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{ "aliases": null, "definition": "Any vertebra endochondral element that is part of the caudal region of the vertebral column (tail or coccyx).", "id": "CaudalVertebraEndochondralElement", "label": "caudal vertebra endochondral element", "logical_definition": null, "original_id": "UBERON:0018142", "relationships": null }
0
{ "document": "caudal vertebra endochondral element Any vertebra endochondral element that is part of the caudal region of the vertebral column (tail or coccyx). None" }
{ "aliases": null, "definition": "A caudal vertebra endochondral element that is composed primarily of a pre-cartilage condensation.", "id": "CaudalVertebraPreCartilageCondensation", "label": "caudal vertebra pre-cartilage condensation", "logical_definition": null, "original_id": "UBERON:0013504", "relationships": [ { "predicate": "PartOf", "target": "CaudalRegionOfVertebralColumn" } ] }
0
{ "document": "caudal vertebra pre-cartilage condensation A caudal vertebra endochondral element that is composed primarily of a pre-cartilage condensation. [{'predicate': 'PartOf', 'target': 'CaudalRegionOfVertebralColumn'}]" }
{ "aliases": null, "definition": null, "id": "CaudateAtrophy", "label": "Caudate atrophy", "logical_definition": null, "original_id": "HP:0002340", "relationships": [ { "predicate": "subClassOf", "target": "AtrophyDegenerationInvolvingTheCaudateNucleus" } ] }
0
{ "document": "Caudate atrophy None [{'predicate': 'subClassOf', 'target': 'AtrophyDegenerationInvolvingTheCaudateNucleus'}]" }
{ "aliases": null, "definition": "Subcortical nucleus of telecephalic origin consisting of an elongated gray mass lying lateral to and bordering the lateral ventricle. It is divided into a head, body and tail in some species.", "id": "CaudateNucleus", "label": "caudate nucleus", "logical_definition": null, "original_id": "UBERON:0001873", "relationships": [ { "predicate": "PartOf", "target": "CorpusStriatum" }, { "predicate": "PartOf", "target": "Striatum" }, { "predicate": "PartOf", "target": "DorsalStriatum" }, { "predicate": "PartOf", "target": "CaudatePutamen" }, { "predicate": "ContributesToMorphologyOf", "target": "CaudatePutamen" }, { "predicate": "subClassOf", "target": "NeuralNucleus" } ] }
0
{ "document": "caudate nucleus Subcortical nucleus of telecephalic origin consisting of an elongated gray mass lying lateral to and bordering the lateral ventricle. It is divided into a head, body and tail in some species. [{'predicate': 'PartOf', 'target': 'CorpusStriatum'}, {'predicate': 'PartOf', 'target': 'Striatum'}, {'predicate': 'PartOf', 'target': 'DorsalStriatum'}, {'predicate': 'PartOf', 'target': 'CaudatePutamen'}, {'predicate': 'ContributesToMorphologyOf', 'target': 'CaudatePutamen'}, {'predicate': 'subClassOf', 'target': 'NeuralNucleus'}]" }
{ "aliases": null, "definition": "Regional part of telencephalon in some species, e.g., rodent, equivalent to the dorsal striatum (caudate nucleus and putamen). Unlike the dorsal striatum of primates, for example, the caudoputamen is not split into separate nuclei by the fibers of the internal capsule. Rather, the internal capsule splits into fiber bundles which course through the structure.", "id": "CaudatePutamen", "label": "caudate-putamen", "logical_definition": null, "original_id": "UBERON:0005383", "relationships": [ { "predicate": "PartOf", "target": "DorsalStriatum" }, { "predicate": "HasPart", "target": "CaudateNucleus" }, { "predicate": "HasPart", "target": "Putamen" }, { "predicate": "ContributesToMorphologyOf", "target": "Striatum" }, { "predicate": "ComposedPrimarilyOf", "target": "GrayMatter" }, { "predicate": "subClassOf", "target": "CentralNervousSystemCellPartCluster" } ] }
0
{ "document": "caudate-putamen Regional part of telencephalon in some species, e.g., rodent, equivalent to the dorsal striatum (caudate nucleus and putamen). Unlike the dorsal striatum of primates, for example, the caudoputamen is not split into separate nuclei by the fibers of the internal capsule. Rather, the internal capsule splits into fiber bundles which course through the structure. [{'predicate': 'PartOf', 'target': 'DorsalStriatum'}, {'predicate': 'HasPart', 'target': 'CaudateNucleus'}, {'predicate': 'HasPart', 'target': 'Putamen'}, {'predicate': 'ContributesToMorphologyOf', 'target': 'Striatum'}, {'predicate': 'ComposedPrimarilyOf', 'target': 'GrayMatter'}, {'predicate': 'subClassOf', 'target': 'CentralNervousSystemCellPartCluster'}]" }
{ "aliases": null, "definition": "An anomaly of collagen fibers of the skin that is said to resemble a cauliflower and can be appreciated by electron microscopy.", "id": "CauliflowerDeformityOfDermalCollagenFibrils", "label": "Cauliflower deformity of dermal collagen fibrils", "logical_definition": null, "original_id": "HP:0031519", "relationships": [ { "predicate": "subClassOf", "target": "AbnormalCutaneousCollagenFibrilMorphology" } ] }
0
{ "document": "Cauliflower deformity of dermal collagen fibrils An anomaly of collagen fibers of the skin that is said to resemble a cauliflower and can be appreciated by electron microscopy. [{'predicate': 'subClassOf', 'target': 'AbnormalCutaneousCollagenFibrilMorphology'}]" }
{ "aliases": null, "definition": "A relationship between a material entity and a process where the material entity has some causal role that influences the process", "id": "CausalAgentInProcess", "label": "causal agent in process", "logical_definition": null, "original_id": "RO:0002500", "relationships": [ { "predicate": "subPropertyOf", "target": "CausalRelationBetweenMaterialEntityAndAProcess" }, { "predicate": "owl:inverseOf", "target": "ProcessHasCausalAgent" } ] }
0
{ "document": "causal agent in process A relationship between a material entity and a process where the material entity has some causal role that influences the process [{'predicate': 'subPropertyOf', 'target': 'CausalRelationBetweenMaterialEntityAndAProcess'}, {'predicate': 'owl:inverseOf', 'target': 'ProcessHasCausalAgent'}]" }
{ "aliases": null, "definition": null, "id": "CausalRelationBetweenEntities", "label": "causal relation between entities", "logical_definition": null, "original_id": "RO:0002506", "relationships": [ { "predicate": "subPropertyOf", "target": "CausallyRelatedTo" }, { "predicate": "domain", "target": "Continuant" }, { "predicate": "range", "target": "Continuant" } ] }
0
{ "document": "causal relation between entities None [{'predicate': 'subPropertyOf', 'target': 'CausallyRelatedTo'}, {'predicate': 'domain', 'target': 'Continuant'}, {'predicate': 'range', 'target': 'Continuant'}]" }
{ "aliases": null, "definition": "A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity.", "id": "CausalRelationBetweenMaterialEntityAndAProcess", "label": "causal relation between material entity and a process", "logical_definition": null, "original_id": "RO:0002595", "relationships": [ { "predicate": "subPropertyOf", "target": "CausallyRelatedTo" }, { "predicate": "domain", "target": "MaterialEntity" }, { "predicate": "range", "target": "Process" } ] }
0
{ "document": "causal relation between material entity and a process A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity. [{'predicate': 'subPropertyOf', 'target': 'CausallyRelatedTo'}, {'predicate': 'domain', 'target': 'MaterialEntity'}, {'predicate': 'range', 'target': 'Process'}]" }
{ "aliases": null, "definition": "p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q.", "id": "CausalRelationBetweenProcesses", "label": "causal relation between processes", "logical_definition": null, "original_id": "RO:0002501", "relationships": [ { "predicate": "subPropertyOf", "target": "CausallyRelatedTo" }, { "predicate": "domain", "target": "Occurrent" }, { "predicate": "range", "target": "Occurrent" } ] }
0
{ "document": "causal relation between processes p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q. [{'predicate': 'subPropertyOf', 'target': 'CausallyRelatedTo'}, {'predicate': 'domain', 'target': 'Occurrent'}, {'predicate': 'range', 'target': 'Occurrent'}]" }
{ "aliases": null, "definition": "inverse of upstream of", "id": "CausallyDownstreamOf", "label": "causally downstream of", "logical_definition": null, "original_id": "RO:0002404", "relationships": [ { "predicate": "subPropertyOf", "target": "PrecededBy" }, { "predicate": "subPropertyOf", "target": "CausallyDownstreamOfOrWithin" }, { "predicate": "owl:inverseOf", "target": "CausallyUpstreamOf" } ] }
0
