_label" os.makedirs(os.path.join(self.data_dir_path, save_dir, "list"), exist_ok=True) list_f = open(os.path.join(self.data_dir_path, save_dir, "list", "{}_gt.txt".format(image_set)), "w") json_path = os.path.join(self.data_dir_path, save_dir, "{}.json".format(image_set)) with open(json_path) as f: for line in f: label = json.loads(line) # ---------- clean and sort lanes ------------- lanes = [] _lanes = [] slope = [] # identify 1st, 2nd, 3rd, 4th lane through slope for i in range(len(label['lanes'])): l = [(x, y) for x, y in zip(label['lanes'][i], label['h_samples']) if x >= 0] if (len(l)>1): _lanes.append(l) slope.append(
np.arctan2(l[-1][1]-l[0][1], l[0][0]-l[-1][0])
numpy.arctan2
import numpy as np from scipy.stats import scoreatpercentile from sklearn.metrics import precision_score from sklearn.preprocessing import StandardScaler from sklearn.metrics import roc_auc_score def get_precn(y, y_pred): ''' Utlity function to calculate precision@n :param y: ground truth :param y_pred: number of outliers :return: score ''' # calculate the percentage of outliers out_perc = np.count_nonzero(y) / len(y) threshold = scoreatpercentile(y_pred, 100 * (1 - out_perc)) y_pred = (y_pred > threshold).astype('int') return precision_score(y, y_pred) def precision_n(y_pred, y, n): ''' Utlity function to calculate precision@n :param y_pred: predicted value :param y: ground truth :param n: number of outliers :return: scaler score ''' y_pred = np.asarray(y_pred) y = np.asarray(y) length = y.shape[0] assert (y_pred.shape == y.shape) y_sorted = np.partition(y_pred, int(length - n)) threshold = y_sorted[int(length - n)] y_n = np.greater_equal(y_pred, threshold).astype(int) # print(threshold, y_n, precision_score(y, y_n)) return precision_score(y, y_n) def get_top_n(roc_list, n, top=True): ''' for use of Accurate Selection only :param roc_list: a li :param n: :param top: :return: ''' roc_list =
np.asarray(roc_list)
numpy.asarray
import functools import h5py import os import shutil import pickle import matplotlib.pyplot as plt import numpy as np from PIL import Image def load_image(file_name: str): img = Image.open(file_name) img.load() data = np.asarray(img, dtype="uint8") return data def load_images(file_names: list): return [load_image(file_name) for file_name in file_names] def save_image(np_data, out_file_name): img = Image.fromarray(np.asarray(np.clip(np_data, 0, 255), dtype="uint8"), "L") img.save(out_file_name) def img_show(img, normalize=False): if normalize: img_max, img_min = np.max(img), np.min(img) img = 255.0 * (img - img_min) / (img_max - img_min) plt.imshow(img.astype('uint8')) plt.gca().axis('off') def save_to_hdf5(images, labels, out_path, out_name): """ Stores an array of images to HDF5. Parameters: --------------- images images array, (N, 32, 32, 3) to be stored labels labels array, (N, 1) to be stored """ if labels is None: x_set_name = "images_unlabeled" else: x_set_name = "images_labeled" with h5py.File(os.path.join(out_path, out_name + '.h5'), "w") as file: x_set = file.create_dataset( x_set_name, np.shape(images), h5py.h5t.STD_U8BE, data=images ) if labels is not None: y_set = file.create_dataset( "labels", np.shape(labels), h5py.h5t.STD_U8BE, data=labels ) def unpickle(file): with open(file, "rb") as fo: dict_ = pickle.load(fo, encoding="bytes") return dict_ def full_indices(indices, full_length=6): res = [] for index in indices: index_str = str(index) res.append('0' * (full_length - len(index_str)) + index_str + ".jpg") return res def move_images_decorator(func): @functools.wraps(func) def wrapper(*args, **kwargs): paths = func(*args, **kwargs) dir_name = os.path.join(os.getcwd(), "labeled_images_names") if os.path.exists(dir_name) is False: os.mkdir(dir_name) with open(os.path.join(dir_name, "names.txt"), "w") as f: for path in paths: f.write(path + "\n") return wrapper @move_images_decorator def move_n_images(dir_path, dest_dir_path, n_all=4000, n_move=500, shuffle=True): """ Moves n_move images from source directory to dest directory Example of usage: move_500_random("/path/to/source/dir/", "/path/to/dest/dir") return: list of indices of moved images """ indices = np.arange(n_all) if shuffle: np.random.shuffle(indices) indices = indices[:n_move] indices =
np.sort(indices)
numpy.sort
import numpy as np import pytest from scipy.sparse.linalg import lsqr import krylov from .helpers import assert_consistent from .linear_problems import ( complex_shape, complex_unsymmetric, hermitian_indefinite, hpd, real_shape, real_unsymmetric, spd_dense, spd_sparse, symmetric_indefinite, ) @pytest.mark.parametrize( "A_b", [ spd_dense((5,)), spd_sparse((5,)), spd_sparse((5, 1)), # spd_sparse((5, 3)), # # spd_rhs_0((5,)), # # spd_rhs_0sol0(), hpd(), symmetric_indefinite(), hermitian_indefinite(), real_unsymmetric(), complex_unsymmetric(), real_shape(3, 2), complex_shape(3, 2), ], ) def test_cgls(A_b): A, b = A_b # compute reference solution ref, *_ = lsqr(A, b) callback_counter = 0 def callback(*_): nonlocal callback_counter callback_counter += 1 sol, info = krylov.cgls(A, b, tol=1.0e-7, callback=callback) assert sol is not None assert callback_counter == info.numsteps + 1 assert info.success assert_consistent(A, b, info, sol, 1.0e-7) assert np.all(np.abs(sol - ref) < 1.0e7 * np.abs(ref)) def test_nonzero_x0(): A, b = complex_unsymmetric() x0 =
np.arange(1, A.shape[1] + 1)
numpy.arange
""" Slightly altered test functions from test_coco.py """ import json import numpy as np import os from detectron2.structures import BoxMode def make_mask(): """ Makes a donut shaped binary mask. """ W = 512 H = 433 mask =
np.zeros([H, W], dtype=np.uint8)
numpy.zeros
import numpy as np __all__ = [ 'random', 'inf_random', 'random_seq', 'seq', 'inf_random_seq' ] def random(n_samples, batch_size=128, n_batches=None, replace=True, priors=None): if n_batches is None: n_batches = n_samples // batch_size for i in range(n_batches): yield np.random.choice(n_samples, size=batch_size, replace=replace, p=priors) def inf_random(n_samples, batch_size=128, replace=True, priors=None): while True: yield np.random.choice(n_samples, size=batch_size, replace=replace, p=priors) def seq(n_samples, batch_size=128): indx = np.arange(n_samples) n_batches = n_samples // batch_size + (1 if n_samples % batch_size != 0 else 0) for i in range(n_batches): i_from = i * batch_size i_to = i_from + batch_size yield indx[i_from:i_to] def random_seq(n_samples, batch_size=128, allow_smaller=False): indx =
np.random.permutation(n_samples)
numpy.random.permutation
# PLUG-FLOW REACTOR MODEL # ------------------------- # import packages/modules import math as MATH import numpy as np from scipy.integrate import solve_ivp # internal from PyREMOT.docs.rmtUtility import rmtUtilityClass as rmtUtil from PyREMOT.docs.rmtThermo import * from PyREMOT.docs.rmtReaction import reactionRateExe, componentFormationRate # library from PyREMOT.library.plot import plotClass as pltc # data from PyREMOT.data.inputDataReactor import * # core from PyREMOT.core.errors import errGeneralClass as errGeneral from PyREMOT.core import constants as CONST from PyREMOT.core.utilities import roundNum from PyREMOT.core.config import REACTION_RATE_ACCURACY class PlugFlowReactorClass: # def main(): """ Plug-flow Reactor Model assumptions: no dispersion, radial gradient in temperature, velocity, concentration, and reaction rate species concentration and temperature vary with position along the reactor length class initialization: model input internal data (thermodynamic database) reaction list sorted (reactant/product of each reaction) reaction stoichiometric coefficient list """ # internal data _internalData = [] def __init__(self, modelInput, internalData, reactionListSorted, reactionStochCoeffList): self.modelInput = modelInput self.internalData = internalData self.reactionListSorted = reactionListSorted self.reactionStochCoeffList = reactionStochCoeffList @property def internalData(cls): return cls._internalData @internalData.setter def internalData(cls, value): cls._internalData.clear() cls._internalData.extend(value) def runM1(self): """ M1 modeling case """ # operating conditions P = self.modelInput['operating-conditions']['pressure'] T = self.modelInput['operating-conditions']['temperature'] # reaction list reactionDict = self.modelInput['reactions'] reactionList = rmtUtil.buildReactionList(reactionDict) # component list compList = self.modelInput['feed']['components']['shell'] # graph label setting labelList = compList.copy() labelList.append("Temperature") # component no compNo = len(compList) indexTemp = compNo # mole fraction MoFri = np.array(self.modelInput['feed']['mole-fraction']) # flowrate [mol/s] MoFlRa = self.modelInput['feed']['molar-flowrate'] # component flowrate [mol/s] MoFlRai = MoFlRa*MoFri # component molecular weight [g/mol] MoWei = rmtUtil.extractCompData(self.internalData, "MW") # gas mixture viscosity [Pa.s] GaMiVi = self.modelInput['feed']['mixture-viscosity'] # reaction rate expression reactionRateExpr = self.modelInput['reaction-rates'] # reactor spec ReSpec = self.modelInput['reactor'] # reactor inner diameter [m] ReInDi = ReSpec['ReInDi'] # reactor length [m] ReLe = ReSpec['ReLe'] # cross-sectional area [m^2] CrSeAr = CONST.PI_CONST*(ReInDi ** 2)/4 # external heat ExHe = self.modelInput['external-heat'] # cooling temperature [K] Tm = ExHe['MeTe'] # overall heat transfer coefficient [J/s.m2.K] U = ExHe['OvHeTrCo'] # heat transfer area over volume [m2/m3] a = 4/ReInDi # ExHe['EfHeTrAr'] # var no (Fi,T) varNo = compNo + 1 # initial values IV = np.zeros(varNo) IV[0:compNo] = MoFlRai IV[compNo] = T print(f"IV: {IV}") # parameters # component data reactionListSorted = self.reactionListSorted # reaction coefficient reactionStochCoeff = self.reactionStochCoeffList # standard heat of reaction at 25C [kJ/kmol] StHeRe25 = np.array( list(map(calStandardEnthalpyOfReaction, reactionList))) # fun parameters FunParam = { "compList": compList, "const": { "CrSeAr": CrSeAr, "MoWei": MoWei, "StHeRe25": StHeRe25, "GaMiVi": GaMiVi }, "ReSpec": ReSpec, "ExHe": { "OvHeTrCo": U, "EfHeTrAr": a, "MeTe": Tm }, "reactionRateExpr": reactionRateExpr, "constBC1": { "MoFri0": MoFri, "MoFlRa0": MoFlRa, "P0": P, "T0": T } } P, compList, StHeRe25, reactionListSorted, reactionStochCoeff, ExHe, CrSeAr # time span # t = (0.0, rea_L) t = np.array([0, ReLe]) t_span =
np.array([0, ReLe])
numpy.array
import simulation.quadrotor3 as quad import simulation.config as cfg import numpy as np import random from math import pi, sin, cos, exp import gym from gym import error, spaces, utils from gym.utils import seeding import simulation.animation_gl as ani_gl class PerchMTEnv(gym.Env): """ Environment wrapper for training low-level flying skills. In this environment, the aircraft is meant to perch on any of the four walls at a 90 degree angle """ def __init__(self): metadata = {'render.modes': ['human']} self.r_max = 2.5 self.goal_thresh = 0.2 self.t = 0 self.T = 10 self.action_space = np.zeros((4,)) self.observation_space = np.zeros((34,)) #Dictionary to hold the wall data self.wall_data = {"wall_plane":None,"PR":None,"ELA":None,"wall_pos":None} wall_goal = self.get_wall_goal() self.wall =wall_goal[0] self.goal_xyz = wall_goal[1] zeta_goal = self.get_goal_zeta() self.goal_zeta_sin = np.sin(zeta_goal) self.goal_zeta_cos = np.cos(zeta_goal) self.goal_uvw = np.array([[0.], [0.], [0.]]) self.goal_pqr = np.array([[0.], [0.], [0.]]) # simulation parameters self.params = cfg.params self.iris = quad.Quadrotor(self.params) self.sim_dt = self.params["dt"] self.ctrl_dt = 0.05 self.steps = range(int(self.ctrl_dt/self.sim_dt)) self.action_bound = [0, self.iris.max_rpm] self.H = int(self.T/self.ctrl_dt) self.hov_rpm = self.iris.hov_rpm self.trim = [self.hov_rpm, self.hov_rpm,self.hov_rpm, self.hov_rpm] self.trim_np = np.array(self.trim) self.bandwidth = 35. xyz, zeta, uvw, pqr = self.iris.get_state() self.vec_xyz = xyz-self.goal_xyz self.vec_zeta_sin = np.sin(zeta)-self.goal_zeta_sin self.vec_zeta_cos = np.cos(zeta)-self.goal_zeta_cos self.vec_uvw = uvw-self.goal_uvw self.vec_pqr = pqr-self.goal_pqr self.vel_r = pqr[2][0] exp_wall_approach_angle = self.wall_data["ELA"] if self.wall_data["PR"] == "R": self.wall_approach_angle = abs(exp_wall_approach_angle - zeta[0][0])+ abs(0 - zeta[1][0]) self.approach_line = ((self.goal_xyz[0][0]-xyz[0][0])**2+(self.goal_xyz[2][0]-xyz[2][0])**2)**0.5 else: self.wall_approach_angle = abs(exp_wall_approach_angle - zeta[1][0]) + abs(0 - zeta[0][0]) self.approach_line = ((self.goal_xyz[1][0]-xyz[1][0])**2+(self.goal_xyz[2][0]-xyz[2][0])**2)**0.5 self.dist_norm = np.linalg.norm(self.vec_xyz) self.att_norm_sin = np.linalg.norm(self.vec_zeta_sin) self.att_norm_cos = np.linalg.norm(self.vec_zeta_cos) self.vel_norm = np.linalg.norm(self.vec_uvw) self.ang_norm = np.linalg.norm(self.vec_pqr) self.init_rendering = False def get_goal(self): return self.goal_xyz def get_wall_goal(self): """ sets a wall in either 4 corners of of the world The goal is anywehere on this wall, the location of the wall and goal is randomly generated per reset - Landing is more consistent if the landing pad is not randomly located on each of the walls. Only randomness would be the wall. - PR = pitch or roll, needs to be controlled - ELA = expected landing angle, ie -90 or +90 - wall pos = is the location of the wall - wall plane = X or Y axis contains the wall """ size = 6 if random.randint(0,1): x = -3 if random.randint(0,1): y = -3 self.wall_data["ELA"] = np.pi/2 self.wall_data["wall_pos"] = y else: y = 3 self.wall_data["ELA"] = -np.pi/2 self.wall_data["wall_pos"] = y g_x = 0#random.randint(-5,5)/10. #Comment this out for more consistency g_z = 2.5 goal =
np.array([[g_x],[y],[g_z]])
numpy.array
