id
stringlengths
15
19
document_id
stringlengths
15
19
passages
list
entities
list
events
list
coreferences
list
relations
list
split_0_train_29400
split_0_train_29400
[ { "id": "split_0_train_29400_passage", "type": "progene_text", "text": [ "IV. combined sclerosis and resorption of the skull base ( 6 cases , 2 group I lesions and 4 group II lesions ) ." ], "offsets": [ [ 0, 112 ] ] } ]
[]
[]
[]
[]
split_0_train_29401
split_0_train_29401
[ { "id": "split_0_train_29401_passage", "type": "progene_text", "text": [ "Involvement of the intracranial structures embraced the cavernous sinus ( n = 12 ; group II lesions ) , temporal lobe ( n = 11 ; 5 group I lesions and 6 group II lesions ) , and pituitary ( n = 2 , group II lesions ) ." ], "offsets": [ [ 0, 218 ] ] } ]
[]
[]
[]
[]
split_0_train_29402
split_0_train_29402
[ { "id": "split_0_train_29402_passage", "type": "progene_text", "text": [ "CT demonstrated the following central skull base structures were eroded : greater wing of sphenoid bone ( n = 34 ) , sphenoid body ( n = 22 ) , sphenoid process ( n = 23 ) , petrous bone ( n = 15 ) , and articular fossa of the temporal bone ( n = 8 ) ." ], "offsets": [ [ 0, 252 ] ] } ]
[]
[]
[]
[]
split_0_train_29403
split_0_train_29403
[ { "id": "split_0_train_29403_passage", "type": "progene_text", "text": [ "CONCLUSION :" ], "offsets": [ [ 0, 12 ] ] } ]
[]
[]
[]
[]
split_0_train_29404
split_0_train_29404
[ { "id": "split_0_train_29404_passage", "type": "progene_text", "text": [ "Osseous lesions originating from the central skull base have various CT manifestations ." ], "offsets": [ [ 0, 88 ] ] } ]
[]
[]
[]
[]
split_0_train_29405
split_0_train_29405
[ { "id": "split_0_train_29405_passage", "type": "progene_text", "text": [ "The cortical resorption of the central skull base may be regarded as a main pattern of bone erosion caused by primary maxillofacial neoplasms , and most of them have lesions involve the greater wing of sphenoid bone through the deeper maxillofacial spaces , such as the infratemporal , pterygopalatine and parapharyngeal spaces ." ], "offsets": [ [ 0, 329 ] ] } ]
[]
[]
[]
[]
split_0_train_29406
split_0_train_29406
[ { "id": "split_0_train_29406_passage", "type": "progene_text", "text": [ "The ankyrin - B C - terminal domain determines activity of ankyrin-B / G chimeras in rescue of abnormal inositol 1,4,5-trisphosphate and ryanodine receptor distribution in ankyrin-B ( -/- ) neonatal cardiomyocytes ." ], "offsets": [ [ 0, 215 ] ] } ]
[ { "id": "split_0_train_47550_entity", "type": "progene_text", "text": [ "ankyrin - B" ], "offsets": [ [ 4, 15 ] ], "normalized": [] }, { "id": "split_0_train_47551_entity", "type": "progene_text", "text": [ "ankyrin-B / G" ], "offsets": [ [ 59, 72 ] ], "normalized": [] }, { "id": "split_0_train_47552_entity", "type": "progene_text", "text": [ "inositol 1,4,5-trisphosphate and ryanodine receptor" ], "offsets": [ [ 104, 155 ] ], "normalized": [] }, { "id": "split_0_train_47553_entity", "type": "progene_text", "text": [ "ankyrin-B" ], "offsets": [ [ 172, 181 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29407
split_0_train_29407
[ { "id": "split_0_train_29407_passage", "type": "progene_text", "text": [ "Ankyrins are a closely related family of membrane adaptor proteins that are believed to participate in targeting diverse membrane proteins to specialized domains in the plasma membrane and endoplasmic reticulum ." ], "offsets": [ [ 0, 212 ] ] } ]
[ { "id": "split_0_train_47554_entity", "type": "progene_text", "text": [ "Ankyrins" ], "offsets": [ [ 0, 8 ] ], "normalized": [] }, { "id": "split_0_train_47555_entity", "type": "progene_text", "text": [ "adaptor proteins" ], "offsets": [ [ 50, 66 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29408
split_0_train_29408
[ { "id": "split_0_train_29408_passage", "type": "progene_text", "text": [ "This study addresses the question of how individual ankyrin isoforms achieve functional specificity when co - expressed in the same cell ." ], "offsets": [ [ 0, 138 ] ] } ]
[ { "id": "split_0_train_47556_entity", "type": "progene_text", "text": [ "ankyrin" ], "offsets": [ [ 52, 59 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29409
split_0_train_29409
[ { "id": "split_0_train_29409_passage", "type": "progene_text", "text": [ "Cardiomyocytes from ankyrin-B ( -/- ) mice display mis - localization of inositol 1,4,5-trisphosphate receptors and ryanodine receptors along with reduced contraction rates that can be rescued by expression of green fluorescent protein ( GFP ) - ankyrin-B but not GFP - ankyrin-G ." ], "offsets": [ [ 0, 281 ] ] } ]
[ { "id": "split_0_train_47557_entity", "type": "progene_text", "text": [ "ankyrin-B" ], "offsets": [ [ 20, 29 ] ], "normalized": [] }, { "id": "split_0_train_47558_entity", "type": "progene_text", "text": [ "inositol 1,4,5-trisphosphate receptors" ], "offsets": [ [ 73, 111 ] ], "normalized": [] }, { "id": "split_0_train_47559_entity", "type": "progene_text", "text": [ "ryanodine receptors" ], "offsets": [ [ 116, 135 ] ], "normalized": [] }, { "id": "split_0_train_47560_entity", "type": "progene_text", "text": [ "green fluorescent protein" ], "offsets": [ [ 210, 235 ] ], "normalized": [] }, { "id": "split_0_train_47561_entity", "type": "progene_text", "text": [ "GFP" ], "offsets": [ [ 238, 241 ] ], "normalized": [] }, { "id": "split_0_train_47562_entity", "type": "progene_text", "text": [ "ankyrin-B" ], "offsets": [ [ 246, 255 ] ], "normalized": [] }, { "id": "split_0_train_47563_entity", "type": "progene_text", "text": [ "GFP" ], "offsets": [ [ 264, 267 ] ], "normalized": [] }, { "id": "split_0_train_47564_entity", "type": "progene_text", "text": [ "ankyrin-G" ], "offsets": [ [ 270, 279 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29410
split_0_train_29410
[ { "id": "split_0_train_29410_passage", "type": "progene_text", "text": [ "We developed chimeric GFP expression constructs containing all combinations of the three major domains of ankyrin - B and ankyrin-G to determine which domain(s) of ankyrin-B are required for ankyrin-B - specific functions ." ], "offsets": [ [ 0, 223 ] ] } ]
[ { "id": "split_0_train_47565_entity", "type": "progene_text", "text": [ "GFP" ], "offsets": [ [ 22, 25 ] ], "normalized": [] }, { "id": "split_0_train_47566_entity", "type": "progene_text", "text": [ "ankyrin - B" ], "offsets": [ [ 106, 117 ] ], "normalized": [] }, { "id": "split_0_train_47567_entity", "type": "progene_text", "text": [ "ankyrin-G" ], "offsets": [ [ 122, 131 ] ], "normalized": [] }, { "id": "split_0_train_47568_entity", "type": "progene_text", "text": [ "ankyrin-B" ], "offsets": [ [ 164, 173 ] ], "normalized": [] }, { "id": "split_0_train_47569_entity", "type": "progene_text", "text": [ "ankyrin-B" ], "offsets": [ [ 191, 200 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29411
