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PRISMA Flow Diagram.
PMC9340845
ijspt_2022_17_5_36814_93627.jpg
0.455531
ecdadb48b6a047df8152f93014be34ec
Methodological quality of studies across content areas.Abbreviations: Concussion and Risk Prediction (CRP); Concussion and Testing (CT); Concussion and Dual Task (CDT); Dual Task in Healthy Athletes (DT); Baseline Cognition in Healthy Athletes (BN).
PMC9340845
ijspt_2022_17_5_36814_93629.jpg
0.429078
b01b7a501cab426a9b6e0168e483274c
 Distribution of experimental designs across content areas.Abbreviations: Concussion and Risk Prediction (CRP); Concussion and Testing (CT); Concussion and Dual Task (CDT); Dual Task in Health Athletes (DT); Baseline Cognition in Healthy Athletes (BN).
PMC9340845
ijspt_2022_17_5_36814_93630.jpg
0.426565
e62a49fbfd304a85baf7086b9ecc6c9d
Schedule of enrollment, interventions, and assessments
PMC9341151
13063_2022_6575_Fig1_HTML.jpg
0.376566
47cbde8eef4943dd812485f96e606baa
The genetic landscape of metastatic NSCLC patients. (A) Comparison of the mutational landscape between primary lesions and their paired lymphatic metastases. The top panel represents the number of somatic mutations in each sample. The middle panel represents the matrix of mutations in a selection of frequently mutated genes. Columns represent samples. The patients’ characteristics are presented in the following. (B) The Pearson correlation analysis of mutations in paired P-LN. P: primary lesions; LN: lymph nodes metastases.
PMC9341247
fbioe-10-909388-g001.jpg
0.403795
d955849fd0f94650a65478dbaa29ede1
The distribution of TMB of the NSCLC paired samples. (A) The comparison of TMB between primary and lymph nodes metastatic samples. (B) The comparison of TMB in primaries and lymphatic metastases between smoking and never-smoking NSCLC patients.
PMC9341247
fbioe-10-909388-g002.jpg
0.385376
6ae8d4cbcd18431e9e0c638dbef59e82
The distribution of mutational signatures of the NSCLC paired samples. (A) Comparison of mutational signatures between primary and lymph nodes metastatic samples. (B) Two distant mutational signatures were identified by the NMF analysis of the matrix of mutational proportion across tumors from primary and metastatic lesions. (C) Comparison of mutational signatures of the private alterations between primary and lymph nodes metastatic samples.
PMC9341247
fbioe-10-909388-g003.jpg
0.427823
2d6c0ff9cd7c4715b3d8808699e80f73
Association of 17 candidate metastasis-related driving genes with primary and lymphatic lesions in the Lung_MSK_2017 cohort.
PMC9341247
fbioe-10-909388-g004.jpg
0.421482
b89898e54a90434884473d43c05f252b
The gene cloning, functional analyses and breeding application of emf1. (a) The earlier flowering phenotype of emf1 compared to WT. (b) Cross‐section of WT and emf1 spikelet tomography. Scar bar, 500 μm. (c) Lodicule morphology of WT and emf1 after water absorption. Scar bar, 1 mm. (d) Changes in WT and emf1 lodicule surface area with time after water treatment. (e) The cell and cell wall morphology of lodicule of WT and emf1 at maximum flowering angle observed using transmission electron microscopy. Scar bar, 10 and 2 μm below, respectively. (f‐i) The cellulose (f), hemicellulose (g), pectin (h) and de‐esterified pectin (i) contents in WT and emf1. (j) The gene structure and functional mutation of EMF1. (k) Subcellular localization of EMF1 protein in the cell wall. Scar bar, 20 μm. (l) EMF1 interacts with GLN2 in yeast cells. (m) The FOT of OsGLN2 knockout lines. a, b indicate significant differences at P < 0.01. (n) A hypothesized model showing the molecular mechanism of EMF1 to regulate FOT in rice. (o) The haplotype analysis of EMF1 in 533 diverse cultivated rice. (p) The FOT of japonica varieties with different alleles in the C/T variants in EMF1. **P < 0.01. Significant differences were based on two‐tailed t‐tests. [Colour figure can be viewed at wileyonlinelibrary.com]
PMC9342613
PBI-20-1441-g001.jpg
0.463038
acfb5eba33794824acbee7db335521c1
Colonoscopy use 5 years to 6 months prior to CRC diagnosis for those with IBD-CRC (censored 6 months prior to CRC diagnosis).
PMC9342763
pone.0272158.g001.jpg
0.451107
0cf68e472c9c420192c859bfa730303f
Schematic representation of an observed-variable autoregressive path model examining reciprocal interactions between harsh parenting and child conduct or emotional problems, after adjusting for covariates. Lines with single arrowheads represent hypothesised direct effects. Curved lines with two arrowheads represent correlations. Analyses were conducted separately for child conduct and emotional problems
PMC9343272
787_2021_1759_Fig1_HTML.jpg
0.475331
5a2fd1d2e26a48748fb6346ae3abfb10
Correlation matrix of all variables used in the cross-lagged models. Imputed, rather than observed, values are presented. The color bar represents correlation coefficients from − 1 (red) to + 1 (blue). Blue squares represent significant positive correlations. Red squares represent significant negative correlations. Darker color tones represent larger correlation coefficients. White squares represent non-significant correlation coefficients at p < 0.05
PMC9343272
787_2021_1759_Fig2_HTML.jpg
0.447914
ccdc583ad6eb47968af15cebd0e742c1
Medical assistance in dying (MAID) in Belgium (adapted from 6).
PMC9343580
fpsyt-13-933748-g001.jpg
0.487402
686aa83e95af49999e0b76d23b8fc46e
Medical assistance in dying (MAID) in The Netherlands see text footnote 1.
PMC9343580
fpsyt-13-933748-g002.jpg
0.508854
fea2702903da496bb328047aa4a93a73
Nature of unbearable suffering (from the official reports of the FCECE)*. *Category of labels changed between 2015 and 2016.
PMC9343580
fpsyt-13-933748-g003.jpg
0.444382
c77274774390496eb21aa20d633e9edd
Decisions of the Federal Commission (from the official reports of the FCECE). *Category of labels changed between 2015 and 2016.