# (c) 2021 <NAME> from __future__ import annotations import jax import jax.numpy as jnp import numpy as np import time import typing if typing.TYPE_CHECKING: from myriad.neural_ode.create_node import NeuralODE from myriad.config import HParams, Config from jax import jit, lax, vmap from typing import Callable, Optional, Tuple, Dict from myriad.config import Config, HParams, IntegrationMethod, SamplingApproach from myriad.systems import FiniteHorizonControlSystem from myriad.custom_types import Control, Controls, Dataset, DState, State, States, Cost, Timestep def integrate( dynamics_t: Callable[[State, Control, Timestep], DState], # dynamics function x_0: State, # starting state interval_us: Controls, # controls h: float, # step size N: int, # steps ts: jnp.ndarray, # times integration_method: IntegrationMethod # allows user to choose interpolation for controls ) -> Tuple[State, States]: # QUESTION: do we want to keep this interpolation for rk4, or move to linear? @jit def rk4_step(x, u1, u2, u3, t): k1 = dynamics_t(x, u1, t) k2 = dynamics_t(x + h * k1 / 2, u2, t + h / 2) k3 = dynamics_t(x + h * k2 / 2, u2, t + h / 2) k4 = dynamics_t(x + h * k3, u3, t + h) return x + h / 6 * (k1 + 2 * k2 + 2 * k3 + k4) @jit def heun_step(x, u1, u2, t): k1 = dynamics_t(x, u1, t) k2 = dynamics_t(x + h * k1, u2, t + h) return x + h / 2 * (k1 + k2) @jit def midpoint_step(x, u1, u2, t): x_mid = x + h * dynamics_t(x, u1, t) u_mid = (u1 + u2) / 2 return x + h * dynamics_t(x_mid, u_mid, t + h / 2) @jit def euler_step(x, u, t): return x + h * dynamics_t(x, u, t) def fn(carried_state, idx): if integration_method == IntegrationMethod.EULER: one_step_forward = euler_step(carried_state, interval_us[idx], ts[idx]) elif integration_method == IntegrationMethod.HEUN: one_step_forward = heun_step(carried_state, interval_us[idx], interval_us[idx + 1], ts[idx]) elif integration_method == IntegrationMethod.MIDPOINT: one_step_forward = midpoint_step(carried_state, interval_us[idx], interval_us[idx + 1], ts[idx]) elif integration_method == IntegrationMethod.RK4: one_step_forward = rk4_step(carried_state, interval_us[2 * idx], interval_us[2 * idx + 1], interval_us[2 * idx + 2], ts[idx]) else: print("Please choose an integration order among: {CONSTANT, LINEAR, QUADRATIC}") raise KeyError return one_step_forward, one_step_forward # (carry, y) x_T, all_next_states = lax.scan(fn, x_0, jnp.arange(N)) return x_T, jnp.concatenate((x_0[jnp.newaxis], all_next_states)) # Used for the augmented state cost calculation integrate_in_parallel = vmap(integrate, in_axes=(None, 0, 0, None, None, 0, None)) # , static_argnums=(0, 5, 6) def integrate_time_independent( dynamics_t: Callable[[State, Control], DState], # dynamics function x_0: State, # starting state interval_us: Controls, # controls h: float, # step size N: int, # steps integration_method: IntegrationMethod # allows user to choose int method ) -> Tuple[State, States]: # QUESTION: do we want to keep the mid-controls as decision variables for RK4, # or move to simply taking the average between the edge ones? @jit def rk4_step(x, u1, u2, u3): k1 = dynamics_t(x, u1) k2 = dynamics_t(x + h * k1 / 2, u2) k3 = dynamics_t(x + h * k2 / 2, u2) k4 = dynamics_t(x + h * k3, u3) return x + h / 6 * (k1 + 2 * k2 + 2 * k3 + k4) @jit def heun_step(x, u1, u2): k1 = dynamics_t(x, u1) k2 = dynamics_t(x + h * k1, u2) return x + h / 2 * (k1 + k2) @jit def midpoint_step(x, u1, u2): x_mid = x + h * dynamics_t(x, u1) u_mid = (u1 + u2) / 2 return x + h * dynamics_t(x_mid, u_mid) @jit def euler_step(x, u): return x + h * dynamics_t(x, u) def fn(carried_state, idx): if integration_method == IntegrationMethod.EULER: one_step_forward = euler_step(carried_state, interval_us[idx]) elif integration_method == IntegrationMethod.HEUN: one_step_forward = heun_step(carried_state, interval_us[idx], interval_us[idx + 1]) elif integration_method == IntegrationMethod.MIDPOINT: one_step_forward = midpoint_step(carried_state, interval_us[idx], interval_us[idx + 1]) elif integration_method == IntegrationMethod.RK4: one_step_forward = rk4_step(carried_state, interval_us[2 * idx], interval_us[2 * idx + 1], interval_us[2 * idx + 2]) else: print("Please choose an integration order among: {CONSTANT, LINEAR, QUADRATIC}") raise KeyError return one_step_forward, one_step_forward # (carry, y) x_T, all_next_states = lax.scan(fn, x_0, jnp.arange(N)) return x_T, jnp.concatenate((x_0[jnp.newaxis], all_next_states)) integrate_time_independent_in_parallel = vmap(integrate_time_independent, in_axes=(None, 0, 0, None, None, None)) # Used for the adjoint integration def integrate_fbsm( dynamics_t: Callable[[State, Control, Optional[jnp.ndarray], Optional[jnp.ndarray]], jnp.ndarray], # dynamics function x_0: jnp.ndarray, # starting state u: jnp.ndarray, # controls h: float, # step size # is negative in backward mode N: int, # steps v: Optional[jnp.ndarray] = None, t: Optional[jnp.ndarray] = None, discrete: bool = False, ) -> Tuple[jnp.ndarray, jnp.ndarray]: """ Implementation of Runge-Kutta 4th order method for ODE solving, adapted for the FBSM method. Specifically, it can either performs a numerical integration in a forward sweep over the states variables, or a backward sweep to integrate over the adjoint variables. Args: dynamics_t: (Callable) -- The dynamics (ODEs) to integrate x_0: The initial value to begin integration u: (jnp.ndarray) -- A guess over a costate variable. h: (float) -- The step size for the numerical integration N: (int) -- The number of steps for the numerical integration v: (jnp.ndarray, optional) -- Another costate variable, if needed t: (jnp.ndarray, optional) -- The time variable, for time-dependent dynamics discrete: (bool, optional) -- Perform direct calculation instead of integration if facing a discrete system. Returns: final_state, trajectory : Tuple[jnp.ndarray, jnp.array] -- The final value of the integrated variable and the complete trajectory """ @jit def rk4_step(x_t1, u, u_next, v, v_next, t): u_convex_approx = (u + u_next) / 2 v_convex_approx = (v + v_next) / 2 k1 = dynamics_t(x_t1, u, v, t) k2 = dynamics_t(x_t1 + h * k1 / 2, u_convex_approx, v_convex_approx, t + h / 2) k3 = dynamics_t(x_t1 + h * k2 / 2, u_convex_approx, v_convex_approx, t + h / 2) k4 = dynamics_t(x_t1 + h * k3, u_next, v_next, t + h) return x_t1 + (h / 6) * (k1 + 2 * k2 + 2 * k3 + k4) if v is None: v = jnp.empty_like(u) if t is None: t = jnp.empty_like(u) direction = int(jnp.sign(h)) if discrete: if direction >= 0: fn = lambda x_t, idx: [dynamics_t(x_t, u[idx], v[idx], t[idx])] * 2 else: fn = lambda x_t, idx: [dynamics_t(x_t, u[idx], v[idx - 1], t[idx - 1])] * 2 else: fn = lambda x_t, idx: [rk4_step(x_t, u[idx], u[idx + direction], v[idx], v[idx + direction], t[idx])] * 2 if direction >= 0: x_T, ys = lax.scan(fn, x_0, jnp.arange(N)) return x_T, jnp.concatenate((x_0[None], ys)) else: x_T, ys = lax.scan(fn, x_0, jnp.arange(N, 0, -1)) return x_T, jnp.concatenate((jnp.flipud(ys), x_0[None])) # First, get the optimal controls and resulting trajectory using the true system model. # Then, replace the model dynamics with the trained neural network, # and use that to find the "optimal" controls according to the NODE model. # Finally get the resulting true state trajectory coming from those suboptimal controls. # def plan_with_model(node: NeuralODE, regularize: bool = False) -> Controls: # apply_net = lambda x, u: node.net.apply(node.params, jnp.append(x, u)) # use nonlocal net and params # # # Replace system dynamics, but remember it to restore later # # old_dynamics = node.system.dynamics # # node.system.dynamics = apply_net # # objective = functools.partial(node.optimizer.objective, custom_dynamics=apply_net) # constraints = functools.partial(node.optimizer.constraints, custom_dynamics=apply_net) # # opt_inputs = { # 'objective': objective, # 'guess': node.optimizer.guess, # 'constraints': constraints, # 'bounds': node.optimizer.bounds, # 'unravel': node.optimizer.unravel # } # # _, u = solve(node.hp, node.cfg, opt_inputs) # # # Restore system dynamics # # node.system.dynamics = old_dynamics # # return u.squeeze() # this is necessary for later broadcasting def plan_with_node_model(node: NeuralODE) -> Tuple[States, Controls]: apply_net = lambda x, u: node.net.apply(node.params, jnp.append(x, u)) # use nonlocal net and params # Replace system dynamics, but remember it to restore later old_dynamics = node.system.dynamics node.system.dynamics = apply_net solved_results = node.optimizer.solve() # Restore system dynamics node.system.dynamics = old_dynamics return solved_results['x'], solved_results['u'] # TODO: I'm removing the squeeze on the ['u'] because it's causing problems later on # hopefully this doesn't break something else... all in the name of supporting vector controls # Find the optimal trajectory according the learned model def get_optimal_node_trajectory(node: NeuralODE) -> Tuple[States, Controls]: _, opt_u = plan_with_node_model(node) _, opt_x = integrate_time_independent(node.system.dynamics, node.system.x_0, opt_u, node.stepsize, node.num_steps, node.hp.integration_method) # assert not jnp.isnan(opt_u).all() and not jnp.isnan(opt_x).all() # NOTE: it used to return things in the opposite order! might cause bugs! return opt_x, opt_u # TODO: make the start state default to the system start state def get_state_trajectory_and_cost(hp: HParams, system: FiniteHorizonControlSystem, start_state: State, us: Controls) -> Tuple[States, Cost]: @jax.jit def augmented_dynamics(x_and_c: jnp.ndarray, u: Control, t: Timestep) -> jnp.ndarray: x, c = x_and_c[:-1], x_and_c[-1] return jnp.append(system.dynamics(x, u), system.cost(x, u, t)) num_steps = hp.intervals * hp.controls_per_interval step_size = system.T / num_steps times = jnp.linspace(0., system.T, num=num_steps + 1) starting_x_and_cost = jnp.append(start_state, 0.) # print("starting x and cost", starting_x_and_cost) # print("us", us.shape) # print("step size", step_size) # print("num steps", num_steps) # print("times", times.shape) # raise SystemExit # Integrate cost in parallel # print("entering integration") # print("the us are", us) _, state_and_cost = integrate( augmented_dynamics, starting_x_and_cost, us, step_size, num_steps, times, hp.integration_method) # print("the states and costs are", state_and_cost) # print("the states and costs are", state_and_cost.shape) # raise SystemExit states = state_and_cost[:, :-1] # print("extracted states", states.shape) last_augmented_state = state_and_cost[-1] # print("last aug state", last_augmented_state) cost = last_augmented_state[-1] # print("cost", cost) if system.terminal_cost: cost += system.terminal_cost_fn(last_augmented_state[:-1], us[-1]) # raise SystemExit return states, cost def smooth(curve: jnp.ndarray, its: int) -> jnp.ndarray: curve = np.array(curve) kernel = np.array([0.15286624, 0.22292994, 0.24840764, 0.22292994, 0.15286624]) # Gaussian blur for it in range(its): for i, row in enumerate(curve): for j, dim in enumerate(row.T): dim = np.pad(dim, (2, 2), 'edge') dim = np.convolve(dim, kernel, mode='valid') curve[i, :, j] = dim return jnp.array(curve) def get_defect(system: FiniteHorizonControlSystem, learned_xs: States) -> Optional[jnp.array]: defect = None if system.x_T is not None: defect = [] for i, s in enumerate(learned_xs[-1]): if system.x_T[i] is not None: defect.append(s - system.x_T[i]) if defect is not None: defect = jnp.array(defect) return defect def generate_dataset(hp: HParams, cfg: Config, given_us: Optional[Controls] = None) -> Dataset: system = hp.system() hp.key, subkey = jax.random.split(hp.key) # Generate |total dataset size| control trajectories total_size = hp.train_size + hp.val_size + hp.test_size # TODO: fix what happens in case of infinite bounds u_lower = system.bounds[hp.state_size:, 0] u_upper = system.bounds[hp.state_size:, 1] x_lower = system.bounds[:hp.state_size, 0] x_upper = system.bounds[:hp.state_size, 1] if jnp.isinf(u_lower).any() or jnp.isinf(u_upper).any(): raise Exception("infinite control bounds, aborting") if jnp.isinf(x_lower).any() or jnp.isinf(x_upper).any(): raise Exception("infinite state bounds, aborting") spread = (u_upper - u_lower) * hp.sample_spread ######################## # RANDOM WALK CONTROLS # ######################## if hp.sampling_approach == SamplingApproach.RANDOM_WALK: # Make all the first states all_start_us = np.random.uniform(u_lower, u_upper, (total_size, 1, hp.control_size)) all_us = all_start_us for i in range(hp.num_steps): next_us =
np.random.normal(0, spread, (total_size, 1, hp.control_size))
numpy.random.normal
# -*- coding: utf-8 -*- """ Created on Fri Aug 27 15:47:18 2021 @author: maple """ import numpy as np from skimage import measure import matplotlib.pyplot as plt import matplotlib as mpl import h5py # %% case = 1 simdata = h5py.File('../dns_input/case{}/snapshots_s{}.h5'.format(case, 3-case), 'r') # %% Load data index = 0 q = simdata['tasks/q'][index,:,:] qbar_zonal = np.average(q,axis=1) nx = 2048 x = np.linspace(-np.pi,np.pi, num=nx, endpoint=False) qbars = np.load('../dns_input/case{}/qbars.npz'.format(case)) qbar_equiv = qbars['qequiv'][0,:] - 8*x qbar = qbars['qbar'][0,:] qb = q+8*x[:,np.newaxis] #qb = np.zeros(q.shape)+8*x[:,np.newaxis] # %% Add an extra pixel to the edges qp = np.zeros([qb.shape[0]+1, qb.shape[1]+1]) qp[:nx,:nx] = qb qp[nx,:nx] = qb[0,:]+2*np.pi*8 qp[:nx,nx] = qb[:,0] qp[nx,nx] = qb[0,0]+2*np.pi*8 #plt.imshow(qp) maxqp = np.max(qp) minqp = np.min(qp) minsafe = maxqp-2*8*np.pi maxsafe = minqp+2*8*np.pi # %% levels = np.linspace(-8*np.pi, 8*np.pi, num=521, endpoint=False) levels = levels+np.mean(np.diff(levels))/2 areas = np.zeros(len(levels)) numContours = np.zeros(len(levels)) for ind in range(len(levels)): # Compute contours if levels[ind] <= minsafe: contours1 = measure.find_contours(qp, levels[ind]) contours2 = measure.find_contours(qp, levels[ind]+2*8*np.pi) for i in range(len(contours2)): contours2[i][:,0] -= nx rawcontours = contours1+contours2 elif levels[ind] >= maxsafe: contours1 = measure.find_contours(qp, levels[ind]) contours2 = measure.find_contours(qp, levels[ind]-2*8*np.pi) for i in range(len(contours2)): contours2[i][:,0] += nx rawcontours = contours1+contours2 else: rawcontours = measure.find_contours(qp, levels[ind]) rawcontours.sort(key=lambda c: c[0,1]) contours = [] next_ind = np.ones(len(rawcontours), dtype=int)*-1 added = np.zeros(len(rawcontours), dtype=bool) # Start stiching contours together for i in range(len(rawcontours)): c = rawcontours[i] for j in range(len(rawcontours)): c2 = rawcontours[j] if np.all(np.abs(np.mod(c[-1,:]-c2[0,:] + nx/2.0, nx)-nx/2.0)<1e-5): next_ind[i] = j for i in range(len(rawcontours)): c = rawcontours[i] if added[i]: continue if next_ind[i] >= 0: j = next_ind[i] while j != i and j >= 0: c2 = rawcontours[j] c = np.append(c, c2[1:,:], axis=0) added[j] = True j = next_ind[j] if j == i: c = c[:-1,:] contours.append(np.unwrap(c, axis=0, discont=nx/2.0)) added[i] = True num_encircling = 0 for i in range(len(contours)): c = contours[i] cx = c[:,0] cx[:-1] += c[1:,0] cx[-1] += c[0,0] cx = (cx * (2*np.pi/2.0/nx) - np.pi) dy = (np.mod(np.diff(c[:,1], append=c[0,1])+nx/2.0, nx)-nx/2.0) / nx * 2*np.pi areas[ind] += np.sum(cx*dy) if np.abs(c[0,1] - c[-1,1]) > nx/2.0: num_encircling += 1 print(ind, num_encircling) # %% xareas = areas / 2 / np.pi levelsbar = levels - 8*xareas uyareas = np.cumsum(levelsbar*np.gradient(xareas) - np.average(levelsbar*np.gradient(xareas))) uy = np.cumsum(qbar_equiv/nx*2*np.pi - np.average(qbar_equiv/nx*2*np.pi)) b = np.gradient(qbar_equiv) / (2*np.pi/nx) bareas =
np.gradient(levelsbar)