split_0_train_29411
[ { "id": "split_0_train_29411_passage", "type": "progene_text", "text": [ "The death / C - terminal domain of ankyrin - B determined activity of ankyrin-B / G chimeras in localization in a striated pattern in cardiomyocytes and in restoration of a normal striated distribution of both ryanodine and inositol 1,4,5-trisphosphate receptors as well as normal beat frequency of contracting cardiomyocytes ." ], "offsets": [ [ 0, 327 ] ] } ]
[ { "id": "split_0_train_47570_entity", "type": "progene_text", "text": [ "ankyrin - B" ], "offsets": [ [ 35, 46 ] ], "normalized": [] }, { "id": "split_0_train_47571_entity", "type": "progene_text", "text": [ "ankyrin-B / G" ], "offsets": [ [ 70, 83 ] ], "normalized": [] }, { "id": "split_0_train_47572_entity", "type": "progene_text", "text": [ "ryanodine and inositol 1,4,5-trisphosphate receptors" ], "offsets": [ [ 210, 262 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29412
split_0_train_29412
[ { "id": "split_0_train_29412_passage", "type": "progene_text", "text": [ "Further deletions within the death / C - terminal domain demonstrated that the C - terminal domain determines ankyrin - B activity , whereas deletion of the death domain had no effect ." ], "offsets": [ [ 0, 185 ] ] } ]
[ { "id": "split_0_train_47573_entity", "type": "progene_text", "text": [ "ankyrin - B" ], "offsets": [ [ 110, 121 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29413
split_0_train_29413
[ { "id": "split_0_train_29413_passage", "type": "progene_text", "text": [ "C - terminal domains are the most divergent between ankyrin isoforms and are candidates to encode the signal(s) that enable ankyrins to selectively target proteins to diverse cellular sites ." ], "offsets": [ [ 0, 191 ] ] } ]
[ { "id": "split_0_train_47574_entity", "type": "progene_text", "text": [ "ankyrin" ], "offsets": [ [ 52, 59 ] ], "normalized": [] }, { "id": "split_0_train_47575_entity", "type": "progene_text", "text": [ "ankyrins" ], "offsets": [ [ 124, 132 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29414
split_0_train_29414
[ { "id": "split_0_train_29414_passage", "type": "progene_text", "text": [ "Identification and molecular characterisation of hordoindolines from barley grain ." ], "offsets": [ [ 0, 83 ] ] } ]
[]
[]
[]
[]
split_0_train_29415
split_0_train_29415
[ { "id": "split_0_train_29415_passage", "type": "progene_text", "text": [ "Grain texture in barley is an important quality character as soft - textured cultivars have better malting quality ." ], "offsets": [ [ 0, 116 ] ] } ]
[]
[]
[]
[]
split_0_train_29416
split_0_train_29416
[ { "id": "split_0_train_29416_passage", "type": "progene_text", "text": [ "In wheat , texture is considered to be determined by the puroindolines , a group of basic hydrophobic proteins present on the surface of the starch granule ." ], "offsets": [ [ 0, 157 ] ] } ]
[]
[]
[]
[]
split_0_train_29417
split_0_train_29417
[ { "id": "split_0_train_29417_passage", "type": "progene_text", "text": [ "Hard wheats have been proposed to lack puroindoline a or to have mutant forms of puroindoline b which do not bind to the granule surface ." ], "offsets": [ [ 0, 138 ] ] } ]
[ { "id": "split_0_train_47576_entity", "type": "progene_text", "text": [ "puroindoline a" ], "offsets": [ [ 39, 53 ] ], "normalized": [] }, { "id": "split_0_train_47577_entity", "type": "progene_text", "text": [ "puroindoline b" ], "offsets": [ [ 81, 95 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29418
split_0_train_29418
[ { "id": "split_0_train_29418_passage", "type": "progene_text", "text": [ "Analysis of six barley cultivars ( three soft - textured and three hard ) showed that all contained proteins homologous to wheat puroindoline b , but PCR analysis failed to show any differences in amino acid sequences similar to those which have been proposed to determine textural differences in wheat ." ], "offsets": [ [ 0, 304 ] ] } ]
[ { "id": "split_0_train_47578_entity", "type": "progene_text", "text": [ "puroindoline b" ], "offsets": [ [ 129, 143 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29419
split_0_train_29419
[ { "id": "split_0_train_29419_passage", "type": "progene_text", "text": [ "Southern blot analysis showed two hordoindoline b genes which were isolated and shown to encode proteins with 94 % sequence identity ." ], "offsets": [ [ 0, 134 ] ] } ]
[ { "id": "split_0_train_47579_entity", "type": "progene_text", "text": [ "hordoindoline b" ], "offsets": [ [ 34, 49 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29420
split_0_train_29420
[ { "id": "split_0_train_29420_passage", "type": "progene_text", "text": [ "Expression of hordoindoline b mRNA occurred in the starchy endosperm and aleurone layer of the developing seed , but not in the embryo ." ], "offsets": [ [ 0, 136 ] ] } ]
[ { "id": "split_0_train_47580_entity", "type": "progene_text", "text": [ "hordoindoline b" ], "offsets": [ [ 14, 29 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29421
split_0_train_29421
[ { "id": "split_0_train_29421_passage", "type": "progene_text", "text": [ "Analysis of seven soft - and six hard - textured barley varieties showed that all contained hordoindoline a except two hard varieties ( Sundance , Hart ) which were subsequently shown to both lack hordoindoline a mRNA ." ], "offsets": [ [ 0, 219 ] ] } ]
[ { "id": "split_0_train_47581_entity", "type": "progene_text", "text": [ "hordoindoline" ], "offsets": [ [ 92, 105 ] ], "normalized": [] }, { "id": "split_0_train_47582_entity", "type": "progene_text", "text": [ "hordoindoline a" ], "offsets": [ [ 197, 212 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29422
split_0_train_29422
[ { "id": "split_0_train_29422_passage", "type": "progene_text", "text": [ "It was therefore concluded that there is not a clear relationship between the presence of hordoindoline a and grain texture in barley ." ], "offsets": [ [ 0, 135 ] ] } ]
[ { "id": "split_0_train_47583_entity", "type": "progene_text", "text": [ "hordoindoline" ], "offsets": [ [ 90, 103 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29423
split_0_train_29423
[ { "id": "split_0_train_29423_passage", "type": "progene_text", "text": [ "Antiapoptotic proteins ." ], "offsets": [ [ 0, 24 ] ] } ]
[]
[]
[]
[]
split_0_train_29424
split_0_train_29424
[ { "id": "split_0_train_29424_passage", "type": "progene_text", "text": [ "The bcl-2 and inhibitor of apoptosis protein families ." ], "offsets": [ [ 0, 55 ] ] } ]
[ { "id": "split_0_train_47584_entity", "type": "progene_text", "text": [ "bcl-2 and inhibitor of apoptosis protein families" ], "offsets": [ [ 4, 53 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29425
split_0_train_29425