{ "document": "causally downstream of inverse of upstream of [{'predicate': 'subPropertyOf', 'target': 'PrecededBy'}, {'predicate': 'subPropertyOf', 'target': 'CausallyDownstreamOfOrWithin'}, {'predicate': 'owl:inverseOf', 'target': 'CausallyUpstreamOf'}]" }
{ "aliases": null, "definition": "inverse of causally upstream of or within", "id": "CausallyDownstreamOfOrWithin", "label": "causally downstream of or within", "logical_definition": null, "original_id": "RO:0002427", "relationships": [ { "predicate": "subPropertyOf", "target": "CausalRelationBetweenProcesses" } ] }
0
{ "document": "causally downstream of or within inverse of causally upstream of or within [{'predicate': 'subPropertyOf', 'target': 'CausalRelationBetweenProcesses'}]" }
{ "aliases": null, "definition": null, "id": "CausallyInfluencedBy", "label": "causally influenced by", "logical_definition": null, "original_id": "RO:0002559", "relationships": [ { "predicate": "subPropertyOf", "target": "CausalRelationBetweenEntities" }, { "predicate": "owl:inverseOf", "target": "CausallyInfluences" } ] }
0
{ "document": "causally influenced by None [{'predicate': 'subPropertyOf', 'target': 'CausalRelationBetweenEntities'}, {'predicate': 'owl:inverseOf', 'target': 'CausallyInfluences'}]" }
{ "aliases": null, "definition": "The entity or characteristic A is causally upstream of the entity or characteristic B, A having an effect on B. An entity corresponds to any biological type of entity as long as a mass is measurable. A characteristic corresponds to a particular specificity of an entity (e.g., phenotype, shape, size).", "id": "CausallyInfluences", "label": "causally influences", "logical_definition": null, "original_id": "RO:0002566", "relationships": [ { "predicate": "subPropertyOf", "target": "CausalRelationBetweenEntities" }, { "predicate": "domain", "target": "Continuant" }, { "predicate": "range", "target": "Continuant" } ] }
0
{ "document": "causally influences The entity or characteristic A is causally upstream of the entity or characteristic B, A having an effect on B. An entity corresponds to any biological type of entity as long as a mass is measurable. A characteristic corresponds to a particular specificity of an entity (e.g., phenotype, shape, size). [{'predicate': 'subPropertyOf', 'target': 'CausalRelationBetweenEntities'}, {'predicate': 'domain', 'target': 'Continuant'}, {'predicate': 'range', 'target': 'Continuant'}]" }
{ "aliases": null, "definition": "relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause.", "id": "CausallyRelatedTo", "label": "causally related to", "logical_definition": null, "original_id": "RO:0002410", "relationships": null }
0
{ "document": "causally related to relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause. None" }
{ "aliases": null, "definition": "p is causally upstream of q iff p is causally related to q, the end of p precedes the end of q, and p is not an occurrent part of q.", "id": "CausallyUpstreamOf", "label": "causally upstream of", "logical_definition": null, "original_id": "RO:0002411", "relationships": [ { "predicate": "subPropertyOf", "target": "Precedes" }, { "predicate": "subPropertyOf", "target": "CausallyUpstreamOfOrWithin" } ] }
0
{ "document": "causally upstream of p is causally upstream of q iff p is causally related to q, the end of p precedes the end of q, and p is not an occurrent part of q. [{'predicate': 'subPropertyOf', 'target': 'Precedes'}, {'predicate': 'subPropertyOf', 'target': 'CausallyUpstreamOfOrWithin'}]" }
{ "aliases": null, "definition": "p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q.", "id": "CausallyUpstreamOfOrWithin", "label": "causally upstream of or within", "logical_definition": null, "original_id": "RO:0002418", "relationships": [ { "predicate": "subPropertyOf", "target": "CausalRelationBetweenProcesses" }, { "predicate": "owl:inverseOf", "target": "CausallyDownstreamOfOrWithin" } ] }
0
{ "document": "causally upstream of or within p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q. [{'predicate': 'subPropertyOf', 'target': 'CausalRelationBetweenProcesses'}, {'predicate': 'owl:inverseOf', 'target': 'CausallyDownstreamOfOrWithin'}]" }
{ "aliases": null, "definition": null, "id": "CausallyUpstreamOfOrWithin_negativeEffect", "label": "causally upstream of or within, negative effect", "logical_definition": null, "original_id": "RO:0004046", "relationships": [ { "predicate": "subPropertyOf", "target": "CausallyUpstreamOfOrWithin" } ] }
0
{ "document": "causally upstream of or within, negative effect None [{'predicate': 'subPropertyOf', 'target': 'CausallyUpstreamOfOrWithin'}]" }
{ "aliases": null, "definition": null, "id": "CausallyUpstreamOfOrWithin_positiveEffect", "label": "causally upstream of or within, positive effect", "logical_definition": null, "original_id": "RO:0004047", "relationships": [ { "predicate": "subPropertyOf", "target": "CausallyUpstreamOfOrWithin" } ] }
0
{ "document": "causally upstream of or within, positive effect None [{'predicate': 'subPropertyOf', 'target': 'CausallyUpstreamOfOrWithin'}]" }
{ "aliases": null, "definition": "p is causally upstream of, negative effect q iff p is casually upstream of q, and the execution of p decreases the execution of q.", "id": "CausallyUpstreamOf_negativeEffect", "label": "causally upstream of, negative effect", "logical_definition": null, "original_id": "RO:0002305", "relationships": [ { "predicate": "subPropertyOf", "target": "CausallyUpstreamOf" }, { "predicate": "subPropertyOf", "target": "CausallyUpstreamOfOrWithin_negativeEffect" } ] }
0
{ "document": "causally upstream of, negative effect p is causally upstream of, negative effect q iff p is casually upstream of q, and the execution of p decreases the execution of q. [{'predicate': 'subPropertyOf', 'target': 'CausallyUpstreamOf'}, {'predicate': 'subPropertyOf', 'target': 'CausallyUpstreamOfOrWithin_negativeEffect'}]" }
{ "aliases": null, "definition": "p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q.", "id": "CausallyUpstreamOf_positiveEffect", "label": "causally upstream of, positive effect", "logical_definition": null, "original_id": "RO:0002304", "relationships": [ { "predicate": "subPropertyOf", "target": "CausallyUpstreamOf" }, { "predicate": "subPropertyOf", "target": "CausallyUpstreamOfOrWithin_positiveEffect" } ] }
0
{ "document": "causally upstream of, positive effect p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q. [{'predicate': 'subPropertyOf', 'target': 'CausallyUpstreamOf'}, {'predicate': 'subPropertyOf', 'target': 'CausallyUpstreamOfOrWithin_positiveEffect'}]" }
{ "aliases": null, "definition": "Cautious gait refers to an excessive degree of age-related changes in walking and fear of falling. The walking difficulties seem out of proportion when considering the patient's actual sensory or motor deficits. The gait appears slow, with a wider base than normal, reduced arm swing bilaterally and a slightly stooped posture. This type of gait change often occurs after the first time a patient has fallen.", "id": "CautiousGait", "label": "Cautious gait", "logical_definition": null, "original_id": "HP:0031953", "relationships": [ { "predicate": "subClassOf", "target": "GaitDisturbance" } ] }
0
{ "document": "Cautious gait Cautious gait refers to an excessive degree of age-related changes in walking and fear of falling. The walking difficulties seem out of proportion when considering the patient's actual sensory or motor deficits. The gait appears slow, with a wider base than normal, reduced arm swing bilaterally and a slightly stooped posture. This type of gait change often occurs after the first time a patient has fallen. [{'predicate': 'subClassOf', 'target': 'GaitDisturbance'}]" }
{ "aliases": null, "definition": "Any of several small branches of the internal carotid artery that supply the trigeminal ganglion and the walls of the cavernous and petrosal sinuses.", "id": "CavernousArtery", "label": "cavernous artery", "logical_definition": null, "original_id": "UBERON:0000457", "relationships": null }
0
{ "document": "cavernous artery Any of several small branches of the internal carotid artery that supply the trigeminal ganglion and the walls of the cavernous and petrosal sinuses. None" }
{ "aliases": null, "definition": "The presence of a cavernous hemangioma. A hemangioma characterized by large endothelial spaces (caverns) is called a cavernous hemangioma.", "id": "CavernousHemangioma", "label": "Cavernous hemangioma", "logical_definition": null, "original_id": "HP:0001048", "relationships": [ { "predicate": "subClassOf", "target": "Hemangioma" } ] }
