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split_0_train_5300
split_0_train_5300
[ { "id": "split_0_train_5300_passage", "type": "progene_text", "text": [ "A high dose of amifostine , 1,000 mg , was given as a 5 - min i.v. infusion before each of the 12 consecutive fractions of RT ( 4 x 3.5 Gy / fraction and 8 x 4 Gy / fraction , 1 fraction / day , 5 fractions / week ) ." ], "offsets": [ [ 0, 217 ] ] } ]
[]
[]
[]
[]
split_0_train_5301
split_0_train_5301
[ { "id": "split_0_train_5301_passage", "type": "progene_text", "text": [ "The breast or chest wall , as well as supraclavicular and axillary area , was included in the RT fields ." ], "offsets": [ [ 0, 105 ] ] } ]
[]
[]
[]
[]
split_0_train_5302
split_0_train_5302
[ { "id": "split_0_train_5302_passage", "type": "progene_text", "text": [ "The follow - up of patients ranged from 18 to 42 months ( median , 28 months ) ." ], "offsets": [ [ 0, 80 ] ] } ]
[]
[]
[]
[]
split_0_train_5303
split_0_train_5303
[ { "id": "split_0_train_5303_passage", "type": "progene_text", "text": [ "Alkaline phosphatase ( AF ) expression was assessed immunohistochemically in normal and cancerous breast tissues ." ], "offsets": [ [ 0, 114 ] ] } ]
[ { "id": "split_0_train_8333_entity", "type": "progene_text", "text": [ "Alkaline phosphatase" ], "offsets": [ [ 0, 20 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5304
split_0_train_5304
[ { "id": "split_0_train_5304_passage", "type": "progene_text", "text": [ "RESULTS :" ], "offsets": [ [ 0, 9 ] ] } ]
[]
[]
[]
[]
split_0_train_5305
split_0_train_5305
[ { "id": "split_0_train_5305_passage", "type": "progene_text", "text": [ "Ninety-two percent of patients successfully completed the regimen , the only side effects being mild nausea and asthenia ." ], "offsets": [ [ 0, 122 ] ] } ]
[]
[]
[]
[]
split_0_train_5306
split_0_train_5306
[ { "id": "split_0_train_5306_passage", "type": "progene_text", "text": [ "In 7 % of patients , amifostine was interrupted because of a rash / fever reaction ." ], "offsets": [ [ 0, 84 ] ] } ]
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[]
[]
[]
split_0_train_5307
split_0_train_5307
[ { "id": "split_0_train_5307_passage", "type": "progene_text", "text": [ "A dramatic reduction in acute skin toxicity was noted ( p < 0.0001 ) ." ], "offsets": [ [ 0, 70 ] ] } ]
[]
[]
[]
[]
split_0_train_5308
split_0_train_5308
[ { "id": "split_0_train_5308_passage", "type": "progene_text", "text": [ "Acute pneumonitis , as well as late toxicity in breast , chest wall , axillary , and lung tissue , was lower with the HypoARC regimen , although not significantly , than with the standard fractionation regimen used to treat two matched control cohorts ." ], "offsets": [ [ 0, 253 ] ] } ]
[]
[]
[]
[]
split_0_train_5309
split_0_train_5309
[ { "id": "split_0_train_5309_passage", "type": "progene_text", "text": [ "Both HypoARC and standard RT significantly reduce the local relapse rate ( p < 0.0001 ) , although the local relapse - free and overall survival times were marginally better for the HypoARC group of patients ( p > 0.09 ) ." ], "offsets": [ [ 0, 222 ] ] } ]
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[]
[]
[]
split_0_train_5310
split_0_train_5310
[ { "id": "split_0_train_5310_passage", "type": "progene_text", "text": [ "AF showed a mixed nuclear / cytoplasmic pattern of expression in the epithelial , endothelial , and stromal component of the normal breast and benign lesions , whereas an impressive loss of AF expression was noted in in situ and invasive breast cancer and tumoral stroma ." ], "offsets": [ [ 0, 272 ] ] } ]
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[]
[]
[]
split_0_train_5311
split_0_train_5311
[ { "id": "split_0_train_5311_passage", "type": "progene_text", "text": [ "CONCLUSIONS :" ], "offsets": [ [ 0, 13 ] ] } ]
[]
[]
[]
[]
split_0_train_5312
split_0_train_5312
[ { "id": "split_0_train_5312_passage", "type": "progene_text", "text": [ "The HypoARC regimen is convenient for both patients and radiotherapy departments ." ], "offsets": [ [ 0, 82 ] ] } ]
[]
[]
[]
[]
split_0_train_5313
split_0_train_5313
[ { "id": "split_0_train_5313_passage", "type": "progene_text", "text": [ "The regimen is well tolerated and shows a significantly better profile in terms of early toxicity ; a reduced rate of late sequel may be expected ." ], "offsets": [ [ 0, 147 ] ] } ]
[]
[]
[]
[]
split_0_train_5314
split_0_train_5314
[ { "id": "split_0_train_5314_passage", "type": "progene_text", "text": [ "The local relapse rate is as low as that expected from conventional RT ." ], "offsets": [ [ 0, 72 ] ] } ]
[]
[]
[]
[]
split_0_train_5315
split_0_train_5315
[ { "id": "split_0_train_5315_passage", "type": "progene_text", "text": [ "The absence of AF expression in cancer cells and tumoral stroma is probably a major reason for the selective protection of normal breast tissue by amifostine ." ], "offsets": [ [ 0, 159 ] ] } ]
[]
[]
[]
[]
split_0_train_5316
split_0_train_5316
[ { "id": "split_0_train_5316_passage", "type": "progene_text", "text": [ "Role of cyclin - dependent kinase inhibitors in the growth arrest at senescence in human prostate epithelial and uroepithelial cells ." ], "offsets": [ [ 0, 134 ] ] } ]
[ { "id": "split_0_train_8334_entity", "type": "progene_text", "text": [ "cyclin - dependent kinase" ], "offsets": [ [ 8, 33 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5317
split_0_train_5317
[ { "id": "split_0_train_5317_passage", "type": "progene_text", "text": [ "Cellular senescence has been proposed to be an in vitro and in vivo block that cells must overcome in order to immortalize and become tumorigenic ." ], "offsets": [ [ 0, 147 ] ] } ]