numpy.gradient
from typing import Any import numpy as np from anomaly.base import Predictor from scipy.signal import argrelmax, periodogram def get_largest_local_max(signal1D: np.ndarray, n_largest: int = 3, order: int = 1) -> [np.ndarray, np.ndarray]: """Return the largest local max and the associated index in a tuple. This function uses `order` points on each side to use for the comparison. """ all_local_max_indexes = argrelmax(signal1D, order=order)[0] all_local_max = np.take(signal1D, all_local_max_indexes) largest_local_max_indexes = all_local_max_indexes[all_local_max.argsort()[::-1]][:n_largest] return (
np.take(signal1D, largest_local_max_indexes)
numpy.take
#!/usr/bin/python import os, numpy as np, scipy as sp, nibabel.freesurfer as fs from sklearn.cluster import KMeans from sklearn.utils.arpack import eigsh # Set defaults: n_components_embedding = 25 comp_min = 2 comp_max = 20 subjects = [] base_dir = '/scr/liberia1/LEMON_LSD/LSD_rest_surf' output_base_dir = '/scr/liberia1' subjects = [26410] for subject in subjects: for hemi in ['lh', 'rh']: cort = np.sort(fs.io.read_label(('/scr/ilz2/LEMON_LSD/freesurfer/fsaverage5/label/%s.cortex.label' % hemi))) dataNorm = list([]) for session in ['rest1a', 'rest1b', 'rest2a', 'rest2b']: # load data dataAll = np.array(fs.mghformat.MGHImage.load( os.path.join(base_dir,'lsd_%s_%s_preprocessed_fsaverage5_%s.mgz' % (session, str(subject), hemi)) ).get_data().squeeze()) # remove noncortex: data = dataAll[cort,:] # norm and concatenate dataNorm.extend((data.transpose() - data.mean(axis=1)) / data.std(axis=1)) del data # get full ength of surface dataset for padding cluster results at end fullsize = len(dataAll) del dataAll # correlate dataCorr = np.corrcoef(np.transpose(
np.array(dataNorm)
numpy.array
""" isicarchive.imfunc This module provides image helper functions and doesn't have to be imported from outside the main package functionality (IsicApi). Functions --------- color_superpixel Paint the pixels belong to a superpixel list in a specific color column_period Guess periodicity of data (image) column display_image Display an image (in a Jupyter notebook!) image_compose Compose an image from parts image_corr Correlate pixel values across two images image_crop Crop an image according to coordinates (or superpixel index) image_dice Compute DICE coefficient of two images image_gradient Compute image gradient (and components) image_gray Generate gray-scale version of image image_mark_border Mark border pixels of image with encoded content (string, bytes) image_mark_pixel Mark pixel in image border image_mark_work Mark set of pixels (word) in image border image_mix Mix two (RGB or gray) image, with either max or blending image_overlay Mix an RGB image with a heatmap overlay (resampled) image_read_border Read encoded image border image_register Perform rigid-body alignment of images based on gradient image_resample Cheap (!) resampling of an image image_rotate Rotate an image (ndarray) lut_lookup Color lookup from a table (LUT) segmentation_outline Extract outline from a segmentation mask image superpixel_dice Compute DICE coefficient for superpixel lists superpixel_neighbors Generate neighbors lists for each superpixel in an image superpixel_outlines Extract superpixel (outline) shapes from superpixel map superpixel_values Return the values of a superpixel write_image Write an image to file or buffer (bytes) """ # specific version for file __version__ = '0.4.11' # imports (needed for majority of functions) from typing import Any, List, Optional, Tuple, Union import warnings import numpy from .vars import ISIC_DICE_SHAPE, ISIC_FUNC_PPI, ISIC_IMAGE_DISPLAY_SIZE_MAX # color superpixels in an image def color_superpixels( image:Union[numpy.ndarray, Tuple], splst:Union[list, numpy.ndarray], spmap:numpy.ndarray, color:Union[list, numpy.ndarray], alpha:Union[float, numpy.float, list, numpy.ndarray] = 1.0, almap:numpy.ndarray = None, spval:Union[float, numpy.float, list, numpy.ndarray, None] = None, copy_image:bool = False) -> numpy.ndarray: """ Paint the pixels belong to a superpixel list in a specific color. Parameters ---------- image : numpy.ndarray or 2- or 3-element Tuple with image size Image to be colored, if shape tuple, will be all 0 (black) splst : list or flat numpy.ndarray List of superpixels to color in the image spmap : numpy.ndarray Mapping array from func.superpixels_map(...) color : either a list or numpy.ndarray RGB Color code or list of codes to use to color superpixels alpha : either float or numpy.float value or None Alpha (opacity) value between 0.0 and 1.0, if None, set to 1.0 spval : optional numpy.ndarray Per-pixel opacity value (e.g. confidence, etc.) copy_image : bool Copy the input image prior to painting, default: False Returns ------- image : numpy.ndarray Image with superpixels painted """ # check inputs if isinstance(image, tuple): if len(image) == 2 and (isinstance(image[0], int) and isinstance(image[1], int)): im_shape = image image = numpy.zeros(image[0] * image[1], dtype=numpy.uint8) elif len(image) == 3 and (isinstance(image[0], int) and isinstance(image[1], int) and isinstance(image[2], int) and (image[2] == 1 or image[2] == 3)): im_shape = image image = numpy.zeros(image[0] * image[1] * image[2], dtype=numpy.uint8).reshape((image[0] * image[1], image[2])) else: raise ValueError('Invalid image shape.') copy_image = False else: im_shape = image.shape num_cols = im_shape[1] has_almap = False if not almap is None: if almap.size != (im_shape[0] * im_shape[1]): raise ValueError('Invalid alpha map.') has_almap = True am_shape = almap.shape try: almap.shape = (almap.size,) except: raise if copy_image: image = numpy.copy(image) if len(im_shape) == 3 or im_shape[1] > 3: planes = im_shape[2] if len(im_shape) == 3 else 1 else: if len(im_shape) > 1: planes = im_shape[1] else: planes = 1 image.shape = (im_shape[0] * im_shape[1], planes) has_alpha = False if planes > 3: planes = 3 has_alpha = True numsp = len(splst) if spval is None: spval = numpy.ones(numsp, dtype=numpy.float32) elif isinstance(spval, float) or isinstance(spval, numpy.float): spval = spval *
numpy.ones(numsp, dtype=numpy.float32)
numpy.ones
import numpy as np import matplotlib.pyplot as plt thetas_onno = np.load("data/AQ2934_theta_onno.npy") thetas_wp = np.load("data/AQ2934_theta_wp.npy") from wormpose.pose.eigenworms import load_eigenworms_matrix, theta_to_modes, modes_to_theta eigenworms_matrix = load_eigenworms_matrix("EigenWorms.csv") from wormpose.pose.centerline import flip_theta from wormpose.pose.distance_metrics import angle_distance def convert(theta): theta_flipped = flip_theta(theta) modes = theta_to_modes(theta, eigenworms_matrix)[:4] modes_flipped = theta_to_modes(theta_flipped, eigenworms_matrix)[:4] return (modes, modes_flipped), (theta, theta_flipped) def mode_dist(m1, m2): return
np.abs(m1 - m2)
numpy.abs
import matplotlib.pylab as plt import matplotlib from io import BytesIO, StringIO import matplotlib.pyplot as plt import mpld3 from matplotlib.pyplot import figure from matplotlib.gridspec import GridSpec from matplotlib.colors import ListedColormap from typing import List import numpy as np import math import copy from colour import Color # FSIZE_TITLE = 16 # FSIZE_LABEL = 14 # FSIZE_LABEL_S = 14 # FSIZE_LABEL_XS = 12 # FSIZE_TITLE = 16 # FSIZE_LABEL = 14 # FSIZE_LABEL_S = 14 # FSIZE_LABEL_XS = 12 # OPACITY = 0.9 FSIZE_TITLE = 18 FSIZE_LABEL = 18 FSIZE_LABEL_S = 16 FSIZE_LABEL_XS = 14 OPACITY = 0.9 class Timeseries: # declare props as object NOT class props! def __init__(self): self.label = "None" self.color = "blue" self.x = [] self.y = [] class Barseries: # declare props as object NOT class props! def __init__(self): self.label = "None" self.color = "blue" self.data = [] self.average = None class CMapMatrixElement: def __init__(self): self.i = 0 self.j = 0 self.ilabel = "" self.jlabel = "" self.val = 0 self.auxval = 0 def plot_timeseries_multi_sub2(timeseries_arrays: List[List[Timeseries]], title, xlabel, ylabel, figsize): matplotlib.style.use('default') id = 0 if not figsize: # fig = plt.figure(id, figsize=(9, 16)) fig = plt.figure(id) else: fig = plt.figure(id, figsize=figsize) n_sub = len(timeseries_arrays) for (i, timeseries_array) in enumerate(timeseries_arrays): set_plot_font() plt.subplot(n_sub * 100 + 11 + i) plt.grid() for ts in timeseries_array: x = ts.x y = ts.y plt.plot(x, y, label=ts.label, color=ts.color, linewidth=3) if n_sub == 1 or (i == (n_sub - 1)): set_disp(title[i], xlabel, ylabel[i]) else: set_disp(title[i], "", ylabel[i]) plt.legend(fontsize=FSIZE_LABEL_S) # ax.tick_params(axis = 'both', which = 'major', labelsize = FSIZE_LABEL_XS) # ax.tick_params(axis = 'both', which = 'minor', labelsize = FSIZE_LABEL_XS) fig = plt.gcf() plt.show() return fig, mpld3.fig_to_html(fig) def plot_timeseries_multi(id, timeseries_array: List[Timeseries], title, xlabel, ylabel, show=True, scale=None, figsize=None): matplotlib.style.use('default') if not figsize: # fig = plt.figure(id, figsize=(9, 16)) fig = plt.figure(id) else: fig = plt.figure(id, figsize=figsize) ax = plt.gca() ax.tick_params(axis='both', which='major', labelsize=FSIZE_LABEL_XS) ax.tick_params(axis='both', which='minor', labelsize=FSIZE_LABEL_XS) for ts in timeseries_array: x = ts.x y = ts.y plt.plot(x, y, label=ts.label, color=ts.color, linewidth=3) set_disp(title, xlabel, ylabel) plt.legend(fontsize=FSIZE_LABEL_S) # ax.tick_params(axis = 'both', which = 'major', labelsize = FSIZE_LABEL_XS) # ax.tick_params(axis = 'both', which = 'minor', labelsize = FSIZE_LABEL_XS) if not scale: pass else: ax.set_xlim(scale[0]) ax.set_ylim(scale[1]) plt.grid() fig = plt.gcf() if show: plt.show() return fig, fig def set_plot_font(size=FSIZE_LABEL_XS): plt.rc('xtick', labelsize=size) plt.rc('ytick', labelsize=size) plt.rc('legend', fontsize=size) def stem_timeseries_multi(timeseries_array: List[Timeseries], title, xlabel, ylabel, separate): matplotlib.style.use('default') fig = plt.figure() bottom = None for ts in timeseries_array: for y in ts.y: if bottom is None or y < bottom: bottom = y for ts in timeseries_array: plt.stem(ts.x, ts.y, label=ts.label, bottom=bottom) set_disp(title, xlabel, ylabel) plt.legend(fontsize=FSIZE_LABEL_S) fig = plt.gcf() plt.show() return fig, mpld3.fig_to_html(fig) def plot_timeseries_ax(timeseries: Timeseries, title, xlabel, ylabel, fig, ax, vlines): set_plot_font() ax.plot(timeseries.x, timeseries.y) # set_disp(title, xlabel, ylabel) if vlines is not None: for vline in vlines: ax.axvline(x=vline, ymin=0, ymax=1, c="coral", ls="-") set_disp_ax(ax, title, xlabel, ylabel) # plt.legend() # plt.show() return fig def plot_timeseries(id, timeseries: Timeseries, title, xlabel, ylabel, scale=None, figsize=None): if not figsize: fig = plt.figure(id) else: fig = plt.figure(id, figsize=figsize) plt.plot(timeseries.x, timeseries.y, linewidth=3) set_disp(title, xlabel, ylabel) ax = plt.gca() ax.tick_params(axis='both', which='major', labelsize=FSIZE_LABEL_XS) ax.tick_params(axis='both', which='minor', labelsize=FSIZE_LABEL_XS) if not scale: pass else: ax.set_xlim(scale[0]) ax.set_ylim(scale[1]) plt.grid() plt.legend(fontsize=FSIZE_LABEL_S) fig = plt.gcf() plt.show() return fig, mpld3.fig_to_html(fig) def save_figure(fig, file): fig.savefig(file, dpi=300) def set_disp_ax(ax, title, xlabel, ylabel): if title: ax.set_title(title, fontsize=FSIZE_TITLE) if xlabel: ax.set_xlabel(xlabel, fontsize=FSIZE_LABEL) if ylabel: ax.set_ylabel(ylabel, fontsize=FSIZE_LABEL) def set_disp(title, xlabel, ylabel): if title: plt.gca().set_title(title, fontsize=FSIZE_TITLE) if xlabel: plt.xlabel(xlabel, fontsize=FSIZE_LABEL) if ylabel: plt.ylabel(ylabel, fontsize=FSIZE_LABEL) # fig = plt.figure() # ax1 = fig.add_subplot(111) # ax1.plot(x, y1) # ax1.set_ylabel('y1') # ax2 = ax1.twinx() # ax2.plot(x, y2, 'r-') # ax2.set_ylabel('y2', color='r') # for tl in ax2.get_yticklabels(): # tl.set_color('r') # plt.savefig('images/two-scales-5.png') def plot_barchart_multi(bss: List[Barseries], xlabel, ylabel, title, xlabels, limits): return plot_barchart_multi_core(bss, xlabel, ylabel, title, xlabels, limits, None, None, True, None, 0, None)[0] # 0.155 # return plot_barchart_multi_core(bss, xlabel, ylabel, title, xlabels, top, None, None, True, -0.125, 0, None)[0] def plot_barchart_multi_dual(bss1: List[Barseries], bss2: List[Barseries], xlabel, ylabel1, ylabel2, title, xlabels, limits: List[List[int]], show): fig = plt.figure() ax1 = fig.add_subplot(111) if limits is None: limits = [None, None] fig, ax1 = plot_barchart_multi_core( bss1, xlabel, ylabel1, title, xlabels, limits[0], fig, ax1, False, -0.155, 2, "upper left") for b in bss2: b.color = "red" ax2 = ax1.twinx() fig, _ = plot_barchart_multi_core( bss2, xlabel, ylabel2, title, xlabels, limits[1], fig, ax2, True, 0.155, 2, "upper right") return fig def plot_barchart_multi_core(bss: List[Barseries], xlabel, ylabel, title, xlabels, limits: List[int], fig, ax, show, offset, bcount, legend_loc): # create plot if fig is None or ax is None: print("creating new figure") fig, ax = plt.subplots() # ax = plt.gca() ax.tick_params(axis='both', which='major', labelsize=FSIZE_LABEL_XS) ax.tick_params(axis='both', which='minor', labelsize=FSIZE_LABEL_XS) n_groups = len(bss) if bcount != 0: bar_width = 1 / (bcount + 1) else: bar_width = 1 / (n_groups+1) if offset is None: # offset = -1 / (n_groups * 2 * bar_width + 1) if n_groups == 2: offset = bar_width / 2 else: offset = -bar_width / 2 # if n_groups == 1: # bar_width = 1 opacity = OPACITY low = None