[ { "id": "split_0_train_29425_passage", "type": "progene_text", "text": [ "The balance between pro - and antiapoptotic proteins can determine cellular fate ." ], "offsets": [ [ 0, 82 ] ] } ]
[]
[]
[]
[]
split_0_train_29426
split_0_train_29426
[ { "id": "split_0_train_29426_passage", "type": "progene_text", "text": [ "In this regard , the Bcl-2 and IAP protein families have evolved as highly conserved regulators of cell death ." ], "offsets": [ [ 0, 111 ] ] } ]
[ { "id": "split_0_train_47585_entity", "type": "progene_text", "text": [ "Bcl-2 and IAP protein families" ], "offsets": [ [ 21, 51 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29427
split_0_train_29427
[ { "id": "split_0_train_29427_passage", "type": "progene_text", "text": [ "A further testament to their critical roles in maintaining balance between cell life and death may be the increasing implication of Bcl-2 and TAP proteins in the pathologies of human diseases ." ], "offsets": [ [ 0, 193 ] ] } ]
[ { "id": "split_0_train_47586_entity", "type": "progene_text", "text": [ "Bcl-2" ], "offsets": [ [ 132, 137 ] ], "normalized": [] }, { "id": "split_0_train_47587_entity", "type": "progene_text", "text": [ "TAP" ], "offsets": [ [ 142, 145 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29428
split_0_train_29428
[ { "id": "split_0_train_29428_passage", "type": "progene_text", "text": [ "Although much has been learned about these families of proteins , future studies of the Bcl-2 and IAP families are sure to hold more exciting discoveries and will continue to reveal new strategies for combating human diseases ." ], "offsets": [ [ 0, 227 ] ] } ]
[ { "id": "split_0_train_47588_entity", "type": "progene_text", "text": [ "Bcl-2 and IAP families" ], "offsets": [ [ 88, 110 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29429
split_0_train_29429
[ { "id": "split_0_train_29429_passage", "type": "progene_text", "text": [ "Manipulation of hyaluronan synthase expression in prostate adenocarcinoma cells alters pericellular matrix retention and adhesion to bone marrow endothelial cells ." ], "offsets": [ [ 0, 164 ] ] } ]
[ { "id": "split_0_train_47589_entity", "type": "progene_text", "text": [ "hyaluronan synthase" ], "offsets": [ [ 16, 35 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29430
split_0_train_29430
[ { "id": "split_0_train_29430_passage", "type": "progene_text", "text": [ "Prostate cancer metastasis to bone marrow involves initial adhesion of tumor cells to the bone marrow endothelium , followed by transmigration and proliferation within the marrow ." ], "offsets": [ [ 0, 180 ] ] } ]
[]
[]
[]
[]
split_0_train_29431
split_0_train_29431
[ { "id": "split_0_train_29431_passage", "type": "progene_text", "text": [ "Rapid , specific adhesion of highly metastatic prostate adenocarcinoma cells ( PC3M-LN4 ) to bone marrow endothelial cell ( BMEC ) lines requires a pericellular hyaluronan ( HA ) matrix and correlates with dramatically up - regulated HA synthase ( HAS ) expression ." ], "offsets": [ [ 0, 266 ] ] } ]
[ { "id": "split_0_train_47590_entity", "type": "progene_text", "text": [ "HA synthase" ], "offsets": [ [ 234, 245 ] ], "normalized": [] }, { "id": "split_0_train_47591_entity", "type": "progene_text", "text": [ "HAS" ], "offsets": [ [ 248, 251 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29432
split_0_train_29432
[ { "id": "split_0_train_29432_passage", "type": "progene_text", "text": [ "Non - metastatic prostate tumor cells ( LNCaP ) do not assemble a HA matrix , adhere poorly to BMECs , and express normal levels of HAS ." ], "offsets": [ [ 0, 137 ] ] } ]
[ { "id": "split_0_train_47592_entity", "type": "progene_text", "text": [ "HAS" ], "offsets": [ [ 132, 135 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29433
split_0_train_29433
[ { "id": "split_0_train_29433_passage", "type": "progene_text", "text": [ "Preferential bone metastasis of prostate carcinoma cells may therefore be facilitated by tumor cell HA biosynthesis ." ], "offsets": [ [ 0, 117 ] ] } ]
[]
[]
[]
[]
split_0_train_29434
split_0_train_29434
[ { "id": "split_0_train_29434_passage", "type": "progene_text", "text": [ "In this report , HAS gene expression was manipulated to investigate the direct impact of prostate tumor cell HA production on adhesion to BMECs ." ], "offsets": [ [ 0, 145 ] ] } ]
[ { "id": "split_0_train_47593_entity", "type": "progene_text", "text": [ "HAS" ], "offsets": [ [ 17, 20 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29435
split_0_train_29435
[ { "id": "split_0_train_29435_passage", "type": "progene_text", "text": [ "PC3M-LN4 cells stably transfected with antisense HAS2 and HAS3 failed to form pericellular matrices ." ], "offsets": [ [ 0, 101 ] ] } ]
[ { "id": "split_0_train_47594_entity", "type": "progene_text", "text": [ "HAS2" ], "offsets": [ [ 49, 53 ] ], "normalized": [] }, { "id": "split_0_train_47595_entity", "type": "progene_text", "text": [ "HAS3" ], "offsets": [ [ 58, 62 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29436
split_0_train_29436
[ { "id": "split_0_train_29436_passage", "type": "progene_text", "text": [ "Adhesion of these transfectants to BMECs was significantly diminished , comparable to the low level exhibited by LNCaP cells ." ], "offsets": [ [ 0, 126 ] ] } ]
[]
[]
[]
[]
split_0_train_29437
split_0_train_29437
[ { "id": "split_0_train_29437_passage", "type": "progene_text", "text": [ "Upon transfection with full-length HAS2 or HAS3 , the non - adherent LNCaP cells retained pericellular HA and adhered to BMECs ." ], "offsets": [ [ 0, 128 ] ] } ]
[ { "id": "split_0_train_47596_entity", "type": "progene_text", "text": [ "HAS2" ], "offsets": [ [ 35, 39 ] ], "normalized": [] }, { "id": "split_0_train_47597_entity", "type": "progene_text", "text": [ "HAS3" ], "offsets": [ [ 43, 47 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29438
split_0_train_29438
[ { "id": "split_0_train_29438_passage", "type": "progene_text", "text": [ "The results of this study are consistent with a model in which HA matrix formation , BMEC adhesion , and metastatic potential are mediated by HAS expression ." ], "offsets": [ [ 0, 158 ] ] } ]
[ { "id": "split_0_train_47598_entity", "type": "progene_text", "text": [ "HAS" ], "offsets": [ [ 142, 145 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29439
split_0_train_29439
[ { "id": "split_0_train_29439_passage", "type": "progene_text", "text": [ "CD40 ligation induces macrophage IL-10 and TNF-alpha production : differential use of the PI3K and p42 / 44 MAPK - pathways ." ], "offsets": [ [ 0, 125 ] ] } ]