PMC9343580
fpsyt-13-933748-g004.jpg
0.45455
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(A) Boxplot of 35 pyroptosis-related genes’ relative expression between different types of patients. C: COVID-19 patients; NC: none-COVID-19 patients. (B) The Pearson’s correlation between 35 pyroptosis-related genes in COVID -19 patients, R value represents the Pearson’s correlation coefficient. *p < 0.05, **p < 0.01, ***p < 0.001, ****p < 0.0001.
PMC9343985
fimmu-13-888661-g001.jpg
0.420941
854b414390844e34a6600cc22ee82fe7
(A) Gene set variation analysis (GVSA) analysis shows COVID-19 patients’ leukocytes may have been significantly damaged during viral infection and are undergoing damage repair. C: COVID-19 patients; NC: none-COVID-19 patients. (B) The abundance of leukocytes between the different types of patients. *p < 0.05, **p < 0.01, ***p < 0.001, ****p < 0.0001, ns, no significance.
PMC9343985
fimmu-13-888661-g002.jpg
0.451984
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(A) Consensus clustering matrix for k = 2. (B) The heatmap of 35 pyroptosis-related genes between the two PYRclusters. Red represents high expression; blue represents low expression. (C) Boxplot of significant pyroptosis-related genes’ relative expression between two PYRclusters. (D–F) The HFD45, ventilator-free days, D-dimer levels between the two PYRclusters. *p < 0.05, **p < 0.01, ***p < 0.001, ****p < 0.0001, ns, no significance.
PMC9343985
fimmu-13-888661-g003.jpg
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(A) Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment of 570 DEGs Between two PYRclusters, “up” means these pathways of PYRcluster2 were upregulated when compared to PYRcluster1; “down” means these pathways were downregulated. (B) Leukocytes with significantly different expression levels among PYRclusters. (C) ImmuneScore calculated by “estimate” package between two PYRclusters. (D) Pearson’s correlation between expressions of 35 pyroptosis-related genes and abundance of leukocytes, R value represents the Pearson’s correlation coefficient. Annotated bars above and to the left indicate in which PYRcluster each pyroptosis-related gene or leukocyte is highly expressed.
PMC9343985
fimmu-13-888661-g004.jpg
0.478851
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(A) Heatmap of the DEGs between the gene clusters, different clinical data was shown in the annotation. (B) Pyrscore between two PYRclusters. (C, D) Pearson’s correlations between pyrscore and ventilator-free days(C), HFD45 (D), R value represents the Pearson’s correlation coefficient; grey area represents the 95% confidence interval for the linear fit. The maximum value of ventilator-free days is 28 since this 28-day time frame was initially chosen because most subjects with ARDS will have died or been extubated by Day 28. (E) Mean-squared error (MSE) of different numbers of variables revealed by the LASSO regression model. The red dots represent the MSE values; the grey lines represent the standard error (SE); the two vertical dotted lines on the left and right, respectively, represent optimal values by minimum criteria and 1-SE criteria. “Lambda” is the tuning parameter. (F) AUC of patients in the training group and test group. *p < 0.05, **p < 0.01, ***p < 0.001, ****p < 0.0001, ns, no significance.
PMC9343985
fimmu-13-888661-g005.jpg
0.453747
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(A, B, C) Pearson’s correlations between PYRsafescore and HFD45 (A), ventilator-free days (B), APACHE-II (C), R value represents the Pearson’s correlation coefficient; grey area represents the 95% confidence interval for the linear fit. (D) Heatmap of signature genes of PYRsafescore; expression of these genes was highly correlated with HFD45 and PYRsafescore. (E) Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment of signature genes of PYRsafescore. (F) Transcription factor enrichment of 570 DEGs between PYRclusters using “clusterProfiler” package based on MSigDB gene set: TFT (transcription factor targets) gene set.
PMC9343985
fimmu-13-888661-g006.jpg
0.432956
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(A) Transcription factors regulatory network of PYRcluster1. “Degree” means the number of edges connected to the node. (B) Pearson’s correlation of differentially expressed pyroptosis-related genes and transcription factors in PYRclusters; R value represents the Pearson’s correlation coefficient. Annotation on the left represents in which PYRcluster each pyroptosis-related gene is significantly highly expressed. (C) Pearson’s correlation between different clinical data and transcription factors; R value represents the Pearson’s correlation coefficient.
PMC9343985
fimmu-13-888661-g007.jpg
0.437926
3998054b83bd45138ebda811b4177646
Different patterns of pyroptosis of blood leukocytes in patients with COVID-19.
PMC9343985
fimmu-13-888661-g008.jpg
0.448432
47d3d2e7f5e04959ae64897e461a6035
Volcano plots of single site CpG effect estimates for prenatal vitamin use in 1st month of pregnancy and −log10(p-values). Percentages indicate proportion of CpG sites with p-value < 0.01 that have positive or negative effect estimate. Regression models were adjusted for sex, maternal age, gestational age, maternal education, ancestry PCs, laboratory batch, and estimated cell proportions
PMC9344645
13072_2022_460_Fig1_HTML.jpg
0.464605
8ccfb093c9444aceb3a7dcda4c1b415c
Pearson correlation of regression coefficients for the adjusted association between DNA methylation levels and prenatal vitamin use during the first month of pregnancy across all CpGs in common between EPIC/450k (n = 413,011 CpGs)
PMC9344645
13072_2022_460_Fig2_HTML.jpg
0.458836
33e9799b3ca04d87b6f5e71883b7a5a1
A Number of CpGs with DNA methylation levels associated (p-value < 0.01) with prenatal vitamin use during the first month of pregnancy unique to and in common with cohorts/tissues. B In upper triangle, correlations between CpG adjusted effect estimates with p-value < 0.01 in cross comparison, and number of such CpGs shown in lower triangle
PMC9344645
13072_2022_460_Fig3_HTML.jpg
0.515984
497a7b7c2acb45ed895b360dc5d639b6
Scatter plots of adjusted effect estimates between DAN methylation and prenatal vitamin use during the first month of pregnancy. CpGs are included with association P < 0.01 in both cohorts. A Cord blood (nCpGs = 18), B placenta (nCpGs = 101)
PMC9344645
13072_2022_460_Fig4_HTML.jpg
0.448207
b0ce9afdb3954ebc8ffe1af3caed75e8
Study population flowchart.