0
{ "document": "Cavernous hemangioma The presence of a cavernous hemangioma. A hemangioma characterized by large endothelial spaces (caverns) is called a cavernous hemangioma. [{'predicate': 'subClassOf', 'target': 'Hemangioma'}]" }
{ "aliases": null, "definition": null, "id": "CavernousHemangiomaOfTheFace", "label": "Cavernous hemangioma of the face", "logical_definition": null, "original_id": "HP:0007486", "relationships": [ { "predicate": "subClassOf", "target": "CavernousHemangioma" } ] }
0
{ "document": "Cavernous hemangioma of the face None [{'predicate': 'subClassOf', 'target': 'CavernousHemangioma'}]" }
{ "aliases": null, "definition": "The cavernous sinus (or lateral sellar compartment), within the human head, is a large collection of thin-walled veins creating a cavity bordered by the temporal bone of the skull and the sphenoid bone, lateral to the sella turcica.", "id": "CavernousSinus", "label": "cavernous sinus", "logical_definition": null, "original_id": "UBERON:0003712", "relationships": [ { "predicate": "ConnectedTo", "target": "InferiorPetrosalSinus" }, { "predicate": "subClassOf", "target": "VenousDuralSinus" } ] }
0
{ "document": "cavernous sinus The cavernous sinus (or lateral sellar compartment), within the human head, is a large collection of thin-walled veins creating a cavity bordered by the temporal bone of the skull and the sphenoid bone, lateral to the sella turcica. [{'predicate': 'ConnectedTo', 'target': 'InferiorPetrosalSinus'}, {'predicate': 'subClassOf', 'target': 'VenousDuralSinus'}]" }
{ "aliases": null, "definition": "Compound organ that contains one or more macroscopic anatomical spaces.", "id": "CavitatedCompoundOrgan", "label": "cavitated compound organ", "logical_definition": null, "original_id": "UBERON:0000489", "relationships": null }
0
{ "document": "cavitated compound organ Compound organ that contains one or more macroscopic anatomical spaces. None" }
{ "aliases": null, "definition": "A type of leukodystrophy characterized by multiple small cavitations typically in the periventricular and deep cerebral white matter. The cavitations are visible as a central cavity with cerebrospinal fluid-like signal intensity.", "id": "CavitatingLeukodystrophy", "label": "Cavitating leukodystrophy", "logical_definition": null, "original_id": "HP:0033369", "relationships": [ { "predicate": "subClassOf", "target": "Leukodystrophy" } ] }
0
{ "document": "Cavitating leukodystrophy A type of leukodystrophy characterized by multiple small cavitations typically in the periventricular and deep cerebral white matter. The cavitations are visible as a central cavity with cerebrospinal fluid-like signal intensity. [{'predicate': 'subClassOf', 'target': 'Leukodystrophy'}]" }
{ "aliases": null, "definition": "Thick-walled abnormal gas-filled interstitial mass within a lung with a diameter greater than 30 mm.", "id": "CavitatingPulmonaryMass", "label": "Cavitating pulmonary mass", "logical_definition": null, "original_id": "HP:0033831", "relationships": [ { "predicate": "subClassOf", "target": "PulmonaryCavity" }, { "predicate": "subClassOf", "target": "PulmonaryMass" } ] }
0
{ "document": "Cavitating pulmonary mass Thick-walled abnormal gas-filled interstitial mass within a lung with a diameter greater than 30 mm. [{'predicate': 'subClassOf', 'target': 'PulmonaryCavity'}, {'predicate': 'subClassOf', 'target': 'PulmonaryMass'}]" }
{ "aliases": null, "definition": "Thick-walled abnormal gas-filled interstitial nodule within a lung.", "id": "CavitatingPulmonaryNodule", "label": "Cavitating pulmonary nodule", "logical_definition": null, "original_id": "HP:0034015", "relationships": [ { "predicate": "subClassOf", "target": "PulmonaryCavity" } ] }
0
{ "document": "Cavitating pulmonary nodule Thick-walled abnormal gas-filled interstitial nodule within a lung. [{'predicate': 'subClassOf', 'target': 'PulmonaryCavity'}]" }
{ "aliases": null, "definition": "The formation of small cavities in the tissue of the basal ganglia.", "id": "CavitationOfTheBasalGanglia", "label": "Cavitation of the basal ganglia", "logical_definition": null, "original_id": "HP:0007007", "relationships": [ { "predicate": "subClassOf", "target": "AbnormalBasalGangliaMorphology" } ] }
0
{ "document": "Cavitation of the basal ganglia The formation of small cavities in the tissue of the basal ganglia. [{'predicate': 'subClassOf', 'target': 'AbnormalBasalGangliaMorphology'}]" }
{ "aliases": null, "definition": "An organ cavity that surrounded_by a bone.", "id": "CavityOfBoneOrgan", "label": "cavity of bone organ", "logical_definition": null, "original_id": "UBERON:0010527", "relationships": null }
0
{ "document": "cavity of bone organ An organ cavity that surrounded_by a bone. None" }
{ "aliases": null, "definition": null, "id": "CavityOfCardiacChamber", "label": "cavity of cardiac chamber", "logical_definition": null, "original_id": "UBERON:0035763", "relationships": [ { "predicate": "SurroundedBy", "target": "Endocardium" } ] }
0
{ "document": "cavity of cardiac chamber None [{'predicate': 'SurroundedBy', 'target': 'Endocardium'}]" }
{ "aliases": null, "definition": "Luminal space of the left atrium of the heart.", "id": "CavityOfLeftAtrium", "label": "cavity of left atrium", "logical_definition": null, "original_id": "UBERON:0016513", "relationships": null }
0
{ "document": "cavity of left atrium Luminal space of the left atrium of the heart. None" }
{ "aliases": null, "definition": "Luminal space of the left ventricle of the heart.", "id": "CavityOfLeftVentricle", "label": "cavity of left ventricle", "logical_definition": null, "original_id": "UBERON:0016514", "relationships": null }
0
{ "document": "cavity of left ventricle Luminal space of the left ventricle of the heart. None" }
{ "aliases": null, "definition": "An anatomical space that is enclosed by a pharynx.", "id": "CavityOfPharynx", "label": "cavity of pharynx", "logical_definition": null, "original_id": "UBERON:0001731", "relationships": [ { "predicate": "PartOf", "target": "DigestiveSystem" }, { "predicate": "PartOf", "target": "Pharynx" }, { "predicate": "DevelopsFrom", "target": "Foregut" } ] }
0
{ "document": "cavity of pharynx An anatomical space that is enclosed by a pharynx. [{'predicate': 'PartOf', 'target': 'DigestiveSystem'}, {'predicate': 'PartOf', 'target': 'Pharynx'}, {'predicate': 'DevelopsFrom', 'target': 'Foregut'}]" }
{ "aliases": null, "definition": "Luminal space of the right atrium of the heart.", "id": "CavityOfRightAtrium", "label": "cavity of right atrium", "logical_definition": null, "original_id": "UBERON:0016522", "relationships": null }
0
{ "document": "cavity of right atrium Luminal space of the right atrium of the heart. None" }
{ "aliases": null, "definition": "Luminal space of the right ventricle of the heart.", "id": "CavityOfRightVentricle", "label": "cavity of right ventricle", "logical_definition": null, "original_id": "UBERON:0016509", "relationships": null }
0
{ "document": "cavity of right ventricle Luminal space of the right ventricle of the heart. None" }
{ "aliases": null, "definition": "If the two laminae of the septum pellucidum are not fused then a fluid-filled space or cavum is present. The cavum septum pellucidum is present at birth but usually obliterates by the age of 3 to 6 months. It is up to 1cm in width and the walls are parallel. It is an enclosed space and is not part of the ventricular system or connected with the subarachnoid space.", "id": "CavumSeptumPellucidum", "label": "Cavum septum pellucidum", "logical_definition": null, "original_id": "HP:0002389", "relationships": [ { "predicate": "subClassOf", "target": "AbnormalSeptumPellucidumMorphology" } ] }
0
{ "document": "Cavum septum pellucidum If the two laminae of the septum pellucidum are not fused then a fluid-filled space or cavum is present. The cavum septum pellucidum is present at birth but usually obliterates by the age of 3 to 6 months. It is up to 1cm in width and the walls are parallel. It is an enclosed space and is not part of the ventricular system or connected with the subarachnoid space. [{'predicate': 'subClassOf', 'target': 'AbnormalSeptumPellucidumMorphology'}]" }