[ { "id": "split_0_train_47599_entity", "type": "progene_text", "text": [ "CD40" ], "offsets": [ [ 0, 4 ] ], "normalized": [] }, { "id": "split_0_train_47600_entity", "type": "progene_text", "text": [ "IL-10" ], "offsets": [ [ 33, 38 ] ], "normalized": [] }, { "id": "split_0_train_47601_entity", "type": "progene_text", "text": [ "TNF-alpha" ], "offsets": [ [ 43, 52 ] ], "normalized": [] }, { "id": "split_0_train_47602_entity", "type": "progene_text", "text": [ "PI3K" ], "offsets": [ [ 90, 94 ] ], "normalized": [] }, { "id": "split_0_train_47603_entity", "type": "progene_text", "text": [ "p42 / 44 MAPK" ], "offsets": [ [ 99, 112 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29440
split_0_train_29440
[ { "id": "split_0_train_29440_passage", "type": "progene_text", "text": [ "Interleukin 10 ( IL-10 ) is an anti - inflammatory cytokine produced in the rheumatoid arthritis ( RA ) joint by macrophages / monocytes and infiltrating peripheral blood derived lymphocytes ." ], "offsets": [ [ 0, 192 ] ] } ]
[ { "id": "split_0_train_47604_entity", "type": "progene_text", "text": [ "Interleukin 10" ], "offsets": [ [ 0, 14 ] ], "normalized": [] }, { "id": "split_0_train_47605_entity", "type": "progene_text", "text": [ "IL-10" ], "offsets": [ [ 17, 22 ] ], "normalized": [] }, { "id": "split_0_train_47606_entity", "type": "progene_text", "text": [ "cytokine" ], "offsets": [ [ 51, 59 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29441
split_0_train_29441
[ { "id": "split_0_train_29441_passage", "type": "progene_text", "text": [ "Recent data suggest a role for physical cell - to - cell interactions in the production of IL-10 ." ], "offsets": [ [ 0, 98 ] ] } ]
[ { "id": "split_0_train_47607_entity", "type": "progene_text", "text": [ "IL-10" ], "offsets": [ [ 91, 96 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29442
split_0_train_29442
[ { "id": "split_0_train_29442_passage", "type": "progene_text", "text": [ "In this report , we have investigated the signalling mechanisms involved in IL-10 production by peripheral blood - derived macrophages upon interaction with fixed CD40L transfectants ." ], "offsets": [ [ 0, 184 ] ] } ]
[ { "id": "split_0_train_47608_entity", "type": "progene_text", "text": [ "IL-10" ], "offsets": [ [ 76, 81 ] ], "normalized": [] }, { "id": "split_0_train_47609_entity", "type": "progene_text", "text": [ "CD40L" ], "offsets": [ [ 163, 168 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29443
split_0_train_29443
[ { "id": "split_0_train_29443_passage", "type": "progene_text", "text": [ "IL-10 and tumour necrosis factor alpha ( TNF-alpha ) are produced by macrophage colony - stimulating factor ( M-CSF ) - primed monocytes / macrophages in response to CD40 ligation ." ], "offsets": [ [ 0, 181 ] ] } ]
[ { "id": "split_0_train_47610_entity", "type": "progene_text", "text": [ "IL-10" ], "offsets": [ [ 0, 5 ] ], "normalized": [] }, { "id": "split_0_train_47611_entity", "type": "progene_text", "text": [ "tumour necrosis factor alpha" ], "offsets": [ [ 10, 38 ] ], "normalized": [] }, { "id": "split_0_train_47612_entity", "type": "progene_text", "text": [ "TNF-alpha" ], "offsets": [ [ 41, 50 ] ], "normalized": [] }, { "id": "split_0_train_47613_entity", "type": "progene_text", "text": [ "macrophage colony - stimulating factor" ], "offsets": [ [ 69, 107 ] ], "normalized": [] }, { "id": "split_0_train_47614_entity", "type": "progene_text", "text": [ "M-CSF" ], "offsets": [ [ 110, 115 ] ], "normalized": [] }, { "id": "split_0_train_47615_entity", "type": "progene_text", "text": [ "CD40" ], "offsets": [ [ 166, 170 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29444
split_0_train_29444
[ { "id": "split_0_train_29444_passage", "type": "progene_text", "text": [ "The utilization of the inhibitors , wortmannin and LY294002 , demonstrated a role for phosphatidylinositol 3-kinase ( PI3K ) whereas rapamycin demonstrated p70 S6 - kinase ( p70S6K ) involvement in the production of IL-10 by these monocytes ." ], "offsets": [ [ 0, 242 ] ] } ]
[ { "id": "split_0_train_47616_entity", "type": "progene_text", "text": [ "phosphatidylinositol 3-kinase" ], "offsets": [ [ 86, 115 ] ], "normalized": [] }, { "id": "split_0_train_47617_entity", "type": "progene_text", "text": [ "PI3K" ], "offsets": [ [ 118, 122 ] ], "normalized": [] }, { "id": "split_0_train_47618_entity", "type": "progene_text", "text": [ "p70 S6 - kinase" ], "offsets": [ [ 156, 171 ] ], "normalized": [] }, { "id": "split_0_train_47619_entity", "type": "progene_text", "text": [ "p70S6K" ], "offsets": [ [ 174, 180 ] ], "normalized": [] }, { "id": "split_0_train_47620_entity", "type": "progene_text", "text": [ "IL-10" ], "offsets": [ [ 216, 221 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29445
split_0_train_29445
[ { "id": "split_0_train_29445_passage", "type": "progene_text", "text": [ "The production of TNF-alpha was enhanced by wortmannin and LY294002 , suggesting negative regulation by PI3K ; however , it was dependent on p70S6K suggesting a PI3K - independent mechanism of p70S6K activation ." ], "offsets": [ [ 0, 212 ] ] } ]
[ { "id": "split_0_train_47621_entity", "type": "progene_text", "text": [ "TNF-alpha" ], "offsets": [ [ 18, 27 ] ], "normalized": [] }, { "id": "split_0_train_47622_entity", "type": "progene_text", "text": [ "PI3K" ], "offsets": [ [ 104, 108 ] ], "normalized": [] }, { "id": "split_0_train_47623_entity", "type": "progene_text", "text": [ "p70S6K" ], "offsets": [ [ 141, 147 ] ], "normalized": [] }, { "id": "split_0_train_47624_entity", "type": "progene_text", "text": [ "PI3K" ], "offsets": [ [ 161, 165 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29446
split_0_train_29446
[ { "id": "split_0_train_29446_passage", "type": "progene_text", "text": [ "One alternative pathway that activates p70S6K independently of PI3K and also differentiates between IL-10 and TNF-alpha is the p42 / 44 mitogen - activated protein kinase ( MAPK ) , which regulates TNF-alpha production in a PI3K - independent manner ." ], "offsets": [ [ 0, 251 ] ] } ]
[ { "id": "split_0_train_47625_entity", "type": "progene_text", "text": [ "p70S6K" ], "offsets": [ [ 39, 45 ] ], "normalized": [] }, { "id": "split_0_train_47626_entity", "type": "progene_text", "text": [ "PI3K" ], "offsets": [ [ 63, 67 ] ], "normalized": [] }, { "id": "split_0_train_47627_entity", "type": "progene_text", "text": [ "IL-10" ], "offsets": [ [ 100, 105 ] ], "normalized": [] }, { "id": "split_0_train_47628_entity", "type": "progene_text", "text": [ "TNF-alpha" ], "offsets": [ [ 110, 119 ] ], "normalized": [] }, { "id": "split_0_train_47629_entity", "type": "progene_text", "text": [ "p42 / 44 mitogen - activated protein kinase" ], "offsets": [ [ 127, 170 ] ], "normalized": [] }, { "id": "split_0_train_47630_entity", "type": "progene_text", "text": [ "MAPK" ], "offsets": [ [ 173, 177 ] ], "normalized": [] }, { "id": "split_0_train_47631_entity", "type": "progene_text", "text": [ "TNF-alpha" ], "offsets": [ [ 198, 207 ] ], "normalized": [] }, { "id": "split_0_train_47632_entity", "type": "progene_text", "text": [ "PI3K" ], "offsets": [ [ 224, 228 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29447