PMC9344948
1678-9849-rsbmt-55-e0111-2022-gf1.jpg
0.485234
406ddf56ec4f4b08bfffa8867f295d0a
Values of P/F ratio, alveolar-arterial gradient, ROX index and HACOR score at all the evaluations in survivors and non-survivors (on the left) in subjects with successful and failed NIV (on the right). The values of the HACOR score are reported as median and interquartile range, while all the other parameters are reported as mean ± standard deviation
PMC9345392
11739_2022_3058_Fig1_HTML.jpg
0.400987
3907f0f542d44f588edec5f9505af08e
Proportion of survivors and non-survivors (A, B) and subjects with successful and failed NIV (C, D) with HACOR score > 5 and ROX index < 4.88
PMC9345392
11739_2022_3058_Fig2_HTML.jpg
0.400118
4d0c06dd5638447a932290cc43b8e246
Probability of NIV failure in subjects with good and adverse prognosis
PMC9345392
11739_2022_3058_Fig3_HTML.jpg
0.425899
123ea001194249dd970ab56378a775e1
Map of the 12 states included in our analysis. Counties shaded blue had at least one case of histoplasmosis reported to public health authorities during the 4-year study period.
PMC9345522
ede-33-654-g001.jpg
0.416226
dcd82457844341649d21101180852158
Histoplasmosis results. A, Map of the estimated posterior probability of presence of Histoplasma capsulatum. B, Standard errors of the estimated posterior probability. C, Estimates and credible intervals of the state-specific intercepts for the probability of detecting a case of histoplasmosis, given H. capsulatum is present. D, County-level estimated detection posterior probability averaged over the 48 months. Note that the low estimate and wide variability for the average rate of histoplasmosis detection in Delaware shown in (C) is likely due to the fact that Delaware only has three counties with just two reported diagnosed cases throughout the study period.
PMC9345522
ede-33-654-g002.jpg
0.480422
8d9d43a3fbda41dd91e889dcc69b7081
Flow diagram of the progress through the study phases.
PMC9345644
cc9-4-e0742-g001.jpg
0.401112
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Box plots comparing the outcome scores between the two groups (ID1 and ID3) over time. T1, T2, T3, and T4 are time points at discharge, 1-mo, 3-mo, and 3.5-mo follow-up. Last panel in each graph shows the improvement in outcomes in ID3 between 3 and 3.5 mo. represents the dispatch of ICU diary (after 1- and 3-mo assessments for groups ID1 and ID3, respectively. EQ5D = European Quality of Life 5 Dimensions, HADS = Hospital Anxiety-Depression Scale, IESr = Impact of Events Revised, QOL = quality of life.
PMC9345644
cc9-4-e0742-g002.jpg
0.424949
a30ffc5c16404b9f88728cf7916a9f6e
Expression of Gal3 and related genes in human patients and mouse models of osteosarcoma(A) mRNA expression of Gal3 (LGALS3), Gal3bp (LGALS3BP), IL-6, and C1GALT1 in tumor versus paired healthy samples from osteosarcoma patients (n = 6). The level of expression was determined using microarray analysis with the robust multiarray analysis (RMA) algorithm. Correlation of IL-6 versus C1GALT1 mRNA expression in tumor samples, ∗∗p < 0.01 by Pearson’s r. (B and C) mRNA (B) and protein (C) expression of Gal3 and Gal3bp in murine osteosarcoma cell lines (K7M2, MOS-J, and POS-1) and the murine melanoma cell line B16OVA determined by qRT-PCR (n = 3) and western blotting. (D) mRNA expression of Gal3, Gal3bp, and IL-6 in tibias and lungs representing healthy versus tumor tissue from orthotopic K7M2 tumor-bearing mice determined by qRT-PCR (n = 3). The data in (B) and (D) were calculated as 2E(−ΔCt) normalized to GAPDH × 10,000 and are presented as the mean ± SD. ∗p < 0.05; ∗∗p < 0.01; ns, not significant. Student’s t test.
PMC9345771
gr1.jpg
0.416166
ad4f4119dc7f46e4a7a6679cbfb54f5f
Characterization of SFV vectors expressing Gal3 inhibitors(A) Diagrams of SFV vectors expressing Gal3 inhibitors: SFV-Gal3-C, SFV-Gal3-N, SFV-C12, and SFV-Gal3-N-C12. Constructs contained an SFV replicase sequence (composed of four nonstructural subunits [nsps]) followed by the viral subgenomic promoter (sgPr), a translation enhancer (b1) linked to the 2A FMDV protease fused in-frame to each Gal3 inhibitor sequences, and an HA tag. (B and C) Gal3 inhibitor expression in BHK-21 cells 24 h after infection with SFV vectors at an MOI of 20, as determined by western blot analysis of cell extracts (CEs) and supernatants (SNs) using an anti-HA antibody (B) and by immunofluorescence staining (C) using anti-nsp2 and anti-HA antibodies. Cell nuclei were stained with DAPI (magnification, 200×; scale bar, 100 μm). (D) Luciferase activity was determined in orthotopic K7M2 tumor-bearing mice at the indicated times after intratumoral injection of 1 × 108 VPs SFV-Luc; signal is measured in photons/s. Data represent the mean ± SD (n = 3). Images of luciferase expression in mice are shown. (E and F) Inhibition of Gal3 binding to activated T cells. CD8+ and CD4+ T cells activated with anti-CD3 and anti-CD28 antibodies and incubated with IL-10 were treated with the indicated recombinant Gal3 inhibitors at 50 μM (CD8+) or 25 μM (CD4+), with an anti-Gal3 antibody (a-Gal3) at 20 μg/mL (CD8+) or 10 μg/mL (CD4+) in the presence of 5 μg/mL recombinant Gal3 (+) for 30 min (CD8+) or 48 h (CD4+). Cells incubated without inhibitors and Gal3 indicated by (−). The binding of Gal3 was determined by flow-cytometric measurement of the mean fluorescence intensity (MFI) of Gal3 on total CD8+ and CD4+ T cells (E) or in CD8+PD1+ and CD4+PD1+ T cells (F). Data are presented as the mean ± SD (n = 3). ∗p < 0.05, ∗∗p < 0.01, ∗∗∗p < 0.001, ∗∗∗∗p < 0.0001; one-way ANOVA. N, Gal3-N; C, Gal3C; N-C12, Gal3-N-C12.
