patrickbdevaney/mia9 · Datasets at Hugging Face

text stringlengths 0 6.44k
Robblee, M., Barber, T., Carlson, P., Durako, M., Fourqurean, J., Muehlstein, L.,
et al. (1991). Mass mortality of the tropical seagrass Thalassia testudinum in
Florida Bay (USA). Mar. Ecol. Prog. Ser. 71, 297–299. doi: 10.3354/meps071297
Roelfsema, C. M., Phinn, S. R., Udy, N., and Maxwell, P. (2009). An integrated
field and remote sensing approach for mapping seagrass cover, Moreton Bay,
Australia. J. Spat. Sci. 54, 45–62. doi: 10.1080/14498596.2009.9635166
Rudnick, D. T., Ortner, P. B., Browder, J. A., and Davis, S. M. (2005). A conceptual
ecological model of Florida Bay. Wetlands 25, 870–883.
Santillan, E., Seshan, H., Constancias, F., Drautz-Moses, D. I., and Wuertz, S.
(2019). Frequency of disturbance alters diversity, function, and underlying
assembly mechanisms of complex bacterial communities. NPJ Biofilms
Microbiomes 5:8. doi: 10.1038/s41522-019-0079-4
Santos, R. O., and Lirman, D. (2012). Using habitat suitability models to predict
changes in seagrass distribution caused by water management practices. Can. J.
Fish. Aquat. Sci. 69, 1380–1388. doi: 10.1139/f2012-018
Scheffer, M., Carpenter, S., Foley, J. A., Folke, C., and Walker, B. (2001).
Catastrophic shifts in ecosystems. Nature 413, 591–596. doi: 10.1038/35098000
Sherwood, E. T., Greening, H. S., Johansson, J. O. R., Kaufman, K., and Raulerson,
G. E. (2017). Tampa Bay (Florida, USA): documenting seagrass recovery since
the 1980’s and reviewing the benefits. Southeast. Geographer. 57, 294–319.
Short, F. T., and Neckles, H. A. (1999). The effects of global climate change on
seagrasses. Aquat. Bot. 63, 169–196. doi: 10.1016/S0304-3770(98)00117-X
Standish, R. J., Hobbs, R. J., Mayfield, M. M., Bestelmeyer, B. T., Suding, K. N.,
Battaglia, L. L., et al. (2014). Resilience in ecology: abstraction, distraction, or
where the action is? Biol. Conserv. 177, 43–51. doi: 10.1016/j.biocon.2014.06.
008
Stipek, C., Santos, R., Babcock, E., and Lirman, D. (2020). Modelling the resilience
of seagrass communities exposed to pulsed freshwater discharges: a seascape
approach. PLoS One 15:e0229147. doi: 10.1371/journal.pone.0229147
Stumpf, R. P., Frayer, M. L., Durako, M. J., and Brock, J. C. (1999). Variations in
water clarity and bottom albedo in Florida Bay from 1985 to 1997. Estuaries
22:431. doi: 10.2307/1353209
Unsworth, R. K. F., Collier, C. J., Waycott, M., Mckenzie, L. J., and CullenUnsworth, L. C. (2015). A framework for the resilience of seagrass ecosystems.
Mar. Pollut. Bull. 100, 34–46. doi: 10.1016/j.marpolbul.2015.08.016
Unsworth, R. K. F., Nordlund, L. M., and Cullen−Unsworth, L. C. (2019). Seagrass
meadows support global fisheries production. Conserv. Lett. 12:e12566. doi:
10.1111/conl.12566
Valentine, J. F., and Duffy, J. E. (2006). “The central role of grazing in seagrass
ecology,” in Seagrasses: Biology, Ecology and Conservation, eds A. W. D. Larkum,
R. J. Orth, and C. M. Duarte (Dordrecht: Springer Netherlands), 463–501.
van der Heide, T., van Nes, E. H., Geerling, G. W., Smolders, A. J. P., Bouma,
T. J., and van Katwijk, M. M. (2007). Positive feedbacks in seagrass ecosystems:
implications for success in conservation and restoration. Ecosystems 10, 1311–
1322. doi: 10.1007/s10021-007-9099-7
van Katwijk, M. M., Hermus, D. C. R., de Jong, D. J., Asmus, R. M., and de