split_0_train_29447
[ { "id": "split_0_train_29447_passage", "type": "progene_text", "text": [ "These observations suggest that CD40 ligation induces macrophage IL-10 and TNF-alpha production , the mechanism of which is p70S6K - dependent yet bifurcates at the level of PI3K and p42 / 44 MAPK ." ], "offsets": [ [ 0, 198 ] ] } ]
[ { "id": "split_0_train_47633_entity", "type": "progene_text", "text": [ "CD40" ], "offsets": [ [ 32, 36 ] ], "normalized": [] }, { "id": "split_0_train_47634_entity", "type": "progene_text", "text": [ "IL-10" ], "offsets": [ [ 65, 70 ] ], "normalized": [] }, { "id": "split_0_train_47635_entity", "type": "progene_text", "text": [ "TNF-alpha" ], "offsets": [ [ 75, 84 ] ], "normalized": [] }, { "id": "split_0_train_47636_entity", "type": "progene_text", "text": [ "p70S6K" ], "offsets": [ [ 124, 130 ] ], "normalized": [] }, { "id": "split_0_train_47637_entity", "type": "progene_text", "text": [ "PI3K" ], "offsets": [ [ 174, 178 ] ], "normalized": [] }, { "id": "split_0_train_47638_entity", "type": "progene_text", "text": [ "p42 / 44 MAPK" ], "offsets": [ [ 183, 196 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29448
split_0_train_29448
[ { "id": "split_0_train_29448_passage", "type": "progene_text", "text": [ "Regulated trafficking of neurotransmitter transporters : common notes but different melodies ." ], "offsets": [ [ 0, 94 ] ] } ]
[ { "id": "split_0_train_47639_entity", "type": "progene_text", "text": [ "neurotransmitter transporters" ], "offsets": [ [ 25, 54 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29449
split_0_train_29449
[ { "id": "split_0_train_29449_passage", "type": "progene_text", "text": [ "The activity of biogenic amine and amino acid neurotransmitters is limited by presynaptic and astrocytic Na ( + ) - dependent transport systems ." ], "offsets": [ [ 0, 145 ] ] } ]
[]
[]
[]
[]
split_0_train_29450
split_0_train_29450
[ { "id": "split_0_train_29450_passage", "type": "progene_text", "text": [ "Their functional importance is underscored by the observation that these transporters are the targets of broad classes of psychotherapeutic agents , including antidepressants and stimulants ." ], "offsets": [ [ 0, 191 ] ] } ]
[]
[]
[]
[]
split_0_train_29451
split_0_train_29451
[ { "id": "split_0_train_29451_passage", "type": "progene_text", "text": [ "Early studies suggested that the activity of these transporters can be fine tuned by a number of different signaling pathways ." ], "offsets": [ [ 0, 127 ] ] } ]
[]
[]
[]
[]
split_0_train_29452
split_0_train_29452
[ { "id": "split_0_train_29452_passage", "type": "progene_text", "text": [ "In the past five years , several groups have provided compelling evidence that changing the cell surface availability of these transporters contributes to this fine tuning ." ], "offsets": [ [ 0, 173 ] ] } ]
[]
[]
[]
[]
split_0_train_29453
split_0_train_29453
[ { "id": "split_0_train_29453_passage", "type": "progene_text", "text": [ "This regulated trafficking can result in rapid ( within minutes ) increases or decreases in the plasma membrane expression of these transporters and is independent of transcriptional or translational control mechanisms ." ], "offsets": [ [ 0, 220 ] ] } ]
[]
[]
[]
[]
split_0_train_29454
split_0_train_29454
[ { "id": "split_0_train_29454_passage", "type": "progene_text", "text": [ "Many of the same signaling molecules , including protein kinase C ( PKC ) , tyrosine kinase , phosphatidylinositol 3-kinase ( P13 - K ) , and protein phosphatase , regulate the transporters for different neurotransmitters ." ], "offsets": [ [ 0, 223 ] ] } ]
[ { "id": "split_0_train_47640_entity", "type": "progene_text", "text": [ "protein kinase C" ], "offsets": [ [ 49, 65 ] ], "normalized": [] }, { "id": "split_0_train_47641_entity", "type": "progene_text", "text": [ "PKC" ], "offsets": [ [ 68, 71 ] ], "normalized": [] }, { "id": "split_0_train_47642_entity", "type": "progene_text", "text": [ "tyrosine kinase" ], "offsets": [ [ 76, 91 ] ], "normalized": [] }, { "id": "split_0_train_47643_entity", "type": "progene_text", "text": [ "phosphatidylinositol 3-kinase" ], "offsets": [ [ 94, 123 ] ], "normalized": [] }, { "id": "split_0_train_47644_entity", "type": "progene_text", "text": [ "P13 - K" ], "offsets": [ [ 126, 133 ] ], "normalized": [] }, { "id": "split_0_train_47645_entity", "type": "progene_text", "text": [ "protein phosphatase" ], "offsets": [ [ 142, 161 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29455
split_0_train_29455
[ { "id": "split_0_train_29455_passage", "type": "progene_text", "text": [ "In addition to these classical receptor activated pathways , transporter substrates also regulate activity and cell surface expression of these transporters ." ], "offsets": [ [ 0, 158 ] ] } ]
[]
[]
[]
[]
split_0_train_29456
split_0_train_29456
[ { "id": "split_0_train_29456_passage", "type": "progene_text", "text": [ "In fact , some of the transporters form complexes with signaling molecules ." ], "offsets": [ [ 0, 76 ] ] } ]
[]
[]
[]
[]
split_0_train_29457
split_0_train_29457
[ { "id": "split_0_train_29457_passage", "type": "progene_text", "text": [ "Given the functional and genetic similarities of these transporters , it is not surprising that the same signaling molecules regulate their trafficking , but except for the molecules , the actual effects on individual transporters are remarkably different ." ], "offsets": [ [ 0, 257 ] ] } ]
[]
[]
[]
[]
split_0_train_29458
split_0_train_29458
[ { "id": "split_0_train_29458_passage", "type": "progene_text", "text": [ "It is as if the same musical notes have been rearranged into several different melodies ." ], "offsets": [ [ 0, 89 ] ] } ]
[]
[]
[]
[]
split_0_train_29459
split_0_train_29459
[ { "id": "split_0_train_29459_passage", "type": "progene_text", "text": [ "Fc alpha RI / CD89 circulates in human serum covalently linked to IgA in a polymeric state ." ], "offsets": [ [ 0, 92 ] ] } ]
[ { "id": "split_0_train_47646_entity", "type": "progene_text", "text": [ "Fc alpha RI" ], "offsets": [ [ 0, 11 ] ], "normalized": [] }, { "id": "split_0_train_47647_entity", "type": "progene_text", "text": [ "CD89" ], "offsets": [ [ 14, 18 ] ], "normalized": [] }, { "id": "split_0_train_47648_entity", "type": "progene_text", "text": [ "IgA" ], "offsets": [ [ 66, 69 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29460
split_0_train_29460
[ { "id": "split_0_train_29460_passage", "type": "progene_text", "text": [ "The FcR for IgA CD89 / FcalphaRI , is a type I receptor glycoprotein , expressed on myeloid cells , with important immune effector functions ." ], "offsets": [ [ 0, 142 ] ] } ]