PMC9345771
gr2.jpg
0.401154
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Evaluation of the antitumor effect of SFV vectors expressing Gal3 inhibitors in osteosarcoma(A) Treatment schedule for orthotopic osteosarcoma mouse models. Tumor cells were injected intratibially on day 0. The tumors were treated with 1 × 108 VPs SFV on day 7, and tumor size and survival were monitored. (B) K7M2 tumor growth in mice treated with the indicated vectors (n = 10) or PBS (n = 9). A representative experiment is shown of two experiments with similar results. Data are shown as the mean ± SD. ∗p < 0.05, ∗∗p < 0.01, ∗∗∗p < 0.001, ∗∗∗∗p < 0.0001; extra sum-of-squares F test. (C) Individual tumor growth of the mice presented in (B). Discontinuous red line indicates time when control mice developed tumors >400 mm2. (D) Kaplan-Meier survival plot of the mice described in (A). The graph corresponds to pooled data from two experiments using SFV-Gal3-C (n = 10), SFV-Gal3-N (n = 19), SFV-Gal3-N-C12 (n = 19), SFV-C12 (n = 9), SFV-Luc (n = 10), and PBS (n = 17). ∗p < 0.05, ∗∗p < 0.01, ∗∗∗p < 0.001; log-rank test. (E) Kaplan-Meier survival curves of cured K7M2 tumor-bearing mice rechallenged with K7M2 cells (n = 5). p > 0.05 (not significant); log-rank test. (F) Tumor growth evaluation of MOS-J tumor-bearing mice treated as described in (A) with the indicated vectors (n = 9–10). Data are shown as the mean ± SD. ∗p < 0.05, ∗∗p < 0.01, ∗∗∗p < 0.001, ∗∗∗∗p < 0.0001; extra sum-of-squares F test. (G) Kaplan-Meier survival plot of the MOS-J tumor-bearing mice described in (A). ∗p < 0.05, log-rank test. (H) Kaplan-Meier survival plot of cured MOS-J tumor-bearing mice rechallenged with MOS-J cells (n = 3). ∗p < 0.05, log-rank test.
PMC9345771
gr3.jpg
0.436246
ca56425015b34d2f9eaeb551cd0f3789
Assessment of the antimetastatic effect of SFV vectors in an orthotopic K7M2 osteosarcoma mouse model(A) Summary table for survival, presence of metastases, and presence of bone tumors from two pooled experiments evaluating K7M2 tumor-bearing mice treated with the indicated SFV vectors or PBS. (B) Analysis of lung metastases. K7M2 tumor-bearing mice were analyzed on day 15 after treatment with PBS, SFV-Luc, or SFV-Gal3-N-C12, and healthy mice without tumors were used as controls. MicroCT analysis (upper images) and H&E staining (lower images) of lung tissue samples from one representative mouse in each group (magnification, 20×; scale bar, 4 mm). Quantification of the volume of the healthy lung parenchyma in all mice in the different treatment groups. Data are presented as the mean ± SD (n = 3, each group). p > 0.05 (not significant); one-way ANOVA. (C and D) Analysis of gene expression by RNA-seq. Mice bearing K7M2 tumors were treated with SFV-Gal3-N-C12 (NC12, n = 4), SFV-Luc (LUC, n = 3), or PBS (n = 5) as described in Figure 3A. On day 14 the mice were sacrificed, and total RNA was extracted from the tumors for sequencing. (C) Upon gene set enrichment analysis, an enriched gene set of prometastatic genes involved in osteosarcoma pathology was downregulated in the SFV-Gal3-N-C12 (NC12) group compared with the SFV-Luc (LUC) group at nominal p < 0.01 and false discovery rate (FDR) < 0.05. Normalized enrichment score (NES), −1.82; ∗∗padjusted < 0.01. (D) A heatmap and hierarchical clustering representing the differential expression of the most significant prometastatic genes between the treatment groups.
PMC9345771
gr4.jpg
0.400127
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Analysis of immune cell populations in primary K7M2 tumors after treatment with SFV vectors by immunohistochemistry and RNA-seq(A) Immunohistochemistry (IHC) analysis of CD3+ T cells in primary osteosarcoma tumors from mice sacrificed at 14–17 days after intratumoral treatment with the indicated vectors or PBS. Representative IHC images are shown. Quantification of CD3+ T cells presented as the percentage of cells stained positive for CD3 in IHC images (magnification, 400×; scale bar, 200 μm). CD3+ T cells were counted in five different fields in each sample, and the mean was used to perform statistical analysis. Data are shown as the mean ± SD (n = 3). p > 0.05 (not significant); one-way ANOVA. (B) Relative abundances (in percentages) of 29 different immune cell populations determined by analysis of RNA-seq data for primary tumors from K7M2 tumor-bearing mice obtained as described in Figure 4C with the online tool ImmuCellAI-mouse. The abundance of each population was normalized by considering 1 to be the total (100%) population abundance. (C) Normalized abundances of natural killer (NK) cells, type 1 dendritic cells (cDC1s), plasmacytoid dendritic cells (pDCs), M1 macrophages, and M2 macrophages. Data are shown as the mean ± SD (n = 3–5). ∗p < 0.05, ∗∗p < 0.01, ∗∗∗p < 0.001, ∗∗∗∗p < 0.0001; one-way ANOVA. (D) Heatmap representing the differential expression and hierarchical clustering of the most significant immunomodulatory genes between treatment groups. NC12, SFV-Gal3-N-C12; LUC, SFV-Luc.