[]
[]
[]
[]
split_0_train_5318
split_0_train_5318
[ { "id": "split_0_train_5318_passage", "type": "progene_text", "text": [ "To characterize these pathways , we focused on changes in the cyclin - dependent kinase inhibitors and their binding partners that underlie the cell cycle arrest at senescence ." ], "offsets": [ [ 0, 177 ] ] } ]
[ { "id": "split_0_train_8335_entity", "type": "progene_text", "text": [ "cyclin - dependent kinase" ], "offsets": [ [ 62, 87 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5319
split_0_train_5319
[ { "id": "split_0_train_5319_passage", "type": "progene_text", "text": [ "As a model , we utilized normal human prostate epithelial cell ( HPEC ) and human uroepithelial cell ( HUC ) cultures ." ], "offsets": [ [ 0, 119 ] ] } ]
[]
[]
[]
[]
split_0_train_5320
split_0_train_5320
[ { "id": "split_0_train_5320_passage", "type": "progene_text", "text": [ "After 30 - 40 population doublings cells became growth - arrested in G0/1 with a threefold decrease in Cdk2 - associated activity , a point defined as pre - senescence ." ], "offsets": [ [ 0, 169 ] ] } ]
[ { "id": "split_0_train_8336_entity", "type": "progene_text", "text": [ "G0/1" ], "offsets": [ [ 69, 73 ] ], "normalized": [] }, { "id": "split_0_train_8337_entity", "type": "progene_text", "text": [ "Cdk2" ], "offsets": [ [ 103, 107 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5321
split_0_train_5321
[ { "id": "split_0_train_5321_passage", "type": "progene_text", "text": [ "Temporally following this growth arrest , the cells develop a senescence morphology and express senescence - associated beta-galactosidase ( SA-beta-gal ) ." ], "offsets": [ [ 0, 156 ] ] } ]
[ { "id": "split_0_train_8338_entity", "type": "progene_text", "text": [ "beta-galactosidase" ], "offsets": [ [ 120, 138 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5322
split_0_train_5322
[ { "id": "split_0_train_5322_passage", "type": "progene_text", "text": [ "Levels of p16 ( INK4a ) and p57 ( KIP2 ) rise in HUCs during progressive passages , whereas only p16 increases in HPEC cultures ." ], "offsets": [ [ 0, 129 ] ] } ]
[ { "id": "split_0_train_8339_entity", "type": "progene_text", "text": [ "p16 ( INK4a )" ], "offsets": [ [ 10, 23 ] ], "normalized": [] }, { "id": "split_0_train_8340_entity", "type": "progene_text", "text": [ "p57 ( KIP2 )" ], "offsets": [ [ 28, 40 ] ], "normalized": [] }, { "id": "split_0_train_8341_entity", "type": "progene_text", "text": [ "p16" ], "offsets": [ [ 97, 100 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5323
split_0_train_5323
[ { "id": "split_0_train_5323_passage", "type": "progene_text", "text": [ "The induced expression of p57 , similar to p16 , produces a senescent - like phenotype ." ], "offsets": [ [ 0, 88 ] ] } ]
[ { "id": "split_0_train_8342_entity", "type": "progene_text", "text": [ "p57" ], "offsets": [ [ 26, 29 ] ], "normalized": [] }, { "id": "split_0_train_8343_entity", "type": "progene_text", "text": [ "p16" ], "offsets": [ [ 43, 46 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5324
split_0_train_5324
[ { "id": "split_0_train_5324_passage", "type": "progene_text", "text": [ "pRB , cyclin D , p19 ( INK4d ) and p27 ( KIP1 ) decrease in both cell types ." ], "offsets": [ [ 0, 77 ] ] } ]
[ { "id": "split_0_train_8344_entity", "type": "progene_text", "text": [ "pRB" ], "offsets": [ [ 0, 3 ] ], "normalized": [] }, { "id": "split_0_train_8345_entity", "type": "progene_text", "text": [ "cyclin D" ], "offsets": [ [ 6, 14 ] ], "normalized": [] }, { "id": "split_0_train_8346_entity", "type": "progene_text", "text": [ "p19 ( INK4d )" ], "offsets": [ [ 17, 30 ] ], "normalized": [] }, { "id": "split_0_train_8347_entity", "type": "progene_text", "text": [ "p27 ( KIP1 )" ], "offsets": [ [ 35, 47 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5325
split_0_train_5325
[ { "id": "split_0_train_5325_passage", "type": "progene_text", "text": [ "We find that p53 , p21 ( CIP1 ) and p15 ( INK4b ) are transiently elevated in HPECs and HUCs at the pre - senescent growth arrest , then return to low proliferating levels at terminal senescence ." ], "offsets": [ [ 0, 196 ] ] } ]
[ { "id": "split_0_train_8348_entity", "type": "progene_text", "text": [ "p53" ], "offsets": [ [ 13, 16 ] ], "normalized": [] }, { "id": "split_0_train_8349_entity", "type": "progene_text", "text": [ "p21 ( CIP1 )" ], "offsets": [ [ 19, 31 ] ], "normalized": [] }, { "id": "split_0_train_8350_entity", "type": "progene_text", "text": [ "p15 ( INK4b )" ], "offsets": [ [ 36, 49 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5326
split_0_train_5326
[ { "id": "split_0_train_5326_passage", "type": "progene_text", "text": [ "Analysis of p53 , p21 ( CIP1 ) , p15 ( INK4b ) , p16 ( INK4a ) , and p57 ( KIP2 ) reveals altered expression in immortalized , non - tumorigenic HPV16 E6 and E7 prostate lines and in tumorigenic prostate cancer cells ." ], "offsets": [ [ 0, 218 ] ] } ]
[ { "id": "split_0_train_8351_entity", "type": "progene_text", "text": [ "p53" ], "offsets": [ [ 12, 15 ] ], "normalized": [] }, { "id": "split_0_train_8352_entity", "type": "progene_text", "text": [ "p21 ( CIP1 )" ], "offsets": [ [ 18, 30 ] ], "normalized": [] }, { "id": "split_0_train_8353_entity", "type": "progene_text", "text": [ "p15 ( INK4b )" ], "offsets": [ [ 33, 46 ] ], "normalized": [] }, { "id": "split_0_train_8354_entity", "type": "progene_text", "text": [ "p16 ( INK4a )" ], "offsets": [ [ 49, 62 ] ], "normalized": [] }, { "id": "split_0_train_8355_entity", "type": "progene_text", "text": [ "p57 ( KIP2 )" ], "offsets": [ [ 69, 81 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5327