[ { "id": "split_0_train_47649_entity", "type": "progene_text", "text": [ "FcR for IgA" ], "offsets": [ [ 4, 15 ] ], "normalized": [] }, { "id": "split_0_train_47650_entity", "type": "progene_text", "text": [ "CD89" ], "offsets": [ [ 16, 20 ] ], "normalized": [] }, { "id": "split_0_train_47651_entity", "type": "progene_text", "text": [ "FcalphaRI" ], "offsets": [ [ 23, 32 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29461
split_0_train_29461
[ { "id": "split_0_train_29461_passage", "type": "progene_text", "text": [ "In vitro CD89 can be released from CD89 - expressing cells upon activation ." ], "offsets": [ [ 0, 76 ] ] } ]
[ { "id": "split_0_train_47652_entity", "type": "progene_text", "text": [ "CD89" ], "offsets": [ [ 9, 13 ] ], "normalized": [] }, { "id": "split_0_train_47653_entity", "type": "progene_text", "text": [ "CD89" ], "offsets": [ [ 35, 39 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29462
split_0_train_29462
[ { "id": "split_0_train_29462_passage", "type": "progene_text", "text": [ "Little information is available on the existence of this soluble molecule in vivo ." ], "offsets": [ [ 0, 83 ] ] } ]
[]
[]
[]
[]
split_0_train_29463
split_0_train_29463
[ { "id": "split_0_train_29463_passage", "type": "progene_text", "text": [ "Using specific and sensitive ELISA techniques ( detection limit 50 pg / ml ) , we were not able to detect circulating CD89 in human sera ." ], "offsets": [ [ 0, 138 ] ] } ]
[ { "id": "split_0_train_47654_entity", "type": "progene_text", "text": [ "CD89" ], "offsets": [ [ 118, 122 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29464
split_0_train_29464
[ { "id": "split_0_train_29464_passage", "type": "progene_text", "text": [ "However , using Western blotting , a 30 - kDa soluble CD89 molecule was demonstrated in both serum and plasma ." ], "offsets": [ [ 0, 111 ] ] } ]
[ { "id": "split_0_train_47655_entity", "type": "progene_text", "text": [ "CD89" ], "offsets": [ [ 54, 58 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29465
split_0_train_29465
[ { "id": "split_0_train_29465_passage", "type": "progene_text", "text": [ "Moreover , using a specific semiquantitative dot - blot system , we found CD89 in all human sera tested ( mean concentration 1900 ng / ml ) ." ], "offsets": [ [ 0, 141 ] ] } ]
[ { "id": "split_0_train_47656_entity", "type": "progene_text", "text": [ "CD89" ], "offsets": [ [ 74, 78 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29466
split_0_train_29466
[ { "id": "split_0_train_29466_passage", "type": "progene_text", "text": [ "Size fractionation of human serum using gel filtration chromatography showed that the CD89 molecule was predominantly present in larger molecular mass fractions ." ], "offsets": [ [ 0, 162 ] ] } ]
[ { "id": "split_0_train_47657_entity", "type": "progene_text", "text": [ "CD89" ], "offsets": [ [ 86, 90 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29467
split_0_train_29467
[ { "id": "split_0_train_29467_passage", "type": "progene_text", "text": [ "Direct complexes between IgA and CD89 were demonstrated by anti - IgA affinity purification , and when analyzed under nonreducing conditions appeared to be covalently linked ." ], "offsets": [ [ 0, 175 ] ] } ]
[ { "id": "split_0_train_47658_entity", "type": "progene_text", "text": [ "IgA" ], "offsets": [ [ 25, 28 ] ], "normalized": [] }, { "id": "split_0_train_47659_entity", "type": "progene_text", "text": [ "CD89" ], "offsets": [ [ 33, 37 ] ], "normalized": [] }, { "id": "split_0_train_47660_entity", "type": "progene_text", "text": [ "IgA" ], "offsets": [ [ 66, 69 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29468
split_0_train_29468
[ { "id": "split_0_train_29468_passage", "type": "progene_text", "text": [ "Size fractionation of affinity - purified IgA showed the presence of soluble CD89 only in the high molecular mass fractions of IgA , but not in monomeric IgA ." ], "offsets": [ [ 0, 159 ] ] } ]
[ { "id": "split_0_train_47661_entity", "type": "progene_text", "text": [ "IgA" ], "offsets": [ [ 42, 45 ] ], "normalized": [] }, { "id": "split_0_train_47662_entity", "type": "progene_text", "text": [ "CD89" ], "offsets": [ [ 77, 81 ] ], "normalized": [] }, { "id": "split_0_train_47663_entity", "type": "progene_text", "text": [ "IgA" ], "offsets": [ [ 127, 130 ] ], "normalized": [] }, { "id": "split_0_train_47664_entity", "type": "progene_text", "text": [ "IgA" ], "offsets": [ [ 154, 157 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29469
split_0_train_29469
[ { "id": "split_0_train_29469_passage", "type": "progene_text", "text": [ "High molecular mass complexes of CD89 - IgA could be distinguished from J chain containing dimeric IgA ." ], "offsets": [ [ 0, 104 ] ] } ]
[ { "id": "split_0_train_47665_entity", "type": "progene_text", "text": [ "CD89" ], "offsets": [ [ 33, 37 ] ], "normalized": [] }, { "id": "split_0_train_47666_entity", "type": "progene_text", "text": [ "IgA" ], "offsets": [ [ 40, 43 ] ], "normalized": [] }, { "id": "split_0_train_47667_entity", "type": "progene_text", "text": [ "IgA" ], "offsets": [ [ 99, 102 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29470
split_0_train_29470
[ { "id": "split_0_train_29470_passage", "type": "progene_text", "text": [ "These data show that CD89 circulates in complex with IgA , and suggest that CD89 might contribute to the formation of polymeric serum IgA ." ], "offsets": [ [ 0, 139 ] ] } ]
[ { "id": "split_0_train_47668_entity", "type": "progene_text", "text": [ "CD89" ], "offsets": [ [ 21, 25 ] ], "normalized": [] }, { "id": "split_0_train_47669_entity", "type": "progene_text", "text": [ "IgA" ], "offsets": [ [ 53, 56 ] ], "normalized": [] }, { "id": "split_0_train_47670_entity", "type": "progene_text", "text": [ "CD89" ], "offsets": [ [ 76, 80 ] ], "normalized": [] }, { "id": "split_0_train_47671_entity", "type": "progene_text", "text": [ "IgA" ], "offsets": [ [ 134, 137 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29471
split_0_train_29471
[ { "id": "split_0_train_29471_passage", "type": "progene_text", "text": [ "Insulin - degrading enzyme rapidly removes the beta-amyloid precursor protein intracellular domain ( AICD ) ." ], "offsets": [ [ 0, 109 ] ] } ]
[ { "id": "split_0_train_47672_entity", "type": "progene_text", "text": [ "Insulin - degrading enzyme" ], "offsets": [ [ 0, 26 ] ], "normalized": [] }, { "id": "split_0_train_47673_entity", "type": "progene_text", "text": [ "beta-amyloid precursor protein intracellular domain" ], "offsets": [ [ 47, 98 ] ], "normalized": [] }, { "id": "split_0_train_47674_entity", "type": "progene_text", "text": [ "AICD" ], "offsets": [ [ 101, 105 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29472