PMC9345771
gr5.jpg
0.470206
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Characterization of the tumor microenvironment of K7M2 tumors after treatment with SFV vectors(A and B) Flow-cytometric analyses of different immune cell populations in primary K7M2 tumors (tibias) (A) and lung metastases (B) on day 3 after treatment with PBS, SFV-Gal3-N-C12 (N-C12), or SFV-Luc (Luc). Data are shown as the number of cells/mg tissue and as the mean ± SD (n = 5). ∗p < 0.05, ∗∗p < 0.01, ∗∗∗p < 0.001; one-way ANOVA. (C) Ratios of CD4+/CD8+ T cells, CD8+ T cells/M2 macrophages, and CD8+/CD4+Foxp3+ T cells in the tumor samples analyzed in (A). Data are shown as the mean ± SD (n = 5). ∗p < 0.05; one-way ANOVA. (D) Gp70 tetramer (Tet+) staining (%) of the CD8+ T cell population (%) and surface expression of Gal3 in the CD8+Tet+ T cell population (MFI) in K7M2 tumors on day 14 after treatment with the indicated vectors. Data are shown as the mean ± SD (n = 4). ∗p < 0.05, ∗∗p < 0.01, ∗∗∗p < 0.001; one-way ANOVA. (E) IFN-γ production in TILs isolated from K7M2 primary tumors on day 14 after treatment with the indicated SFV vectors. IFN-γ levels were measured by ELISA, and IFN-γ spot numbers and IFN-γ mean spot sizes were measured by ELISPOT. Data are shown as the mean ± SD (n = 3). ∗p < 0.05, ∗∗p < 0.01; one-way ANOVA. +, splenocytes plus mitogen; −, only splenocytes; K7M2, only K7M2 cells.
PMC9345771
gr6.jpg
0.464044
f86646fe6ccd44488d7378c80b5d2faf
Analysis of exhaustion markers expressed by tumor-infiltrating lymphocytes in K7M2 tumors after treatment with SFV vectors(A) Expression of PD1, LAG3, or TIM3 (MFI) in CD8+ T cells from K7M2 tumors on day 3 and day 7 after treatment with PBS, SFV-Luc (LUC), or SFV-Gal3-N-C12 (N-C12). Data are shown as the mean ± SD (n = 5, each group). ∗p < 0.05, ∗∗p < 0.01; one-way ANOVA. (B) Pie charts showing the percentage of CD8+ T cells coexpressing the activation/exhaustion markers PD1, LAG3, and TIM3. (C) Same analysis as in (A) performed with tumor-infiltrating CD4+ T cells. Data are shown as the mean ± SD (n = 5, each group). p > 0.05 (not significant); one-way ANOVA. (D) Pie charts showing the percentage of CD4+ T cells coexpressing the activation/exhaustion markers PD1, LAG3, and TIM3.
PMC9345771
gr7.jpg
0.492505
f6707d725e6642c1a2b99eb174335650
Modulation of immune cell populations involved in pulmonary osteosarcoma metastasesFlow-cytometric analyses of CD4+ or CD8+ T cells expressing PD1, Foxp3, CD25, and/or Gal3 in the primary tumors (tibias) (A) and pulmonary metastases (B) of mice bearing K7M2 tumors on day 14 after treatment with PBS, SFV-Gal3-N-C12 (N-C12), or SFV-Luc (Luc). Data are shown as the mean percentage ± SD of the total CD4+ or CD8+ T cells (n = 5). ∗p < 0.05, ∗∗p < 0.01, ∗∗∗p < 0.001; one-way ANOVA.
PMC9345771
gr8.jpg
0.419761
c33c53322bc140b19c3a7aa18a27b896
The imbalance of regulatory T cells and effector T cells promotes the progression of chronic liver diseases and hepatocellular carcinoma. Chronic liver diseases such as alcoholic liver disease and non-alcoholic fatty liver disease induced by factors such as alcohol abuse and high-fat diet, respectively, can induce liver fibrosis, cirrhosis, and even hepatocellular carcinoma. The imbalance of regulatory T cells with T helper 17 cells or CD8 T cells is involved in the pathogenesis of liver inflammation, fibrosis, and cancer progression. ALD: Alcoholic liver disease; HCC: Hepatocellular carcinoma; NAFLD: Non-alcoholic fatty liver disease; Treg: Regulatory T cells; Th: T helper.
PMC9346458
WJG-28-3346-g001.jpg
0.480259
3e8313583ab345f2a8589cf2d849c7d8
The alteration of intrahepatic immunity predicts the prognosis of hepatocellular carcinoma patients. Usually, an increase of regulatory T cells, T helper (Th) 2 cells, and Th17 cells, as well as M2 macrophages is positively associated with hepatocellular carcinoma (HCC) progression in patients, whereas an abundance of CD8 T cells, Th1 T cells, and M1 macrophages is associated with HCC therapy and good prognosis for HCC patients. HCC: Hepatocellular carcinoma; Treg: Regulatory T cells; Th: T helper.
PMC9346458
WJG-28-3346-g002.jpg
0.415387
15f7fc68e9e14888b2ddc88581fa4193
Factors mediated the imbalance of regulatory T cells/effector T cells. Factor such as Hepatitis B virus, gut microbiota, and non-alcoholic fatty liver disease, as well as hepatocellular carcinoma tumor cells, can modulate several important molecules produced in the liver. Alteration of these molecules has been associated with the change of frequency and/or function of regulatory T cells in chronic liver disease, resulting in an imbalance of regulatory T cells/effector T cells. HCC: Hepatocellular carcinoma; HBV: Hepatitis B virus; NAFLD: Non-alcoholic fatty liver disease; Teff: Effector T cells; Treg: Regulatory T cells; GDF: Growth differentiation factor; HIF: Hypoxia-inducible transcription factors; Gal: Galectin; miR: micro ribonucleic acid; TLR: Toll-like receptor; YAP: Yes-associated protein; TGF-β: Transforming growth factor-beta.
PMC9346458
WJG-28-3346-g003.jpg
0.482131
d17f565196dc4b7ea489d42b31f2aeb1
PRISMA (Preferred Reporting Items for Systematic Reviews and Meta-Analyses) flow diagram for identifying articles eligible for inclusion. FHIR: Fast Healthcare Interoperability Resources.