{ "aliases": null, "definition": "A space enclosed within the laminae of the septum pelludicum, the membranous partition that seperates the frontal horns of the ventricle. contains cerebrospinal fluid (CSF) that filters from the ventricles through the septal laminae. bounded anteriorly by the genu of the corpus callosum; superiorly by the body of the corpus callosum; posteriorly by the anterior limb and pillars of the fornix; inferiorly by the anterior commissure and the rostrum of the corpus callosum; and laterally by the leaflets of the septum pellucidum.", "id": "CavumSeptumPellucidum_UBERON:0009857", "label": "cavum septum pellucidum", "logical_definition": null, "original_id": "UBERON:0009857", "relationships": [ { "predicate": "PartOf", "target": "SeptumPellucidum" }, { "predicate": "AdjacentTo", "target": "LaminaOfSeptumPellucidum" } ] }
0
{ "document": "cavum septum pellucidum A space enclosed within the laminae of the septum pelludicum, the membranous partition that seperates the frontal horns of the ventricle. contains cerebrospinal fluid (CSF) that filters from the ventricles through the septal laminae. bounded anteriorly by the genu of the corpus callosum; superiorly by the body of the corpus callosum; posteriorly by the anterior limb and pillars of the fornix; inferiorly by the anterior commissure and the rostrum of the corpus callosum; and laterally by the leaflets of the septum pellucidum. [{'predicate': 'PartOf', 'target': 'SeptumPellucidum'}, {'predicate': 'AdjacentTo', 'target': 'LaminaOfSeptumPellucidum'}]" }
{ "aliases": null, "definition": "Cd4-negative, CD8_alpha-negative, CD11b-positive dendritic cell is a conventional dendritic cell that is CD11b-positive, CD4-negative, CD8_alpha-negative and is CD205-positive.", "id": "Cd4Negative_CD8AlphaNegative_CD11bPositiveDendriticCell", "label": "Cd4-negative, CD8_alpha-negative, CD11b-positive dendritic cell", "logical_definition": null, "original_id": "CL:0002454", "relationships": [ { "predicate": "subClassOf", "target": "CD11bPositiveDendriticCell" } ] }
0
{ "document": "Cd4-negative, CD8_alpha-negative, CD11b-positive dendritic cell Cd4-negative, CD8_alpha-negative, CD11b-positive dendritic cell is a conventional dendritic cell that is CD11b-positive, CD4-negative, CD8_alpha-negative and is CD205-positive. [{'predicate': 'subClassOf', 'target': 'CD11bPositiveDendriticCell'}]" }
{ "aliases": null, "definition": "The first major branch of the abdominal aorta.", "id": "CeliacArtery", "label": "celiac artery", "logical_definition": null, "original_id": "UBERON:0001640", "relationships": [ { "predicate": "BranchingPartOf", "target": "AbdominalAorta" }, { "predicate": "IndirectlySupplies", "target": "Intestine" }, { "predicate": "IndirectlySupplies", "target": "Stomach" }, { "predicate": "IndirectlySupplies", "target": "Spleen" }, { "predicate": "IndirectlySupplies", "target": "Liver" }, { "predicate": "subClassOf", "target": "SystemicArtery" } ] }
0
{ "document": "celiac artery The first major branch of the abdominal aorta. [{'predicate': 'BranchingPartOf', 'target': 'AbdominalAorta'}, {'predicate': 'IndirectlySupplies', 'target': 'Intestine'}, {'predicate': 'IndirectlySupplies', 'target': 'Stomach'}, {'predicate': 'IndirectlySupplies', 'target': 'Spleen'}, {'predicate': 'IndirectlySupplies', 'target': 'Liver'}, {'predicate': 'subClassOf', 'target': 'SystemicArtery'}]" }
{ "aliases": null, "definition": "Compression of the celiac artery.", "id": "CeliacArteryCompression", "label": "Celiac artery compression", "logical_definition": null, "original_id": "HP:0012327", "relationships": [ { "predicate": "subClassOf", "target": "AbnormalCeliacArteryMorphology" } ] }
0
{ "document": "Celiac artery compression Compression of the celiac artery. [{'predicate': 'subClassOf', 'target': 'AbnormalCeliacArteryMorphology'}]" }
{ "aliases": null, "definition": "A separation (dissection) of the layers of the celiac artery wall.", "id": "CeliacArteryDissection", "label": "Celiac artery dissection", "logical_definition": null, "original_id": "HP:0033982", "relationships": [ { "predicate": "subClassOf", "target": "AbnormalCeliacArteryMorphology" } ] }
0
{ "document": "Celiac artery dissection A separation (dissection) of the layers of the celiac artery wall. [{'predicate': 'subClassOf', 'target': 'AbnormalCeliacArteryMorphology'}]" }
{ "aliases": null, "definition": "Celiac disease (CD) is an autoimmune condition affecting the small intestine, triggered by the ingestion of gluten, the protein fraction of wheat, barley, and rye. Clinical manifestations of CD are highly variable and include both gastrointestinal and non-gastrointestinal features. The hallmark of CD is an immune-mediated enteropathy. This term is included because the occurence of CD is seen as a feature of a number of other diseases.", "id": "CeliacDisease", "label": "Celiac disease", "logical_definition": null, "original_id": "HP:0002608", "relationships": [ { "predicate": "subClassOf", "target": "AbnormalSmallIntestineMorphology" }, { "predicate": "subClassOf", "target": "ImmunologicHypersensitivity" } ] }
0
{ "document": "Celiac disease Celiac disease (CD) is an autoimmune condition affecting the small intestine, triggered by the ingestion of gluten, the protein fraction of wheat, barley, and rye. Clinical manifestations of CD are highly variable and include both gastrointestinal and non-gastrointestinal features. The hallmark of CD is an immune-mediated enteropathy. This term is included because the occurence of CD is seen as a feature of a number of other diseases. [{'predicate': 'subClassOf', 'target': 'AbnormalSmallIntestineMorphology'}, {'predicate': 'subClassOf', 'target': 'ImmunologicHypersensitivity'}]" }
{ "aliases": null, "definition": "A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane.", "id": "Cell", "label": "cell", "logical_definition": null, "original_id": "CL:0000000", "relationships": [ { "predicate": "subClassOf", "target": "AnatomicalStructure" } ] }
0
{ "document": "cell A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane. [{'predicate': 'subClassOf', 'target': 'AnatomicalStructure'}]" }
{ "aliases": null, "definition": "A multicellular organismal process by which exposure to an activating factor such as a cellular or soluble ligand results in a change in the morphology or behavior of a cell.", "id": "CellActivation", "label": "cell activation", "logical_definition": null, "original_id": "GO:0001775", "relationships": [ { "predicate": "subClassOf", "target": "CellularProcess" }, { "predicate": "subClassOf", "target": "MulticellularOrganismalProcess" } ] }
0
{ "document": "cell activation A multicellular organismal process by which exposure to an activating factor such as a cellular or soluble ligand results in a change in the morphology or behavior of a cell. [{'predicate': 'subClassOf', 'target': 'CellularProcess'}, {'predicate': 'subClassOf', 'target': 'MulticellularOrganismalProcess'}]" }
{ "aliases": null, "definition": "A change in the morphology or behavior of a cell resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an immune response.", "id": "CellActivationInvolvedInImmuneResponse", "label": "cell activation involved in immune response", "logical_definition": null, "original_id": "GO:0002263", "relationships": [ { "predicate": "PartOf", "target": "ImmuneResponse" }, { "predicate": "subClassOf", "target": "CellActivation" }, { "predicate": "subClassOf", "target": "ImmuneEffectorProcess" } ] }
0
{ "document": "cell activation involved in immune response A change in the morphology or behavior of a cell resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an immune response. [{'predicate': 'PartOf', 'target': 'ImmuneResponse'}, {'predicate': 'subClassOf', 'target': 'CellActivation'}, {'predicate': 'subClassOf', 'target': 'ImmuneEffectorProcess'}]" }
{ "aliases": null, "definition": "The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.", "id": "CellAdhesion", "label": "cell adhesion", "logical_definition": null, "original_id": "GO:0007155", "relationships": [ { "predicate": "subClassOf", "target": "CellularProcess" } ] }
0
{ "document": "cell adhesion The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules. [{'predicate': 'subClassOf', 'target': 'CellularProcess'}]" }
{ "aliases": null, "definition": "The sum of morphological and functional disturbances induced by cell and tissue damage, either from intrinsic gene dysfunction or as a result of external factors.", "id": "CellAndTissueDamage", "label": "cell and tissue damage", "logical_definition": null, "original_id": "MPATH:1", "relationships": [ { "predicate": "subClassOf", "target": "PathologicalAnatomicalEntity" } ] }