Jonge, V. N. (2000). Habitat suitability of the Wadden Sea for restoration of
Zostera marina beds. Helgol. Mar. Res. 54, 117–128. doi: 10.1007/s10152005
0010
van Katwijk, M. M., and Hermus, D. C. R. (2000). Effects of water dynamics
on Zostera marina: transplantation experiments in the intertidal Dutch
Wadden Sea. Mar. Ecol. Prog. Ser. 208, 107–118. doi: 10.3354/meps20
8107
Wahl, T. J. (2019). Temporal Variability of DIN, Chlorophyll, and DOC in Florida
Bay following Hurricane Irma. Ph.D. thesis. Chapel Hill, NC: University of
North Carolina.
Wang, X., Xiao, X., Zou, Z., Chen, B., Ma, J., Dong, J., et al. (2020). Tracking annual
changes of coastal tidal flats in China during 1986–2016 through analyses of
landsat images with Google earth engine. Remote Sens. Environ. 238:110987.
doi: 10.1016/j.rse.2018.11.030
Waycott, M., Duarte, C. M., Carruthers, T. J. B., Orth, R. J., Dennison, W. C.,
Olyarnik, S., et al. (2009). Accelerating loss of seagrasses across the globe
threatens coastal ecosystems. Proc. Natl. Acad. Sci. U.S.A. 106, 12377–12381.
doi: 10.1073/pnas.0905620106
Wilson, S. S., Furman, B. T., Hall, M. O., and Fourqurean, J. W. (2020). Assessment
of hurricane IRMA impacts on South Florida seagrass communities using longterm monitoring programs. Estuar. Coasts 43, 1119–1132. doi: 10.1007/s12237-
019-00623-0
Wood, S. N. (2017). Generalized Additive Models: An Introduction with R, 2nd Edn.
London: Chapman and Hall.
York, P. H., Carter, A. B., Chartrand, K., Sankey, T., Wells, L., and Rasheed, M. A.
(2015). Dynamics of a deep-water seagrass population on the great Barrier Reef:
annual occurrence and response to a major dredging program. Sci. Rep. 5:13167.
doi: 10.1038/srep13167
Zeileis, A., Kleiber, C., Krämer, W., and Hornik, K. (2003). Testing and
dating of structural changes in practice. Comput. Stat. Data Anal. 44,
109–123.
Zeileis, A., Leisch, F., Hornik, K., and Kleiber, C. (2002). Strucchange: an r package
for testing for structural change in linear regression models. J. Stat. Softw. 7,
1–38.
Zhang, K., Dong, X., Liu, Z., Gao, W., Hu, Z., and Wu, G. (2019). Mapping
tidal flats with landsat 8 images and google earth engine: a case study of the
china’s eastern coastal zone circa 2015. Remote Sens. 11:924. doi: 10.3390/rs1108
0924
Zieman, J. C. (1982). The Ecology of the Seagrasses of South Florida: A Community
Profile. Washington, D.C: Fish and Wildlife Service.
Zieman, J. C., Fourqurean, J. W., and Frankovich, T. A. (1999). Seagrass
die-off in Florida Bay: long-term trends in abundance and growth of
turtle grass,Thalassia testudinum. Estuaries 22, 460–470. doi: 10.2307/1353
211
Zimmerman, R. C. (2020). Scaling up: predicting the impacts of climate change
on seagrass ecosystems. Estuar. Coasts 44, 558–576. doi: 10.1007/s12237-020-
00837-7
Conflict of Interest: The authors declare that the research was conducted in the
absence of any commercial or financial relationships that could be construed as a
potential conflict of interest.
Publisher’s Note: All claims expressed in this article are solely those of the authors
and do not necessarily represent those of their affiliated organizations, or those of
the publisher, the editors and the reviewers. Any product that may be evaluated in
this article, or claim that may be made by its manufacturer, is not guaranteed or
endorsed by the publisher.
Copyright © 2021 Rodemann, James, Santos, Furman, Fratto, Bautista,