split_0_train_5327
[ { "id": "split_0_train_5327_passage", "type": "progene_text", "text": [ "These results indicate : (i) the existence of a subset of growth inhibiting genes elevated at the onset of the senescence , (ii) a distinct class of genes involved in the maintenance of senescence , and (iii) the frequent inactivation of these pathways during immortalization ." ], "offsets": [ [ 0, 277 ] ] } ]
[]
[]
[]
[]
split_0_train_5328
split_0_train_5328
[ { "id": "split_0_train_5328_passage", "type": "progene_text", "text": [ "Contribution of body surface mapping to clinical outcome after surgical ablation of postinfarction ventricular tachycardia ." ], "offsets": [ [ 0, 124 ] ] } ]
[]
[]
[]
[]
split_0_train_5329
split_0_train_5329
[ { "id": "split_0_train_5329_passage", "type": "progene_text", "text": [ "This article investigates the influence of body surface mapping on outcome of ventricular antiarrhythmic surgery ." ], "offsets": [ [ 0, 114 ] ] } ]
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[]
[]
[]
split_0_train_5330
split_0_train_5330
[ { "id": "split_0_train_5330_passage", "type": "progene_text", "text": [ "Preoperative mapping is advocated to optimize map - guided antiarrhythmic surgery of postinfarction ventricular tachycardia ." ], "offsets": [ [ 0, 125 ] ] } ]
[]
[]
[]
[]
split_0_train_5331
split_0_train_5331
[ { "id": "split_0_train_5331_passage", "type": "progene_text", "text": [ "We sequentially analyzed the results of catheter activation sequence mapping , body surface mapping , and intraoperative multielectrode mapping in 54 patients and made a comparison with 30 control patients ( group B ) in whom catheter activation sequence mapping was omitted ." ], "offsets": [ [ 0, 276 ] ] } ]
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[]
[]
[]
split_0_train_5332
split_0_train_5332
[ { "id": "split_0_train_5332_passage", "type": "progene_text", "text": [ "Endpoints were actuarial survival , freedom of arrhythmia , and comparability of the localisation of sites of ventricular tachycardia origin ." ], "offsets": [ [ 0, 142 ] ] } ]
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[]
[]
[]
split_0_train_5333
split_0_train_5333
[ { "id": "split_0_train_5333_passage", "type": "progene_text", "text": [ "A total of 128 morphologically different monomorphic sustained ventricular tachycardias were mapped in group A ." ], "offsets": [ [ 0, 112 ] ] } ]
[]
[]
[]
[]
split_0_train_5334
split_0_train_5334
[ { "id": "split_0_train_5334_passage", "type": "progene_text", "text": [ "In group A , 87 ventricular tachycardias were mapped preoperatively with body surface mapping and 30 ventricular tachycardias with catheter activation sequence mapping ." ], "offsets": [ [ 0, 169 ] ] } ]
[]
[]
[]
[]
split_0_train_5335
split_0_train_5335
[ { "id": "split_0_train_5335_passage", "type": "progene_text", "text": [ "In 19 of 24 ventricular tachycardias ( 79 % ) that were localized with both mapping methods the ventricular tachycardia exit site was similar ." ], "offsets": [ [ 0, 143 ] ] } ]
[]
[]
[]
[]
split_0_train_5336
split_0_train_5336
[ { "id": "split_0_train_5336_passage", "type": "progene_text", "text": [ "In - hospital death was 1 of 85 ( 1.2 % ) ." ], "offsets": [ [ 0, 43 ] ] } ]
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[]
[]
[]
split_0_train_5337
split_0_train_5337
[ { "id": "split_0_train_5337_passage", "type": "progene_text", "text": [ "Actuarial freedom from ventricular arrhythmias at 4 - year follow - up was 74.1 +/- 6.0 % in group A vs. 90.0 +/- 5.5 % in group B ( P = .10 ) ." ], "offsets": [ [ 0, 144 ] ] } ]
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[]
[]
[]
split_0_train_5338
split_0_train_5338
[ { "id": "split_0_train_5338_passage", "type": "progene_text", "text": [ "In group A 14 of 54 patients died ( 29.6 % ) , whereas 4 of 30 patients ( 13.3 % ) died in group B ( P = .09 ) ." ], "offsets": [ [ 0, 112 ] ] } ]
[]
[]
[]
[]
split_0_train_5339
split_0_train_5339
[ { "id": "split_0_train_5339_passage", "type": "progene_text", "text": [ "Arrhythmia freedom and survival is as good in patients mapped with body surface mapping only as in patients mapped with body surface mapping and catheter activation sequence mapping ." ], "offsets": [ [ 0, 183 ] ] } ]
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[]
[]
[]
split_0_train_5340
split_0_train_5340
[ { "id": "split_0_train_5340_passage", "type": "progene_text", "text": [ "Genetic profile of 22 pancreatic carcinoma cell lines ." ], "offsets": [ [ 0, 55 ] ] } ]
[]
[]
[]
[]
split_0_train_5341
split_0_train_5341
[ { "id": "split_0_train_5341_passage", "type": "progene_text", "text": [ "Analysis of K-ras , p53 , p16 and DPC4 / Smad4 ." ], "offsets": [ [ 0, 48 ] ] } ]
[ { "id": "split_0_train_8356_entity", "type": "progene_text", "text": [ "K-ras" ], "offsets": [ [ 12, 17 ] ], "normalized": [] }, { "id": "split_0_train_8357_entity", "type": "progene_text", "text": [ "p53" ], "offsets": [ [ 20, 23 ] ], "normalized": [] }, { "id": "split_0_train_8358_entity", "type": "progene_text", "text": [ "p16" ], "offsets": [ [ 26, 29 ] ], "normalized": [] }, { "id": "split_0_train_8359_entity", "type": "progene_text", "text": [ "DPC4" ], "offsets": [ [ 34, 38 ] ], "normalized": [] }, { "id": "split_0_train_8360_entity", "type": "progene_text", "text": [ "Smad4" ], "offsets": [ [ 41, 46 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5342
split_0_train_5342