split_0_train_29472
[ { "id": "split_0_train_29472_passage", "type": "progene_text", "text": [ "The intramembranous gamma - secretase cleavage of the beta-amyloid precursor protein ( APP ) is dependent on biologically active presenilins ( PS ) ." ], "offsets": [ [ 0, 149 ] ] } ]
[ { "id": "split_0_train_47675_entity", "type": "progene_text", "text": [ "gamma - secretase" ], "offsets": [ [ 20, 37 ] ], "normalized": [] }, { "id": "split_0_train_47676_entity", "type": "progene_text", "text": [ "beta-amyloid precursor protein" ], "offsets": [ [ 54, 84 ] ], "normalized": [] }, { "id": "split_0_train_47677_entity", "type": "progene_text", "text": [ "APP" ], "offsets": [ [ 87, 90 ] ], "normalized": [] }, { "id": "split_0_train_47678_entity", "type": "progene_text", "text": [ "presenilins" ], "offsets": [ [ 129, 140 ] ], "normalized": [] }, { "id": "split_0_train_47679_entity", "type": "progene_text", "text": [ "PS" ], "offsets": [ [ 143, 145 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29473
split_0_train_29473
[ { "id": "split_0_train_29473_passage", "type": "progene_text", "text": [ "Notch also undergoes a similar PS - dependent gamma - secretase - like cleavage , resulting in the liberation of the Notch intracellular domain ( NICD ) , which is critically required for developmental signal transduction ." ], "offsets": [ [ 0, 223 ] ] } ]
[ { "id": "split_0_train_47680_entity", "type": "progene_text", "text": [ "Notch" ], "offsets": [ [ 0, 5 ] ], "normalized": [] }, { "id": "split_0_train_47681_entity", "type": "progene_text", "text": [ "PS" ], "offsets": [ [ 31, 33 ] ], "normalized": [] }, { "id": "split_0_train_47682_entity", "type": "progene_text", "text": [ "gamma - secretase" ], "offsets": [ [ 46, 63 ] ], "normalized": [] }, { "id": "split_0_train_47683_entity", "type": "progene_text", "text": [ "Notch intracellular domain" ], "offsets": [ [ 117, 143 ] ], "normalized": [] }, { "id": "split_0_train_47684_entity", "type": "progene_text", "text": [ "NICD" ], "offsets": [ [ 146, 150 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29474
split_0_train_29474
[ { "id": "split_0_train_29474_passage", "type": "progene_text", "text": [ "gamma - Secretase processing of APP results in the production of a similar fragment called AICD ( APP intracellular domain ) , which may function in nuclear signaling as well ." ], "offsets": [ [ 0, 176 ] ] } ]
[ { "id": "split_0_train_47685_entity", "type": "progene_text", "text": [ "gamma - Secretase" ], "offsets": [ [ 0, 17 ] ], "normalized": [] }, { "id": "split_0_train_47686_entity", "type": "progene_text", "text": [ "APP" ], "offsets": [ [ 32, 35 ] ], "normalized": [] }, { "id": "split_0_train_47687_entity", "type": "progene_text", "text": [ "AICD" ], "offsets": [ [ 91, 95 ] ], "normalized": [] }, { "id": "split_0_train_47688_entity", "type": "progene_text", "text": [ "APP intracellular domain" ], "offsets": [ [ 98, 122 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29475
split_0_train_29475
[ { "id": "split_0_train_29475_passage", "type": "progene_text", "text": [ "AICD , like NICD , is rapidly removed ." ], "offsets": [ [ 0, 39 ] ] } ]
[ { "id": "split_0_train_47689_entity", "type": "progene_text", "text": [ "AICD" ], "offsets": [ [ 0, 4 ] ], "normalized": [] }, { "id": "split_0_train_47690_entity", "type": "progene_text", "text": [ "NICD" ], "offsets": [ [ 12, 16 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29476
split_0_train_29476
[ { "id": "split_0_train_29476_passage", "type": "progene_text", "text": [ "By using a battery of protease inhibitors we demonstrate that AICD , in contrast to NICD , is degraded by a cytoplasmic metalloprotease ." ], "offsets": [ [ 0, 137 ] ] } ]
[ { "id": "split_0_train_47691_entity", "type": "progene_text", "text": [ "protease" ], "offsets": [ [ 22, 30 ] ], "normalized": [] }, { "id": "split_0_train_47692_entity", "type": "progene_text", "text": [ "AICD" ], "offsets": [ [ 62, 66 ] ], "normalized": [] }, { "id": "split_0_train_47693_entity", "type": "progene_text", "text": [ "NICD" ], "offsets": [ [ 84, 88 ] ], "normalized": [] }, { "id": "split_0_train_47694_entity", "type": "progene_text", "text": [ "metalloprotease" ], "offsets": [ [ 120, 135 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29477
split_0_train_29477
[ { "id": "split_0_train_29477_passage", "type": "progene_text", "text": [ "In vitro degradation of AICD can be reconstituted with cytoplasmic fractions obtained from neuronal and non - neuronal cells ." ], "offsets": [ [ 0, 126 ] ] } ]
[ { "id": "split_0_train_47695_entity", "type": "progene_text", "text": [ "AICD" ], "offsets": [ [ 24, 28 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29478
split_0_train_29478
[ { "id": "split_0_train_29478_passage", "type": "progene_text", "text": [ "Taking into account the inhibition profile and the cytoplasmic localization , we identified three candidate enzymes ( neurolysin , thimet oligopeptidase , and insulin - degrading enzyme ( IDE ) , also known as insulysin ) , which all are involved in the degradation of bioactive peptides in the brain ." ], "offsets": [ [ 0, 302 ] ] } ]
[ { "id": "split_0_train_47696_entity", "type": "progene_text", "text": [ "neurolysin" ], "offsets": [ [ 118, 128 ] ], "normalized": [] }, { "id": "split_0_train_47697_entity", "type": "progene_text", "text": [ "thimet oligopeptidase" ], "offsets": [ [ 131, 152 ] ], "normalized": [] }, { "id": "split_0_train_47698_entity", "type": "progene_text", "text": [ "insulin - degrading enzyme" ], "offsets": [ [ 159, 185 ] ], "normalized": [] }, { "id": "split_0_train_47699_entity", "type": "progene_text", "text": [ "IDE" ], "offsets": [ [ 188, 191 ] ], "normalized": [] }, { "id": "split_0_train_47700_entity", "type": "progene_text", "text": [ "insulysin" ], "offsets": [ [ 210, 219 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29479
split_0_train_29479
[ { "id": "split_0_train_29479_passage", "type": "progene_text", "text": [ "When insulin , a well characterized substrate of IDE , was added to the in vitro degradation assay , removal of AICD was efficiently blocked ." ], "offsets": [ [ 0, 142 ] ] } ]
[ { "id": "split_0_train_47701_entity", "type": "progene_text", "text": [ "insulin" ], "offsets": [ [ 5, 12 ] ], "normalized": [] }, { "id": "split_0_train_47702_entity", "type": "progene_text", "text": [ "IDE" ], "offsets": [ [ 49, 52 ] ], "normalized": [] }, { "id": "split_0_train_47703_entity", "type": "progene_text", "text": [ "AICD" ], "offsets": [ [ 112, 116 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29480
split_0_train_29480
[ { "id": "split_0_train_29480_passage", "type": "progene_text", "text": [ "Moreover , overexpression of IDE resulted in enhanced degradation of AICD , whereas overexpression of the inactive IDE E111Q mutant did not affect AICD degradation ." ], "offsets": [ [ 0, 165 ] ] } ]