Robblee, M., Barber, T., Carlson, P., Durako, M., Fourqurean, J., Muehlstein, L.,

et al. (1991). Mass mortality of the tropical seagrass Thalassia testudinum in

Florida Bay (USA). Mar. Ecol. Prog. Ser. 71, 297–299. doi: 10.3354/meps071297

Roelfsema, C. M., Phinn, S. R., Udy, N., and Maxwell, P. (2009). An integrated

field and remote sensing approach for mapping seagrass cover, Moreton Bay,

Australia. J. Spat. Sci. 54, 45–62. doi: 10.1080/14498596.2009.9635166

Rudnick, D. T., Ortner, P. B., Browder, J. A., and Davis, S. M. (2005). A conceptual

ecological model of Florida Bay. Wetlands 25, 870–883.

Santillan, E., Seshan, H., Constancias, F., Drautz-Moses, D. I., and Wuertz, S.

(2019). Frequency of disturbance alters diversity, function, and underlying

assembly mechanisms of complex bacterial communities. NPJ Biofilms

Microbiomes 5:8. doi: 10.1038/s41522-019-0079-4

Santos, R. O., and Lirman, D. (2012). Using habitat suitability models to predict

changes in seagrass distribution caused by water management practices. Can. J.

Fish. Aquat. Sci. 69, 1380–1388. doi: 10.1139/f2012-018

Scheffer, M., Carpenter, S., Foley, J. A., Folke, C., and Walker, B. (2001).

Catastrophic shifts in ecosystems. Nature 413, 591–596. doi: 10.1038/35098000

Sherwood, E. T., Greening, H. S., Johansson, J. O. R., Kaufman, K., and Raulerson,

G. E. (2017). Tampa Bay (Florida, USA): documenting seagrass recovery since

the 1980’s and reviewing the benefits. Southeast. Geographer. 57, 294–319.

Short, F. T., and Neckles, H. A. (1999). The effects of global climate change on

seagrasses. Aquat. Bot. 63, 169–196. doi: 10.1016/S0304-3770(98)00117-X

Standish, R. J., Hobbs, R. J., Mayfield, M. M., Bestelmeyer, B. T., Suding, K. N.,

Battaglia, L. L., et al. (2014). Resilience in ecology: abstraction, distraction, or

where the action is? Biol. Conserv. 177, 43–51. doi: 10.1016/j.biocon.2014.06.

008

Stipek, C., Santos, R., Babcock, E., and Lirman, D. (2020). Modelling the resilience

of seagrass communities exposed to pulsed freshwater discharges: a seascape

approach. PLoS One 15:e0229147. doi: 10.1371/journal.pone.0229147

Stumpf, R. P., Frayer, M. L., Durako, M. J., and Brock, J. C. (1999). Variations in

water clarity and bottom albedo in Florida Bay from 1985 to 1997. Estuaries

22:431. doi: 10.2307/1353209

Unsworth, R. K. F., Collier, C. J., Waycott, M., Mckenzie, L. J., and CullenUnsworth, L. C. (2015). A framework for the resilience of seagrass ecosystems.

Mar. Pollut. Bull. 100, 34–46. doi: 10.1016/j.marpolbul.2015.08.016

Unsworth, R. K. F., Nordlund, L. M., and Cullen−Unsworth, L. C. (2019). Seagrass

meadows support global fisheries production. Conserv. Lett. 12:e12566. doi:

10.1111/conl.12566

Valentine, J. F., and Duffy, J. E. (2006). “The central role of grazing in seagrass

ecology,” in Seagrasses: Biology, Ecology and Conservation, eds A. W. D. Larkum,

R. J. Orth, and C. M. Duarte (Dordrecht: Springer Netherlands), 463–501.

van der Heide, T., van Nes, E. H., Geerling, G. W., Smolders, A. J. P., Bouma,

T. J., and van Katwijk, M. M. (2007). Positive feedbacks in seagrass ecosystems:

implications for success in conservation and restoration. Ecosystems 10, 1311–

1322. doi: 10.1007/s10021-007-9099-7

van Katwijk, M. M., Hermus, D. C. R., de Jong, D. J., Asmus, R. M., and de

Jonge, V. N. (2000). Habitat suitability of the Wadden Sea for restoration of

Zostera marina beds. Helgol. Mar. Res. 54, 117–128. doi: 10.1007/s10152005

0010

van Katwijk, M. M., and Hermus, D. C. R. (2000). Effects of water dynamics

on Zostera marina: transplantation experiments in the intertidal Dutch

Wadden Sea. Mar. Ecol. Prog. Ser. 208, 107–118. doi: 10.3354/meps20

8107

Wahl, T. J. (2019). Temporal Variability of DIN, Chlorophyll, and DOC in Florida

Bay following Hurricane Irma. Ph.D. thesis. Chapel Hill, NC: University of

North Carolina.

Wang, X., Xiao, X., Zou, Z., Chen, B., Ma, J., Dong, J., et al. (2020). Tracking annual

changes of coastal tidal flats in China during 1986–2016 through analyses of

landsat images with Google earth engine. Remote Sens. Environ. 238:110987.

doi: 10.1016/j.rse.2018.11.030

Waycott, M., Duarte, C. M., Carruthers, T. J. B., Orth, R. J., Dennison, W. C.,

Olyarnik, S., et al. (2009). Accelerating loss of seagrasses across the globe

threatens coastal ecosystems. Proc. Natl. Acad. Sci. U.S.A. 106, 12377–12381.

doi: 10.1073/pnas.0905620106

Wilson, S. S., Furman, B. T., Hall, M. O., and Fourqurean, J. W. (2020). Assessment

of hurricane IRMA impacts on South Florida seagrass communities using longterm monitoring programs. Estuar. Coasts 43, 1119–1132. doi: 10.1007/s12237-

019-00623-0

Wood, S. N. (2017). Generalized Additive Models: An Introduction with R, 2nd Edn.

London: Chapman and Hall.

York, P. H., Carter, A. B., Chartrand, K., Sankey, T., Wells, L., and Rasheed, M. A.

(2015). Dynamics of a deep-water seagrass population on the great Barrier Reef:

annual occurrence and response to a major dredging program. Sci. Rep. 5:13167.

doi: 10.1038/srep13167

Zeileis, A., Kleiber, C., Krämer, W., and Hornik, K. (2003). Testing and

dating of structural changes in practice. Comput. Stat. Data Anal. 44,

109–123.

Zeileis, A., Leisch, F., Hornik, K., and Kleiber, C. (2002). Strucchange: an r package

for testing for structural change in linear regression models. J. Stat. Softw. 7,

1–38.

Zhang, K., Dong, X., Liu, Z., Gao, W., Hu, Z., and Wu, G. (2019). Mapping

tidal flats with landsat 8 images and google earth engine: a case study of the

china’s eastern coastal zone circa 2015. Remote Sens. 11:924. doi: 10.3390/rs1108

0924

Zieman, J. C. (1982). The Ecology of the Seagrasses of South Florida: A Community

Profile. Washington, D.C: Fish and Wildlife Service.

Zieman, J. C., Fourqurean, J. W., and Frankovich, T. A. (1999). Seagrass

die-off in Florida Bay: long-term trends in abundance and growth of

turtle grass,Thalassia testudinum. Estuaries 22, 460–470. doi: 10.2307/1353

211

Zimmerman, R. C. (2020). Scaling up: predicting the impacts of climate change

on seagrass ecosystems. Estuar. Coasts 44, 558–576. doi: 10.1007/s12237-020-

00837-7

Conflict of Interest: The authors declare that the research was conducted in the

absence of any commercial or financial relationships that could be construed as a

potential conflict of interest.

Publisher’s Note: All claims expressed in this article are solely those of the authors

and do not necessarily represent those of their affiliated organizations, or those of

the publisher, the editors and the reviewers. Any product that may be evaluated in

this article, or claim that may be made by its manufacturer, is not guaranteed or

endorsed by the publisher.