[ { "id": "split_0_train_5342_passage", "type": "progene_text", "text": [ "The K-ras , p53 , p16 and DPC4 genes are among those most frequently altered in pancreatic ductal carcinoma ." ], "offsets": [ [ 0, 109 ] ] } ]
[ { "id": "split_0_train_8361_entity", "type": "progene_text", "text": [ "K-ras" ], "offsets": [ [ 4, 9 ] ], "normalized": [] }, { "id": "split_0_train_8362_entity", "type": "progene_text", "text": [ "p53" ], "offsets": [ [ 12, 15 ] ], "normalized": [] }, { "id": "split_0_train_8363_entity", "type": "progene_text", "text": [ "p16" ], "offsets": [ [ 18, 21 ] ], "normalized": [] }, { "id": "split_0_train_8364_entity", "type": "progene_text", "text": [ "DPC4" ], "offsets": [ [ 26, 30 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5343
split_0_train_5343
[ { "id": "split_0_train_5343_passage", "type": "progene_text", "text": [ "We analyzed 22 cell lines for alterations in these genes by direct sequence analysis and methylation - specific polymerase chain reaction ." ], "offsets": [ [ 0, 139 ] ] } ]
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[]
[]
[]
split_0_train_5344
split_0_train_5344
[ { "id": "split_0_train_5344_passage", "type": "progene_text", "text": [ "These cell lines showed mutations in K-ras and p53 at frequencies of 91 % and 95 % , respectively ." ], "offsets": [ [ 0, 99 ] ] } ]
[ { "id": "split_0_train_8365_entity", "type": "progene_text", "text": [ "K-ras" ], "offsets": [ [ 37, 42 ] ], "normalized": [] }, { "id": "split_0_train_8366_entity", "type": "progene_text", "text": [ "p53" ], "offsets": [ [ 47, 50 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5345
split_0_train_5345
[ { "id": "split_0_train_5345_passage", "type": "progene_text", "text": [ "Alterations in p16INK4a were found in all cases and included nine homozygous deletions , seven mutations and promoter methylation in six cases ." ], "offsets": [ [ 0, 144 ] ] } ]
[ { "id": "split_0_train_8367_entity", "type": "progene_text", "text": [ "p16INK4a" ], "offsets": [ [ 15, 23 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5346
split_0_train_5346
[ { "id": "split_0_train_5346_passage", "type": "progene_text", "text": [ "Eight cell lines ( 36 % ) had an alteration of DPC4 , including one mutation and seven homozygous deletions ." ], "offsets": [ [ 0, 109 ] ] } ]
[ { "id": "split_0_train_8368_entity", "type": "progene_text", "text": [ "DPC4" ], "offsets": [ [ 47, 51 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5347
split_0_train_5347
[ { "id": "split_0_train_5347_passage", "type": "progene_text", "text": [ "The most typical mutational profile involved K-ras , p53 , and p16INK4a , concurrently aberrated in 20 cases ( 91 % ) ." ], "offsets": [ [ 0, 119 ] ] } ]
[ { "id": "split_0_train_8369_entity", "type": "progene_text", "text": [ "K-ras" ], "offsets": [ [ 45, 50 ] ], "normalized": [] }, { "id": "split_0_train_8370_entity", "type": "progene_text", "text": [ "p53" ], "offsets": [ [ 53, 56 ] ], "normalized": [] }, { "id": "split_0_train_8371_entity", "type": "progene_text", "text": [ "p16INK4a" ], "offsets": [ [ 63, 71 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5348
split_0_train_5348
[ { "id": "split_0_train_5348_passage", "type": "progene_text", "text": [ "Eight cell lines had alterations in all four genes ." ], "offsets": [ [ 0, 52 ] ] } ]
[]
[]
[]
[]
split_0_train_5349
split_0_train_5349
[ { "id": "split_0_train_5349_passage", "type": "progene_text", "text": [ "Inactivation of DPC4 was always accompanied by alteration of all of the other three genes ." ], "offsets": [ [ 0, 91 ] ] } ]
[ { "id": "split_0_train_8372_entity", "type": "progene_text", "text": [ "DPC4" ], "offsets": [ [ 16, 20 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5350
split_0_train_5350
[ { "id": "split_0_train_5350_passage", "type": "progene_text", "text": [ "This comprehensive data regarding the cumulative genetic alterations in pancreatic carcinoma cell lines will be of great value for studies involving drug sensitivity or resistance that may be associated with inactivation of a particular gene or molecular pathway ." ], "offsets": [ [ 0, 264 ] ] } ]
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[]
[]
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split_0_train_5351
split_0_train_5351
[ { "id": "split_0_train_5351_passage", "type": "progene_text", "text": [ "Rapsyn mutations in humans cause endplate acetylcholine - receptor deficiency and myasthenic syndrome ." ], "offsets": [ [ 0, 103 ] ] } ]
[ { "id": "split_0_train_8373_entity", "type": "progene_text", "text": [ "Rapsyn" ], "offsets": [ [ 0, 6 ] ], "normalized": [] }, { "id": "split_0_train_8374_entity", "type": "progene_text", "text": [ "acetylcholine - receptor" ], "offsets": [ [ 42, 66 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5352
split_0_train_5352
[ { "id": "split_0_train_5352_passage", "type": "progene_text", "text": [ "Congenital myasthenic syndromes ( CMSs ) stem from genetic defects in endplate ( EP ) - specific presynaptic , synaptic , and postsynaptic proteins ." ], "offsets": [ [ 0, 149 ] ] } ]
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[]
[]
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split_0_train_5353
split_0_train_5353
[ { "id": "split_0_train_5353_passage", "type": "progene_text", "text": [ "The postsynaptic CMSs identified to date stem from a deficiency or kinetic abnormality of the acetylcholine receptor ( AChR ) ." ], "offsets": [ [ 0, 127 ] ] } ]
[ { "id": "split_0_train_8375_entity", "type": "progene_text", "text": [ "acetylcholine receptor" ], "offsets": [ [ 94, 116 ] ], "normalized": [] }, { "id": "split_0_train_8376_entity", "type": "progene_text", "text": [ "AChR" ], "offsets": [ [ 119, 123 ] ], "normalized": [] } ]