high = None for i in range(n_groups): index = np.arange(len(bss[i].data)) # print(bss[i].data) low1 = min(bss[i].data) high1 = max(bss[i].data) if low is None: low = low1 high = high1 if low1 < low: low = low1 if high1 > high: high = high1 rb = plt.bar( index + offset + i * bar_width, bss[i].data, bar_width, alpha=opacity, color=bss[i].color, label=bss[i].label, zorder=3) plt.xlabel(xlabel, fontsize=FSIZE_LABEL) plt.ylabel(ylabel, fontsize=FSIZE_LABEL) plt.title(title, fontsize=FSIZE_TITLE) # plt.xlabel(xlabel) # plt.ylabel(ylabel) # plt.title(title) if n_groups == 1: plt.xticks(index, xlabels) else: plt.xticks(index + bar_width, xlabels) if not legend_loc: legend_loc = "upper left" plt.legend(loc=legend_loc, fontsize=FSIZE_LABEL_S) ax.grid(zorder=0) print("low limit: ", low) print("high limit: ", high) # plt.ylim([math.ceil(low-0.5*(high-low)), math.ceil(high+0.5*(high-low))]) # plt.ylim([math.ceil(low-0.005*(high-low)), math.ceil(high+0.005*(high-low))]) # plt.ylim([low, high]) # kscale = 0.25 kscale = 0.01 if limits is not None: low = limits[0] high = limits[1] else: high += kscale * high low -= kscale * low plt.ylim([low, high]) # set_fontsize() plt.tight_layout() if show: print("show") plt.show() return fig, ax def set_fontsize(): # SMALL_SIZE = 20 # MEDIUM_SIZE = 24 # BIGGER_SIZE = 28 # plt.rc('font', size=SMALL_SIZE) # controls default text sizes # plt.rc('axes', titlesize=SMALL_SIZE) # fontsize of the axes title # plt.rc('axes', labelsize=MEDIUM_SIZE) # fontsize of the x and y labels # plt.rc('xtick', labelsize=SMALL_SIZE) # fontsize of the tick labels # plt.rc('ytick', labelsize=SMALL_SIZE) # fontsize of the tick labels # plt.rc('legend', fontsize=SMALL_SIZE) # legend fontsize # plt.rc('figure', titlesize=BIGGER_SIZE) matplotlib.rcParams.update({'font.size': 16}) def plot_barchart(labels, values, xlabel, ylabel, title, color): fig = plt.figure() y_pos = np.arange(len(labels)) plt.bar(y_pos, values, align='center', alpha=OPACITY, color=color) plt.xticks(y_pos, labels) plt.xlabel(xlabel) plt.ylabel(ylabel) low = min(values) high = max(values) print(low) print(high) # plt.ylim([math.ceil(low-0.5*(high-low)), math.ceil(high+0.5*(high-low))]) # plt.ylim([math.ceil(low-0.005*(high-low)), math.ceil(high+0.005*(high-low))]) plt.ylim([low - 0.005*low, high + 0.005*high]) plt.title(title) fig = plt.gcf() plt.show() return fig def heatmap(data, row_labels, col_labels, ax=None, cbar_kw={}, cbarlabel="", scale=None, **kwargs): """ Create a heatmap from a numpy array and two lists of labels. Parameters ---------- data A 2D numpy array of shape (N, M). row_labels A list or array of length N with the labels for the rows. col_labels A list or array of length M with the labels for the columns. ax A `matplotlib.axes.Axes` instance to which the heatmap is plotted. If not provided, use current axes or create a new one. Optional. cbar_kw A dictionary with arguments to `matplotlib.Figure.colorbar`. Optional. cbarlabel The label for the colorbar. Optional. **kwargs All other arguments are forwarded to `imshow`. """ if not ax: ax = plt.gca() # Plot the heatmap # ax.figure.clim(0, 1) im = ax.imshow(data, **kwargs) # ax.figure.clim(0, 1) if scale is not None: for im in plt.gca().get_images(): im.set_clim(scale[0], scale[1]) # Create colorbar cbar = None if cbarlabel is not None: cbar = ax.figure.colorbar(im, ax=ax, **cbar_kw) cbar.ax.set_ylabel(cbarlabel, rotation=-90, va="bottom") # We want to show all ticks... ax.set_xticks(np.arange(data.shape[1])) ax.set_yticks(np.arange(data.shape[0])) # ... and label them with the respective list entries. ax.set_xticklabels(col_labels) ax.set_yticklabels(row_labels) # Let the horizontal axes labeling appear on top. # ax.tick_params(top=False, bottom=True, # labeltop=False, labelbottom=True) ax.tick_params(top=False, bottom=False, left=False, labeltop=False, labelbottom=True) # Rotate the tick labels and set their alignment. # plt.setp(ax.get_xticklabels(), rotation=30, ha="right", # rotation_mode="anchor") # plt.setp(ax.get_yticklabels(), rotation=30, ha="right", # rotation_mode="anchor") # Turn spines off and create white grid. for edge, spine in ax.spines.items(): spine.set_visible(False) ax.set_xticks(np.arange(data.shape[1]+1)-.5, minor=True) ax.set_yticks(
np.arange(data.shape[0]+1)
numpy.arange
# This module has been generated automatically from space group information # obtained from the Computational Crystallography Toolbox # """ Space groups This module contains a list of all the 230 space groups that can occur in a crystal. The variable space_groups contains a dictionary that maps space group numbers and space group names to the corresponding space group objects. .. moduleauthor:: <NAME> <<EMAIL>> """ #----------------------------------------------------------------------------- # Copyright (C) 2013 The Mosaic Development Team # # Distributed under the terms of the BSD License. The full license is in # the file LICENSE.txt, distributed as part of this software. #----------------------------------------------------------------------------- import numpy as N class SpaceGroup(object): """ Space group All possible space group objects are created in this module. Other modules should access these objects through the dictionary space_groups rather than create their own space group objects. """ def __init__(self, number, symbol, transformations): """ :param number: the number assigned to the space group by international convention :type number: int :param symbol: the Hermann-Mauguin space-group symbol as used in PDB and mmCIF files :type symbol: str :param transformations: a list of space group transformations, each consisting of a tuple of three integer arrays (rot, tn, td), where rot is the rotation matrix and tn/td are the numerator and denominator of the translation vector. The transformations are defined in fractional coordinates. :type transformations: list """ self.number = number self.symbol = symbol self.transformations = transformations self.transposed_rotations = N.array([N.transpose(t[0]) for t in transformations]) self.phase_factors = N.exp(N.array([(-2j*N.pi*t[1])/t[2] for t in transformations])) def __repr__(self): return "SpaceGroup(%d, %s)" % (self.number, repr(self.symbol)) def __len__(self): """ :return: the number of space group transformations :rtype: int """ return len(self.transformations) def symmetryEquivalentMillerIndices(self, hkl): """ :param hkl: a set of Miller indices :type hkl: Scientific.N.array_type :return: a tuple (miller_indices, phase_factor) of two arrays of length equal to the number of space group transformations. miller_indices contains the Miller indices of each reflection equivalent by symmetry to the reflection hkl (including hkl itself as the first element). phase_factor contains the phase factors that must be applied to the structure factor of reflection hkl to obtain the structure factor of the symmetry equivalent reflection. :rtype: tuple """ hkls = N.dot(self.transposed_rotations, hkl) p = N.multiply.reduce(self.phase_factors**hkl, -1) return hkls, p space_groups = {} transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(1, 'P 1', transformations) space_groups[1] = sg space_groups['P 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(2, 'P -1', transformations) space_groups[2] = sg space_groups['P -1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(3, 'P 1 2 1', transformations) space_groups[3] = sg space_groups['P 1 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(4, 'P 1 21 1', transformations) space_groups[4] = sg space_groups['P 1 21 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(5, 'C 1 2 1', transformations) space_groups[5] = sg space_groups['C 1 2 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(6, 'P 1 m 1', transformations) space_groups[6] = sg space_groups['P 1 m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(7, 'P 1 c 1', transformations) space_groups[7] = sg space_groups['P 1 c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(8, 'C 1 m 1', transformations) space_groups[8] = sg space_groups['C 1 m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(9, 'C 1 c 1', transformations) space_groups[9] = sg space_groups['C 1 c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(10, 'P 1 2/m 1', transformations) space_groups[10] = sg space_groups['P 1 2/m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(11, 'P 1 21/m 1', transformations) space_groups[11] = sg space_groups['P 1 21/m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(12, 'C 1 2/m 1', transformations) space_groups[12] = sg space_groups['C 1 2/m 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(13, 'P 1 2/c 1', transformations) space_groups[13] = sg space_groups['P 1 2/c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(14, 'P 1 21/c 1', transformations) space_groups[14] = sg space_groups['P 1 21/c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(15, 'C 1 2/c 1', transformations) space_groups[15] = sg space_groups['C 1 2/c 1'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(16, 'P 2 2 2', transformations) space_groups[16] = sg space_groups['P 2 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(17, 'P 2 2 21', transformations) space_groups[17] = sg space_groups['P 2 2 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(18, 'P 21 21 2', transformations) space_groups[18] = sg space_groups['P 21 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(19, 'P 21 21 21', transformations) space_groups[19] = sg space_groups['P 21 21 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(20, 'C 2 2 21', transformations) space_groups[20] = sg space_groups['C 2 2 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(21, 'C 2 2 2', transformations) space_groups[21] = sg space_groups['C 2 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(22, 'F 2 2 2', transformations) space_groups[22] = sg space_groups['F 2 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(23, 'I 2 2 2', transformations) space_groups[23] = sg space_groups['I 2 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(24, 'I 21 21 21', transformations) space_groups[24] = sg space_groups['I 21 21 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(25, 'P m m 2', transformations) space_groups[25] = sg space_groups['P m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(26, 'P m c 21', transformations) space_groups[26] = sg space_groups['P m c 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(27, 'P c c 2', transformations) space_groups[27] = sg space_groups['P c c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(28, 'P m a 2', transformations) space_groups[28] = sg space_groups['P m a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(29, 'P c a 21', transformations) space_groups[29] = sg space_groups['P c a 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(30, 'P n c 2', transformations) space_groups[30] = sg space_groups['P n c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(31, 'P m n 21', transformations) space_groups[31] = sg space_groups['P m n 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(32, 'P b a 2', transformations) space_groups[32] = sg space_groups['P b a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(33, 'P n a 21', transformations) space_groups[33] = sg space_groups['P n a 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(34, 'P n n 2', transformations) space_groups[34] = sg space_groups['P n n 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(35, 'C m m 2', transformations) space_groups[35] = sg space_groups['C m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(36, 'C m c 21', transformations) space_groups[36] = sg space_groups['C m c 21'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(37, 'C c c 2', transformations) space_groups[37] = sg space_groups['C c c 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(38, 'A m m 2', transformations) space_groups[38] = sg space_groups['A m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(39, 'A b m 2', transformations) space_groups[39] = sg space_groups['A b m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(40, 'A m a 2', transformations) space_groups[40] = sg space_groups['A m a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(41, 'A b a 2', transformations) space_groups[41] = sg space_groups['A b a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(42, 'F m m 2', transformations) space_groups[42] = sg space_groups['F m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(43, 'F d d 2', transformations) space_groups[43] = sg space_groups['F d d 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(44, 'I m m 2', transformations) space_groups[44] = sg space_groups['I m m 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(45, 'I b a 2', transformations) space_groups[45] = sg space_groups['I b a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(46, 'I m a 2', transformations) space_groups[46] = sg space_groups['I m a 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(47, 'P m m m', transformations) space_groups[47] = sg space_groups['P m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(48, 'P n n n :2', transformations) space_groups[48] = sg space_groups['P n n n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(49, 'P c c m', transformations) space_groups[49] = sg space_groups['P c c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(50, 'P b a n :2', transformations) space_groups[50] = sg space_groups['P b a n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(51, 'P m m a', transformations) space_groups[51] = sg space_groups['P m m a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(52, 'P n n a', transformations) space_groups[52] = sg space_groups['P n n a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(53, 'P m n a', transformations) space_groups[53] = sg space_groups['P m n a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(54, 'P c c a', transformations) space_groups[54] = sg space_groups['P c c a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(55, 'P b a m', transformations) space_groups[55] = sg space_groups['P b a m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(56, 'P c c n', transformations) space_groups[56] = sg space_groups['P c c n'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(57, 