PMC9346559
medinform_v10i7e35724_fig1.jpg
0.42248
1a04f3301f6c4787bcf020e28f81bd9a
Number of publications per year (all: all FHIR publications identified in the databases with the search terms “FHIR” OR “Fast Healthcare Interoperability Resources”; included: studies included in this review). FHIR: Fast Healthcare Interoperability Resources.
PMC9346559
medinform_v10i7e35724_fig2.jpg
0.458627
345f57fa97f643b5a6a2eb2712b1497b
Network of coauthorships. Each point represents an author. Point size and color indicate the number of publications of this author (between 1 and 6). Lines indicate that authors have coauthored at least one paper together. Line thickness represents the number of coauthorships.
PMC9346559
medinform_v10i7e35724_fig3.jpg
0.434755
3e857499398e486f90f253a1677d4965
Number of studies according to research domain.
PMC9346559
medinform_v10i7e35724_fig4.jpg
0.440211
1716aeb128d04d2584127a384e7330f9
Project conceptual framework. EIS: early intervention services; RE-AIM: Reach, Effectiveness, Adoption, Implementation, and Maintenance framework; RLHS: rapid-learning health system.
PMC9346564
resprot_v11i7e37346_fig1.jpg
0.50166
42d96cce8fdb471da054344bcc9d0992
Rapid-learning health system for early intervention for psychosis.
PMC9346564
resprot_v11i7e37346_fig2.jpg
0.462463
49eff84de82e4418b989d652bf41726f
Involvement of stakeholders in our rapid-learning health system for early intervention for psychosis.
PMC9346564
resprot_v11i7e37346_fig3.jpg
0.398476
2606d8da29a94da6b7f73a71a3bbf588
Concern about COVID‐19 (a) and melanoma (b) in the whole cohort and in subgroups that did or did not postpone or miss appointments. The total number of patients in each subgroup was set to 100 %. Reasons for changed appointments (c). The total number of patients with postponed or missed appointments (n = 38) was set to 100 %. aPercentages do not sum up to 100 % because 5 patients provided more than one answer. bOther sickness than a SARS‐CoV‐2 infection. cOther reasons were stated by 7 patients and specified as free text by 4 of them. The first patient postponed his appointment because his wife was sick, the second had another surgery planned, the third did not find the visit necessary and the fourth was afraid of an insufficient standard of hygiene. dOut of 11 appointment changes due to medical provider‐related reasons, 5 occurred in the Vivantes Skin Cancer Center and 6 in external dermatological practices. eReasons for medical‐provider‐related appointment changes could not be recapitulated in 6 cases, among these 3 at the Vivantes Skin Cancer Center and 3 in external dermatological practices.
PMC9348098
DDG-20-962-g001.jpg
0.471406
86de07bacf9d47e19dffe64805bba91a
Recruitment process flowchart of the Mela‐COVID Follow‐up study.
PMC9348098
DDG-20-962-g002.jpg
0.470084
0cc79cf2adb5462caee1c778ad592501
Number of new SARS‐CoV‐2 infections per day between 01 Mar 2020 and 01 May 2021 in Germany. Source: Robert Koch‐Institute, available at: https://www.rki.de/DE/Content/InfAZ/N/Neuartiges_Coronavirus/Daten/Fallzahlen_Kum_Tab.html?fbclid=IwAR0ddnAvxHA‐nN5ElOfQfEDUjFiH7rmeDeS1tYTlsvQ6B04FTScs08S5dpA (accessed 28 Jun 2021). Bars: Data collection periods of the Mela‐COVID and the Mela‐COVID Follow‐up study.
PMC9348098
DDG-20-962-g003.jpg
0.417067
0cb31d54e81a461c8a3724b0f0e2cbfc
Concern about COVID‐19 (a, b) and melanoma (c, d) in five categories (a, c) and on a 0–100 scale (b, d) in the subcohort that participated both in the Mela‐COVID and in the Mela‐COVID Follow‐up study. Participants were significantly more concerned about COVID‐19 after one year of pandemic (Mela‐COVID Follow‐Up) than after its first wave (Mela‐COVID; p < 0.001 both when comparing concern in 5 categories and on a 0–100 scale). Concern about melanoma did not differ significantly at both times. *** p = 0.001.
PMC9348098
DDG-20-962-g004.jpg
0.456959
d1ed1d492b2a4c0ea681c0c931c47a87
Diagnostic plots of the final model for morbidly obese individuals (grey dots) and non-obese individuals (black dots). a Observed versus individual predicted ciprofloxacin concentrations. b Observed versus population predicted ciprofloxacin concentrations. c CWRES versus time after dose. d Conditional weighted residuals versus population predicted concentration. The grey line represents the line of identity and the dashed lines represent the 1.96, − 1.96 interval indicating the range within which 95% of the observations are expected to fall. CWRES conditional weighted residuals
PMC9349153
40262_2022_1130_Fig1_HTML.jpg
0.47881
30cfbbe818da414d81de94497aa2cd26
Concentration-time curves in plasma (top panels) and soft tissue (lower panels) after a two or three times daily IV infusion of 400 mg for a typical non-obese or obese individual based on the empirical extended model derived from data by Hollenstein et al. [8]. IV intravenous, dd daily doses
PMC9349153
40262_2022_1130_Fig2_HTML.jpg
0.426589
9da8f975d56a4c9d82bdb9d9a66e5134
Reflexive PrEP Decision-Making
PMC9350448
10.1177_10497323221092701-fig1.jpg
0.430173
0fae0f13acaf458abc79c35e216c6b5f
Flow diagram of study selection process.
PMC9350608
WJR-14-238-g001.jpg
0.431698
2b674f1f0c5c4715a1b7a26a90e78682
Progress of mean weight in both groups
PMC9350655
JIAPS-27-204-g001.jpg
0.466298
571ee9f8a3804c6385888af4b1c99647
Schematic representations of inorganic (left) and organic (right) linkage isomers.
PMC9350666
d2sc02979k-f1.jpg
0.44944
90310c069d554e97a1e519dab825f65a
Core-level N (1s) XPS spectra for (a) NO2-PDI and (b) ONO-PDI in the powder state.