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[]
[]
split_0_train_5354
split_0_train_5354
[ { "id": "split_0_train_5354_passage", "type": "progene_text", "text": [ "All CMSs with a kinetic abnormality of AChR , as well as many CMSs with a deficiency of AChR , have been traced to mutations in AChR - subunit genes ." ], "offsets": [ [ 0, 150 ] ] } ]
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[]
[]
split_0_train_5355
split_0_train_5355
[ { "id": "split_0_train_5355_passage", "type": "progene_text", "text": [ "However , in a subset of patients with EP AChR deficiency , the genetic defect has remained elusive ." ], "offsets": [ [ 0, 101 ] ] } ]
[ { "id": "split_0_train_8380_entity", "type": "progene_text", "text": [ "AChR" ], "offsets": [ [ 42, 46 ] ], "normalized": [] } ]
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[]
[]
split_0_train_5356
split_0_train_5356
[ { "id": "split_0_train_5356_passage", "type": "progene_text", "text": [ "Rapsyn , a 43 - kDa postsynaptic protein , plays an essential role in the clustering of AChR at the EP ." ], "offsets": [ [ 0, 104 ] ] } ]
[ { "id": "split_0_train_8381_entity", "type": "progene_text", "text": [ "Rapsyn" ], "offsets": [ [ 0, 6 ] ], "normalized": [] }, { "id": "split_0_train_8382_entity", "type": "progene_text", "text": [ "AChR" ], "offsets": [ [ 88, 92 ] ], "normalized": [] } ]
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[]
[]
split_0_train_5357
split_0_train_5357
[ { "id": "split_0_train_5357_passage", "type": "progene_text", "text": [ "Seven tetratricopeptide repeats ( TPRs ) of rapsyn subserve self - association , a coiled - coil domain binds to AChR , and a RING - H2 domain associates with beta-dystroglycan and links rapsyn to the subsynaptic cytoskeleton ." ], "offsets": [ [ 0, 227 ] ] } ]
[ { "id": "split_0_train_8383_entity", "type": "progene_text", "text": [ "rapsyn" ], "offsets": [ [ 44, 50 ] ], "normalized": [] }, { "id": "split_0_train_8384_entity", "type": "progene_text", "text": [ "AChR" ], "offsets": [ [ 113, 117 ] ], "normalized": [] }, { "id": "split_0_train_8385_entity", "type": "progene_text", "text": [ "beta-dystroglycan" ], "offsets": [ [ 159, 176 ] ], "normalized": [] }, { "id": "split_0_train_8386_entity", "type": "progene_text", "text": [ "rapsyn" ], "offsets": [ [ 187, 193 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5358
split_0_train_5358
[ { "id": "split_0_train_5358_passage", "type": "progene_text", "text": [ "Rapsyn self - association precedes recruitment of AChR to rapsyn clusters ." ], "offsets": [ [ 0, 75 ] ] } ]
[ { "id": "split_0_train_8387_entity", "type": "progene_text", "text": [ "Rapsyn" ], "offsets": [ [ 0, 6 ] ], "normalized": [] }, { "id": "split_0_train_8388_entity", "type": "progene_text", "text": [ "AChR" ], "offsets": [ [ 50, 54 ] ], "normalized": [] }, { "id": "split_0_train_8389_entity", "type": "progene_text", "text": [ "rapsyn" ], "offsets": [ [ 58, 64 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5359
split_0_train_5359
[ { "id": "split_0_train_5359_passage", "type": "progene_text", "text": [ "In four patients with EP AChR deficiency but with no mutations in AChR subunits , we identify three recessive rapsyn mutations : one patient carries L14P in TPR1 and N88K in TPR3 ; two are homozygous for N88K ; and one carries N88K and 553ins5 , which frameshifts in TPR5 ." ], "offsets": [ [ 0, 273 ] ] } ]
[ { "id": "split_0_train_8390_entity", "type": "progene_text", "text": [ "AChR" ], "offsets": [ [ 25, 29 ] ], "normalized": [] }, { "id": "split_0_train_8391_entity", "type": "progene_text", "text": [ "AChR" ], "offsets": [ [ 66, 70 ] ], "normalized": [] }, { "id": "split_0_train_8392_entity", "type": "progene_text", "text": [ "rapsyn" ], "offsets": [ [ 110, 116 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5360
split_0_train_5360
[ { "id": "split_0_train_5360_passage", "type": "progene_text", "text": [ "EP studies in each case show decreased staining for rapsyn and AChR , as well as impaired postsynaptic morphological development ." ], "offsets": [ [ 0, 130 ] ] } ]
[ { "id": "split_0_train_8393_entity", "type": "progene_text", "text": [ "rapsyn" ], "offsets": [ [ 52, 58 ] ], "normalized": [] }, { "id": "split_0_train_8394_entity", "type": "progene_text", "text": [ "AChR" ], "offsets": [ [ 63, 67 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5361
split_0_train_5361
[ { "id": "split_0_train_5361_passage", "type": "progene_text", "text": [ "Expression studies in HEK cells indicate that none of the mutations hinders rapsyn self - association but that all three diminish coclustering of AChR with rapsyn ." ], "offsets": [ [ 0, 164 ] ] } ]
[ { "id": "split_0_train_8395_entity", "type": "progene_text", "text": [ "rapsyn" ], "offsets": [ [ 76, 82 ] ], "normalized": [] }, { "id": "split_0_train_8396_entity", "type": "progene_text", "text": [ "AChR" ], "offsets": [ [ 146, 150 ] ], "normalized": [] }, { "id": "split_0_train_8397_entity", "type": "progene_text", "text": [ "rapsyn" ], "offsets": [ [ 156, 162 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5362
split_0_train_5362
[ { "id": "split_0_train_5362_passage", "type": "progene_text", "text": [ "Physicochemical and biomechanical examination of surfaces of retrieved polyethylene heads from total hip prostheses with rotating polyethylene head system ." ], "offsets": [ [ 0, 156 ] ] } ]
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[]
[]
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split_0_train_5363
split_0_train_5363