'P b c m', transformations) space_groups[57] = sg space_groups['P b c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(58, 'P n n m', transformations) space_groups[58] = sg space_groups['P n n m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(59, 'P m m n :2', transformations) space_groups[59] = sg space_groups['P m m n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(60, 'P b c n', transformations) space_groups[60] = sg space_groups['P b c n'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(61, 'P b c a', transformations) space_groups[61] = sg space_groups['P b c a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(62, 'P n m a', transformations) space_groups[62] = sg space_groups['P n m a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(63, 'C m c m', transformations) space_groups[63] = sg space_groups['C m c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(64, 'C m c a', transformations) space_groups[64] = sg space_groups['C m c a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(65, 'C m m m', transformations) space_groups[65] = sg space_groups['C m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(66, 'C c c m', transformations) space_groups[66] = sg space_groups['C c c m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(67, 'C m m a', transformations) space_groups[67] = sg space_groups['C m m a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(68, 'C c c a :2', transformations) space_groups[68] = sg space_groups['C c c a :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(69, 'F m m m', transformations) space_groups[69] = sg space_groups['F m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,3,3]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,0,3]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([4,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,1]) trans_den = N.array([4,4,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,3,1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([3,1,1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([2,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,-1]) trans_den = N.array([4,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([4,4,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(70, 'F d d d :2', transformations) space_groups[70] = sg space_groups['F d d d :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(71, 'I m m m', transformations) space_groups[71] = sg space_groups['I m m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(72, 'I b a m', transformations) space_groups[72] = sg space_groups['I b a m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(73, 'I b c a', transformations) space_groups[73] = sg space_groups['I b c a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(74, 'I m m a', transformations) space_groups[74] = sg space_groups['I m m a'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(75, 'P 4', transformations) space_groups[75] = sg space_groups['P 4'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(76, 'P 41', transformations) space_groups[76] = sg space_groups['P 41'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(77, 'P 42', transformations) space_groups[77] = sg space_groups['P 42'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(78, 'P 43', transformations) space_groups[78] = sg space_groups['P 43'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(79, 'I 4', transformations) space_groups[79] = sg space_groups['I 4'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(80, 'I 41', transformations) space_groups[80] = sg space_groups['I 41'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(81, 'P -4', transformations) space_groups[81] = sg space_groups['P -4'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(82, 'I -4', transformations) space_groups[82] = sg space_groups['I -4'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(83, 'P 4/m', transformations) space_groups[83] = sg space_groups['P 4/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,-1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(84, 'P 42/m', transformations) space_groups[84] = sg space_groups['P 42/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,0]) trans_den = N.array([2,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(85, 'P 4/n :2', transformations) space_groups[85] = sg space_groups['P 4/n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,-1]) trans_den = N.array([1,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,0,-1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(86, 'P 42/n :2', transformations) space_groups[86] = sg space_groups['P 42/n :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(87, 'I 4/m', transformations) space_groups[87] = sg space_groups['I 4/m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-3,-3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([-1,-1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,-1,0]) trans_den = N.array([1,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,5,5]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([3,3,3]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,-1,-1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([4,4,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,1]) trans_den = N.array([2,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(88, 'I 41/a :2', transformations) space_groups[88] = sg space_groups['I 41/a :2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(89, 'P 4 2 2', transformations) space_groups[89] = sg space_groups['P 4 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(90, 'P 4 21 2', transformations) space_groups[90] = sg space_groups['P 4 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(91, 'P 41 2 2', transformations) space_groups[91] = sg space_groups['P 41 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(92, 'P 41 21 2', transformations) space_groups[92] = sg space_groups['P 41 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(93, 'P 42 2 2', transformations) space_groups[93] = sg space_groups['P 42 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(94, 'P 42 21 2', transformations) space_groups[94] = sg space_groups['P 42 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,3]) trans_den = N.array([1,1,4]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(95, 'P 43 2 2', transformations) space_groups[95] = sg space_groups['P 43 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,3]) trans_den = N.array([2,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(96, 'P 43 21 2', transformations) space_groups[96] = sg space_groups['P 43 21 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(97, 'I 4 2 2', transformations) space_groups[97] = sg space_groups['I 4 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,0,3]) trans_den = N.array([2,1,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,5]) trans_den = N.array([1,2,4]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,-1]) rot.shape = (3, 3) trans_num = N.array([1,1,1]) trans_den = N.array([2,2,2]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(98, 'I 41 2 2', transformations) space_groups[98] = sg space_groups['I 41 2 2'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(99, 'P 4 m m', transformations) space_groups[99] = sg space_groups['P 4 m m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([1,1,0]) trans_den = N.array([2,2,1]) transformations.append((rot, trans_num, trans_den)) sg = SpaceGroup(100, 'P 4 b m', transformations) space_groups[100] = sg space_groups['P 4 b m'] = sg transformations = [] rot = N.array([1,0,0,0,1,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,0]) trans_den = N.array([1,1,1]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,-1,0,1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([0,1,0,-1,0,0,0,0,1]) rot.shape = (3, 3) trans_num = N.array([0,0,1]) trans_den = N.array([1,1,2]) transformations.append((rot, trans_num, trans_den)) rot = N.array([-1,0,0,0,-1,0,0,0,1]) rot.shape = (3, 3) trans_num =
N.array([0,0,0])
numpy.array
# Practice sites #https://www.machinelearningplus.com/python/101-numpy-exercises-python/ #http://www.cs.umd.edu/~nayeem/courses/MSML605/files/04_Lec4_List_Numpy.pdf #https://www.gormanalysis.com/blog/python-numpy-for-your-grandma/ #https://nickmccullum.com/advanced-python/numpy-indexing-assignment/ # 1. Import numpy as np and see the version # Difficulty Level: L1 # Q. Import numpy as np and print the version number. ##? 1. Import numpy as np and see the version # Difficulty Level: L1 # Q. Import numpy as np and print the version number. import numpy as np print(np.__version__) ##? 2. How to create a 1D array? # Difficulty Level: L1 # Q. Create a 1D array of numbers from 0 to 9 arr = np.arange(10) arr ##? 3. How to create a boolean array? # Difficulty Level: L1 # Q. Create a 3×3 numpy array of all True’s arr = np.full((3,3), True, dtype=bool) arr ##? 4. How to extract items that satisfy a given condition from 1D array? # Difficulty Level: L1 # Q. Extract all odd numbers from arr arr = np.array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9]) arr[arr % 2 == 1] ##? 5. How to replace items that satisfy a condition with another value in numpy array? # Difficulty Level: L1 # Q. Replace all odd numbers in arr with -1 arr = np.array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9]) arr[arr % 2 == 1] = -1 arr ##? 6. How to replace items that satisfy a condition without affecting the original array? # Difficulty Level: L2 # Q. Replace all odd numbers in arr with -1 without changing arr arr = np.array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9]) #1 np.where out = np.where(arr % 2 == 1, -1, arr) out #2 list comp out = np.array([-1 if x % 2 == 1 else x for x in arr]) out ##? 7. How to reshape an array? # Difficulty Level: L1 # Q. Convert a 1D array to a 2D array with 2 rows arr = np.arange(10) arr.reshape(2, -1) # Setting y to -1 automatically decides number of columns. # Could do the same with arr.reshape(2, 5) ##? 8. How to stack two arrays vertically? # Difficulty Level: L2 # Q. Stack arrays a and b vertically a = np.arange(10).reshape(2, -1) b = np.repeat(1, 10).reshape(2, -1) #1 np.vstack([a, b]) #2 np.concatenate([a, b], axis=0) #3 np.r_[a, b] # 9. How to stack two arrays horizontally? # Difficulty Level: L2 # Q. Stack the arrays a and b horizontally. a = np.arange(10).reshape(2, -1) b = np.repeat(1, 10).reshape(2, -1) #1 np.hstack([a, b]) #2 np.concatenate([a, b], axis=1) #3 np.c_[a, b] ##? 10. How to generate custom sequences in numpy without hardcoding? # Difficulty Level: L2 # Q. Create the following pattern without hardcoding. # Use only numpy functions and the below input array a. a = np.array([1,2,3]) np.r_[np.repeat(a,3), np.tile(a, 3)] ##? 11. How to get the common items between two python numpy arrays? # Difficulty Level: L2 # Q. Get the common items between a and b a = np.array([1,2,3,2,3,4,3,4,5,6]) b = np.array([7,2,10,2,7,4,9,4,9,8]) np.intersect1d(a, b) ##? 12. How to remove from one array those items that exist in another? # Difficulty Level: L2 # Q. From array a remove all items present in array b a = np.array([1,2,3,4,5]) b = np.array([5,6,7,8,9]) # From 'a' remove all of 'b' np.setdiff1d(a,b) ##? 13. How to get the positions where elements of two arrays match? # Difficulty Level: L2 # Q. Get the positions where elements of a and b match a = np.array([1,2,3,2,3,4,3,4,5,6]) b = np.array([7,2,10,2,7,4,9,4,9,8]) np.where(a==b) # 14. How to extract all numbers between a given range from a numpy array? # Difficulty Level: L2 # Q. Get all items between 5 and 10 from a. a = np.array([2, 6, 1, 9, 10, 3, 27]) #1 idx = np.where((a>=5) & (a<=10)) a[idx] #2 idx = np.where(np.logical_and(a >= 5, a <= 10)) a[idx] #3 a[(a >= 5) & (a <= 10)] ##? 15. How to make a python function that handles scalars to work on numpy arrays? # Difficulty Level: L2 # Q. Convert the function maxx that works on two scalars, to work on two arrays. def maxx(x:np.array, y:np.array): """Get the maximum of two items""" if x >= y: return x else: return y a = np.array([5, 7, 9, 8, 6, 4, 5]) b = np.array([6, 3, 4, 8, 9, 7, 1]) pair_max = np.vectorize(maxx, otypes=[float]) pair_max(a, b) ##? 16. How to swap two columns in a 2d numpy array? # Difficulty Level: L2 # Q. Swap columns 1 and 2 in the array arr. arr = np.arange(9).reshape(3,3) arr arr[:, [1, 0, 2]] #by putting brackets inside the column slice. You have access to column indices ##? 17. How to swap two rows in a 2d numpy array? # Difficulty Level: L2 # Q. Swap rows 1 and 2 in the array arr: arr = np.arange(9).reshape(3,3) arr arr[[0, 2, 1], :] #same goes here for the rows ##? 18. How to reverse the rows of a 2D array? # Difficulty Level: L2 # Q. Reverse the rows of a 2D array arr. # Input arr = np.arange(9).reshape(3,3) arr arr[::-1, :] #or arr[::-1] # 19. How to reverse the columns of a 2D array? # Difficulty Level: L2 # Q. Reverse the columns of a 2D array arr. # Input arr = np.arange(9).reshape(3,3) arr arr[:,::-1] ##? 20. How to create a 2D array containing random floats between 5 and 10? # Difficulty Level: L2 # Q. Create a 2D array of shape 5x3 to contain random decimal numbers between 5 and 10. arr = np.arange(9).reshape(3,3) #1 rand_arr = np.random.randint(low=5, high=10, size=(5,3)) + np.random.random((5,3)) rand_arr #2 rand_arr = np.random.uniform(5, 10, size=(5,3)) rand_arr ##? 21. How to print only 3 decimal places in python numpy array? # Difficulty Level: L1 # Q. Print or show only 3 decimal places of the numpy array rand_arr. rand_arr = np.random.random((5,3)) rand_arr rand_arr = np.random.random([5,3]) np.set_printoptions(precision=3) rand_arr[:4] ##? 22. How to pretty print a numpy array by suppressing the scientific notation (like 1e10)? # Difficulty Level: L1 # Q. Pretty print rand_arr by suppressing the scientific notation (like 1e10) #Reset printoptions np.set_printoptions(suppress=False) # Create the random array np.random.seed(100) rand_arr = np.random.random([3,3])/1e3 rand_arr #Set precision and suppress e notation np.set_printoptions(suppress=True, precision=6) rand_arr ##? 23. How to limit the number of items printed in output of numpy array? # Difficulty Level: L1 # Q. Limit the number of items printed in python numpy array a to a maximum of 6 elements. a = np.arange(15) #set the elements to print in threshold
np.set_printoptions(threshold=6)