0
{ "document": "cell and tissue damage The sum of morphological and functional disturbances induced by cell and tissue damage, either from intrinsic gene dysfunction or as a result of external factors. [{'predicate': 'subClassOf', 'target': 'PathologicalAnatomicalEntity'}]" }
{ "aliases": null, "definition": "Processes occurring during cell and tissue damage of either intrinsic or extrinsic etiology.", "id": "CellAndTissueDamageProcess", "label": "cell and tissue damage process", "logical_definition": null, "original_id": "MPATH:597", "relationships": [ { "predicate": "subClassOf", "target": "PathologicalProcess" } ] }
0
{ "document": "cell and tissue damage process Processes occurring during cell and tissue damage of either intrinsic or extrinsic etiology. [{'predicate': 'subClassOf', 'target': 'PathologicalProcess'}]" }
{ "aliases": null, "definition": "The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections.", "id": "CellBody", "label": "cell body", "logical_definition": null, "original_id": "GO:0044297", "relationships": [ { "predicate": "subClassOf", "target": "CellularAnatomicalEntity" } ] }
0
{ "document": "cell body The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections. [{'predicate': 'subClassOf', 'target': 'CellularAnatomicalEntity'}]" }
{ "aliases": null, "definition": "The attachment of one cell to another cell via adhesion molecules.", "id": "CellCellAdhesion", "label": "cell-cell adhesion", "logical_definition": null, "original_id": "GO:0098609", "relationships": [ { "predicate": "subClassOf", "target": "CellAdhesion" } ] }
0
{ "document": "cell-cell adhesion The attachment of one cell to another cell via adhesion molecules. [{'predicate': 'subClassOf', 'target': 'CellAdhesion'}]" }
{ "aliases": null, "definition": "A cell junction that forms a connection between two or more cells of an organism; excludes direct cytoplasmic intercellular bridges, such as ring canals in insects.", "id": "CellCellJunction", "label": "cell-cell junction", "logical_definition": null, "original_id": "GO:0005911", "relationships": [ { "predicate": "subClassOf", "target": "AnchoringJunction" } ] }
0
{ "document": "cell-cell junction A cell junction that forms a connection between two or more cells of an organism; excludes direct cytoplasmic intercellular bridges, such as ring canals in insects. [{'predicate': 'subClassOf', 'target': 'AnchoringJunction'}]" }
{ "aliases": null, "definition": "Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.", "id": "CellCellSignaling", "label": "cell-cell signaling", "logical_definition": null, "original_id": "GO:0007267", "relationships": [ { "predicate": "subClassOf", "target": "CellCommunication" }, { "predicate": "subClassOf", "target": "Signaling" } ] }
0
{ "document": "cell-cell signaling Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions. [{'predicate': 'subClassOf', 'target': 'CellCommunication'}, {'predicate': 'subClassOf', 'target': 'Signaling'}]" }
{ "aliases": null, "definition": "Any process that mediates the transfer of information from one cell to another and contributes to the progression of the lung, from its initial state to the mature structure.", "id": "CellCellSignalingInvolvedInLungDevelopment", "label": "cell-cell signaling involved in lung development", "logical_definition": null, "original_id": "GO:0060495", "relationships": [ { "predicate": "PartOf", "target": "LungDevelopment" }, { "predicate": "subClassOf", "target": "CellCellSignaling" } ] }
0
{ "document": "cell-cell signaling involved in lung development Any process that mediates the transfer of information from one cell to another and contributes to the progression of the lung, from its initial state to the mature structure. [{'predicate': 'PartOf', 'target': 'LungDevelopment'}, {'predicate': 'subClassOf', 'target': 'CellCellSignaling'}]" }
{ "aliases": null, "definition": "Any process that mediates the transfer of information from one cell to another and contributes to the progression of the mammary gland, from its initial state to the mature structure.", "id": "CellCellSignalingInvolvedInMammaryGlandDevelopment", "label": "cell-cell signaling involved in mammary gland development", "logical_definition": null, "original_id": "GO:0060764", "relationships": [ { "predicate": "PartOf", "target": "MammaryGlandDevelopment" }, { "predicate": "subClassOf", "target": "CellCellSignaling" } ] }
0
{ "document": "cell-cell signaling involved in mammary gland development Any process that mediates the transfer of information from one cell to another and contributes to the progression of the mammary gland, from its initial state to the mature structure. [{'predicate': 'PartOf', 'target': 'MammaryGlandDevelopment'}, {'predicate': 'subClassOf', 'target': 'CellCellSignaling'}]" }
{ "aliases": null, "definition": "The directed movement of a motile cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).", "id": "CellChemotaxis", "label": "cell chemotaxis", "logical_definition": null, "original_id": "GO:0060326", "relationships": [ { "predicate": "PartOf", "target": "CellularResponseToChemicalStimulus" }, { "predicate": "subClassOf", "target": "Chemotaxis" }, { "predicate": "subClassOf", "target": "CellMigration" } ] }
0
{ "document": "cell chemotaxis The directed movement of a motile cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis). [{'predicate': 'PartOf', 'target': 'CellularResponseToChemicalStimulus'}, {'predicate': 'subClassOf', 'target': 'Chemotaxis'}, {'predicate': 'subClassOf', 'target': 'CellMigration'}]" }
{ "aliases": null, "definition": "A cluster of cells, largely surrounded by a morphological boundary.", "id": "CellCluster", "label": "cell cluster", "logical_definition": null, "original_id": "UBERON:0034922", "relationships": [ { "predicate": "SurroundedBy", "target": "NonMaterialAnatomicalBoundary" }, { "predicate": "subClassOf", "target": "MulticellularAnatomicalStructure" } ] }
0
{ "document": "cell cluster A cluster of cells, largely surrounded by a morphological boundary. [{'predicate': 'SurroundedBy', 'target': 'NonMaterialAnatomicalBoundary'}, {'predicate': 'subClassOf', 'target': 'MulticellularAnatomicalStructure'}]" }
{ "aliases": null, "definition": "Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.", "id": "CellCommunication", "label": "cell communication", "logical_definition": null, "original_id": "GO:0007154", "relationships": [ { "predicate": "subClassOf", "target": "CellularProcess" } ] }
0
{ "document": "cell communication Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. [{'predicate': 'subClassOf', 'target': 'CellularProcess'}]" }
{ "aliases": null, "definition": "Anatomical structure that is an aggregation of similar cells from which cartilages and bones form, and from which chondrogenesis and osteogenesis are initiated during repair and/or regeneration. (Hall and Miyake 1995).", "id": "CellCondensation", "label": "cell condensation", "logical_definition": null, "original_id": "UBERON:0011585", "relationships": [ { "predicate": "subClassOf", "target": "AnatomicalStructure" } ] }
0
{ "document": "cell condensation Anatomical structure that is an aggregation of similar cells from which cartilages and bones form, and from which chondrogenesis and osteogenesis are initiated during repair and/or regeneration. (Hall and Miyake 1995). [{'predicate': 'subClassOf', 'target': 'AnatomicalStructure'}]" }
{ "aliases": null, "definition": "The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.", "id": "CellCortex", "label": "cell cortex", "logical_definition": null, "original_id": "GO:0005938", "relationships": [ { "predicate": "PartOf", "target": "CellPeriphery" }, { "predicate": "subClassOf", "target": "Cytoplasm" } ] }
0
{ "document": "cell cortex The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins. [{'predicate': 'PartOf', 'target': 'CellPeriphery'}, {'predicate': 'subClassOf', 'target': 'Cytoplasm'}]" }
{ "aliases": null, "definition": "The complete extent of cell cortex that underlies some some region of the plasma membrane.", "id": "CellCortexRegion", "label": "cell cortex region", "logical_definition": null, "original_id": "GO:0099738", "relationships": [ { "predicate": "PartOf", "target": "CellCortex" }, { "predicate": "subClassOf", "target": "CellCortex" }, { "predicate": "subClassOf", "target": "CytoplasmicRegion" } ] }
0