[ { "id": "split_0_train_5363_passage", "type": "progene_text", "text": [ "In order to assess whether hydrodynamic lubrication occurs in total hip prostheses with a rotating polyethylene ( PE ) head system ( R-THP ) , several physicochemical , morphological , and biomechanical tests were carried out ." ], "offsets": [ [ 0, 227 ] ] } ]
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[]
[]
[]
split_0_train_5364
split_0_train_5364
[ { "id": "split_0_train_5364_passage", "type": "progene_text", "text": [ "R-THPs have been used in more than 1000 patients since 1970 , and 12 PE heads , retrieved from 10 patients after an average of 24.5 years since total hip arthroplasty ( THA ) , were employed for the tests ." ], "offsets": [ [ 0, 206 ] ] } ]
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[]
[]
[]
split_0_train_5365
split_0_train_5365
[ { "id": "split_0_train_5365_passage", "type": "progene_text", "text": [ "The weight - bearing area of the PE surface was light yellow in color and considerably oxidized , but no wear scars were observed ." ], "offsets": [ [ 0, 131 ] ] } ]
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[]
[]
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split_0_train_5366
split_0_train_5366
[ { "id": "split_0_train_5366_passage", "type": "progene_text", "text": [ "In the non - weight - bearing area , in contrast , discoloration and oxidation were hard to detect ." ], "offsets": [ [ 0, 100 ] ] } ]
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[]
[]
[]
split_0_train_5367
split_0_train_5367
[ { "id": "split_0_train_5367_passage", "type": "progene_text", "text": [ "The weight - bearing surface of the PE head became smoother with time after THA , and the friction coefficient did not differ significantly from that of an unused PE head ." ], "offsets": [ [ 0, 172 ] ] } ]
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[]
[]
[]
split_0_train_5368
split_0_train_5368
[ { "id": "split_0_train_5368_passage", "type": "progene_text", "text": [ "The radial clearance between head and socket decreased at a temperature of 17 degrees C , which is equivalent to the difference between room temperature and the temperature of the human body ." ], "offsets": [ [ 0, 192 ] ] } ]
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[]
[]
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split_0_train_5369
split_0_train_5369
[ { "id": "split_0_train_5369_passage", "type": "progene_text", "text": [ "Scanning electron microscopy showed a fine undulating pattern , which suggested that hydrodynamic lubrication could occur in the rotating PE head system ." ], "offsets": [ [ 0, 154 ] ] } ]
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[]
[]
[]
split_0_train_5370
split_0_train_5370
[ { "id": "split_0_train_5370_passage", "type": "progene_text", "text": [ "Acinar cells of the pancreas are a target of interleukin-22 ." ], "offsets": [ [ 0, 61 ] ] } ]
[ { "id": "split_0_train_8398_entity", "type": "progene_text", "text": [ "interleukin-22" ], "offsets": [ [ 45, 59 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5371
split_0_train_5371
[ { "id": "split_0_train_5371_passage", "type": "progene_text", "text": [ "Interleukin-22 ( IL-22 ) ( also reported as IL-10 - related T cell - derived inducible factor , IL-TIF ) is a recently identified cytokine found to signal through a receptor comprising the class II cytokine receptor family members IL-10Rbeta / CRF2 - 4 and IL-22R ." ], "offsets": [ [ 0, 265 ] ] } ]
[ { "id": "split_0_train_8399_entity", "type": "progene_text", "text": [ "Interleukin-22" ], "offsets": [ [ 0, 14 ] ], "normalized": [] }, { "id": "split_0_train_8400_entity", "type": "progene_text", "text": [ "IL-22" ], "offsets": [ [ 17, 22 ] ], "normalized": [] }, { "id": "split_0_train_8401_entity", "type": "progene_text", "text": [ "IL-10 - related T cell - derived inducible factor" ], "offsets": [ [ 44, 93 ] ], "normalized": [] }, { "id": "split_0_train_8402_entity", "type": "progene_text", "text": [ "IL-TIF" ], "offsets": [ [ 96, 102 ] ], "normalized": [] }, { "id": "split_0_train_8403_entity", "type": "progene_text", "text": [ "cytokine" ], "offsets": [ [ 130, 138 ] ], "normalized": [] }, { "id": "split_0_train_8404_entity", "type": "progene_text", "text": [ "class II cytokine receptor family" ], "offsets": [ [ 189, 222 ] ], "normalized": [] }, { "id": "split_0_train_8405_entity", "type": "progene_text", "text": [ "IL-10Rbeta" ], "offsets": [ [ 231, 241 ] ], "normalized": [] }, { "id": "split_0_train_8406_entity", "type": "progene_text", "text": [ "CRF2 - 4" ], "offsets": [ [ 244, 252 ] ], "normalized": [] }, { "id": "split_0_train_8407_entity", "type": "progene_text", "text": [ "IL-22R" ], "offsets": [ [ 257, 263 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5372
split_0_train_5372
[ { "id": "split_0_train_5372_passage", "type": "progene_text", "text": [ "Previous work has established that IL-10Rbeta , also a component of the IL10R complex , exhibits a broad distribution of mRNA expression ." ], "offsets": [ [ 0, 138 ] ] } ]
[ { "id": "split_0_train_8408_entity", "type": "progene_text", "text": [ "IL-10Rbeta" ], "offsets": [ [ 35, 45 ] ], "normalized": [] }, { "id": "split_0_train_8409_entity", "type": "progene_text", "text": [ "IL10R" ], "offsets": [ [ 72, 77 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5373
split_0_train_5373
[ { "id": "split_0_train_5373_passage", "type": "progene_text", "text": [ "Here , we observe that IL-22R exhibits a restricted expression pattern , with highest levels of mRNA expression in pancreas and detectable expression in multiple other tissues , particularly liver , small intestine , colon , and kidney ." ], "offsets": [ [ 0, 237 ] ] } ]