numpy.set_printoptions
import xarray as xr import numpy as np import datetime import healpy as hp import time from torch.utils.data import Dataset, DataLoader from modules.data import WeatherBenchDatasetIterative # Utils def _inner(x, y): result = np.matmul(x[..., np.newaxis, :], y[..., :, np.newaxis]) return result[..., 0, 0] def inner_product(x, y, dim): return xr.apply_ufunc(_inner, x, y, input_core_dims=[[dim], [dim]]) def create_iterative_observations_healpix(ds, lead_time, max_lead_time, nb_timesteps, test_years, nodes): lead_times = np.arange(lead_time, max_lead_time + lead_time, lead_time) data = ds.to_array(dim='level', name='Dataset').transpose('time', 'node', 'level') n_samples = data.isel(time=slice(0, -nb_timesteps*lead_time)).shape[0] - max_lead_time obs_list = [] for lead in lead_times: obs_list.append(data.isel(time=slice(lead, lead + n_samples)).isel(level=slice(0, 2)).values) observations_numpy = np.array(obs_list) # Lat lon coordinates nside = int(np.sqrt(nodes/12)) out_lon, out_lat = hp.pix2ang(nside, np.arange(nodes), lonlat=True) # Actual times start = np.datetime64(test_years[0], 'h') + np.timedelta64(lead_time, 'h') stop = start + np.timedelta64(n_samples, 'h') times = np.arange(start, stop) # Variables var_dict_out = {var: None for var in ['z', 't']} das = []; lev_idx = 0 for var, levels in var_dict_out.items(): if levels is None: das.append(xr.DataArray( observations_numpy[:, :, :, lev_idx], dims=['lead_time', 'time', 'node'], coords={'lead_time': lead_times, 'time': times, 'node': np.arange(nodes)}, name=var )) lev_idx += 1 else: nlevs = len(levels) das.append(xr.DataArray( observations_numpy[:, :, :, lev_idx:lev_idx+nlevs], dims=['lead_time', 'time', 'node', 'level'], coords={'lead_time': lead_times, 'time': valid_time, 'node': nodes, 'level': nlevs}, name=var )) lev_idx += nlevs observation_ds = xr.merge(das) observation_ds = observation_ds.assign_coords({'lat': out_lat, 'lon': out_lon}) return observation_ds def create_iterative_observations_hp(input_dir, test_years, lead_time, max_lead_time, nside, nb_timesteps=2): z500 = xr.open_mfdataset(f'{input_dir}geopotential_500/*.nc', combine='by_coords').sel(time=slice(*test_years)) t850 = xr.open_mfdataset(f'{input_dir}temperature_850/*.nc', combine='by_coords').sel(time=slice(*test_years)) test_data = xr.merge([z500, t850], compat='override') n_samples = test_data.isel(time=slice(0, -nb_timesteps*lead_time)).dims['time'] - max_lead_time nb_iter = max_lead_time // lead_time n_pixels = 12*(nside**2) # Lead times lead_times = np.arange(lead_time, max_lead_time + lead_time, lead_time) # Lat lon coordinates out_lon, out_lat = hp.pix2ang(nside, np.arange(n_pixels), lonlat=True) # Actual times start = np.datetime64(test_years[0], 'h') + np.timedelta64(lead_time, 'h') stop = start + np.timedelta64(n_samples, 'h') times = np.arange(start, stop, 1) # Variables data_vars = ['z', 't'] var_dict_out = {var: None for var in data_vars} data = np.zeros((2, nb_iter, n_samples, 32, 64)) for i in range(nb_iter): data[0, i, :, :, :] = test_data.z.isel(time=slice(lead_time*(i+1), lead_time*(i+1) + n_samples)).values data[1, i, :, :, :] = test_data.t.isel(time=slice(lead_time*(i+1), lead_time*(i+1) + n_samples)).values das = []; lev_idx = 0 for var in data_vars: das.append(xr.DataArray( data[lev_idx, :, :, :], dims=['lead_time', 'time', 'node'], coords={'lead_time': lead_times, 'time': times, 'node': np.arange(n_pixels)}, name=var )) lev_idx += 1 observations = xr.merge(das) observations = observations.assign_coords({'lat': out_lat, 'lon': out_lon}) return observations def create_iterative_observations_eq(input_dir, test_years, lead_time, max_lead_time, nside, nb_timesteps=2): z500 = xr.open_mfdataset(f'{input_dir}geopotential_500/*.nc', combine='by_coords').sel(time=slice(*test_years)) t850 = xr.open_mfdataset(f'{input_dir}temperature_850/*.nc', combine='by_coords').sel(time=slice(*test_years)) test_data = xr.merge([z500, t850], compat='override') n_samples = test_data.isel(time=slice(0, -nb_timesteps*lead_time)).dims['time'] - max_lead_time nb_iter = max_lead_time // lead_time n_pixels = 12*(nside**2) # Lead times lead_times = np.arange(lead_time, max_lead_time + lead_time, lead_time) # Actual times start = np.datetime64(test_years[0], 'h') + np.timedelta64(lead_time, 'h') stop = start + np.timedelta64(n_samples, 'h') times = np.arange(start, stop, 1) # Variables data_vars = ['z', 't'] var_dict_out = {var: None for var in data_vars} data = np.zeros((2, nb_iter, n_samples, 32, 64)) for i in range(nb_iter): data[0, i, :, :, :] = test_data.z.isel(time=slice(lead_time*(i+1), lead_time*(i+1) + n_samples)).values data[1, i, :, :, :] = test_data.t.isel(time=slice(lead_time*(i+1), lead_time*(i+1) + n_samples)).values das = []; lev_idx = 0 for var in data_vars: das.append(xr.DataArray( data[lev_idx, :, :, :, :], dims=['lead_time', 'time', 'lat', 'lon'], coords={'lead_time': lead_times, 'time': times, 'lat': test_data.lat.values, 'lon': test_data.lon.values}, name=var )) lev_idx += 1 observations = xr.merge(das) return observations # Predict def create_iterative_predictions_healpix(model, device, dg): batch_size = dg.batch_size delta_t = dg.dataset.lead_time max_lead_time = dg.dataset.max_lead_time initial_lead_time = delta_t nodes = dg.dataset.nodes nside = int(np.sqrt(nodes/12)) n_samples = dg.dataset.n_samples in_feat = dg.dataset.in_features out_feat = dg.dataset.out_features data_vars = dg.dataset.mean.level.values.tolist()[:out_feat] train_std = dg.dataset.std.values[:out_feat] train_mean = dg.dataset.mean.values[:out_feat] # Lead times lead_times = np.arange(delta_t, max_lead_time + delta_t, delta_t) # Lat lon coordinates out_lon, out_lat = hp.pix2ang(nside,
np.arange(nodes)
numpy.arange
import os from gym import error, spaces from gym.utils import seeding import numpy as np from gym.envs.flex import flex_env import pygame as pg import itertools from pygame.locals import * from OpenGL.GL import * from OpenGL.GLU import * from scipy.spatial.distance import cdist from scipy.spatial.transform import Rotation as R try: import bindings as pyFlex except ImportError as e: raise error.DependencyNotInstalled( "{}. (HINT: PyFlex Binding is not installed correctly)".format(e)) class PlasticFlippingEnv(flex_env.FlexEnv): def __init__(self): self.resolution = 32 self.direct_info_dim = 13 obs_size = self.resolution * self.resolution *1 + self.direct_info_dim self.frame_skip = 10 self.mapHalfExtent = 4 self.mapPartitionSize = 3 self.idxPool = np.array([x for x in itertools.product(np.arange(self.mapPartitionSize) - int( self.mapPartitionSize / 2), np.arange(self.mapPartitionSize) - int(self.mapPartitionSize / 2))]) self.numInitClusters = 1 self.randomCluster = True self.clusterDim = np.array([5,2,5]) action_bound = np.array([[-10, -10, -10, -np.pi / 2], [ 10, 10, 10, np.pi / 2]]) obs_high = np.ones(obs_size) * np.inf obs_low = -obs_high observation_bound = np.array([obs_low, obs_high]) flex_env.FlexEnv.__init__(self, self.frame_skip, obs_size, observation_bound, action_bound, scene=2, viewer=0) self.metadata = { 'render.modes': ['human', 'rgb_array'], 'video.frames_per_second': int(np.round(1.0 / self.dt)) } self.action_scale = (action_bound[1] - action_bound[0]) / 2 self.barDim = np.array([1.5, 2.0, 0.8]) # self.goal_gradients = np.zeros((self.numInstances,self.resolution,self.resolution)) self.initClusterparam = np.zeros( (self.numInstances, 6 * self.numInitClusters)) self.rolloutCnt = 0 self.stage = np.ones(self.numInstances) self.rolloutRet = np.zeros(self.numInstances) self.currCurriculum = 0 self.rwdBuffer = [[0, 0, 0] for _ in range(100)] print("============================================Flipping================================================") def angle_to_rot_matrix(self, angles): rot_vec = np.ones((self.numInstances, 2, 2)) rot_vec[:, 0, 0] = np.cos(angles) rot_vec[:, 0, 1] = -np.sin(angles) rot_vec[:, 1, 0] = np.sin(angles) rot_vec[:, 1, 1] = np.cos(angles) return rot_vec def _step(self, action): action = action * self.action_scale prev_bar_state, prev_part_state, prev_part_heights,prev_part_vel = self.get_state() rot_mat = self.angle_to_rot_matrix(action[:, 3]) transformed_action = np.zeros((self.numInstances, 6)) for i in range(action.shape[0]): bar_rot = R.from_euler('x',prev_bar_state[i,1,0]) action_trans = bar_rot.apply(action[i,0:3]) transformed_action[i, 0:3] = action_trans + prev_bar_state[i, 0] flex_action = np.zeros((self.numInstances, 7)) flex_action[:, 0] = transformed_action[:, 0] flex_action[:, 1] = transformed_action[:, 1] flex_action[:, 2] = transformed_action[:, 2] flex_action[:, 3] = prev_bar_state[:, 1, 0] + action[:, 3] flex_action[:, 4] = 0 flex_action[:, 5] = 0 flex_action[:, 6] = 0 prev_height_diff = np.min(prev_part_heights,axis=1)-prev_bar_state[:,0,1] prev_com_xz = np.mean(prev_part_state,axis=1) # Simulation done = self.do_simulation(flex_action, self.frame_skip) curr_bar_state, curr_part_state, curr_part_heights,curr_part_vels = self.get_state() curr_com_xz = np.mean(curr_part_state,axis=1) obs = self._get_obs() height_diff = np.min(curr_part_heights,axis=1)-curr_bar_state[:,0,1] curr_total_heat = np.zeros(self.numInstances) curr_total_heat_cnt = np.zeros(self.numInstances) ang_vels = np.zeros(self.numInstances) ang_vels_full = np.zeros((self.numInstances,3)) ang_vels_res = np.zeros(self.numInstances) for i in range(self.numInstances): height = height_diff[i] curr_part_vel = curr_part_vels[i] bar_rot = R.from_euler('x',curr_bar_state[i,1,0]) currParts = np.concatenate([curr_part_state[i,:,0,np.newaxis],curr_part_heights[i,:,np.newaxis],curr_part_state[i,:,1,np.newaxis]],axis=1) rel_pos = currParts-curr_bar_state[i,0] trans_pos = bar_rot.inv().apply(rel_pos) ang_vel = self.get_angular_vel(currParts,curr_part_vel) # w = np.mean(rel_pos,axis=0)[1] if np.mean(rel_pos,axis=0)[1]>0.5 else 0 w = 1 if np.mean(rel_pos,axis=0)[1]>0.5 else 0 # if(i==0): # print(np.mean(rel_pos,axis=0)[1]) # print("Vel mag", np.mean(np.linalg.norm(curr_part_vel,axis=1))) ang_vels_full[i] = 5*ang_vel*w ang_vel_proj =np.dot(ang_vel,np.array([1,0,0]))*w ang_vel_res = np.linalg.norm(ang_vel - ang_vel_proj*np.array([1,0,0])) ang_vels[i] = np.clip(4*(ang_vel_proj),-1,1) # ang_vels[i] = -4*(ang_vel_proj) ang_vels_res[i] = (ang_vel_res) # Heavy penalty on low particle heights # Clipped ang vel val # Only height reward self.set_aux_info(ang_vels_full) height_diff[height_diff>0] = 0.1+height_diff[height_diff>0]*10 height_diff[height_diff<0] *= 0.1 rewards = 0.1*0*height_diff+ang_vels # print(ang_vels[0]) # if self.currCurriculum == 1: # rewards -=-ang_vels_res self.rolloutRet += rewards info = { # 'Total Reward': rewards[0], 'Height' : 0.1*height_diff[0], 'ang_vel': ang_vels[0], # 'com_diff': com_diff[0] } reward_decomp = [0,0,0] if (len(self.rwdBuffer) >= 100): self.rwdBuffer.pop(0) self.rwdBuffer.append(reward_decomp) return obs, rewards, done, info def _get_obs(self): bar_states, part_states, part_heights,part_vels = self.get_state() obs_list = [] for i in range(self.numInstances): stage = self.stage[i] part_state = part_states[i] valid_idx = (part_state[:, 0] > -self.mapHalfExtent) & (part_state[:, 0] < self.mapHalfExtent) & ( part_state[:, 1] > -self.mapHalfExtent) & (part_state[:, 1] < self.mapHalfExtent) part_state = part_state[valid_idx] part_height = part_heights[i] part_height = part_height[valid_idx] part_vel = part_vels[i] part_vel = part_vel[valid_idx] bar_state = bar_states[i] bar_y_rot_vec = np.array([np.cos(bar_state[1, 1]), np.sin(bar_state[1, 1])]) # bar_rot = np.zeros((2, 2)) # bar_rot[0, 0] = bar_y_rot_vec[0] # bar_rot[0, 1] = -bar_y_rot_vec[1] # bar_rot[1, 0] = bar_y_rot_vec[1] # bar_rot[1, 1] = bar_y_rot_vec[0] # density = self.get_particle_density( # part_state, bar_state, bar_rot, normalized=True) # height_map = self.get_mean_height_map(part_state, bar_state, bar_rot, part_height) part_pos_xyz = np.concatenate([part_state[:,0,np.newaxis],part_height[:,np.newaxis],part_state[:,1,np.newaxis]],axis=1) height_map = self.get_mean_height_map(part_pos_xyz, bar_state) # if(i==0): # print(np.max(heightz)) ang_vel = self.get_angular_vel(part_pos_xyz,part_vel) #3 bar_pos = bar_state[0] # 3 bar_ang_x = np.array([np.cos(bar_state[1, 0]), np.sin(bar_state[1, 0])]) # 2 bar_vel = bar_state[2] # 3 bar_ang_vel_x = np.array([np.cos(bar_state[3, 0]), np.sin(bar_state[3, 0])]) # 2 # if(i==0): # print(part_pos_xyz) # print(part_vel) # print(ang_vel) bar_info = np.concatenate([bar_pos, bar_ang_x, bar_vel, bar_ang_vel_x,bar_vel]) obs = np.concatenate( [bar_info, height_map.flatten() ]) obs_list.append(obs) return np.array(obs_list) def get_particle_density(self, particles, bar_state, rot, normalized=True, width=2.5): if (particles.shape[0] == 0): return np.zeros((self.resolution, self.resolution)) particles -= bar_state[0, (0, 2)] particles = np.matmul(particles, rot.transpose()) particles = np.clip(particles, -self.mapHalfExtent, self.mapHalfExtent) H = self.get_density(particles, self.resolution, width, self.mapHalfExtent) if normalized: # H = H ** (1.0 / 2) H = H / (200) H = np.clip(H, 0, 1) return H def get_angular_vel(self,part_pos,part_vel): if(part_pos.shape[0]==0): return np.array([0,0,0]) return self.get_angular_vel_flex(part_pos,part_vel) def get_mean_height_map(self, particles, bar_state, normalized=True, width=2.5): if (particles.shape[0] == 0): return np.zeros((self.resolution, self.resolution)) bar_euler = bar_state[1] bar_rot = R.from_euler('x',bar_euler[0]) rel_pos = particles-bar_state[0] trans_pos = bar_rot.inv().apply(rel_pos) trans_pos = trans_pos[(trans_pos[:,0]>-self.barDim[1])&(trans_pos[:,0]<self.barDim[1])&(trans_pos[:,2]>-self.barDim[1])&(trans_pos[:,2]<self.barDim[1])&(trans_pos[:,1]>0)] # trans_pos[:,(0,2)] = np.clip(trans_pos[:,(0,2)], -self.barDim[1], self.barDim[1]) H = self.get_height_map(trans_pos[:,(0,2)], trans_pos[:,1], self.resolution, width, self.mapHalfExtent) # rel_pos = particles-np.array([bar_state[0,0],0,bar_state[0,2]]) # trans_pos = bar_rot.inv().apply(rel_pos) # trans_pos = trans_pos[(trans_pos[:,0]>-self.barDim[1])&(trans_pos[:,0]<self.barDim[1])&(trans_pos[:,2]>-self.barDim[1])&(trans_pos[:,2]<self.barDim[1])&(trans_pos[:,1]>0)] # trans_pos[:,(0,2)] = np.clip(trans_pos[:,(0,2)], -self.barDim[1], self.barDim[1]) # H = self.get_height_map(rel_pos[:,(0,2)], rel_pos[:,1], self.resolution, width, self.mapHalfExtent) return H def get_state(self): full_state = flex_env.FlexEnv.get_state(self) numPart = (full_state.shape[1]-4)//2 part_state = full_state[:, 4:4+numPart, (0, 2)] part_vel = full_state[:, 4+numPart:4+2*numPart, :] bar_state = full_state[:, :4, :] part_heights = full_state[:, 4:4+numPart, 1] return bar_state, part_state, part_heights, part_vel def _reset(self): self.rwdBuffer = [[0, 0, 0] for _ in range(100)] print("Return at current rollout: ", self.rolloutRet) print("Mean Return at current rollout: ", np.mean(self.rolloutRet)) print("Current Curriculum: ",self.currCurriculum) if(np.mean(self.rolloutRet)>100): self.currCurriculum = 1 self.rolloutRet = np.zeros(self.numInstances) if self.randomCluster: self.idxPool = np.array([[0, 0]]) # self.idxPool = np.array([x for x in itertools.product(np.arange(self.mapPartitionSize) - int( # self.mapPartitionSize / 2), np.arange(self.mapPartitionSize) - int(self.mapPartitionSize / 2))]) # Pre-flex reset calculation self.initClusterparam = np.zeros( (self.numInstances, 6 * self.numInitClusters)) for i in range(self.numInstances): indices = np.random.choice( np.arange(self.idxPool.shape[0]), size=self.numInitClusters, replace=False) for j in range(self.numInitClusters): self.initClusterparam[i, (j * 6, j * 6 + 2) ] = self.idxPool[indices[j]] * 2.5 self.initClusterparam[i,j*6+1] = 6 self.initClusterparam[i, j * 6 + 3:j * 6 + 6] = self.clusterDim self.setInitClusterParam(self.initClusterparam) flex_env.FlexEnv._reset(self) # Post-flex reset calculation self.setMapHalfExtent(self.mapHalfExtent) pos = np.zeros((self.numInstances, 3)) # pos[:,0] = 1 # pos[:,2] = 1 # pos[:,2] = -0.4 # pos[:,1] = np.random.uniform(self.minHeight,2,(self.numInstances)) # pos[:, 1] = self.good_height # Set the height at fixed good height rot = np.zeros((self.numInstances, 3)) # rot[:,0] = np.pi/2 rot[:, 2] = 0 # Do not control the z axis rotation # pos = np.zeros((self.numInstances, 2)) # pos[:, 0] = -1.8 # pos[:, 1] = -1.8 # rot = np.zeros((self.numInstances,1)) # rot[:,0] = np.pi/4 vel = np.zeros((self.numInstances, 3)) # vel[:, 1] = 0 # Set vertical velocity to zero angVel = np.zeros((self.numInstances, 3)) # angVel[:, 2] = 0 # Set angular velocity around z to be 0 # angVel[:, 0] = 0 # Set angular velocity around x to be 0 barDim = np.tile(self.barDim, (self.numInstances, 1)) controllers = np.concatenate([pos, rot, vel, angVel, barDim], axis=1) self.set_controller(controllers) self.rolloutCnt += 1 return self._get_obs() def _render(self, mode='human', close=False): if (self.viewerId == 2 or self.viewerId == 3): if (self.viewerId == 2 and not self.screen): pg.init() self.screen = pg.display.set_mode(self.screen_size, DOUBLEBUF | OPENGL) elif (self.viewerId == 3 and not self.screen): pg.init() self.screen = pg.display.set_mode(self.screen_size) width = self.screen_size[0] height = self.screen_size[1] gap = self.sub_screen_gap if (self.viewerId == 3): tl_surface = pg.Surface( (width / 2 - gap / 2, height / 2 - gap / 2)) tr_surface = pg.Surface( (width / 2 - gap / 2, height / 2 - gap / 2)) ll_surface = pg.Surface( (width / 2 - gap / 2, height / 2 - gap / 2)) lr_surface = pg.Surface( (width / 2 - gap / 2, height / 2 - gap / 2)) self.pygame_draw([tl_surface, tr_surface, ll_surface, lr_surface]) else: glClear(GL_COLOR_BUFFER_BIT | GL_DEPTH_BUFFER_BIT) tl_surface = (0, 0, width / 2 - gap / 2, height / 2 - gap / 2) tr_surface = (width / 2 + gap / 2, 0, width / 2 - gap / 2, height / 2 - gap / 2) ll_surface = (0, height / 2 + gap / 2, width / 2 - gap / 2, height / 2 - gap / 2) lr_surface = (width / 2 + gap / 2, height / 2 + gap / 2, width / 2 - gap / 2, height / 2 - gap / 2) self.pygame_draw_GL([tl_surface, tr_surface, ll_surface, lr_surface]) return flex_env.FlexEnv._render(self) def pygame_draw_GL(self, surfaces): obs = self._get_obs() tl = surfaces[0] tr = surfaces[1] ll = surfaces[2] lr = surfaces[3] part_map = obs[0, self.direct_info_dim:self.direct_info_dim + self.resolution * self.resolution] goal_map = obs[0, self.direct_info_dim + self.resolution * self.resolution:self.direct_info_dim + 2 * (self.resolution * self.resolution)] particle_goal_map = obs[0, self.direct_info_dim + 2 * self.resolution * self.resolution:self.direct_info_dim + 3 * (self.resolution * self.resolution)] # bar_map = obs[0, 8 + 2 * self.resolution * # self.resolution:8 + 3 * (self.resolution * self.resolution)] # bar_map = np.reshape( # bar_map, (self.resolution, self.resolution)).astype(np.float64) goal_map = np.reshape( goal_map, (self.resolution, self.resolution)).astype(np.float64) part_map = np.reshape( part_map, (self.resolution, self.resolution)).astype(np.float64) particle_goal_map = np.reshape( particle_goal_map, (self.resolution, self.resolution)).astype(np.float64) # glBegin(GL_LINES) # glVertex2d(50,50) # glVertex2d(50, 100) # glVertex2d(100, 100) # glVertex2d(100, 50) # glEnd() # self.draw_grid_GL(tl, part_map, 0, 1) self.draw_grid_GL(tr, goal_map, 0, 1) self.draw_grid_GL(lr, part_map, 0, 1) self.draw_grid_GL(ll, particle_goal_map, 0, 1) # def pygame_draw(self, surfaces): obs = self._get_obs() tl = surfaces[0] tr = surfaces[1] ll = surfaces[2] lr = surfaces[3] tl.fill([200, 200, 200]) tr.fill([200, 200, 200]) ll.fill([200, 200, 200]) lr.fill([200, 200, 200]) height_map = obs[0, self.direct_info_dim:self.direct_info_dim + self.resolution * self.resolution] # heat_map = obs[0, self.direct_info_dim+ self.resolution * self.resolution:self.direct_info_dim + self.resolution * self.resolution*2] height_map = np.reshape( height_map, (self.resolution, self.resolution)).astype(np.float64) # heat_map = np.reshape( # heat_map, (self.resolution, self.resolution)).astype(np.float64) # self.draw_grid(tl, bar_map, 0, 1) self.live_rwd(tl, self.rwdBuffer) # self.draw_grid(tr, goal_map, 0, 1) # self.live_pc(ll,self.curr_pc) self.draw_grid(ll, height_map, 0, 1) # self.draw_grid(lr, heat_map, 0, 1) # self.screen.blit(tl, (0, 0)) self.screen.blit(tr, (self.screen.get_width() / 2 + self.sub_screen_gap / 2, 0)) self.screen.blit(ll, (0, self.screen.get_height() / 2 + self.sub_screen_gap / 2)) self.screen.blit(lr, ( self.screen.get_width() / 2 + self.sub_screen_gap / 2, self.screen.get_height() / 2 + self.sub_screen_gap / 2)) def live_rwd(self, surface, rwds): width = surface.get_width() height = surface.get_height() rwds = np.array(rwds) for j in range(rwds.shape[1]): rwd = rwds[:, j] # print(rwd) for i in range(len(rwd) - 1): x0 = i / float(len(rwd)) * width y0 = height / 2 - (rwd[i]) * (height / 2) x1 = (i + 1) / float(len(rwd)) * width y1 = height / 2 - (rwd[i + 1]) * (height / 2) if j == 0: color = 255 *
np.array([1, 0, 0])
numpy.array
#!/usr/bin/env python __doc__ = """binaryBHexp ======== The binary Black Hole explorer. Generates visualizations of a precessing binary black hole merger and the final remnant black hole. Example usage: ./binaryBHexp --q 2 --chiA 0.2 0.7 -0.1 --chiB 0.2 0.6 0.1 By clicking and dragging on the movie as it plays, you change the viewing angle and see how the waveform changes. """ __copyright__ = "Copyright (C) 2018 <NAME>" __email__ = "<EMAIL>" __status__ = "testing" __author__ = "<NAME>" __version__ = "1.0.2" __license__ = """ Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. """ import numpy as np import os #if os.environ.get('DISPLAY','') == '': # print('No display found. Using non-interactive Agg backend') # import matplotlib as mpl # mpl.use('Agg') import matplotlib.pyplot as P import argparse from scipy.interpolate import UnivariateSpline from scipy.interpolate import InterpolatedUnivariateSpline import surfinBH import NRSur7dq2 from NRSur7dq2 import harmonics from mpl_toolkits.mplot3d import axes3d from mpl_toolkits.mplot3d import proj3d import matplotlib.animation as animation from matplotlib.patches import FancyArrowPatch from matplotlib import cm import matplotlib.colors as colors from matplotlib.colors import LogNorm P.style.use('seaborn') use_palettable = False try: import palettable use_palettable = True except: print("palettable not found, using regular old colors. Get palettable" \ + " with 'pip install palettable' to get fancy colors.") if use_palettable: from palettable.wesanderson import Aquatic1_5 from palettable.wesanderson import Darjeeling2_5 from palettable.wesanderson import Darjeeling3_5 from palettable.wesanderson import FantasticFox2_5 from palettable.wesanderson import GrandBudapest5_5 from palettable.wesanderson import GrandBudapest1_4 from palettable.wesanderson import GrandBudapest4_5 from palettable.wesanderson import GrandBudapest3_6 from palettable.wesanderson import Zissou_5 from palettable.wesanderson import Royal1_4 colors_aq_15 = Aquatic1_5.mpl_colors colors_dj_25 = Darjeeling2_5.mpl_colors colors_dj_35 = Darjeeling3_5.mpl_colors colors_ff_25 = FantasticFox2_5.mpl_colors colors_gb_55 = GrandBudapest5_5.mpl_colors colors_gb_14 = GrandBudapest1_4.mpl_colors colors_gb_45 = GrandBudapest4_5.mpl_colors colors_gb_36 = GrandBudapest3_6.mpl_colors colors_zs_5 = Zissou_5.mpl_colors colors_ry_14 = Royal1_4.mpl_colors colors_dict = { 'BhA_traj': colors_zs_5[2], 'BhB_traj': colors_gb_14[2], 'BhA_spin': colors_gb_45[3], 'BhB_spin': colors_aq_15[1], 'BhC_spin': colors_zs_5[0], 'L': colors_gb_55[1], 'J': colors_aq_15[0], 'info': colors_aq_15[0], 'h+': colors_dj_25[3], 'hx': colors_dj_25[1], } else: colors_dict = { 'BhA_traj': 'indianred', 'BhB_traj': 'rebeccapurple', 'BhA_spin': 'goldenrod', 'BhB_spin': 'steelblue', 'BhC_spin': 'forestgreen', 'L': 'orchid', 'info': 'k', 'h+': 'tomato', 'hx': 'steelblue', } # Make very low def video. This is needed for pypi. LOW_DEF = False # Do some hacks for hangup movies HANGUP_HACKS = False # number of frames per orbit PTS_PER_ORBIT = 30 if LOW_DEF: PTS_PER_ORBIT = 15 # Time at which to freeze video for 5 seconds FREEZE_TIME = -100 zorder_dict = { 'contourf': -200, 'info_text': 200, 'notice_text': 100, 'traj': 100, 'Bh': 150, 'spin': 90, 'L': 150, 'J': 90, } class Arrow3D(FancyArrowPatch): def __init__(self, vecs, *args, **kwargs): FancyArrowPatch.__init__(self, (0,0), (0,0), *args, **kwargs) self._verts3d = vecs def set_arrow_at_origin(self, vec): xs = [0, vec[0]] ys = [0, vec[1]] zs = [0, vec[2]] self._verts3d = xs, ys, zs def set_BH_spin_arrow(self, Bh_loc, mass, chi_vec, \ use_Kerr=True): """ By default, the length of the arrow is equal 10*a, where a is the Kerr parameter of the BH. Intead , if use_Kerr is False, it is equal to 12*S, where S is the spin angular momentum of the BH, S = m * a. """ x, y, z = Bh_loc if use_Kerr: # Use a different scale factor than that of L, just to make # it extra clear that you shouldn't compare the two arrows. scale_factor = 10 u, v, w = chi_vec*mass else: scale_factor = 12 u, v, w = chi_vec*mass*mass xs = [x, x+u*scale_factor] ys = [y, y+v*scale_factor] zs = [z, z+w*scale_factor] self._verts3d = xs, ys, zs def set_angular_momentum_arrow(self, L, scale_factor=12): #Place the base at center. xs = [0, L[0]*scale_factor] ys = [0, L[1]*scale_factor] zs = [0, L[2]*scale_factor] self._verts3d = xs, ys, zs def reset(self): self._verts3d = None def draw(self, renderer): if self._verts3d is not None: xs3d, ys3d, zs3d = self._verts3d xs, ys, zs = proj3d.proj_transform(xs3d, ys3d, zs3d, renderer.M) self.set_positions((xs[0],ys[0]),(xs[1],ys[1])) FancyArrowPatch.draw(self, renderer) #---------------------------------------------------------------------------- def quat_between_vecs(u, v): """ Computes quaternion for rotation from one vector to another """ def normalize(v): return v/np.linalg.norm(v) def quat_fromaxisangle(axis, angle): half_sin = np.sin(0.5 * angle) half_cos = np.cos(0.5 * angle) return np.array([half_cos, \ half_sin*axis[0], \ half_sin*axis[1], \ half_sin*axis[2]]) axis = normalize(np.cross(u, v)) angle = np.arccos(np.dot(normalize(u), normalize(v))) return quat_fromaxisangle(axis, angle) #---------------------------------------------------------------------------- def get_BH_shape(mass, chi): """ Get an ellipsoid according Kerr-Schild horizon for a BH, with center at origin, and spin along z-direction. """ a_Kerr = mass*np.linalg.norm(chi) rplus = mass + np.sqrt(mass**2 - a_Kerr**2) equitorial_rad = np.sqrt(rplus**2 + a_Kerr**2) polar_rad = rplus # ellipsoid at origin u, v = np.meshgrid(np.linspace(0,2*np.pi,30), \ np.arccos(np.linspace(-1,1,15))) x = equitorial_rad*np.cos(u)*np.sin(v) y = equitorial_rad*np.sin(u)*np.sin(v) z = polar_rad*np.cos(v) return [x, y, z] #---------------------------------------------------------------------------- def draw_black_hole(ax, shape_Bh, center, chi): """ Draws an ellipsoid according Kerr-Schild horizon for a BH. Takes an ellipsoid at origin, rotates polar axis along spin direction, and shifts center to BH center """ x, y, z = np.copy(shape_Bh) array_shape = x.shape # rotate ellipsoid such that poles are along spin direction if np.linalg.norm(chi) > 1e-6: # can't do norms, but don't need rotation # flatten meshgrid coords = np.vstack([x.ravel(), y.ravel(), z.ravel()]) # rotate ellipsoid quat = quat_between_vecs([0,0,1], chi) coords = surfinBH._utils.transformTimeDependentVector(quat, coords, \ inverse=0) # unflatten to get meshgrid again x = coords[0].reshape(array_shape) y = coords[1].reshape(array_shape) z = coords[2].reshape(array_shape) # shift center x += center[0] y += center[1] z += center[2] ax.plot_surface(x, y, z, color='k', linewidth=0, alpha=0.9, \ zorder=zorder_dict['Bh']) #---------------------------------------------------------------------------- def spline_interp(newX, oldX, oldY, allowExtrapolation=False): """ Interpolates using splnes. If allowExtrapolation=True, extrapolates to zero. """ if len(oldY) != len(oldX): raise Exception('Lengths dont match.') if not allowExtrapolation: if np.min(newX) - np.min(oldX) < -1e-5 \ or np.max(newX) > np.max(oldX) > 1e-5: print(np.min(newX), np.min(oldX), np.max(newX), np.max(oldX)) print(np.min(newX) < np.min(oldX)) print(np.max(newX) > np.max(oldX)) raise Exception('Trying to extrapolate, but '\ 'allowExtrapolation=False') if not np.all(np.diff(oldX) > 0): raise Exception('oldX must have increasing values') # returns 0 when extrapolating newY = InterpolatedUnivariateSpline(oldX, oldY, ext=1)(newX) return newY #---------------------------------------------------------------------------- def get_trajectory(separation, quat_nrsur, orbphase_nrsur, bh_label): """ Gets trajectory of a component BH in a binary given the separation, the coprecessing frame quaternion and orbital phase in the coprecessing frame. """ if bh_label == 'A': offset = 0 else: offset = np.pi x_copr = separation * np.cos(orbphase_nrsur+offset) y_copr = separation * np.sin(orbphase_nrsur+offset) z_copr = np.zeros(len(x_copr)) Bh_traj_copr = np.array([x_copr, y_copr, z_copr]) Bh_traj = surfinBH._utils.transformTimeDependentVector(quat_nrsur, \ Bh_traj_copr, inverse=0) return Bh_traj #----------------------------------------------------------------------------- def get_uniform_in_orbits_times(t, phi_orb, PTS_PER_ORBIT): """ returns sparse time array such that there are PTS_PER_ORBIT points in each orbit. """ # get numer of orbits n_orbits = int(abs((phi_orb[-1] - phi_orb[0])/(2*np.pi))) # get sparse times such that there are PTS_PER_ORBIT points in each orbit n_pts = int(n_orbits*PTS_PER_ORBIT) phi_orb_sparse = np.linspace(phi_orb[0], phi_orb[-1], n_pts) t_sparse = np.interp(phi_orb_sparse, phi_orb, t) return t_sparse #---------------------------------------------------------------------------- def get_omegaOrb_from_sparse_data(t_sparse, phiOrb_sparse): """ Computes orbital frequency from sparse data using splines. """ # spline interpolant for phase phiOrb_spl = UnivariateSpline(t_sparse, phiOrb_sparse, s=0) # spline for phase derivative omegaOrb_spl = phiOrb_spl.derivative() return omegaOrb_spl(t_sparse) #---------------------------------------------------------------------------- def get_separation_from_omega(omega, mA, mB, chiA, chiB, LHat, pnorder=3.5): """ Roughly 3.5 PN accurate separation. This is not verified or tested, so don't use this for real science, only visualization. """ eta = mA*mB deltaM = mA - mB Sigma_vec = mB*chiB - mA*chiA S_vec = mA**2.*chiA + mB**2.*chiB # some dot products chiAL =