{ "document": "cell cortex region The complete extent of cell cortex that underlies some some region of the plasma membrane. [{'predicate': 'PartOf', 'target': 'CellCortex'}, {'predicate': 'subClassOf', 'target': 'CellCortex'}, {'predicate': 'subClassOf', 'target': 'CytoplasmicRegion'}]" }
{ "aliases": null, "definition": "The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.", "id": "CellCycle", "label": "cell cycle", "logical_definition": null, "original_id": "GO:0007049", "relationships": [ { "predicate": "subClassOf", "target": "CellularProcess" } ] }
0
{ "document": "cell cycle The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division. [{'predicate': 'subClassOf', 'target': 'CellularProcess'}]" }
{ "aliases": null, "definition": "One of the distinct periods or stages into which the cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.", "id": "CellCyclePhase", "label": "cell cycle phase", "logical_definition": null, "original_id": "GO:0022403", "relationships": [ { "predicate": "subClassOf", "target": "BiologicalPhase" } ] }
0
{ "document": "cell cycle phase One of the distinct periods or stages into which the cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events. [{'predicate': 'subClassOf', 'target': 'BiologicalPhase'}]" }
{ "aliases": null, "definition": "The cellular process that ensures successive accurate and complete genome replication and chromosome segregation.", "id": "CellCycleProcess", "label": "cell cycle process", "logical_definition": null, "original_id": "GO:0022402", "relationships": [ { "predicate": "PartOf", "target": "CellCycle" }, { "predicate": "subClassOf", "target": "CellularProcess" } ] }
0
{ "document": "cell cycle process The cellular process that ensures successive accurate and complete genome replication and chromosome segregation. [{'predicate': 'PartOf', 'target': 'CellCycle'}, {'predicate': 'subClassOf', 'target': 'CellularProcess'}]" }
{ "aliases": null, "definition": "Any biological process that results in permanent cessation of all vital functions of a cell. A cell should be considered dead when any one of the following molecular or morphological criteria is met: (1) the cell has lost the integrity of its plasma membrane; (2) the cell, including its nucleus, has undergone complete fragmentation into discrete bodies (frequently referred to as apoptotic bodies). The cell corpse (or its fragments) may be engulfed by an adjacent cell in vivo, but engulfment of whole cells should not be considered a strict criteria to define cell death as, under some circumstances, live engulfed cells can be released from phagosomes (see PMID:18045538).", "id": "CellDeath", "label": "cell death", "logical_definition": null, "original_id": "GO:0008219", "relationships": [ { "predicate": "subClassOf", "target": "CellularProcess" } ] }
0
{ "document": "cell death Any biological process that results in permanent cessation of all vital functions of a cell. A cell should be considered dead when any one of the following molecular or morphological criteria is met: (1) the cell has lost the integrity of its plasma membrane; (2) the cell, including its nucleus, has undergone complete fragmentation into discrete bodies (frequently referred to as apoptotic bodies). The cell corpse (or its fragments) may be engulfed by an adjacent cell in vivo, but engulfment of whole cells should not be considered a strict criteria to define cell death as, under some circumstances, live engulfed cells can be released from phagosomes (see PMID:18045538). [{'predicate': 'subClassOf', 'target': 'CellularProcess'}]" }
{ "aliases": null, "definition": "The cellular developmental process in which a specific cell progresses from an immature to a mature state. Cell development start once cell commitment has taken place.", "id": "CellDevelopment", "label": "cell development", "logical_definition": null, "original_id": "GO:0048468", "relationships": [ { "predicate": "PartOf", "target": "CellDifferentiation" }, { "predicate": "subClassOf", "target": "AnatomicalStructureDevelopment" }, { "predicate": "subClassOf", "target": "CellularDevelopmentalProcess" } ] }
0
{ "document": "cell development The cellular developmental process in which a specific cell progresses from an immature to a mature state. Cell development start once cell commitment has taken place. [{'predicate': 'PartOf', 'target': 'CellDifferentiation'}, {'predicate': 'subClassOf', 'target': 'AnatomicalStructureDevelopment'}, {'predicate': 'subClassOf', 'target': 'CellularDevelopmentalProcess'}]" }
{ "aliases": null, "definition": "The cellular developmental process in which a relatively unspecialized cell, e.g. embryonic or regenerative cell, acquires specialized structural and/or functional features that characterize a specific cell. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.", "id": "CellDifferentiation", "label": "cell differentiation", "logical_definition": null, "original_id": "GO:0030154", "relationships": [ { "predicate": "subClassOf", "target": "CellularDevelopmentalProcess" } ] }
0
{ "document": "cell differentiation The cellular developmental process in which a relatively unspecialized cell, e.g. embryonic or regenerative cell, acquires specialized structural and/or functional features that characterize a specific cell. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state. [{'predicate': 'subClassOf', 'target': 'CellularDevelopmentalProcess'}]" }
{ "aliases": null, "definition": "The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells.", "id": "CellDivision", "label": "cell division", "logical_definition": null, "original_id": "GO:0051301", "relationships": [ { "predicate": "subClassOf", "target": "CellularProcess" } ] }
0
{ "document": "cell division The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells. [{'predicate': 'subClassOf', 'target': 'CellularProcess'}]" }
{ "aliases": null, "definition": "The process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.", "id": "CellGrowth", "label": "cell growth", "logical_definition": null, "original_id": "GO:0016049", "relationships": [ { "predicate": "subClassOf", "target": "CellularProcess" }, { "predicate": "subClassOf", "target": "Growth" } ] }
0
{ "document": "cell growth The process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present. [{'predicate': 'subClassOf', 'target': 'CellularProcess'}, {'predicate': 'subClassOf', 'target': 'Growth'}]" }
{ "aliases": null, "definition": "A long, thin cell projection that contains F-actin and tubulin, with microtubules centrally located and F-actin peripherally located.", "id": "CellHair", "label": "cell hair", "logical_definition": null, "original_id": "GO:0070451", "relationships": [ { "predicate": "subClassOf", "target": "PlasmaMembraneBoundedCellProjection" } ] }
0
{ "document": "cell hair A long, thin cell projection that contains F-actin and tubulin, with microtubules centrally located and F-actin peripherally located. [{'predicate': 'subClassOf', 'target': 'PlasmaMembraneBoundedCellProjection'}]" }
{ "aliases": null, "definition": "A cellular component that forms a specialized region of connection between two or more cells, or between a cell and the extracellular matrix, or between two membrane-bound components of a cell, such as flagella.", "id": "CellJunction", "label": "cell junction", "logical_definition": null, "original_id": "GO:0030054", "relationships": [ { "predicate": "subClassOf", "target": "CellularAnatomicalEntity" } ] }
0
{ "document": "cell junction A cellular component that forms a specialized region of connection between two or more cells, or between a cell and the extracellular matrix, or between two membrane-bound components of a cell, such as flagella. [{'predicate': 'subClassOf', 'target': 'CellularAnatomicalEntity'}]" }
{ "aliases": null, "definition": "Any process in an organism that results in the killing of its own cells or those of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.", "id": "CellKilling", "label": "cell killing", "logical_definition": null, "original_id": "GO:0001906", "relationships": [ { "predicate": "subClassOf", "target": "CellularProcess" } ] }
0
{ "document": "cell killing Any process in an organism that results in the killing of its own cells or those of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions. [{'predicate': 'subClassOf', 'target': 'CellularProcess'}]" }
{ "aliases": null, "definition": "Portion of tissue, that consists of single layer of cells connected to each other by cell junctions. Examples: layer of glial cells; epithelium.", "id": "CellLayer", "label": "cell layer", "logical_definition": null, "original_id": "UBERON:0000119", "relationships": [ { "predicate": "HasQuality", "target": "Laminar" }, { "predicate": "subClassOf", "target": "Tissue" } ] }