[ { "id": "split_0_train_8410_entity", "type": "progene_text", "text": [ "IL-22R" ], "offsets": [ [ 23, 29 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5374
split_0_train_5374
[ { "id": "split_0_train_5374_passage", "type": "progene_text", "text": [ "We find that isolated primary pancreatic acinar cells and the acinar cell line 266 - 6 respond to IL-22 with activation of Stat3 and changes in gene transcription ." ], "offsets": [ [ 0, 164 ] ] } ]
[ { "id": "split_0_train_8411_entity", "type": "progene_text", "text": [ "IL-22" ], "offsets": [ [ 98, 103 ] ], "normalized": [] }, { "id": "split_0_train_8412_entity", "type": "progene_text", "text": [ "Stat3" ], "offsets": [ [ 123, 128 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5375
split_0_train_5375
[ { "id": "split_0_train_5375_passage", "type": "progene_text", "text": [ "IL-22 mediates robust induction of mRNA for pancreatitis - associated protein ( PAP1 ) / Reg2 and osteopontin ( OPN ) ." ], "offsets": [ [ 0, 119 ] ] } ]
[ { "id": "split_0_train_8413_entity", "type": "progene_text", "text": [ "IL-22" ], "offsets": [ [ 0, 5 ] ], "normalized": [] }, { "id": "split_0_train_8414_entity", "type": "progene_text", "text": [ "pancreatitis - associated protein" ], "offsets": [ [ 44, 77 ] ], "normalized": [] }, { "id": "split_0_train_8415_entity", "type": "progene_text", "text": [ "PAP1" ], "offsets": [ [ 80, 84 ] ], "normalized": [] }, { "id": "split_0_train_8416_entity", "type": "progene_text", "text": [ "Reg2" ], "offsets": [ [ 89, 93 ] ], "normalized": [] }, { "id": "split_0_train_8417_entity", "type": "progene_text", "text": [ "osteopontin" ], "offsets": [ [ 98, 109 ] ], "normalized": [] }, { "id": "split_0_train_8418_entity", "type": "progene_text", "text": [ "OPN" ], "offsets": [ [ 112, 115 ] ], "normalized": [] } ]
[]
[]
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split_0_train_5376
split_0_train_5376
[ { "id": "split_0_train_5376_passage", "type": "progene_text", "text": [ "PAP1 is a secreted protein related to the Reg family of trophic factors and was initially characterized as a protein elevated in pancreatitis ." ], "offsets": [ [ 0, 143 ] ] } ]
[ { "id": "split_0_train_8419_entity", "type": "progene_text", "text": [ "PAP1" ], "offsets": [ [ 0, 4 ] ], "normalized": [] }, { "id": "split_0_train_8420_entity", "type": "progene_text", "text": [ "Reg family" ], "offsets": [ [ 42, 52 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5377
split_0_train_5377
[ { "id": "split_0_train_5377_passage", "type": "progene_text", "text": [ "In vivo injection of IL-22 resulted in rapid induction of PAP1 in pancreas , a response not observed in mice deficient in IL-10Rbeta ." ], "offsets": [ [ 0, 134 ] ] } ]
[ { "id": "split_0_train_8421_entity", "type": "progene_text", "text": [ "IL-22" ], "offsets": [ [ 21, 26 ] ], "normalized": [] }, { "id": "split_0_train_8422_entity", "type": "progene_text", "text": [ "PAP1" ], "offsets": [ [ 58, 62 ] ], "normalized": [] }, { "id": "split_0_train_8423_entity", "type": "progene_text", "text": [ "IL-10Rbeta" ], "offsets": [ [ 122, 132 ] ], "normalized": [] } ]
[]
[]
[]
split_0_train_5378
split_0_train_5378
[ { "id": "split_0_train_5378_passage", "type": "progene_text", "text": [ "These results support the conclusion that IL-10Rbeta is a required common component of both the IL-10 and IL-22 receptors and suggest that IL-22 may play a role in the immune response in pancreas ." ], "offsets": [ [ 0, 197 ] ] } ]
[ { "id": "split_0_train_8424_entity", "type": "progene_text", "text": [ "IL-10Rbeta" ], "offsets": [ [ 42, 52 ] ], "normalized": [] }, { "id": "split_0_train_8425_entity", "type": "progene_text", "text": [ "IL-10 and IL-22 receptors" ], "offsets": [ [ 96, 121 ] ], "normalized": [] }, { "id": "split_0_train_8426_entity", "type": "progene_text", "text": [ "IL-22" ], "offsets": [ [ 139, 144 ] ], "normalized": [] } ]
[]
[]
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split_0_train_5379
split_0_train_5379
[ { "id": "split_0_train_5379_passage", "type": "progene_text", "text": [ "Relationships between diffusion tensor and q - space MRI ." ], "offsets": [ [ 0, 58 ] ] } ]
[]
[]
[]
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split_0_train_5380
split_0_train_5380
[ { "id": "split_0_train_5380_passage", "type": "progene_text", "text": [ "Fundamental relationships between diffusion tensor ( DT ) and 3D q - space MRI are derived which establish conditions when these two complementary MR methods are equivalent ." ], "offsets": [ [ 0, 174 ] ] } ]
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[]
[]
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split_0_train_5381
split_0_train_5381
[ { "id": "split_0_train_5381_passage", "type": "progene_text", "text": [ "It is shown that the displacement distribution measured by q - space MRI in both the large displacement ( i.e. , large r ) and the long - wavelength ( i.e. , small q ) limits is the same 3D Gaussian displacement distribution assumed in DT-MRI ." ], "offsets": [ [ 0, 244 ] ] } ]
[]
[]
[]
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split_0_train_5382
split_0_train_5382
[ { "id": "split_0_train_5382_passage", "type": "progene_text", "text": [ "In these limiting cases , q - space MR yields a dispersion tensor that is identical to the effective DT , D , measured in DT-MRI ." ], "offsets": [ [ 0, 130 ] ] } ]
[]
[]
[]
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split_0_train_5383
split_0_train_5383