PMC9350666
d2sc02979k-f2.jpg
0.452308
d0cbb4146dd94113b39ce5eda2bac4c6
FTIR spectra of NO2-PDI (top) and ONO-PDI (bottom) in KBr disks.
PMC9350666
d2sc02979k-f3.jpg
0.417401
e71279e54bf240ec8f34d43d909dff58
Time-dependent laser-irradiated UV-vis absorption spectra of NO2-PDI in (a) acetonitrile and (c) toluene. Time-dependent laser irradiated emission spectra (exc. at 532 nm) of NO2-PDI in (b) acetonitrile and (d) toluene.
PMC9350666
d2sc02979k-f4.jpg
0.450517
8c9f40e7925345a1b57864e41f5f0aa3
(top) fsTA spectra (λex = 532 nm) of NO2-PDI in (a) TOL and (b) ACN showing the excited-state dynamics after photoexcitation at 532 nm. (middle) Evolution associated spectra reconstructed from global analysis of the time vs. wavelength based three-dimensional fsTA spectrograph. (bottom) Relative population profiles of the excited states fitted using kinetic models. (c) (top) nsTA spectra (λex = 532 nm) of NO2-PDI in TOL. (middle) Evolution associated spectra reconstructed from global analysis of the time vs. wavelength based three-dimensional nsTA spectrograph. (bottom) Relative population profile of the excited-state (B) fitted using kinetic models.
PMC9350666
d2sc02979k-f5.jpg
0.43931
e7afa4a18aaa4a73932061ce7ca0ab60
(a) A pictorial illustration presenting a plausible kinetic mechanism explaining the excited-state dynamics and associated photochemistry of NO2-PDI in the polar aprotic solvent acetonitrile and non-polar solvent toluene. Here, the S0 state represents the ground state of NO2-PDI and ONO-PDI, the S1FC state represents the Franck–Condon state of NO2-PDI, and the S1CR(CT) state is a long-lived transient species observed in nsTA measurements, representing the conformationally relaxed singlet excited-state of NO2-PDI having charge-transfer character. (b) Optimized geometries showing the transition from the S1FC state first to the S1CR(CT) state and finally to the six-membered TS through the nitro-aromatic torsion relaxation pathway computed at the CAM-B3LYP/6-311++G(d,p) level (the –R group was replaced by a –H atom to reduce the computational cost and increase clarity).
PMC9350666
d2sc02979k-f6.jpg
0.519361
39eba94dac6b459087c41533f3b5030e
(A) The structure of tyrosol; (B) the structure of salidroside.
PMC9351785
jfda-23-03-359f1.jpg
0.475353
1e6e3e51eabb4d068b7ca029f68d82a4
Original and Vietnamese versions of the Group Rule image.Reprinted from the RAP-A and Happy House Participant Workbooks under a CC BY license, with permission from Astrid Wurfl, original copyright 2021.
PMC9352022
pone.0271959.g001.jpg
0.504021
a7a86d4d1acd4539b4fa80c74a0fd830
Original and Vietnamese versions of the Relaxation Brick image.Reprinted from the RAP-A and Happy House Participant Workbooks under a CC BY license, with permission from Astrid Wurfl, original copyright 2021.
PMC9352022
pone.0271959.g002.jpg
0.481411
038a70d4baaa4a34af302ee2422f34a3
The original and Vietnamese actresses in the Saskia video.Reprinted from the RAP-A and Happy House videos under a CC BY license, with permission from Astrid Wurfl, original copyright 2021.
PMC9352022
pone.0271959.g003.jpg
0.476504
f59b9218889e44fd9179b1046e462f9b
Molecular networking analysis of the CH2Cl2-soluble fraction of C. orchioides. (A) Spectrum match of the node of molecular networking with GNPS library. (B) Structures of top ranked NAP candidates using GNPS and SUPNAT library. (C) Automatic classification and visualization of each cluster by the MolNetEnhancer. The chemical class of the largest (the cluster filled with red color) clusters were revealed as triterpenoids. The singleton node was excluded in this figure.
PMC9352156
ao2c03243_0001.jpg
0.536998
5ce503602384436ea42b9e3bab7c08d2
Key HMBC, COSY, and NOESY correlations of compound 1.
PMC9352156
ao2c03243_0002.jpg
0.574304
81976d76f6774fa68e5ed5cdfa41adf8
X-ray ORTEP plot for the molecular structure of compound 1.
PMC9352156
ao2c03243_0003.jpg
0.493949
5967bb2610de492ca1f930f4c1116fda
Key HMBC, COSY, and NOESY correlations of compound 2.
PMC9352156
ao2c03243_0004.jpg
0.546428
66c1b4a8c1504cdcbafea45c31b0b89f
X-ray ORTEP plot for the molecular structure of compound 2.
PMC9352156
ao2c03243_0005.jpg
0.480699
721503557246452489f7e73cfbbff30c
Key HMBC, COSY, and NOESY correlations of compound 3.
PMC9352156
ao2c03243_0006.jpg
0.619415
ab23d29a9f7c41f080318410f908a22f
X-ray ORTEP plot for the molecular structure of compound 3.
PMC9352156
ao2c03243_0007.jpg
0.445473
4ecad514eb3c4dff95cf73ca13e7705b
3D model simulation after MM2 minimization (minimum RMS gradient = 0.01) for the comparison of relative configuration of compound 4. (A) Comparison of 3D computational models of (20S*,22R*)-4 and (20S*,22S*)-4 and 3J values upon dihedral angle. (B) Comparison of (20S*,22R*,24S*)-4 and (20S*,22R*,24R*)-4 and calculated interproton distances.
PMC9352156
ao2c03243_0008.jpg
0.530284
5b07a36952f64f9e902a174b032747b2
3D computational model for the compound 5 and key NOESY correlation.
PMC9352156
ao2c03243_0009.jpg
0.436725
751cc1f3a5ca41af8e0be0ee20be2366
Annotation of compounds 1–6 on the triterpenoid clusters.
PMC9352156
ao2c03243_0010.jpg
0.589983
ed90f47733774b7a8b3a3fbc8f14f467
1H NMR spectra of (a) chitosan and (b) CST in CF3COOH/D2O.