0
{ "document": "cell layer Portion of tissue, that consists of single layer of cells connected to each other by cell junctions. Examples: layer of glial cells; epithelium. [{'predicate': 'HasQuality', 'target': 'Laminar'}, {'predicate': 'subClassOf', 'target': 'Tissue'}]" }
{ "aliases": null, "definition": "The cellular developmental process, independent of morphogenetic (shape) change, that is required for a specific cell to attain its fully functional state.", "id": "CellMaturation", "label": "cell maturation", "logical_definition": null, "original_id": "GO:0048469", "relationships": [ { "predicate": "PartOf", "target": "CellDevelopment" }, { "predicate": "subClassOf", "target": "CellularDevelopmentalProcess" }, { "predicate": "subClassOf", "target": "AnatomicalStructureMaturation" } ] }
0
{ "document": "cell maturation The cellular developmental process, independent of morphogenetic (shape) change, that is required for a specific cell to attain its fully functional state. [{'predicate': 'PartOf', 'target': 'CellDevelopment'}, {'predicate': 'subClassOf', 'target': 'CellularDevelopmentalProcess'}, {'predicate': 'subClassOf', 'target': 'AnatomicalStructureMaturation'}]" }
{ "aliases": null, "definition": "The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues.", "id": "CellMigration", "label": "cell migration", "logical_definition": null, "original_id": "GO:0016477", "relationships": [ { "predicate": "subClassOf", "target": "CellMotility" } ] }
0
{ "document": "cell migration The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues. [{'predicate': 'subClassOf', 'target': 'CellMotility'}]" }
{ "aliases": null, "definition": "The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression).", "id": "CellMigrationInvolvedInGastrulation", "label": "cell migration involved in gastrulation", "logical_definition": null, "original_id": "GO:0042074", "relationships": [ { "predicate": "PartOf", "target": "Gastrulation" }, { "predicate": "subClassOf", "target": "AmeboidalTypeCellMigration" } ] }
0
{ "document": "cell migration involved in gastrulation The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression). [{'predicate': 'PartOf', 'target': 'Gastrulation'}, {'predicate': 'subClassOf', 'target': 'AmeboidalTypeCellMigration'}]" }
{ "aliases": null, "definition": "A quality of a single cell inhering in the bearer by virtue of the bearer's size or shape or structure.", "id": "CellMorphology", "label": "cell morphology", "logical_definition": null, "original_id": "PATO:0010006", "relationships": [ { "predicate": "subClassOf", "target": "Morphology" } ] }
0
{ "document": "cell morphology A quality of a single cell inhering in the bearer by virtue of the bearer's size or shape or structure. [{'predicate': 'subClassOf', 'target': 'Morphology'}]" }
{ "aliases": null, "definition": "Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another.", "id": "CellMotility", "label": "cell motility", "logical_definition": null, "original_id": "GO:0048870", "relationships": [ { "predicate": "subClassOf", "target": "CellularProcess" } ] }
0
{ "document": "cell motility Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another. [{'predicate': 'subClassOf', 'target': 'CellularProcess'}]" }
{ "aliases": null, "definition": "A somatic cell located in skeletal muscle.", "id": "CellOfSkeletalMuscle", "label": "cell of skeletal muscle", "logical_definition": null, "original_id": "CL:0000188", "relationships": [ { "predicate": "subClassOf", "target": "AnimalCell" } ] }
0
{ "document": "cell of skeletal muscle A somatic cell located in skeletal muscle. [{'predicate': 'subClassOf', 'target': 'AnimalCell'}]" }
{ "aliases": null, "definition": "The broad region around and including the plasma membrane of a cell, encompassing the cell cortex (inside the cell), the plasma membrane, and any external encapsulating structures.", "id": "CellPeriphery", "label": "cell periphery", "logical_definition": null, "original_id": "GO:0071944", "relationships": [ { "predicate": "subClassOf", "target": "CellularAnatomicalEntity" } ] }
0
{ "document": "cell periphery The broad region around and including the plasma membrane of a cell, encompassing the cell cortex (inside the cell), the plasma membrane, and any external encapsulating structures. [{'predicate': 'subClassOf', 'target': 'CellularAnatomicalEntity'}]" }
{ "aliases": null, "definition": "The multiplication or reproduction of cells, resulting in the expansion of a cell population.", "id": "CellPopulationProliferation", "label": "cell population proliferation", "logical_definition": null, "original_id": "GO:0008283", "relationships": [ { "predicate": "subClassOf", "target": "CellularProcess" } ] }
0
{ "document": "cell population proliferation The multiplication or reproduction of cells, resulting in the expansion of a cell population. [{'predicate': 'subClassOf', 'target': 'CellularProcess'}]" }
{ "aliases": null, "definition": "A prolongation or process extending from a cell, e.g. a flagellum or axon.", "id": "CellProjection", "label": "cell projection", "logical_definition": null, "original_id": "GO:0042995", "relationships": [ { "predicate": "subClassOf", "target": "CellularAnatomicalEntity" } ] }
0
{ "document": "cell projection A prolongation or process extending from a cell, e.g. a flagellum or axon. [{'predicate': 'subClassOf', 'target': 'CellularAnatomicalEntity'}]" }
{ "aliases": null, "definition": "Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon.", "id": "CellProjectionAssembly", "label": "cell projection assembly", "logical_definition": null, "original_id": "GO:0030031", "relationships": [ { "predicate": "subClassOf", "target": "CellularComponentAssembly" }, { "predicate": "subClassOf", "target": "CellProjectionOrganization" } ] }
0
{ "document": "cell projection assembly Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon. [{'predicate': 'subClassOf', 'target': 'CellularComponentAssembly'}, {'predicate': 'subClassOf', 'target': 'CellProjectionOrganization'}]" }
{ "aliases": null, "definition": "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon.", "id": "CellProjectionOrganization", "label": "cell projection organization", "logical_definition": null, "original_id": "GO:0030030", "relationships": [ { "predicate": "subClassOf", "target": "CellularComponentOrganization" } ] }
0
{ "document": "cell projection organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon. [{'predicate': 'subClassOf', 'target': 'CellularComponentOrganization'}]" }
{ "aliases": null, "definition": "A protein that is a translation product of the mouse Cd200r3 gene or a 1:1 ortholog thereof.", "id": "CellSurfaceGlycoproteinCD200Receptor3", "label": "cell surface glycoprotein CD200 receptor 3", "logical_definition": null, "original_id": "PR:000006169", "relationships": [ { "predicate": "subClassOf", "target": "Protein_PR:000000001" } ] }
0
{ "document": "cell surface glycoprotein CD200 receptor 3 A protein that is a translation product of the mouse Cd200r3 gene or a 1:1 ortholog thereof. [{'predicate': 'subClassOf', 'target': 'Protein_PR:000000001'}]" }
{ "aliases": null, "definition": "The series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription.", "id": "CellSurfaceReceptorSignalingPathway", "label": "cell surface receptor signaling pathway", "logical_definition": null, "original_id": "GO:0007166", "relationships": [ { "predicate": "subClassOf", "target": "SignalTransduction" } ] }
0
{ "document": "cell surface receptor signaling pathway The series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription. [{'predicate': 'subClassOf', 'target': 'SignalTransduction'}]" }
{ "aliases": null, "definition": "Any cell surface receptor signaling pathway that is involved in cell-cell signaling.", "id": "CellSurfaceReceptorSignalingPathwayInvolvedInCellCellSignaling", "label": "cell surface receptor signaling pathway involved in cell-cell signaling", "logical_definition": null, "original_id": "GO:1905114", "relationships": [ { "predicate": "PartOf", "target": "CellCellSignaling" }, { "predicate": "subClassOf", "target": "CellSurfaceReceptorSignalingPathway" } ] }
0
{ "document": "cell surface receptor signaling pathway involved in cell-cell signaling Any cell surface receptor signaling pathway that is involved in cell-cell signaling. [{'predicate': 'PartOf', 'target': 'CellCellSignaling'}, {'predicate': 'subClassOf', 'target': 'CellSurfaceReceptorSignalingPathway'}]" }