[ { "id": "split_0_train_5383_passage", "type": "progene_text", "text": [ "An experiment is then proposed to measure D using q - space methods ." ], "offsets": [ [ 0, 69 ] ] } ]
[]
[]
[]
[]
split_0_train_5384
split_0_train_5384
[ { "id": "split_0_train_5384_passage", "type": "progene_text", "text": [ "These findings establish that the effective DT , measured in DT-MRI , characterizes molecule motions on a coarse length - scale ." ], "offsets": [ [ 0, 129 ] ] } ]
[]
[]
[]
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split_0_train_5385
split_0_train_5385
[ { "id": "split_0_train_5385_passage", "type": "progene_text", "text": [ "Finally , the feasibility of and requirements for performing 3D q - space MRI on a clinical scanner are considered ." ], "offsets": [ [ 0, 116 ] ] } ]
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[]
[]
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split_0_train_5386
split_0_train_5386
[ { "id": "split_0_train_5386_passage", "type": "progene_text", "text": [ "A word processor optimized for preparing journal articles and student papers ." ], "offsets": [ [ 0, 78 ] ] } ]
[]
[]
[]
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split_0_train_5387
split_0_train_5387
[ { "id": "split_0_train_5387_passage", "type": "progene_text", "text": [ "A new Windows - based word processor for preparing journal articles and student papers is described ." ], "offsets": [ [ 0, 101 ] ] } ]
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[]
[]
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split_0_train_5388
split_0_train_5388
[ { "id": "split_0_train_5388_passage", "type": "progene_text", "text": [ "In addition to standard features found in word processors , the present word processor provides specific help in preparing manuscripts ." ], "offsets": [ [ 0, 136 ] ] } ]
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[]
[]
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split_0_train_5389
split_0_train_5389
[ { "id": "split_0_train_5389_passage", "type": "progene_text", "text": [ "Clicking on \" Reference Help ( APA Form ) \" in the \" File \" menu provides a detailed help system for entering the references in a journal article ." ], "offsets": [ [ 0, 147 ] ] } ]
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[]
[]
[]
split_0_train_5390
split_0_train_5390
[ { "id": "split_0_train_5390_passage", "type": "progene_text", "text": [ "Clicking on \" Examples and Explanations of APA Form \" provides a help system with examples of the various sections of a review article , journal article that has one experiment , or journal article that has two or more experiments ." ], "offsets": [ [ 0, 232 ] ] } ]
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split_0_train_5391
split_0_train_5391
[ { "id": "split_0_train_5391_passage", "type": "progene_text", "text": [ "The word processor can automatically place the manuscript page header and page number at the top of each page using the form required by APA and Psychonomic Society journals ." ], "offsets": [ [ 0, 175 ] ] } ]
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[]
[]
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split_0_train_5392
split_0_train_5392
[ { "id": "split_0_train_5392_passage", "type": "progene_text", "text": [ "The \" APA Form \" submenu of the \" Help \" menu provides detailed information about how the word processor is optimized for preparing articles and papers ." ], "offsets": [ [ 0, 153 ] ] } ]
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[]
[]
[]
split_0_train_5393
split_0_train_5393
[ { "id": "split_0_train_5393_passage", "type": "progene_text", "text": [ "Smallest real difference , a link between reproducibility and responsiveness ." ], "offsets": [ [ 0, 78 ] ] } ]
[]
[]
[]
[]
split_0_train_5394
split_0_train_5394
[ { "id": "split_0_train_5394_passage", "type": "progene_text", "text": [ "The aim of this study is to show the relationship between test - retest reproducibility and responsiveness and to introduce the smallest real difference ( SRD ) approach , using the sickness impact profile ( SIP ) in chronic stroke patients as an example ." ], "offsets": [ [ 0, 256 ] ] } ]
[]
[]
[]
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split_0_train_5395
split_0_train_5395
[ { "id": "split_0_train_5395_passage", "type": "progene_text", "text": [ "Forty chronic stroke patients were interviewed twice by the same examiner , with a 1 - week interval ." ], "offsets": [ [ 0, 102 ] ] } ]
[]
[]
[]
[]
split_0_train_5396
split_0_train_5396
[ { "id": "split_0_train_5396_passage", "type": "progene_text", "text": [ "All patients were interviewed during the qualification period preceding a randomized clinical trial ." ], "offsets": [ [ 0, 101 ] ] } ]
[]
[]
[]
[]
split_0_train_5397
split_0_train_5397
[ { "id": "split_0_train_5397_passage", "type": "progene_text", "text": [ "Test - retest reproducibility has been quantified by the intraclass correlation coefficient ( ICC ) ." ], "offsets": [ [ 0, 101 ] ] } ]
[]
[]
[]
[]
split_0_train_5398
split_0_train_5398
[ { "id": "split_0_train_5398_passage", "type": "progene_text", "text": [ "the standard error of measurement ( SEM ) and the related smallest real difference ( SRD ) ." ], "offsets": [ [ 0, 92 ] ] } ]
[]
[]
[]
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split_0_train_5399
split_0_train_5399
[ { "id": "split_0_train_5399_passage", "type": "progene_text", "text": [ "Responsiveness was defined as the ratio of the clinically relevant change to the SD of the within - stable - subject test - retest differences ." ], "offsets": [ [ 0, 144 ] ] } ]
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