PMC9352254
ao2c02776_0002.jpg
0.516135
528347ef290d4b7f82cbeada0aca6aa9
UV–vis spectra of CST, chitosan, thymol, and chitosan mixed with 0.05% w/v thymol in 0.1 M HCl solution.
PMC9352254
ao2c02776_0003.jpg
0.481141
9c5aa2b6023c4c07a4d1f59f1434d11e
Visual observation and absorption spectra of CST coated on gold nanoparticles with various concentrations of CST (a) 0.006%w/v, (b) 0.008%w/v, (c) 0.010%w/v, and (d) 0.020%w/v and CST as the control on the synthesis step.
PMC9352254
ao2c02776_0004.jpg
0.514413
5e579e9471184e61bfb880f5489d017a
XRD pattern of (a) chitosan, (b) CST, (c) CST coated on gold nanoparticles, and (d) thymol.
PMC9352254
ao2c02776_0005.jpg
0.432084
125ce0be6934452ead4f9fb96f4f58fb
TEM images and size distribution of CST coated on gold nanoparticles at a CST concentration of (a) 0.006% w/v, (b) 0.008% w/v, (c) 0.01% w/v, and (d) 0.02% w/v.
PMC9352254
ao2c02776_0006.jpg
0.471403
5abbbadb2f37461d9c4263e2becbd2c2
Effect of (a) pH, (b) ionic strength, and (c) time on the stability of CST coated on gold nanoparticles.
PMC9352254
ao2c02776_0007.jpg
0.523933
dbfbb432f8934e87a7bdf7f16e8f87ed
Bacterial inhibition photographs of chitosan, CST, and CST coated on gold nanoparticles and control against using the agar well diffusion method (a) S. mutans and (b) S. sobrinus.
PMC9352254
ao2c02776_0008.jpg
0.456483
354b4d26d2e0401fb1f9cf4bf01ac845
Schematic Illustration of the Synthesis of (a) CST and (b) CST Coated on the Gold Nanoparticle Surface
PMC9352254
ao2c02776_0009.jpg
0.5175
5fcad26a3b7d4e61ad2c11e10f4e7ec2
Plasma lipidome data visualization of Tuberculosis patients (N = 35) and Control (N = 37) group. (a) Principal components analysis 3D score plot of the two group in the positive ion mode. (b) Heatmap of all lipidome features between two group in the positive ion mode. (c) Principal components analysis 3D score plot of the two group in the negative ion mode. (d) Heatmap of all lipidome features between the two group in the negative ion mode. C control group, T Tuberculosis group.
PMC9352691
41598_2022_17521_Fig1_HTML.jpg
0.440946
c8d0c8b701ab4b25b5d5ec3c61d75f34
Partial least squares-discriminant analysis (PLS-DA) score plots of Tuberculosis patients and controls plasma lipidome. (a) PLS-DA 3D score plot of the two group in the positive ion mode. (b) PLS-DA 3D score plot of the two group in the negative ion mode. C control group, T Tuberculosis group.
PMC9352691
41598_2022_17521_Fig2_HTML.jpg
0.399863
7b2b4bd3617f4290bd8dc68d2f953033
Lipid biomarkers multivariate and correlation analysis. (a) Random Forest predictive model of the lipid biomarkers. (b) Linear Support Vector Machine predictive model of the lipid biomarkers. (c) Correlation of the lipid biomarkers in Tuberculosis group (d) Correlation of the lipid biomarkers Control group. Var variable, AUC area under the curve, CI confidence interval, CAR acylcarnitine, Cer ceramide, Hex2Cer hexosylceramide, LPC lysophosphatidylcholines, LPC (O-) Ether-linked lysophosphatidylcholines, PC phosphatidylcholine, PC (O-) Ether-linked phosphatidylcholine, LPE lysophosphatidylethanolamines, LPE (O-) Ether-linked lysophosphatidylethanolamines, PE phosphatidylethanolamine, PE (O-) Ether-linked phosphatidylethanolamine, PI phosphatidylinositol, NAE N-acetyl ethanolamine, DG diacylglycerol, TG triacylglycerol, FA free fatty acid.
PMC9352691
41598_2022_17521_Fig3_HTML.jpg
0.430753
20fb4e4482d349c680f3baeb394a34fe
Lipid ontology enrichment and lipid-gene association network analysis. (a) Lipid ontology (LION) PCA-heatmap of Tuberculosis and Control group. (b) Bubble plot of lipid-gene association pathways. C control group, T Tuberculosis group, PC phosphatidylcholine, TG triacylglycerol, LION Lipid ontology.
PMC9352691
41598_2022_17521_Fig4_HTML.jpg
0.413732
c3f312198df04029885b69d0de23c616
Tuberculosis (TB) and non-TB classification in three cohort by lipid-genes biomarkers using Random Forest predictive model. (a) Model performance (AUC = 0.919) of TB versus Control classification in GSE107991 dataset. (b) Model performance (AUC = 0.884) of TB versus latent tuberculosis infection (LTBI) classification in GSE107991 dataset. (c) Model performance (AUC = 0.829) of TB versus non-TB classification in E-MTAB-8290 dataset. (d) Model performance (AUC = 0.958) of TB versus Control classification in GSE101705 dataset. Var variable, AUC area under the curve, CI confidence interval, TB Tuberculosis, LTBI Latent tuberculosis infection.
PMC9352691
41598_2022_17521_Fig5_HTML.jpg
0.396831
0da09ef3bc5d48ffa8226c10ff5df75e
Top: Point of interest (POI) distribution (input). Bottom: Incidence distribution (Output).
PMC9353319
gr10_lrg.jpg
0.454052
474e17c448c349c3ae5c08f6c19e8e3f
Top: Result comparison of the A_training set in different periods. Bottom: the distribution of the training and the testing dataset.
PMC9353319
gr11_lrg.jpg
0.467763
8e35447e1b874d47aad2e9680440025d
Generator loss (LOSS_G) and Discriminator loss (LOSS_D) during training A and training B.
PMC9353319
gr12_lrg.jpg
0.430576
e622907dfc6d4a5ba7fbe7288c631655
Training and testing image pairs of training A and training B.
PMC9353319
gr13_lrg.jpg