{ "aliases": null, "definition": "The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells.", "id": "CellularAldehydeMetabolicProcess", "label": "cellular aldehyde metabolic process", "logical_definition": null, "original_id": "GO:0006081", "relationships": [ { "predicate": "subClassOf", "target": "CellularMetabolicProcess" }, { "predicate": "subClassOf", "target": "OrganicSubstanceMetabolicProcess" } ] }
0
{ "document": "cellular aldehyde metabolic process The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells. [{'predicate': 'subClassOf', 'target': 'CellularMetabolicProcess'}, {'predicate': 'subClassOf', 'target': 'OrganicSubstanceMetabolicProcess'}]" }
{ "aliases": null, "definition": "A part of a cellular organism that is either an immaterial entity or a material entity with granularity above the level of a protein complex but below that of an anatomical system. Or, a substance produced by a cellular organism with granularity above the level of a protein complex.", "id": "CellularAnatomicalEntity", "label": "cellular anatomical entity", "logical_definition": null, "original_id": "GO:0110165", "relationships": [ { "predicate": "subClassOf", "target": "CellularComponent" } ] }
0
{ "document": "cellular anatomical entity A part of a cellular organism that is either an immaterial entity or a material entity with granularity above the level of a protein complex but below that of an anatomical system. Or, a substance produced by a cellular organism with granularity above the level of a protein complex. [{'predicate': 'subClassOf', 'target': 'CellularComponent'}]" }
{ "aliases": null, "definition": "The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.", "id": "CellularAromaticCompoundMetabolicProcess", "label": "cellular aromatic compound metabolic process", "logical_definition": null, "original_id": "GO:0006725", "relationships": [ { "predicate": "subClassOf", "target": "CellularMetabolicProcess" } ] }
0
{ "document": "cellular aromatic compound metabolic process The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells. [{'predicate': 'subClassOf', 'target': 'CellularMetabolicProcess'}]" }
{ "aliases": null, "definition": "The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.", "id": "CellularBiosyntheticProcess", "label": "cellular biosynthetic process", "logical_definition": null, "original_id": "GO:0044249", "relationships": [ { "predicate": "subClassOf", "target": "BiosyntheticProcess" }, { "predicate": "subClassOf", "target": "CellularMetabolicProcess" } ] }
0
{ "document": "cellular biosynthetic process The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells. [{'predicate': 'subClassOf', 'target': 'BiosyntheticProcess'}, {'predicate': 'subClassOf', 'target': 'CellularMetabolicProcess'}]" }
{ "aliases": null, "definition": "The chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.", "id": "CellularCatabolicProcess", "label": "cellular catabolic process", "logical_definition": null, "original_id": "GO:0044248", "relationships": [ { "predicate": "subClassOf", "target": "CatabolicProcess" }, { "predicate": "subClassOf", "target": "CellularMetabolicProcess" } ] }
0
{ "document": "cellular catabolic process The chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells. [{'predicate': 'subClassOf', 'target': 'CatabolicProcess'}, {'predicate': 'subClassOf', 'target': 'CellularMetabolicProcess'}]" }
{ "aliases": null, "definition": "A location, relative to cellular compartments and structures, occupied by a macromolecular machine when it carries out a molecular function. There are two ways in which the gene ontology describes locations of gene products: (1) relative to cellular structures (e.g., cytoplasmic side of plasma membrane) or compartments (e.g., mitochondrion), and (2) the stable macromolecular complexes of which they are parts (e.g., the ribosome).", "id": "CellularComponent", "label": "cellular_component", "logical_definition": null, "original_id": "GO:0005575", "relationships": null }
0
{ "document": "cellular_component A location, relative to cellular compartments and structures, occupied by a macromolecular machine when it carries out a molecular function. There are two ways in which the gene ontology describes locations of gene products: (1) relative to cellular structures (e.g., cytoplasmic side of plasma membrane) or compartments (e.g., mitochondrion), and (2) the stable macromolecular complexes of which they are parts (e.g., the ribosome). None" }
{ "aliases": null, "definition": "The aggregation, arrangement and bonding together of a cellular component.", "id": "CellularComponentAssembly", "label": "cellular component assembly", "logical_definition": null, "original_id": "GO:0022607", "relationships": [ { "predicate": "PartOf", "target": "CellularComponentBiogenesis" }, { "predicate": "subClassOf", "target": "CellularComponentOrganization" } ] }
0
{ "document": "cellular component assembly The aggregation, arrangement and bonding together of a cellular component. [{'predicate': 'PartOf', 'target': 'CellularComponentBiogenesis'}, {'predicate': 'subClassOf', 'target': 'CellularComponentOrganization'}]" }
{ "aliases": null, "definition": "The cellular component assembly that is part of the initial shaping of the component during its developmental progression.", "id": "CellularComponentAssemblyInvolvedInMorphogenesis", "label": "cellular component assembly involved in morphogenesis", "logical_definition": null, "original_id": "GO:0010927", "relationships": [ { "predicate": "PartOf", "target": "CellularComponentMorphogenesis" }, { "predicate": "subClassOf", "target": "CellularComponentAssembly" }, { "predicate": "subClassOf", "target": "AnatomicalStructureFormationInvolvedInMorphogenesis" } ] }
0
{ "document": "cellular component assembly involved in morphogenesis The cellular component assembly that is part of the initial shaping of the component during its developmental progression. [{'predicate': 'PartOf', 'target': 'CellularComponentMorphogenesis'}, {'predicate': 'subClassOf', 'target': 'CellularComponentAssembly'}, {'predicate': 'subClassOf', 'target': 'AnatomicalStructureFormationInvolvedInMorphogenesis'}]" }
{ "aliases": null, "definition": "A process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. Includes biosynthesis of constituent macromolecules, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component.", "id": "CellularComponentBiogenesis", "label": "cellular component biogenesis", "logical_definition": null, "original_id": "GO:0044085", "relationships": [ { "predicate": "subClassOf", "target": "CellularComponentOrganizationOrBiogenesis" } ] }
0
{ "document": "cellular component biogenesis A process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. Includes biosynthesis of constituent macromolecules, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component. [{'predicate': 'subClassOf', 'target': 'CellularComponentOrganizationOrBiogenesis'}]" }
{ "aliases": null, "definition": "A cellular process that results in the breakdown of a cellular component.", "id": "CellularComponentDisassembly", "label": "cellular component disassembly", "logical_definition": null, "original_id": "GO:0022411", "relationships": [ { "predicate": "subClassOf", "target": "CellularComponentOrganization" } ] }
0
{ "document": "cellular component disassembly A cellular process that results in the breakdown of a cellular component. [{'predicate': 'subClassOf', 'target': 'CellularComponentOrganization'}]" }
{ "aliases": null, "definition": "The breakdown of structures such as organelles, proteins, or other macromolecular structures during apoptosis.", "id": "CellularComponentDisassemblyInvolvedInExecutionPhaseOfApoptosis", "label": "cellular component disassembly involved in execution phase of apoptosis", "logical_definition": null, "original_id": "GO:0006921", "relationships": [ { "predicate": "PartOf", "target": "ExecutionPhaseOfApoptosis" }, { "predicate": "subClassOf", "target": "CellularComponentDisassembly" } ] }
0
{ "document": "cellular component disassembly involved in execution phase of apoptosis The breakdown of structures such as organelles, proteins, or other macromolecular structures during apoptosis. [{'predicate': 'PartOf', 'target': 'ExecutionPhaseOfApoptosis'}, {'predicate': 'subClassOf', 'target': 'CellularComponentDisassembly'}]" }