app.py

from fastapi import FastAPI
import os
import pymupdf  # PyMuPDF
from pptx import Presentation
from sentence_transformers import SentenceTransformer
import torch
from transformers import CLIPProcessor, CLIPModel
from PIL import Image
import chromadb
import numpy as np
from sklearn.decomposition import PCA

app = FastAPI()

# Initialize ChromaDB
client = chromadb.PersistentClient(path="/data/chroma_db")
collection = client.get_or_create_collection(name="knowledge_base")

# File Paths
pdf_file = "Sutures and Suturing techniques.pdf"
pptx_file = "impalnt 1.pptx"

# Initialize Embedding Models
text_model = SentenceTransformer('all-MiniLM-L6-v2')
model = CLIPModel.from_pretrained("openai/clip-vit-base-patch32")
processor = CLIPProcessor.from_pretrained("openai/clip-vit-base-patch32")

# Image Storage Folder
IMAGE_FOLDER = "/data/extracted_images"
os.makedirs(IMAGE_FOLDER, exist_ok=True)

# Extract Text from PDF
def extract_text_from_pdf(pdf_path):
    try:
        doc = pymupdf.open(pdf_path)
        text = " ".join(page.get_text() for page in doc)
        return text.strip() if text else None
    except Exception as e:
        print(f"Error extracting text from PDF: {e}")
        return None

# Extract Text from PPTX
def extract_text_from_pptx(pptx_path):
    try:
        prs = Presentation(pptx_path)
        text = " ".join(
            shape.text for slide in prs.slides for shape in slide.shapes if hasattr(shape, "text")
        )
        return text.strip() if text else None
    except Exception as e:
        print(f"Error extracting text from PPTX: {e}")
        return None

# Extract Images from PDF
def extract_images_from_pdf(pdf_path):
    try:
        doc = pymupdf.open(pdf_path)
        images = []
        for i, page in enumerate(doc):
            for img_index, img in enumerate(page.get_images(full=True)):
                xref = img[0]
                image = doc.extract_image(xref)
                img_path = f"{IMAGE_FOLDER}/pdf_image_{i}_{img_index}.{image['ext']}"
                with open(img_path, "wb") as f:
                    f.write(image["image"])
                images.append(img_path)
        return images
    except Exception as e:
        print(f"Error extracting images from PDF: {e}")
        return []

# Extract Images from PPTX
def extract_images_from_pptx(pptx_path):
    try:
        images = []
        prs = Presentation(pptx_path)
        for i, slide in enumerate(prs.slides):
            for shape in slide.shapes:
                if shape.shape_type == 13:
                    img_path = f"{IMAGE_FOLDER}/pptx_image_{i}.{shape.image.ext}"
                    with open(img_path, "wb") as f:
                        f.write(shape.image.blob)
                    images.append(img_path)
        return images
    except Exception as e:
        print(f"Error extracting images from PPTX: {e}")
        return []

# Convert Text to Embeddings
def get_text_embedding(text):
    return text_model.encode(text).tolist()

# Extract Image Embeddings and Reduce to 384 Dimensions
def get_image_embedding(image_path):
    try:
        image = Image.open(image_path)
        inputs = processor(images=image, return_tensors="pt")
        with torch.no_grad():
            image_embedding = model.get_image_features(**inputs).numpy().flatten()
        
        # Ensure embedding is 384-dimensional
        if len(image_embedding) != 384:
            pca = PCA(n_components=384)
            image_embedding = pca.fit_transform(image_embedding.reshape(1, -1)).flatten()
        
        return image_embedding.tolist()
    except Exception as e:
        print(f"Error generating image embedding: {e}")
        return None

# Store Data in ChromaDB
def store_data(texts, image_paths):
    for i, text in enumerate(texts):
        if text:
            text_embedding = get_text_embedding(text)
            if len(text_embedding) == 384:
                collection.add(ids=[f"text_{i}"], embeddings=[text_embedding], documents=[text])
    
    all_embeddings = [get_image_embedding(img_path) for img_path in image_paths if get_image_embedding(img_path) is not None]
    
    if all_embeddings:
        all_embeddings = np.array(all_embeddings)
        
        # Apply PCA only if necessary
        if all_embeddings.shape[1] != 384:
            pca = PCA(n_components=384)
            all_embeddings = pca.fit_transform(all_embeddings)
        
        for j, img_path in enumerate(image_paths):
            collection.add(ids=[f"image_{j}"], embeddings=[all_embeddings[j].tolist()], documents=[img_path])
    
    print("Data stored successfully!")

# Process and Store from Files
def process_and_store(pdf_path=None, pptx_path=None):
    texts, images = [], []
    if pdf_path:
        pdf_text = extract_text_from_pdf(pdf_path)
        if pdf_text:
            texts.append(pdf_text)
        images.extend(extract_images_from_pdf(pdf_path))
    if pptx_path:
        pptx_text = extract_text_from_pptx(pptx_path)
        if pptx_text:
            texts.append(pptx_text)
        images.extend(extract_images_from_pptx(pptx_path))
    store_data(texts, images)



# FastAPI Endpoints
@app.get("/")
def greet_json():
    # Run Data Processing
    process_and_store(pdf_path=pdf_file, pptx_path=pptx_file)
    return {"Document store": "created!"}

@app.get("/retrieval")
def retrieval(query: str):
    try:
        query_embedding = get_text_embedding(query)
        results = collection.query(query_embeddings=[query_embedding], n_results=5)
        return {"results": results.get("documents", [])}
    except Exception as e:
        return {"error": str(e)}