np.sum(LHat*chiA, axis=1)
numpy.sum
import configparser from datetime import datetime from math import cos from skimage import filters from skimage import measure from math import radians from scipy.interpolate import splprep, splev import numpy as np import pandas as pd import scipy.ndimage as img """ Tools to manipulate and analyze data """ def canopy_cover(data, radius): """Computes leaf area index: ratio of leaf to ground for a certain area. Performs a convolve with an arbitrary radius to calculate how many nonzero values are present within a :param data: 2D or 3D numpy array of height data :param radius: radius of the region (in number of 0.1 m squares) :return: leaf area index computed for each point """ c = np.zeros_like(data, int) kernel = np.ones((radius * 2 + 1, radius * 2 + 1)) for x in range(data.shape[2]): d = data[:, :, x] d[d > 0] = 1 conv = img.filters.convolve(d, kernel) c[:, :, x] = conv return c def create_path_splines(points, data_shape, converter): """Create managable path splines from the thousands of datapoints""" # Unpack rows and columns from data shape rows, cols, _ = data_shape # Convert the gps information and store it into a new DataFrame path_pts = [] for p in points.itertuples(): # This gives us the data coordinates from the gps location data_y = int(converter.lat_to_y(p[1])) data_x = int(converter.lng_to_x(p[2])) path_pts.append([data_x, data_y]) np.transpose(path_pts) # Remove any duplicate points from the path, # keeping the original array order path_vals, ind = np.unique(path_pts, axis=0, return_index=True) ind = sorted(ind) path_pts = [path_pts[i] for i in ind] # Create a spline from the remaining path points # noinspection PyTupleAssignmentBalance tck, u = splprep(np.transpose(path_pts), u=None, s=0.0) return tck def create_stress_map(height, canopy, rad, threshold): """Create map showing frequently stressed areas of plot. Sums the stress masks for each individual date to determine which areas are frequently coming up stressed. :return - The 2D map of stressed locations """ # Deprecated create_suggestion_mask_v1 code ########################################################################### # # Suggestion mask data (Normalized Height + Normalized Canopy) # normh = np.divide(height, np.amax(height, axis=(0, 1))) * 50 # normc = np.divide(canopy, np.amax(canopy, axis=(0, 1))) * 50 # # # Process data to create stress mask for each snapshot # comb_data = np.add(normh, normc) # stress_dates = create_suggestion_mask_v1(comb_data, rad, threshold) ########################################################################### # Create the suggestion mask for each snapshot stress_dates = create_suggestion_mask_v2(height, canopy, rad, threshold) # Create stress map based on all data up to current date stress_map = np.zeros_like(stress_dates) for i in range(stress_dates.shape[2]): stress_map[:, :, i] = np.sum(stress_dates[:, :, 0:(i+1)], axis=2) stress_map[:, :, i] = np.divide(stress_map[:, :, i], (i+1)) return stress_map def create_suggestion_mask_v1(d, rad, threshold): """Keep this here for a little while, then delete it. Suggestion mask v1 Uses statistical methods to determine outliers below the general population of the data, and uses image processing techniques to discount the edges of the plot from skewing the results. :param d: The input data to create the mask :param rad: The radius to average and desample the data :param threshold: The percentile above which points will be filtered :return: The mask from which suggested points are chosen """ # Create a new copy of the data to work on data = np.copy(d) # filter out data less than zero data[data < 0] = 0 # Calculates each point as sum of nearby values within radius r c = np.zeros_like(data, float) kernel = np.ones((rad * 2 + 1, rad * 2 + 1)) for x in range(data.shape[2]): conv = img.filters.convolve(data[:, :, x], kernel) c[:, :, x] = conv # Downsample array into pixels with same size as convolve c = c[::rad * 2 + 1, ::rad * 2 + 1, :] fullmask = np.zeros_like(d) for i in range(c.shape[2]): # Extract the ith layer of data mask = c[:, :, i] # Use image processing morphology to smooth out data mask = img.grey_closing(mask, structure=np.ones((3, 3))) # Use Sobel edge detection to decrease weight of edges gx = img.sobel(mask, axis=0) gy = img.sobel(mask, axis=1) grad = np.hypot(gx, gy) grad = (np.divide(grad, np.amax(grad))) * 100 mask = (np.divide(mask, np.amax(mask))) * 100 mask -= grad # Calculate the threshold percentile, ignoring zeros mask[mask <= 0] = np.nan percent = np.nanpercentile(mask, threshold) mask = np.nan_to_num(mask) # Filter out data and create mask mask[mask > percent] = 0 mask[mask > 0] = 1 # Perform binary opening to remove small regions mask = img.binary_opening(mask) # Rescale mask to fit data size scale = np.divide(fullmask[:, :, 0].shape, mask.shape) fullmask[:, :, i] = img.zoom(mask, scale, order=0) return fullmask def create_suggestion_mask_v2(height, canopy, rad=4, threshold=(20, 40)): # Copy the data height_data = np.copy(height) # Silence isolated points (low canopy) height_data[canopy < 5] = 0 # Downscale dataset to 0.5m squares, taking the max within each height_data = downscale_max(height_data, rad) # Place points into stress levels stress_data = np.zeros_like(height_data) for x in range(stress_data.shape[2]): stress_layer = stress_data[:, :, x] height_layer = height_data[:, :, x] high_med_stress = np.percentile(height_layer[np.nonzero(height_layer)], threshold[0]) med_low_stress = np.percentile(height_layer[np.nonzero(height_layer)], threshold[1]) stress_layer[height_layer >= med_low_stress] = 0.01 # Low height_layer[stress_layer > 0] = 0 # silence low points stress_layer[height_layer >= high_med_stress] = 0.5 # Medium height_layer[stress_layer > 0] = 0 # silence med points stress_layer[0 < height_layer] = 0.99 # High stress_data[:, :, x] = stress_layer stress_data = rescale_like(stress_data, height) return stress_data def define_regions(data, rad): """Identify regions of high stress areas and """ region_map = np.copy(data) region_map = region_map[::rad * 2 + 1, ::rad * 2 + 1] val = filters.threshold_otsu(region_map) mask = region_map > val mask = img.binary_opening(mask, iterations=2) scale = np.divide(data.shape, mask.shape) mask = img.zoom(mask, scale, order=0) labels = measure.label(mask, background=0) regions = img.find_objects(labels) small_regions = [] for i in range(len(regions)): if np.nonzero(labels == i + 1)[0].size <= 500: labels[regions[i]] = 0 small_regions.append(i) for i in small_regions[::-1]: del regions[i] return StressMapWrapper(labels, regions) def downscale_avg(data, radius): # Calculates each point as sum of nearby values within radius r diam = 2 * radius + 1 kernel = np.ones((diam, diam)) fullmap = np.zeros_like(data, float) for x in range(data.shape[2]): conv = img.filters.convolve(data[:, :, x], kernel) fullmap[:, :, x] = conv # Downsample array into pixels with same size as convolve fullmap = fullmap[::diam, ::diam, :] return fullmap def downscale_max(data, radius): # Turn radius into diameter centered at original point diam = 2 * radius + 1 fullmap = np.zeros_like(data[::diam, ::diam, :], float) for x in range(data.shape[2]): layer = np.zeros_like(data[::diam, ::diam, 0]) for r in range((int(data.shape[0] / diam)) - 1): for c in range((int(data.shape[1] / diam)) - 1): selection = data[(r*diam):(r*diam + diam), (c*diam):(c*diam + diam), x] max_val = np.amax(selection) layer[r, c] = max_val fullmap[:, :, x] = layer return fullmap def evaluate_path_spline(spline, num_points): u_vals = np.linspace(0, 1, num_points) pts = splev(u_vals, spline) pts = pd.DataFrame(np.transpose(pts)) return pts def filter_outliers(data, rmin = 0.2, rmax = 1.0): """Sets outliers outside user defined range to zero. Calculates the average and standard deviation of the dataset. Filters out all data below rmin * std and avg + rmax * std. :param data: 2D numpy array of data to filter :param rmin: data within (r * standard deviation) of zero is set to zero :param rmax: data above (average + r * standard deviation) is set to zero :return: filtered data """ for x in range(data.shape[2]): d = np.nan_to_num(data[:, :, x]) # Silence negative values d[d < 0] = 0 # Calculate average and std avg = np.average(d[np.nonzero(d)]) std = np.std(d[np.nonzero(d)]) d[np.absolute(d) < avg - (rmin * std)] = 0 # filter points below avg d[np.absolute(d) > avg + (rmax * std)] = 0 # filter points above avg data[:, :, x] = d return data def rescale_like(data, like): # Rescale mask to fit data size # scale = np.divide(like[:, :, 0].shape, data[:, :, 0].shape) scale = np.true_divide(like[:, :, 0].shape, data[:, :, 0].shape) fullmap = np.zeros_like(like, float) for x in range(data.shape[2]): fullmap[:, :, x] = img.zoom(data[:, :, x], scale, order=0) return fullmap class DataSet4D: """This class contains all of the data for a particular mode. This class is responsible for handling the datasets for each different mode or filter. It has behaviors to change the date, perform statistics, and manipulate the data to some extent.""" def __init__(self, data, dates): # Expand dimensions if necessary if len(data.shape) == 2: data =
np.expand_dims(data, axis=2)
numpy.expand_dims
"""***************************************************************************************** MIT License Copyright (c) 2019 <NAME>, <NAME>, <NAME> Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. *****************************************************************************************""" ################################### NOTES ########################################### # - Please cite our paper when using the code: # "Accurate Coresets" # <NAME> and <NAME> and <NAME> # # - Code for other coresets, both accurate and eps-coresets, will be published soon. ##################################################################################### import numpy as np from scipy.linalg import lstsq from sympy import Matrix import random from sklearn import linear_model import matplotlib.pyplot as plt import sys from sklearn import preprocessing import time import math import scipy.linalg as spla def Caratheodory(P, u, dtype='float64'): """ Implementation of the Caratheodory Theorem(1907) input: a numpy array P containing n rows (points), each of size d, and a positive vector of weights u (that sums to 1) output:a new vector of weights new_u that satisfies : 1. new_u is positive and sums to 1 2. new_u has at most d+1 non zero entries 3. the weighted sum of P and u (input) is the same as the weighted sum of P and new_u (output) computation time: O(n^2d^2) """ while 1: n = np.count_nonzero(u) d = P.shape[1] u_non_zero = np.nonzero(u) if n <= d + 1: return u A = P[u_non_zero] reduced_vec = np.outer(A[0], np.ones(A.shape[0]-1, dtype = dtype)) A = A[1:].T - reduced_vec _, _, V = np.linalg.svd(A, full_matrices=True) v=V[-1] v = np.insert(v, [0], -1 * np.sum(v)) idx_good_alpha = np.nonzero(v > 0) alpha = np.min(u[u_non_zero][idx_good_alpha]/v[idx_good_alpha]) w = np.zeros(u.shape[0] , dtype = dtype) tmp_w = u[u_non_zero] - alpha * v tmp_w[np.argmin(tmp_w)] = 0.0 w[u_non_zero] = tmp_w w[u_non_zero][np.argmin(w[u_non_zero] )] = 0 u = w def Fast_Caratheodory(P,u,coreset_size, dtype = 'float64'): """ Our fast and accurate implementation of Caratheodory's Theorem Input: a numpy array P containing n rows (points), each of size d, and a positive vector of weights u (if u does not sum to 1, we first normalize u by its sum, then multiply u back by its original sum before returning it) Output: a new vector of positive weights new_u that satisfies : 1. new_u has at most d+1 non zero entries 2. the weighted sum of P and u (input) is the same as the weighted sum of P and new_u (output) Computation time: O(nd+logn*d^4) """ d = P.shape[1] n = P.shape[0] m = 2*d + 2 if n <= d + 1: return u.reshape(-1) u_sum = np.sum(u) u = u/u_sum chunk_size = math.ceil(n/m) current_m = math.ceil(n/chunk_size) add_z = chunk_size - int (n%chunk_size) u = u.reshape(-1,1) if add_z != chunk_size: zeros = np.zeros((add_z, P.shape[1]), dtype = dtype) P = np.concatenate((P, zeros)) zeros = np.zeros((add_z, u.shape[1]), dtype = dtype) u =
np.concatenate((u, zeros))
numpy.concatenate