[ { "id": "split_0_train_47704_entity", "type": "progene_text", "text": [ "IDE" ], "offsets": [ [ 29, 32 ] ], "normalized": [] }, { "id": "split_0_train_47705_entity", "type": "progene_text", "text": [ "AICD" ], "offsets": [ [ 69, 73 ] ], "normalized": [] }, { "id": "split_0_train_47706_entity", "type": "progene_text", "text": [ "IDE" ], "offsets": [ [ 115, 118 ] ], "normalized": [] }, { "id": "split_0_train_47707_entity", "type": "progene_text", "text": [ "AICD" ], "offsets": [ [ 147, 151 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29481
split_0_train_29481
[ { "id": "split_0_train_29481_passage", "type": "progene_text", "text": [ "Finally , immunodepletion of IDE significantly reduced the AICD degrading activity ." ], "offsets": [ [ 0, 84 ] ] } ]
[ { "id": "split_0_train_47708_entity", "type": "progene_text", "text": [ "IDE" ], "offsets": [ [ 29, 32 ] ], "normalized": [] }, { "id": "split_0_train_47709_entity", "type": "progene_text", "text": [ "AICD" ], "offsets": [ [ 59, 63 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29482
split_0_train_29482
[ { "id": "split_0_train_29482_passage", "type": "progene_text", "text": [ "Therefore our data demonstrate that IDE , which is one of the proteases implicated in the removal of extracellular Abeta , also removes the cytoplasmic product of gamma-secretase cleaved APP ." ], "offsets": [ [ 0, 192 ] ] } ]
[ { "id": "split_0_train_47710_entity", "type": "progene_text", "text": [ "IDE" ], "offsets": [ [ 36, 39 ] ], "normalized": [] }, { "id": "split_0_train_47711_entity", "type": "progene_text", "text": [ "proteases" ], "offsets": [ [ 62, 71 ] ], "normalized": [] }, { "id": "split_0_train_47712_entity", "type": "progene_text", "text": [ "Abeta" ], "offsets": [ [ 115, 120 ] ], "normalized": [] }, { "id": "split_0_train_47713_entity", "type": "progene_text", "text": [ "gamma-secretase" ], "offsets": [ [ 163, 178 ] ], "normalized": [] }, { "id": "split_0_train_47714_entity", "type": "progene_text", "text": [ "APP" ], "offsets": [ [ 187, 190 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29483
split_0_train_29483
[ { "id": "split_0_train_29483_passage", "type": "progene_text", "text": [ "Variations in respiratory muscle activity during echolocation when stationary in three species of bat ( Microchiroptera : Vespertilionidae ) ." ], "offsets": [ [ 0, 142 ] ] } ]
[]
[]
[]
[]
split_0_train_29484
split_0_train_29484
[ { "id": "split_0_train_29484_passage", "type": "progene_text", "text": [ "Echolocating bats use respiratory muscles to power the production of biosonar vocalisations ." ], "offsets": [ [ 0, 93 ] ] } ]
[]
[]
[]
[]
split_0_train_29485
split_0_train_29485
[ { "id": "split_0_train_29485_passage", "type": "progene_text", "text": [ "The physical characteristics of these calls vary among species of bat , and variations also exist in the timing and patterns of respiratory muscle recruitment during echolocation ." ], "offsets": [ [ 0, 180 ] ] } ]
[]
[]
[]
[]
split_0_train_29486
split_0_train_29486
[ { "id": "split_0_train_29486_passage", "type": "progene_text", "text": [ "We recorded electromyograms from the respiratory muscles of three species of bat ( Family Vespertilionidae ) while the animals vocalised from stationary positions ." ], "offsets": [ [ 0, 164 ] ] } ]
[]
[]
[]
[]
split_0_train_29487
split_0_train_29487
[ { "id": "split_0_train_29487_passage", "type": "progene_text", "text": [ "Activity was recorded consistently from the lateral abdominal muscles ( internal abdominal oblique and transversus abdominis ) from all calling bats , but we found much variation within and among species ." ], "offsets": [ [ 0, 205 ] ] } ]
[]
[]
[]
[]
split_0_train_29488
split_0_train_29488
[ { "id": "split_0_train_29488_passage", "type": "progene_text", "text": [ "Bats in the family Vespertilionidae devoted longer periods of expiratory muscle activity to each call than did the mormoopid bat Pteronotus parnellii ." ], "offsets": [ [ 0, 151 ] ] } ]
[]
[]
[]
[]
split_0_train_29489
split_0_train_29489
[ { "id": "split_0_train_29489_passage", "type": "progene_text", "text": [ "These differences correlate negatively with the duration of calls ." ], "offsets": [ [ 0, 67 ] ] } ]
[]
[]
[]
[]
split_0_train_29490
split_0_train_29490
[ { "id": "split_0_train_29490_passage", "type": "progene_text", "text": [ "We suggest that morphological adaptations in some bats may facilitate the economic production of echolocation calls at rest ." ], "offsets": [ [ 0, 125 ] ] } ]
[]
[]
[]
[]
split_0_train_29491
split_0_train_29491
[ { "id": "split_0_train_29491_passage", "type": "progene_text", "text": [ "High serum concentrations of dimeric inhibins A and B in normal newborn girls ." ], "offsets": [ [ 0, 79 ] ] } ]
[ { "id": "split_0_train_47715_entity", "type": "progene_text", "text": [ "inhibins A and B" ], "offsets": [ [ 37, 53 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29492
split_0_train_29492
[ { "id": "split_0_train_29492_passage", "type": "progene_text", "text": [ "OBJECTIVE :" ], "offsets": [ [ 0, 11 ] ] } ]
[]
[]
[]
[]
split_0_train_29493
split_0_train_29493
[ { "id": "split_0_train_29493_passage", "type": "progene_text", "text": [ "To establish the serum pattern of dimeric inhibins in normal girls during the newborn period and to examine its relationship with the postnatal gonadotropic surge ." ], "offsets": [ [ 0, 164 ] ] } ]
[ { "id": "split_0_train_47716_entity", "type": "progene_text", "text": [ "inhibins" ], "offsets": [ [ 42, 50 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_29494
split_0_train_29494
[ { "id": "split_0_train_29494_passage", "type": "progene_text", "text": [ "DESIGN :" ], "offsets": [ [ 0, 8 ] ] } ]
[]
[]
[]
[]
split_0_train_29495
split_0_train_29495
[ { "id": "split_0_train_29495_passage", "type": "progene_text", "text": [ "Retrospective study ." ], "offsets": [ [ 0, 21 ] ] } ]
[]
[]
[]
[]
split_0_train_29496
split_0_train_29496
[ { "id": "split_0_train_29496_passage", "type": "progene_text", "text": [ "SETTING ; Division of endocrinology of a children 's hospital ." ], "offsets": [ [ 0, 63 ] ] } ]
[]
[]
[]
[]
split_0_train_29497
split_0_train_29497
[ { "id": "split_0_train_29497_passage", "type": "progene_text", "text": [ "PATIENT(S) :" ], "offsets": [ [ 0, 12 ] ] } ]
[]
[]
[]
[]
split_0_train_29498
split_0_train_29498
[ { "id": "split_0_train_29498_passage", "type": "progene_text", "text": [ "Thirty-one girls 4 to 65 days of age ." ], "offsets": [ [ 0, 38 ] ] } ]
[]
[]
[]
[]
split_0_train_29499
split_0_train_29499
[ { "id": "split_0_train_29499_passage", "type": "progene_text", "text": [ "MAIN OUTCOME MEASURE(S) :" ], "offsets": [ [ 0, 25 ] ] } ]
[]
[]
[]
[]